Cucsat.G15429 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15429
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationctg2009: 4668563 .. 4681571 (-)
RNA-Seq ExpressionCucsat.G15429
SyntenyCucsat.G15429
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAGTGATTTGGGGTGTTTTCTTATTTTCTGCATCTTAACTACCTTATTTGCTGCATCTTAATTGCTAACGATTTAGGGATCATAAGCCTTGTCCTCTTTGTTGAAAAAAAAGTGGTTGTTTGAAAGAGGAATTACTATTACTATTACGTCAAATTACATATTAAATGAAAAAGAAAATTACAATTTCTTTTAGCGCTATGTAATGGTAGTCAGGTATAGTAGTCATGCCTTTGCTCTAGCTTATATATTCATGTCTATGTTACTTTCACACTTCTATTTATTAATTTCATGAAGTCAGTGGGTTTGAAAAATGAAAGAATCGTCATCTTTTTTAAACCACTAGAGTCTTAATGTTTCAAATGAATTTTCCAATTTCTTTTTGGGCTGATGTTTCCATAGCCTGTTTCTTAATAAATTGCATGCCCTCTTCCATTTTTAAGGGTGAGATACCTTTTTGTATCTTATGCCCCAAACAACATTTGTTTCTCATTCCACCCAAAATAATTGGTTATACTTGCTTTGTCCAAGATGTTCGGCCTCAACATACAAAGTTGGATCCAAAGACCTTAAAATATATCTTTTTGGTTATTCTCGTGTTCTTTGAACATTCCTCCTTTTATTCCACACCTTCTTTCTTTTCGAATATGAGTCGAGGGAGTATCAAGAGTCAAAGGATGATTTCTTTGTCTACAATGTTATCTCTCCTTCTAATCCTCTTTGTGGTTCATCTTCACGTGTGTTTACTTCTATTTGTCAACCCATCACTGAAGTCTATGATCGACGACAACCTTCTTCAATTCCATGCCCTACCCCAAGGCTTCTTCGTCATTGGATCCAGAAATGAGTGATGATCTTCCTATTGCTCTTCGTAAAGGTAAACTTAAGTGTGCTCATCTTATTTCCTCTTCTGTTTCATATAACCATTAGTCGTCTTCTACATGTTCTTTCATTGCATCATTAGAGTTTGTATCATTAAGCCTATTCTCATCTTGGTTGGTGTGTTGCAATGGTGGAGGAGATGATTACTTTAGATGATAATTGTACTTGAGATTTAGTTTCTCTCCCTGCACGAAAAAAGTATATCAGTTGCAAATGGGTGGTTACAATTAAAGTTAATCCTGATGGTTTTGTCGCTCAATTAAAAGTACACCTTGTAGTGAAAGGCTACGCACAAACATGGCGTTAACTATTCTGATACTTTTTCTCCAGTAGTAAAAATGACATTTGTGAGGTTGTTTATTTCACTAACTTCAATCAGTCACTGGCCTTTACATCAGCTTGATATTTTTTTTGAAAACGAGGTGTAATTATGAGTCAATAAAAAGGACCTGATCATATTGAGGAAGGAGACCCAACCTTGTCTGGTTTCTCCTGAGTAGATGGATGAAGGATTGTATTCTAGAGAAGTTTCGAGCAACACACCTCATAAACCAATCAGATGGGGTTCGGAATTTGGATAGCTTTGTTGTTTCGGTTTCATCACTCGCATATTTGTTGAAAAACTTCCAGTTTGGTTCTTTTACAAGAACATCTATTGAATCAATGAACCACTCTAATTGGATCTTGGATAAAGTGAGGATTTTTTGGAAGTCTACATCTTCAATATTGAACCTCCACTTTTCGAACTAGATATCGTAGAAAGTGTCTACCATTTTTCAACTTTTGACTTCCATTTCTGAAAAAGATGGAGTTGTAACTCCCTGGGTTTGGCATTGTCGGCGACGTCACCGTGAGAAGGTGTGGCCGAAATAAAGAGAGAAGAGGGTGGGTGAGAGGAGAGGAGAGGTTCAATATTTGTTTCCAACTTTTTTACATCAGCTTGATATTAAAAGTGCATTTTGTTAGGATCCCACCTAACAAGGATTACCTCAAGAAGAAAAGATGAACTCAAGAATACTTAAAAAACATCTACACATGAAATATATATTAGATCTTAATAACAAGTAACAAGTAACCCTAGCCTTTCGAGAGGGTTAGACTCTCCCAAGGTTCCCTTACAAGGAAAACTTTCTCAAAATTCTTCACACCTCTCCCCAACCCCTCTCCTACTATTTATAACAAAAAGACCTAACCCATCTATTTACTAATATGACCTTACTAACAACCATTTTCATTTTCTCCTAATAATCCACTATTTTTCTATCTAGGGTCCTTACATTACTCCGCCCTTCGAAGACACATTGTCCTCAAGGTGTGCTTACAAACTACAAACCTTGAACTCTCTACCATACCCCTGCCTTCTTGGAAGAAATTTTATCCAGCTTTACCTTGAAATTCTATTGGGTTGTAATAATTACATTTGCATGCATCCAACCCTTTAGACTCCAAGAACTTCCCCAATCTTCATTCTTCTCACACGGAAAGTGATCCCAATTAACCAACTCCTATTCCCTGAACCTAATTCCATGCCACTTGCATTTTAATTTGAAGCTCTTCCTCTCTAATGGGCTAAGCCCACAATTAACTTTATGACCCCATCCCCAAATCAATTTCACGGCCCATACACCATCTTTCTTAGAATTACCAATGAGCTTCAGGCAATTTCGATCCATTTTCAAGTTACTTTTCAGCCACACTAACAAATGGGTCTCAATGAATTTAGCAAATTCAAGCCCATTAATTTCCTTTCTTTCTTTATGAAGGCTGTATTTCTTTGTTATCATCTCATGTTTGGCCCACCATCCATATTCCAATAGGATTTCCACTTCCTTAGATAAAGCCATCAATTTATTTTTCTTTGAGGTATAATGGGCCTCATCCCTTACTTTTGCAATCAGCCCAAAAAGCAACATTTTGGCCCACTTTTGATTAAATTCTTTCCCTATTTGCCATCCCACGTGATATACTTTAACCATTGAGGTTTGCATGTGCCAATCCTTCTCCTAGCCTCCACTTTGTTTTCCTGGCCATTTATTAGGAATTTGATCCCCAATTTCTCCACCTAAGCGAAGCTCATTTGAGAAAATCTGGGCCTTTTCATTTAATTTCAGCCCATTAAACAAATCATAACTACTACTGTCTCTAATTTTTCGCCCTAACGTCTGACGCTTCACGTGGGTTGAAGAATCGTTTTTCTTCAAGAAATCTTCCCCCTCCTTTCTGAATTTTTTTTGTCCGTAGCTGCTCACTCCCTCTGCAAATATCAAAGCATTCTTCCCGACAATTTCCGATCTCACTTGCAGCTTCGTTGCTATCCGCGTTCCGACAAACTCCCTTTGTGCCTTAGGTCGACTAGCTCCAACGCACCCTGTCTCCATCTCCTCTTCCTGTAACTGGACTTTTCGACAATCCATCTTCTTCTTTTTCTGGCCACTGGTGACCGACTCAGAATCTTTCCTCCGCCGCGGTTTCTGTTCATCCCCGCCTCGATTTTCTGTCACGACCCAGTATGTTTCCATTCGCCAGCCTCTTCATGATCCCTGTACTAATTCCATTGCCATTTTCTTCCTTGTCGTTACCCATTCTATCTTACTCCAATGACCTTCGAAATTCCTTTGTTCATCTTCTTCATTGCCTAGCTTCCTCATCCCTTCCCTACTTTGATATAACTCGCACGCCACAAAAGAAAGGCAAGGAAAGTAACGTACCTCAACAAAATCTTGGCCTATATATATGATCAGCCTCTCAATGCTGCCACTCCAATGAGTCGTTTCTTCTATTTTCACAGATCGTATCCAGGTCGACTTGTTCCACACATGTACTGTTTGATTCTTCTTTTTGTTTTCTTCACTACCACCAAGTATCAATGATCGCTTCCTCAATCGTTTCTTTGCCTTCCTTCTCATCCATAGTGTTTGCCTCCTTTCCCATGCTTCCGCCTTCTCTGTTCGGTGTTTCCATTTCCACCAAGTGTTTGTCTCCGACCACCTCACCCTTAGTCGTCGGCCATGGGAATACACAGTTAGATTTGGCTTCCTCCTCCCTTCATCTTTTTCATGGTCGTTCTTCGATTCCTTCATCTTCAAGTCATTGTTCCATTTCTGTTTTTCTTCAACTTTAATTTCTTCTAGTTTCTTATCCGCTCTTTCTTTATCTCTTTGCAGCCCTTCAGAAAGCTTTTGATGTATTGTTTTAGCACTCCTCTGTATTCTTTCTGCCTTGCAATCCACAATCCATTTCTGCATATGCTCCCATGTCCATGGAAACCCCTCTCATCCACCTCAAGTTTGCAATTAGCAGCCCATTTAAGTGCTTGCTCCCAAGTCCCTCTCTCAACTGCGGTCGAGTCTTCTTCCATCTTTCCTAATAATCCACTATTTTTCTATCTAGGGTCCTTACACATTTCTTCATGGTGATCCTCAAGAAGGGGTGTATATGGAGCAACCACTAGGGTTTGTTGCTCAGGGGAAGAATGGAAAGGCGTGTCGCCTTTGTAAATCTTTAGATGGACTAAAACGTAGTCCACGGGCTTGGTTTGGCAAATTTATTAAGGTGATCGAAAGTTTTGGAATGCAAAAGAGCCCGTTAGATCATTCAAACTTTTTTAAAAGATCCGAGAGTGGGGTGATCCTAATAGTAGTATATGTTGATGCAACTGTGGTTGTTGGTGATGATTCTTTAGATATCCAGTCCTTGAAGACTTTTCTCTATTGCCAATTCCAAATAAAAGATTTGAGCATGTTGAAATACCTCCTAGGAATTTGAGGTAAAAACAGGCAAGAAAGCAATACTATTATCACAGAGAAAATATGGACTTGTTGACTGAAACATGGAAGGTAGGGGCTAAGCCATGTAGTACCCCAACGATGCCTAACTTATAGCTCACAAAAGATGGAGAATTGTTGAAAGATCTTGAAAGATATAGGAGGTTAGAGGGAAAACTTAATTACCTTCCAGTGACTCGACTCGACATAGCCTATTTAGTAAGTATTATGAGCCAGTATATGTCATGCCCTAAAGTTGATCATTCAGCTGCTTTGGAATGATTCAGTGTTATCTGAAGGCTGCTCTCGGGCATGGTTTTATTATATAAGGATTATAGTCATACTAATATTGAATATTTCTCAGATGTTAATTGGTAAAATCTAAAGAAGACAAAAGATCAACTTCAGGATATTTTGTTTTTGTTGGTGGCAATTTGATGTCTTGGAAAAGTAAGAAACAAAATGTGGTGTCACATTCAAGTGCATAATAAAAATATAGAGCAATTGCACAGTTTTTGTGTGAATTGGATATATCAAATTGATTTGGATATATCAACTTTTTGACTATTGTTGAGTTGGGATTTGAAATCACCACACCAGCAAAATTGTGGTGTGATAATTAAGCAGCACTTGATATCGCATTTAATCCGGTGTTCCATGAAGTTAATGACAATTCTATCACTGGTTCTTTTTATTCTATACCAAGTTCAATAGCTTTTACCTCAAGTTCCTCTATACGATCATCCTCTTCCACTACTTCCAATTCCTCCCCATTTGCTTGAACAACTAACACTCTGAGTTCCTTCTGATCCTTCACCTTACATCTATGGCCTGCACAAAATTTTTCCTCACAACAAAAGCAGATCCCTTTCTCACGTCTGGCTTGAAACTCAGCATCACAAAAAGTCGTCTTGGTGGTCCTTCCCGTCAATTAATTTCTGCAGCCCCTCGAAGTGTGATAGCCCTTACTGGAACAGTACCTTCTGACTTATTGTCATTGGAAACTACATGAAATTGAGTATTTAAAGAAGTAGAAACCTGGGTTTTATCATCCCCTGCACATTTTAAGTCAGATTCACCCTTATCACCTCTCGGTTCTCAATTTTCTGGGCCAATTTCATCATTTGAGCAAGCCCAACAGGTTCCCAACATTCCAATTTTGTCTTAATCCAAGGTTTCAAACCATTCATAAATGTCTCTTCTATAACTGTCTTATGCAGAAAAGGCAAAGGTGCCACCAATTTATCAAAAAAAATTCTGTATTCATCCACTGTAGTGTCTTGTTTTATCGTTAAAAATCTGCCCAATATTGATCCCTCACGGTCTGATCGAAATCGAATAATAAGTCTTCTCTTTAAATCTTCCCAATTAACAAACGGTTCACGGTCTTCGTGAGATCTATACCAATCCAAGGCTGCACCGTCATCTTCTCTGACTCAGTAAGTTTGTGTATCTGAAAATAACGTTCTACTCCAAATAACCAAGAATCCGGGCAATACCCGCGAAAACTGGCATGTCAATTTTCTTGAATTTGCTTCGATCCCCTGCAGATTCTTCTCCTTCCAACTTGGTGTATTTTTCTTCCGATTTTCCTCCCATCACAAATGAATCACTGACATCAATCATAGTTTCTTTCTTGTTGGACGAACCTTCTGGAACTTCTTCCCATGTTGTCTTTCCCTTAATCATTCCTTAAGTATATTTCATGAAAGTTCGTTGTTGCTGCTGTTGCTGTCCAGCCTGCACACCCAGCCTTTCAATGCTCTTTGCCAACAATGAAATATCTTCCTTAATAGCTTCCTTTTTATGGGCCTTCTTTTCTTCTTTTAACAATGGTGTAACAGTTTGATCCATCTCTGGTCTTTACTGTTAAACTTAAATCTCTTAAGAATGATTTGGTGGGTGCACAATGGGTAACCCTAAAAAAATATGAATTGTGGTGTTTAAGTTAGTTTAATAAATGATTCTTCGTTTTGTAATTTGATTTCTTTTATTTTTTCTCTACTCATGAAATGTTTTGCTCGACCTGTAGATTTTTATAGGCTCCAGGGAAGTTTTTGAATTGCCTTCTGAAGGAGTGGGGTTGCAATTTTTGGCGTCCTTTTTTATGGAGCTTCTTTGAGTTTTCTTTCTTTATTTTGGGATTTGTTCTTTTTCAGTTCCATCATGCTGTCTAAAGTTTTGGACTTGAAGGGTTTGTCTTCATCTTCCTTCTTCTCCGACGATTTACGTCATACAGATGAGGTATAAATAATTACATCCTTGGTTTTTCATGTTTCTTCTTTTTCTAGCTTAAGAGATTGCTTGTTCTTGCAGTTCATAGTACTGCATGTTTTTGGATCTGTTTCTTCAGTGTCCCCCCACATCATTTCTGTTTCCTTCATATTTCTCTTTTTTTTTTTCTACTCATGAAATCTTCATCTTCTTCATCCAAGTATTACATAAGCATTTGGTATAATAAAATCTCTGTTCAAACAGTAGTTTGGGTTGCTAATAGAGATACATACACCCATTTCAGATCCATCAGTTTCTTTCTTGAAATTTCAAAATGGTAACTTAGTTCCTTCTTCCAATAGGAGTCTTTTCCCTGAGTCCTCATTTCCTTCAGTCACTTATCTTCTTTTCCTCCATAGCATTATTGTAAATTTTCTGGTTATTTTCACCTCCACTCTCTATTTCTCTATTTTGATTTGAGTTTCATTCATTTCTCATTTTCGTTTTGGAATCAATCTTTGAAATATGTGTGTTTAAGTGTTAAGTGTAATATATATATTTAAGTGTTAAGTGTAATAAATCTTAAAAACTGATGTATTTGACAAGCTTGGAAGGCTGACAATTAAAGTAGAAATGGACAAACTGGTCTTTCGTGTAGAGACAAACTGGAAAATAATCATTAGTCTAAAGCTATAGTACTCAAGAGACAAAAGAGTTACATTGAAATGTTCATAAGACCTTTTACATGTCTTCACCAACATGATACTTCAAATACAAAGCTCAGCCTCTTTTTTGCCACTCCATGGCATGAGTATCCCAGCCCATTAGTCATTTTTCTTCAAAACTTAAACCTGGTTATGGAAGGCATATTTGAGAGTGTTTTTAGAAACTAGTTAACAAAGTTGATTTTTATTAATAAATGTTTTGTTAAAAGTGTTCTTCGACTGTATTAAAACTTTGATATTGGCTAAGGGAAAGATTCAATTCAAAAACATGTTTTCTTGTTCAAAGTTGCTATATATTTAGTATCATTTTTTTGTTGTTCTGAGTGATTTCTTTACTGGGTTTATTGGAAATGGATGAAGAAACAGTTCCATAATTTTATTTAATTTTCCATTGAGTACAATGGAGAATGGATCAACCAAAAATGAAGAAGAATGCTTCGTACTTTACACTAACATTTTCATAGTAACTGTGATTTGATTTCATTGTTGTTTTGGCTAAGGAAAATCACTTTAGAATGAGACCGGCAATGCCCAAGAGAAAAGAAAAAATGATGAAACTATTGATTCTTGGTTTTGTTTCTTGTTATTAGTATCACTGGTGTGACATCAATATCTTGATATAAATGAAGTCAAAAGCATTGTTGCAAGAATTGTGAATTTAATTTGTAGGGTAGAGTACCTACAAATTTGTAGGTTATTGTTCCATTAGCCATATTAACCTTTGTTTGTGTCTACTTTTAAAAGTGATTTTGTAATATAAAAAGTAATTTCCAATGACTCAAAAACATATTTGGAACTTAATAGATGTAGGAAAAATTCAAATGGAAAAATAGACATTGTATCTAAATAATCAGTTCCATAGATTTGAGCATAACCTTTGGCAACAAGGCGAGCCTTTAATTGAGCCACTGCTCCATCAGGATTCATCTTGACAACAAACACCCATTTACAACCAATGACCTTCTTTCCTGCAGGACGAGATACCAAATCCCAAGTACCATTATCATCTAAAGCAGTCATCTCCTCAATCATTGCATTTTGCCAGCCATGATGAGACAAAGCTTCATGAACAGAGTTAGGAATAGATGTGGACTCAAGAGACGTAATAAACGCATATGTGGAGGGAGATAACTGGTGATAGGAAATAAAGGAAGAAACGGGGTAAGTACACTTGCGTTTACCTTTGCGAAGAGCAATGGGAAGATCATCACTTGGCTCTGGATCACATGATGAAGGAAGCATTGATGGAGGACATGAGTCTGAAGGTTGTGGTGGAGGTCGTCGGGAGTAGACTTGAGAAATCAACGGGCGGGAAGAAGGCACATCAGTAGACAAGGATGGTGTGGGAGAGGTAACCTCATATATAAAAAGATTGTCATCCTCCCCCTGACACGAACTCGATGGTGATGAAGTAAAGGGTGTATCCTAAAAAAAAACAACATCACGCGAAACCAGATACCTTTTAAGGGTAGGACAATAACAACGATAACCCTTTTGAATACGTGAATAACCCAAGAAGATACACTTCAAGGATTTGGGATCTAACTTAGTATGATGAGGACGAACGTCACAAACAAAACAGACACAACCAAATATCTTAGGAGCAATAGGAAACAAATGCTTGGTAGGAAAAAGAACACGGTAGGGAATCTTACCATTAAGAACAGAGGAAGGCATCCTATTAATCAAAAAACAAGCTGTAGAGACAGCATCTACACAAAAGGTTTTTGAAACATACATTTGAAAGGATAAAGCACGGGCAGTTTCAAGTAAATGCCTATTTTTCCGCTCTGCAACACCATTTTGAGATGGAGTGTTAGCACAGGAAGACTGATGAATAATGCCATTTTCACACAAGTAAGAGCCAAGAGAATGAGAAAAATATTCACCCGCATTATCAGTACGCAAAGTTTTGATAGAGACATTAAACTGGTTGTTTATTTCAATATGAAAGGCACAAAAATGAGATAATAACTCAGAACGATTTTTCATTAAATATAACCAAGTTAGACGAGAATGATCGTCAACAAAAGTAACAAAATAACAAAAGCCTGTTTGAGATACAACTGGACATGATCCCCAAATATCATAATGAACTAACTCAAATGGAGCAATTGCTCGTTTATCGACTCGAGGACTCGAACTAAGACGATGAAATTTCGCAAATTGACACAAATCACAATTTAAAGAGGACAAAGACCTAAATTCTGGATAAAGTTTCTTCAACACAAACAAAGATGGATGATCTAAATGACAATGGACTTCAAAAGGAGAGGGAACGACAGGACACGCCACAGCTTGCGATACTTGATGATCAAAGAGATAAAGGCCTCCTGACTCATATCCTCTACCAATAATCTTCTTCGTCACACGATCCTAAAACAAGCAATAACCAGAAAAGAACATGACAACACAATTTAGGTCATGAGTAAGTTGACTAGTAGAAATTAAATTAAAGGATAAGTTAGGCAAATGTAACACAGAAGAGAGAGAAAAGGATGGAGTAAGGTGAATAGTGTCAGAGCCAAGAACAGAAGTTGTGGAGCCATCGGCCAATGTAACCGATGGAAAAGGGGCAGGGGACAACGGTCTAGAAAATAGGTGAGAATTACCTGGGGTAACAGTGGATGCAATCGGAGTAGAGGAAGATGACGCTTGTAATGACTCTTGGTAATTCTGAAACTTAGCAAACTCATTTGCAAAAATAGTAACTGACGCCTCTGGTATATCACATGTGGAGGCTATCTGAGCATGTTGAGATCGTTGACTATTCTTATATAGCAATTTTCGACAATCACGTTTCATATGGCCTGGCTTACGACAGTAGTTACAAACAATCTCTACAGACTCTGGTTTTCGATGATCAGTACTATTCCTCTGAGGTGCCCGAGGGTTATTGTTCTTGCTAAAGAGAGCACTACTGGGTTGAGGAATAGACACACTAGTCAGAGAGCTTTCAATGCGAAGGACTCGAGTGAAGGCATCATCTAATGATGGAATCTTGGAGTTAGAGAGAATCTGTGTCTTTGCCATTCCAAATTCAGGTAAGAGTCCATTCAGGAAAATCATAACAGCCATCTTCTCTCGTTGAACTTGTTGAACTTTAACATCAGGACTAAAGGTAACAACAAGCCAAGCTCGGCAATGATCTTCTTAAGCCGCATAAAGTAGCAGGTGACAGACTCAGCTTTCTGTTCTGCACGAAAAAATTGCATACAAACTTCAAACATTCTATGCACTTGCTCTTTACCTGAGTATAGAAAATCCAAAAATTCCAAAAGTTCTTTAACAGACTCACAGTGATCAACCAATCCAATTATCTCACTCTCAATTGAATTCTTGATCTGAAGATATAAACGGGCATCATCACGAAGCCAATCCTTCTTCTGCTTTGCATCTTTTGGGGGATCTTCAGTCATATGATCATCCATATCAGTACTTCTCAAATAAAATAAAATTGTCCGACGCCAATCGTAATAATTGGATCCATTTAACTTATGTTCTGTGATCTTAGAGGCCAAGGGAATAACGTTGGAGACTACCAAATTTTTTATGTCGGCCATATTGAAGTCATACGTTGATTGTAGTCCACACGAACAAAGAGAAAATCGATCCAAACAGCTGTAAAATTGGAAAAAGACCCAAAACCAATCGTGTAACCTTCAGTTTTCGTCAAACCCAAATGTTATTTGATAAACCCAATGGTACATACTGACAGGAAACAATGGTTCGAGACAAGCCCAGAAGACGAAAGACAAATCAGACTTCTCACGCGTCGACGCGTGGGTGAAGGCGACGATGATTCTAGTGGCGCGTGACGGTCACACGCGGTGTTTTCCGGCGATCGGCGAAGACAGACTTGGGCGGACGGAGGTGGTGCTTCTTATGGTATGGGTGGTGTCGACAAATGGTCAGCGGAAGGTAACCTAAACTCAAACCTAATGGAGGAGGAAGCTAATGGCCATTCGAAACCGTAATGGCTCTGATACCATGTAATCTAGAATTCAGAGAAGTATCTGTCTTATTATGTTTGAGTCAAAGCAATGTTACATATTTATATAGAGAATAAACTAAACCCTAGAGACCATGTAAAATTATAATAAAGGACATATGTGTATATATATATCACAGCAATGAACTTTCAAATAAGTTCTAAATGAGCCAGATTATAGCAAATGGTTTTAGCCAAGGGAAACGACATATTGACTTTTTTCACTGGATGGATTGACTATAGCAAATGGTTTGATCTCCCTCCCACACCCACACCCATACCTCTGTGATGCCCAAGTTCTTTAGTATTTCCTTGTTGCTATCTTAGATGATGTATAATGTTTATTATTATTTTTTTATGTATGTTACATTGCATGTGCTTTCTTTTTTTCTAATTATCTCATGGCTTGCACAAACATTGGCTATTTAAATCCATTAGAGGTGGAATGATGTCGTTGATGGTGAAGTCTAAGACAGAAGATTCTGTCTTATGTGAAGTTATTGATGGAGGAGAGCTCAAGTCCATGAGACATTTAAATGTTTGAGGGAAAAGTGCTACACTTCCTTCAATTATTGGTTGGATTGAATAAGCATATCCTATAGATTTCACCTTTTCGTGAAGTTTCTTCTTTTCGGGATTTTTCTATAAGTAAATTTATTTTTTTGTCTGTGACTCAATGAATTTGTTGTCTACATCTTGCTGAGAATGATTTGGATGATATTAAATTTGGAGTTGACAACAAACTAGTTCATGAGTTGAAATATCTCAAGAGTAAATAGCTTCAGATCTTTATGTTGTGCTTATAAAGACAATTTGGATGCTGCATTTCTGCTAGTCTGTTCTACTACAAACTTATTAACTTATCTGACTCTACAGGCTGTGATGTTGATATGAACGTGATTGTAAATATAGAAAGTGTATACTCCATACCAAATTTGCATTCAATTATTACAGCTTCTGATGGGGTAATTGTTTGAATTTTTTTATAGCTTCGTTAATGTTAAATTTCATTCAAAGGTTTTCAATTTTGTTGGTAGTCTGGGGTTTTGTTGCTAATTGAAGAACATTATTTATTTTCATTTTAGGCAATGGTTGTCAGAGGTGATCTTGGTGCAGAACTTTTTATTGAAGAGGTTCCTCCTGCAGGTAGTTAACTTTTTCAATAATAATAATATTAAAAAAAGAAGCGATCCTTTGGGTACCTTAGATAACTTTTTTAATTATCTTAAATTCATGTCTTTTTTAAGCTTATGCAAAATTGGGAAGTTTTAGTTTCATGTTTAGATGTATATACATGTTAGGACGAATCAAAATGAAATTCAGCATTTGGGTTGTTTGCTTTTGACTAGTTTAGATGAATGGTGTGGTTTAGCATGTTTGGCTCAATCAAAAGATTATTAAGAACTTGTTTAATCAAGCTGATTTTTGTTGTTG

