Cucsat.G15417 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15417
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionLOB domain-containing protein
Locationctg2009: 4063547 .. 4065259 (-)
RNA-Seq ExpressionCucsat.G15417
SyntenyCucsat.G15417
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCCCTGAAAAAACCCAATGGCTCCACCTTCCAGATTATATATATACTACTTTCCTTCTTTTTCTCCATTAAATATCCTCTATACCTCTCTACTTTCTCTTTTATATCTTCCAAACCCTTTTCCCCCAATTTTCATTCTCTCTCTCCACACTTGCTTCTTCCCATTTTATGCTTCCCTTCTCCCATTGCTGTTCTTCTTCAAAATGCGGATGAGTTGTAATGGTTGCAGAGTCCTTCGCAAAGGTTGCAGTGAAAATTGCAGTATTCGTCCTTGCTTGCAGTGGATCAAGTCCCCTGAATCTCAGGCTAATGCTACCGTTTTTCTTGCCAAGTTTTACGGCCGTGCTGGACTTATGAATCTCATCAACGCCGGTCCTGATCATCTCCGTCCTGGTTAGTTCAATTTCTCTTTTCTTCTCTCATCTTTCATTTAGGTTTTCTTTCTTTCTGCCTTTTCATTGATTTTTCCATTTTCCTTTTCATTTTGCAGCCATTTTTAGATCTCTTCTCTACGAGGCTTGTGGAAGGATTGTGAATCCCATTTACGGATCGGTTGGATTGTTGTGGTCTGGTAGTTGGCAGCTTTGTCAAGCGGCTGTTGAGGCCGTACTTAAAGGTGCTCCGATCACGCCGATCAACTCCGAGGCAGCGACTACTGGCGATGGACCGCCCTTGAAAGCCTACGACATTCGTCACGTTTCCAAGGATGAAAACTCTGTCGCCTCCAACGACGGTGGAGCCAATCGGCCAGTCAAGACGCGTTGCAGGTTCAAGCGGTCGTCTGTGAAGGCGAAAGCGAGTAAAGGAATCGCCTCCACCGTTGTTGATGAGTCGACTCGACCAGTCTGCTCTACCGAGTTGAACAGGTCGTCGAGTGGTGAGTCGTCGTTGAGTCACCAATCAGATTCGCGACATCTGGAGAACGAGAGTAAAGAAACCGAGAGCATGATTTCAGTGGAGACGGCAGAGGTTTCTCCTCGTCCGGCGCAGTCGGTTTTGTTCCGATCGGAATCAACGGGGGGGCGCGAGGGCGTTTCAGTGCCAATTCCGCCAAGTGAATTAGCTCTGGAATTAACCCTGGGGATGGAGCCGGTGTTACGTGCCCAGCACGTGATTCCAATGAAAAAACGAAAGATAGAAGCCGAAGTTGGGTTGAGGCCCAAAAGCGAGACGTGCAATACCGTTTTAGGCCTTGATTTTGCAGCCTGAAATGGAGGCCCAGTAATGAGCCCAAGCACATAACAGCGACAATAATAATAATAATAATAATAAGAGAAAGAGAAATAAGAATAAAAAGAGAGTACAATTTTGACGGCGGGGATTTGCTATCTTCGGTGGAAAAGAAGAGAAGAGATCTCGACCATTTGTTTAGTTGGTTCCTTTGTTTTGACGTTTAGTCTTCATTTAATTTTACTGTTTTAACCCTGTCACCTTTTGTAACGAGAAGCGGTTGTGTTGTGTATAAAAAAAGTGGTCGCAATGTGTATAGGAAGGAATTTGCTGTAAAAATGCATCAGAAGGCGAAAAGGTTTTTAGGTTTTCTTTTTTCTTTTTAATTTTCTTAAAATATTTTTATGTTTGGTATCGAATAACGGAAATTCAGCATTAATTTAAAGCTTGTTTAAAATGAATTTATATATACTAATATTACACATGCTTCACAACCCTTCCAATATGGAAGTCAATATGGTCGTTGGGTTCAATGGATTTG

Coding sequence (CDS)