Coding sequence (CDS)

ATGTTTCAAATGAATTTTCCAATTTCTTTTTGGGCTGATGTTTCCATAGCCTGTTTCTTAATAAATTGCATGCCCTCTTCCATTTTTAAGGGTGAGATACCTTTTTGTATCTTATGCCCCAAACAACATTTGTTTCTCATTCCACCCAAAATAATTGGTTATACTTGCTTTGTCCAAGATGTTCGGCCTCAACATACAAAGTTGGATCCAAAGACCTTAAAATATATCTTTTTGGTTATTCTCGTGTTCTTTGAACATTCCTCCTTTTATTCCACACCTTCTTTCTTTTCGAATATGAGTCGAGGGAGTATCAAGAGTCAAAGGATGATTTCTTTGTCTACAATGTTATCTCTCCTTCTAATCCTCTTTGTGGTTCATCTTCACGTGTGTTTACTTCTATTTGTCAACCCATCACTGAAGTCTATGATCGACGACAACCTTCTTCAATTCCATGCCCTACCCCAAGGCTTCTTCGTCATTGGATCCAGAAATGAGTGA

Protein sequence

MFQMNFPISFWADVSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVILVFFEHSSFYSTPSFFSNMSRGSIKSQRMISLSTMLSLLLILFVVHLHVCLLLFVNPSLKSMIDDNLLQFHALPQGFFVIGSRNE
Homology
[Close]
BLAST of Cucsat.G15429 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 1.57e-22
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 2   FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQD 61
           FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+D
Sbjct: 239 FQMHVSKIFWVDAVSTACFLINRMPSSVLNGEIPYRVLFPTKHLFPIAPKIFGCVCFVRD 298

Query: 62  VRPQHTKLDPKTLKYIFLVI----------------------LVFFEHSSFYSTPS 94
           VRP HTKLDPK+LK IFL                        +VFFE + F S+PS
Sbjct: 299 VRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPTLKRYLVSPDVVFFEDTPFTSSPS 354

[Close]
BLAST of Cucsat.G15429 vs. NCBI nr
Match: XP_031744756.1 (uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 1.60e-22
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 2   FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQD 61
           FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+D
Sbjct: 445 FQMHVSKIFWVDAVSTACFLINRMPSSVLNGEIPYRVLFPTKHLFPIAPKIFGCVCFVRD 504

Query: 62  VRPQHTKLDPKTLKYIFLVI----------------------LVFFEHSSFYSTPS 94
           VRP HTKLDPK+LK IFL                        +VFFE + F S+PS
Sbjct: 505 VRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPTLKRYLVSPDVVFFEDTPFTSSPS 560

[Close]
BLAST of Cucsat.G15429 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 1.62e-22
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 2   FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQD 61
           FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+D
Sbjct: 583 FQMHVSKIFWVDAVSTACFLINRMPSSVLNGEIPYRVLFPTKHLFPIAPKIFGCVCFVRD 642

Query: 62  VRPQHTKLDPKTLKYIFLVI----------------------LVFFEHSSFYSTPS 94
           VRP HTKLDPK+LK IFL                        +VFFE + F S+PS
Sbjct: 643 VRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPTLKRYLVSPDVVFFEDTPFTSSPS 698

[Close]
BLAST of Cucsat.G15429 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 1.62e-22
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 2   FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQD 61
           FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+D
Sbjct: 616 FQMHVSKIFWVDAVSTACFLINRMPSSVLNGEIPYRVLFPTKHLFPIAPKIFGCVCFVRD 675

Query: 62  VRPQHTKLDPKTLKYIFLVI----------------------LVFFEHSSFYSTPS 94
           VRP HTKLDPK+LK IFL                        +VFFE + F S+PS
Sbjct: 676 VRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPTLKRYLVSPDVVFFEDTPFTSSPS 731

[Close]
BLAST of Cucsat.G15429 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 1.62e-22
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 2   FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQD 61
           FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+D
Sbjct: 631 FQMHVSKIFWVDAVSTACFLINRMPSSVLNGEIPYRVLFPTKHLFPIAPKIFGCVCFVRD 690

Query: 62  VRPQHTKLDPKTLKYIFLVI----------------------LVFFEHSSFYSTPS 94
           VRP HTKLDPK+LK IFL                        +VFFE + F S+PS
Sbjct: 691 VRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPTLKRYLVSPDVVFFEDTPFTSSPS 746

[Close]
BLAST of Cucsat.G15429 vs. ExPASy TrEMBL
Match: A0A0V0IC00 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.99e-22
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1   MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQ 60
           +FQM  P  FWAD VS ACFLIN MPS++  G++P+ ++ P + LF + PK+ G TC+V+
Sbjct: 88  LFQMKVPKQFWADAVSTACFLINRMPSTVLNGDMPYSVIFPNKSLFSVEPKVFGSTCYVR 147

Query: 61  DVRPQHTKLDPKTLKYIFL 78
           DVRP  TKLDPK LK IFL
Sbjct: 148 DVRPFVTKLDPKALKSIFL 166

[Close]
BLAST of Cucsat.G15429 vs. ExPASy TrEMBL
Match: A0A0V0I0V2 (Putative retrovirus-related Pol polyprotein from transposon TNT 1-94-like OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.32e-21
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1   MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQ 60
           +FQM  P  FWAD VS ACFLIN MPS++  G++P+ ++ P + LF + PK+ G TC+V+
Sbjct: 212 LFQMKVPKQFWADAVSTACFLINRMPSTVLNGDMPYSVIFPNKSLFSVEPKVFGSTCYVR 271

Query: 61  DVRPQHTKLDPKTLKYIFL 78
           DVRP  TKLDPK LK IFL
Sbjct: 272 DVRPFVTKLDPKALKSIFL 290

[Close]
BLAST of Cucsat.G15429 vs. ExPASy TrEMBL
Match: A5BSK6 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_006810 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.06e-21
Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1   MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQ 60
           +FQM  P  FWAD +SIACFLIN MPS++    IP+ IL PK+ LF + P+I G TC+V+
Sbjct: 580 LFQMKVPKQFWADAISIACFLINRMPSTVLNDPIPYSILFPKKSLFPVEPRIFGSTCYVR 639

Query: 61  DVRPQHTKLDPKTLKYIFL 78
           DVRP  TKLDPK LK +FL
Sbjct: 640 DVRPSVTKLDPKALKCVFL 658

[Close]
BLAST of Cucsat.G15429 vs. ExPASy TrEMBL
Match: A0A438G5Y3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1743 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.42e-20
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1   MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQ 60
           +FQM  P  FWAD +S ACFLIN MPS++   +IP+ IL PK+ LF + P+I G TC+V+
Sbjct: 37  LFQMKVPKQFWADAISTACFLINRMPSTVLNDQIPYSILFPKKSLFPVEPRIFGSTCYVR 96

Query: 61  DVRPQHTKLDPKTLKYIFL 78
           DVRP  TKLDPK LK +FL
Sbjct: 97  DVRPSVTKLDPKALKCVFL 115

[Close]
BLAST of Cucsat.G15429 vs. ExPASy TrEMBL
Match: A0A438HPS2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2969 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.50e-20
Identity = 51/117 (43.59%), Postives = 70/117 (59.83%), Query Frame = 0 

Query: 1   MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQ 60
           MFQM  P  FW D VS ACFLINCMP+ + KG+IP+ ++ P++ LF + P+I G TC+V+
Sbjct: 630 MFQMKVPKQFWVDAVSTACFLINCMPTVVLKGDIPYKVIHPQKSLFPLEPRIFGCTCYVR 689

Query: 61  DVRPQHTKLDPKTLKYIFL----------------------VILVFFEHSSFYSTPS 94
           D RP  TKLDPK L+ +FL                        +VF E +SF+S+P+
Sbjct: 690 DTRPFFTKLDPKALQCVFLGYSRLQKGYRCFSPDLNKYLVSTDVVFSEDTSFFSSPT 746

The following BLAST results are available for this feature:
BLAST of Cucsat.G15429 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G15429 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744758.11.57e-2250.86uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus][more]
XP_031744756.11.60e-2250.86uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757.... [more]
XP_031744755.11.62e-2250.86uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus][more]
XP_031744754.11.62e-2250.86uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus][more]
XP_031744753.11.62e-2250.86uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus][more]
BLAST of Cucsat.G15429 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0V0IC003.99e-2256.96Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1[more]
A0A0V0I0V24.32e-2156.96Putative retrovirus-related Pol polyprotein from transposon TNT 1-94-like OS=Sol... [more]
A5BSK68.06e-2159.49Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... [more]
A0A438G5Y31.42e-2058.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438HPS21.50e-2043.59Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15429.T1Cucsat.G15429.T1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
cellular_component GO:0000325 plant-type vacuole
molecular_function GO:0005488 binding