ATGGCTCCACCTTCCAGATTATATATATACTACTTTCCTTCTTTTTCTCCATTAAATATCCTCTATACCTCTCTACTTTCTCTTTTATATCTTCCAAACCCTTTTCCCCCAATTTTCATTCTCTCTCTCCACACTTGCTTCTTCCCATTTTATGCTTCCCTTCTCCCATTGCTGTTCTTCTTCAAAATGCGGATGAGTTGTAATGGTTGCAGAGTCCTTCGCAAAGGTTGCAGTGAAAATTGCAGTATTCGTCCTTGCTTGCAGTGGATCAAGTCCCCTGAATCTCAGGCTAATGCTACCGTTTTTCTTGCCAAGTTTTACGGCCGTGCTGGACTTATGAATCTCATCAACGCCGGTCCTGATCATCTCCGTCCTGCCATTTTTAGATCTCTTCTCTACGAGGCTTGTGGAAGGATTGTGAATCCCATTTACGGATCGGTTGGATTGTTGTGGTCTGGTAGTTGGCAGCTTTGTCAAGCGGCTGTTGAGGCCGTACTTAAAGGTGCTCCGATCACGCCGATCAACTCCGAGGCAGCGACTACTGGCGATGGACCGCCCTTGAAAGCCTACGACATTCGTCACGTTTCCAAGGATGAAAACTCTGTCGCCTCCAACGACGGTGGAGCCAATCGGCCAGTCAAGACGCGTTGCAGGTTCAAGCGGTCGTCTGTGAAGGCGAAAGCGAGTAAAGGAATCGCCTCCACCGTTGTTGATGAGTCGACTCGACCAGTCTGCTCTACCGAGTTGAACAGGTCGTCGAGTGGTGAGTCGTCGTTGAGTCACCAATCAGATTCGCGACATCTGGAGAACGAGAGTAAAGAAACCGAGAGCATGATTTCAGTGGAGACGGCAGAGGTTTCTCCTCGTCCGGCGCAGTCGGTTTTGTTCCGATCGGAATCAACGGGGGGGCGCGAGGGCGTTTCAGTGCCAATTCCGCCAAGTGAATTAGCTCTGGAATTAACCCTGGGGATGGAGCCGGTGTTACGTGCCCAGCACGTGATTCCAATGAAAAAACGAAAGATAGAAGCCGAAGTTGGGTTGAGGCCCAAAAGCGAGACGTGCAATACCGTTTTAGGCCTTGATTTTGCAGCCTGA

Protein sequence

MAPPSRLYIYYFPSFSPLNILYTSLLSLLYLPNPFPPIFILSLHTCFFPFYASLLPLLFFFKMRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTRPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDFAA
Homology
BLAST of Cucsat.G15417 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 8.6e-79
Identity = 172/300 (57.33%), Postives = 201/300 (67.00%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRP IFRSLL+EACGRIVNPIYGSVGLLWSG+WQLCQ AVEAV+KG P+  I ++AAT G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
            GPPLK YDIRH+SKD+NS A+  G  +  +    R KR            STV  ++  
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 243 PVCSTELNRSSSGESSLSHQSD--SRHLENESKETESMISVETAEVSPRPAQSVLFRSES 302
              S E    +S +SSLSHQS+  + H E ESKE+ES +S E    SP   +        
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPAVKG------- 240

Query: 303 TGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGL 361
                         E+ L+LTL +EPV RA HV+P+KKR+I    G   K  TC T L L
Sbjct: 241 ------------SGEIKLDLTLRLEPVSRAYHVVPVKKRRI-GVFGTCQKESTCKTELML 263

BLAST of Cucsat.G15417 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.0e-71
Identity = 162/303 (53.47%), Postives = 181/303 (59.74%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSG+W LCQAAVEAV++G+P+TPI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 183 DGPPL--KAYDIRHV-SKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDE 242
             PP   K  DIRHV S+DEN                                    V  
Sbjct: 121 QAPPFNNKLCDIRHVSSRDEN------------------------------------VKR 180

Query: 243 STRPVCSTELN-RSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRS 302
            +R  C  E N RS S ESSLSH+S    + +E   TE                      
Sbjct: 181 RSRGACKEERNVRSLSHESSLSHESP---VSSEETTTEE--------------------- 229

Query: 303 ESTGGREGVSVPIPPSELALELTLGMEPVLRAQH-VIPMKKRKIEAEVGLRPKSETCNTV 361
                        P + + LELTLG+EP+ R  H V+PMKKRK+E   G     +TC   
Sbjct: 241 -------------PKTWIGLELTLGLEPLARGNHVVVPMKKRKLE-RCGTSEDEDTCKIE 229

BLAST of Cucsat.G15417 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-57
Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI--TPINSEAAT 182
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WSG+W  CQAAV+AVL G PI  TP+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 183 TGDGPPLKAYDIRHVSKDENSVASNDG------GANRPVKTRCRFKRSSV 225
               PP + YDIRHV+KD  +   +         AN+      RFKR SV
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

BLAST of Cucsat.G15417 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-44
Identity = 86/169 (50.89%), Postives = 118/169 (69.82%), Query Frame = 0

Query: 65  MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 124
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 125 PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDG 184
           PA+F+SLLYEACGR VNP+ G+VGLLW+G+W +CQAAVE VL+G  + PI       G G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI--PELLNGGG 120

Query: 185 ----PPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKAS 230
               P   + +   +  +  ++   D   +R +   CRF  S  +++++
Sbjct: 121 FAGFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRST 167

BLAST of Cucsat.G15417 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-42
Identity = 90/192 (46.88%), Postives = 126/192 (65.62%), Query Frame = 0

Query: 65  MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 124
           MSCNGCRVLRKGCSENC +RPC+QWI++ ++Q +ATVF+AKF+GRAGLM+ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 125 PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTGDG 184
           PA+F+SLLYEACGR VNP+ G++G+LW+G+W +CQAAVE VL+G  + PI  E  T G G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI-PELLTHGGG 120

Query: 185 ----PPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDES 244
               P   + +   +  +  ++  ND   +R +    RF  S  ++       +     S
Sbjct: 121 FAGFPSPTSEEASEICTEMLNLQQND-STDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLS 180

Query: 245 TRPVCSTELNRS 253
           +    S+EL+ S
Sbjct: 181 SEDQPSSELDLS 190

BLAST of Cucsat.G15417 vs. NCBI nr
Match: XP_004145641.1 (LOB domain-containing protein 41 [Cucumis sativus] >KAE8650578.1 hypothetical protein Csa_011448 [Cucumis sativus])

HSP 1 Score: 717 bits (1850), Expect = 2.05e-260
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0

Query: 1   MAPPSRLYIYYFPSFSPLNILYTSLLSLLYLPNPFPPIFILSLHTCFFPFYASLLPLLFF 60
           MAPPSRLYIYYFPSFSPLNILYTSLLSLLYLPNPFPPIFILSLHTCFFPFYASLLPLLFF
Sbjct: 1   MAPPSRLYIYYFPSFSPLNILYTSLLSLLYLPNPFPPIFILSLHTCFFPFYASLLPLLFF 60

Query: 61  FKMRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP 120
           FKMRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP
Sbjct: 61  FKMRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP 120

Query: 121 DHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAT 180
           DHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAT
Sbjct: 121 DHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAT 180

Query: 181 TGDGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDES 240
           TGDGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDES
Sbjct: 181 TGDGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDES 240

Query: 241 TRPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSES 300
           TRPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSES
Sbjct: 241 TRPVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSES 300

Query: 301 TGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGL 360
           TGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGL
Sbjct: 301 TGGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGL 360

Query: 361 DFAA 364
           DFAA
Sbjct: 361 DFAA 364

BLAST of Cucsat.G15417 vs. NCBI nr
Match: XP_008461588.2 (PREDICTED: LOB domain-containing protein 41 [Cucumis melo])

HSP 1 Score: 558 bits (1438), Expect = 1.22e-198
Identity = 286/303 (94.39%), Postives = 291/303 (96.04%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE A TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENSVASNDGG  RPVKTRCRFKRSS KAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGVIRPVKTRCRFKRSSAKAKASKGIASTVVDESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPR-PAQSVLFRSEST 302
           P+CSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSP  P QSVLFRSEST
Sbjct: 181 PLCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPPCPVQSVLFRSEST 240

Query: 303 GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLD 362
           G RE V+VPIP SELALELTLGMEPVLRAQHVIPMKKRKIE +VGLRPK+ETCNTVLGLD
Sbjct: 241 G-RESVAVPIPRSELALELTLGMEPVLRAQHVIPMKKRKIETDVGLRPKNETCNTVLGLD 300

Query: 363 FAA 364
           FAA
Sbjct: 301 FAA 302

BLAST of Cucsat.G15417 vs. NCBI nr
Match: KAA0063385.1 (LOB domain-containing protein 41 [Cucumis melo var. makuwa] >TYK11647.1 LOB domain-containing protein 41 [Cucumis melo var. makuwa])

HSP 1 Score: 546 bits (1408), Expect = 4.21e-194
Identity = 283/303 (93.40%), Postives = 288/303 (95.05%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           L   IFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE A TG
Sbjct: 61  L--PIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENSVASNDGG  RPVKTRCRFKRSS KAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGVIRPVKTRCRFKRSSAKAKASKGIASTVVDESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPR-PAQSVLFRSEST 302
           P+CSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSP  P QSVLFRSEST
Sbjct: 181 PLCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPPCPVQSVLFRSEST 240

Query: 303 GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLD 362
           G RE V+VPIP SELALELTLGMEPVLRAQHVIPMKKRKIE +VGLRPK+ETCNTVLGLD
Sbjct: 241 G-RESVAVPIPRSELALELTLGMEPVLRAQHVIPMKKRKIETDVGLRPKNETCNTVLGLD 300

Query: 363 FAA 364
           FAA
Sbjct: 301 FAA 300

BLAST of Cucsat.G15417 vs. NCBI nr
Match: XP_038899244.1 (LOB domain-containing protein 40 [Benincasa hispida])

HSP 1 Score: 525 bits (1352), Expect = 1.42e-185
Identity = 271/302 (89.74%), Postives = 280/302 (92.72%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE A T 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATA 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENSVASND  ANR VKTRCRFKRS+VK KASKGIASTV DESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDTEANRRVKTRCRFKRSAVKGKASKGIASTV-DESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 302
            +CSTELNRSSSGESSLSHQSDSRHLENESKETES+ISV TAE SP P  SV  RSESTG
Sbjct: 181 RLCSTELNRSSSGESSLSHQSDSRHLENESKETESIISVGTAEDSPPPVPSVFSRSESTG 240

Query: 303 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 362
             +G +VPIP SELALELTLGMEPVLRAQHVIPMKKRKIEA+VG RP +ETCNTVLGLDF
Sbjct: 241 -HDGGAVPIPQSELALELTLGMEPVLRAQHVIPMKKRKIEADVGFRPNNETCNTVLGLDF 300

Query: 363 AA 364
           +A
Sbjct: 301 SA 300

BLAST of Cucsat.G15417 vs. NCBI nr
Match: XP_022983660.1 (LOB domain-containing protein 41 [Cucurbita maxima])

HSP 1 Score: 516 bits (1329), Expect = 5.61e-182
Identity = 266/307 (86.64%), Postives = 277/307 (90.23%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENS ASNDGG NR VKTRCRFKRS+VKAKA KGI+STV +ESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKAKACKGISSTV-EESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 302
            +CS ELNRSSSGESSLSHQSDS H+ENESKETESMISV TAE SP P   VLFRSEST 
Sbjct: 181 RLCSIELNRSSSGESSLSHQSDSPHVENESKETESMISVSTAEFSPPPVLPVLFRSESTS 240

Query: 303 -----GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTV 362
                G    +VPIP SELALELTLGM+PV RA+HVIPMKKRKIEA+VGLRP +E CNTV
Sbjct: 241 VQKRLGHGDGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNEACNTV 300

Query: 363 LGLDFAA 364
           LGLDFAA
Sbjct: 301 LGLDFAA 306

BLAST of Cucsat.G15417 vs. ExPASy TrEMBL
Match: A0A0A0LCG6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV=1)

HSP 1 Score: 597 bits (1539), Expect = 2.43e-214
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 302
           PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG
Sbjct: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240

Query: 303 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 362
           GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF
Sbjct: 241 GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLDF 300

Query: 363 AA 364
           AA
Sbjct: 301 AA 302

BLAST of Cucsat.G15417 vs. ExPASy TrEMBL
Match: A0A1S3CEU1 (LOB domain-containing protein 41 OS=Cucumis melo OX=3656 GN=LOC103500157 PE=3 SV=1)

HSP 1 Score: 558 bits (1438), Expect = 5.92e-199
Identity = 286/303 (94.39%), Postives = 291/303 (96.04%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE A TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENSVASNDGG  RPVKTRCRFKRSS KAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGVIRPVKTRCRFKRSSAKAKASKGIASTVVDESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPR-PAQSVLFRSEST 302
           P+CSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSP  P QSVLFRSEST
Sbjct: 181 PLCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPPCPVQSVLFRSEST 240

Query: 303 GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLD 362
           G RE V+VPIP SELALELTLGMEPVLRAQHVIPMKKRKIE +VGLRPK+ETCNTVLGLD
Sbjct: 241 G-RESVAVPIPRSELALELTLGMEPVLRAQHVIPMKKRKIETDVGLRPKNETCNTVLGLD 300

Query: 363 FAA 364
           FAA
Sbjct: 301 FAA 302

BLAST of Cucsat.G15417 vs. ExPASy TrEMBL
Match: A0A5D3CIA7 (LOB domain-containing protein 41 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00110 PE=3 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 2.04e-194
Identity = 283/303 (93.40%), Postives = 288/303 (95.05%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCLQWIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           L   IFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE A TG
Sbjct: 61  L--PIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENSVASNDGG  RPVKTRCRFKRSS KAKASKGIASTVVDESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGVIRPVKTRCRFKRSSAKAKASKGIASTVVDESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPR-PAQSVLFRSEST 302
           P+CSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSP  P QSVLFRSEST
Sbjct: 181 PLCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPPCPVQSVLFRSEST 240

Query: 303 GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTVLGLD 362
           G RE V+VPIP SELALELTLGMEPVLRAQHVIPMKKRKIE +VGLRPK+ETCNTVLGLD
Sbjct: 241 G-RESVAVPIPRSELALELTLGMEPVLRAQHVIPMKKRKIETDVGLRPKNETCNTVLGLD 300

Query: 363 FAA 364
           FAA
Sbjct: 301 FAA 300

BLAST of Cucsat.G15417 vs. ExPASy TrEMBL
Match: A0A6J1J6I5 (LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=3 SV=1)

HSP 1 Score: 516 bits (1329), Expect = 2.72e-182
Identity = 266/307 (86.64%), Postives = 277/307 (90.23%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENS ASNDGG NR VKTRCRFKRS+VKAKA KGI+STV +ESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKAKACKGISSTV-EESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 302
            +CS ELNRSSSGESSLSHQSDS H+ENESKETESMISV TAE SP P   VLFRSEST 
Sbjct: 181 RLCSIELNRSSSGESSLSHQSDSPHVENESKETESMISVSTAEFSPPPVLPVLFRSESTS 240

Query: 303 -----GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNTV 362
                G    +VPIP SELALELTLGM+PV RA+HVIPMKKRKIEA+VGLRP +E CNTV
Sbjct: 241 VQKRLGHGDGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNEACNTV 300

Query: 363 LGLDFAA 364
           LGLDFAA
Sbjct: 301 LGLDFAA 306

BLAST of Cucsat.G15417 vs. ExPASy TrEMBL
Match: A0A6J1F4Q5 (LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 PE=3 SV=1)

HSP 1 Score: 511 bits (1317), Expect = 1.89e-180
Identity = 265/308 (86.04%), Postives = 277/308 (89.94%), Query Frame = 0

Query: 63  MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 122
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 123 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 182
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 183 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 242
           DGPPLKAYDIRHVSKDENS ASNDGG NR VKTRCRFKRS+VK KA KGI+STV DESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTV-DESTR 180

Query: 243 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 302
            +CS ELNRSSSGESSLSHQSDS H+ENESKET+SMISV TA+ SP P   VLFRSEST 
Sbjct: 181 RLCSIELNRSSSGESSLSHQSDSPHVENESKETDSMISVSTAKFSPPPVLPVLFRSESTS 240

Query: 303 -----GREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKS-ETCNT 362
                G  G +VPIP SELALELTLGM+PV RA+HVIPMKKRKIEA+VGLRP + E CNT
Sbjct: 241 VPKRPGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNNEACNT 300

Query: 363 VLGLDFAA 364
           VLGLDFAA
Sbjct: 301 VLGLDFAA 307

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M8868.6e-7957.33LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S... [more]
Q9ZW961.0e-7153.47LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S... [more]
Q9CA301.1e-5765.29LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S... [more]
Q9SN233.1e-4450.89LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S... [more]
Q9FN111.0e-4246.88LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S... [more]
Match NameE-valueIdentityDescription
XP_004145641.12.05e-260100.00LOB domain-containing protein 41 [Cucumis sativus] >KAE8650578.1 hypothetical pr... [more]
XP_008461588.21.22e-19894.39PREDICTED: LOB domain-containing protein 41 [Cucumis melo][more]
KAA0063385.14.21e-19493.40LOB domain-containing protein 41 [Cucumis melo var. makuwa] >TYK11647.1 LOB doma... [more]
XP_038899244.11.42e-18589.74LOB domain-containing protein 40 [Benincasa hispida][more]
XP_022983660.15.61e-18286.64LOB domain-containing protein 41 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A0A0LCG62.43e-214100.00LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV... [more]
A0A1S3CEU15.92e-19994.39LOB domain-containing protein 41 OS=Cucumis melo OX=3656 GN=LOC103500157 PE=3 SV... [more]
A0A5D3CIA72.04e-19493.40LOB domain-containing protein 41 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A6J1J6I52.72e-18286.64LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=... [more]
A0A6J1F4Q51.89e-18086.04LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 P... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 66..165
e-value: 2.5E-24
score: 85.7
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 65..171
score: 17.002129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..261
NoneNo IPR availablePANTHERPTHR31304LOB DOMAIN-CONTAINING PROTEIN 38coord: 63..360
NoneNo IPR availablePANTHERPTHR31304:SF9LOB DOMAIN-CONTAINING PROTEIN 40coord: 63..360

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15417.T1Cucsat.G15417.T1mRNA