Cucsat.G15390 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15390
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg2009: 2852960 .. 2858189 (-)
RNA-Seq ExpressionCucsat.G15390
SyntenyCucsat.G15390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGAAGCTTTTCACCCTACAACTTGAGTCTAGCAATGGAAAATTGGTGAAAATAACCGAAAAATGTAGATCATCAACACAATCTCTCATCCTCTCATGGAAGGCTCTCCACTGGCTTGTCCTCTTATCATTCCTTGCAACATGACCCTTGCAACTACAAATTCTTCAAAAAATACAATGATGAAAGAAGCAACCCGCTGAATGGAAAAACTACACAACAAAAAGTGGCTATTATGTCGAACTCACTCACCTTTACCATTCGAGGTGCAGGACGAAGATTTTCGTGCCATCGGAGGATCAAAAACAAGTTTGATTCTCTTTTTATTCCCTTCTATTCGATTATATGGGTGGCCCATCACATTCTCCTCCAAAAATTCATAGTTTCAAGATCGTTGTGCAAGCACAACCTTCTGCATCCGTCCAGCTGTCATCAAATCACACTATGCCTCAGCCGAAAGGAGGCCATGGTTGTGATCCAAAGATCTGGACTTTGCAACTCTTGGATAGACATTTGCTCCGCCTTACAATCCTCTCTGGCAGTAAGGTGCACACTCAACCCCTTTTGTGAAGATAAGGCTCTCCTACATACGTATGATCCACTTATTGCACAAACCTACTAACCACTAACTGACACAAAGTTGAACACCACATTAAGTTTCTGGATGCTACGAAGTTAACATCTTTTCAATCATTACAGATAGCCCTTTGGCAGATGGATTGATATTTATACCCATATTCCTCCACTTTGGAAAGACGAGAATTTTCAATTTATTGGGAACCAATGTGGCGGTTTATCTCTGACCAATCTGATCAACATCAATATCACAGCTGCTCGATTGAAGATTAAGCCAAATACTCATGTCCTCATTCCAAAACAGCTCTCCTTGCTCACTAATTAGTGTGGCATGGTCTGTATTGTGGATATTAGGGACGTATCTACTGGAAAACTGAACAAGAAGATATTGGAAGTCTCCGACCAGCTGACTGTCACTAATCAACCGAAGATATCTGCACGGCTAGACTCTCAACAATCGGCGGTGACATCGAACCAGACCTTTCTTACCCGGCCACTTCACCAACCAGCAACATCATCGAAACCAACAGTTACAACTAGGTCTCCCAAACTCCCTCCAATTCCATCAGAGTCAATTCCGCCGTTAATGCCAATAAATTGCGACAATAACCAGCCAAGAAAGAAGCAAATAAAATTGAGCAAGTCAACCCTCATGTTTTTGTGGAACAGATCACGTCGCCCACATCTGAGCAACTCCCTCCTTTAAACTTCTCATTTTTAACTCGAGCCCCCACGTGATCACCTTTGCCATTGTTTTCACACCCTACCTTTAATATTGTCACTTTCCAAGATGGGCCCACAAACCTTCAAAGAGCCATTACCCATTTCACCAACTTATATAGCCCGACCCATTTTGCCTCAGATTTTGAAACTTGCCTACTAGCCCAAATCCCGATTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCGATTGAAGCTCATCAACTCCTTTCGATTCTTTCACCTATTCCCGAAGATCTTAATAGGTTAGTTCATAGTTCTCCAACTCCACTAACGTCAACTTCCTCACAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTAAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAATATTATGGTTTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACACACTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATAATGGTGATCAATGAAAGTTATCTCTTGGAATGTTTGCAAACTTAATTCCTGGAGAAAACGAGCCTTGGTTAAATAGTTCATTCAACTTCATAACCCTGATTTTGTTCTTTTGCAGGAAACCAAGTTATCTAGCAACTGTTACAATTAAATCCACTTGGAGCTCTTCCTTTATTGGTTGGATAAATCTTGATGCAATTGACTCTTCGGGGGGAATTCTTATCCTTTGACTGGCTCGTGATTACCCTATACAGGAGGGTCATTCGAGGAAAATACATTGTCTCCATTCACGTTACCTTGGTAGATGGTTTCTCTCTACTACTGTGTATAGACCTTCTGTTCATGGTTTTCATGTTGATTATTGGAAAGAACTTTATGATTTGGCTGATGTGGGTCGTGACTCATGGATCATTGGCGGTGACTCCAATGTAACTAGATGGTTTGGGAATAATCATATGATCACACTATCTCTCACAGTATGCGAACCTTCAACCAATGGATCAATGATTGTCAATTACGAGATATTCCATTAAGCAATGGTGCTTGAACTTGGTCTAAGGACGGACACTAATAATACTCCTCCCTTCTTGATAGATTCCTTATCATCGATGCAGTTCTTGACAAGCTCGGCACTTTTAAAACTCAGTGTCTCAACCGTGTTACTTCAGACCATTTTCCGTTGGCACTTATATTGACCAATTTTGACTAGGGTCCTTATCCATTTCATTTTGAAAATTCTTGGCTCCAAGTCAAGGATTTTCATCGCTTGGTGGACTCTTGGTGGTCCAATACACATGATAAAGCTCAAACAACTTAAGATCTTTCTGCGTGTTCTTGGGCTAAAACATAGCAACCGATCGCATCTCAACAATCAAAGTTGTTTTCTAATCTTTGTAATTTGGATAGCTTAATGGATCTTGGTCAACTCACAAATGATCAAATATCTTAAAAGCATGAGATTCAAAAACATATTGAGAATTTAACCACTCAAGATCATATTCAATGGCGTCAGCGATGTAAGCTTCAATGGTTGGACTGGGGGACATGAAAGCTCAAATTTTACTGTATTGTGGCTGCTCGTAAGCATAAAAATAGAATAACTGAAACTCTCTCTCACCATGGTCGCGGTCTATTGACTATTACAGACATTGAATCTGAATATTGTGATTTCTACACAAATTTATTTAAAAGGAGAAGCGACCAGAGTTTTATTCCGATGAATGTTCACCGGAGCCCTATTAGTAGTGAACAATCAGCTAACCTTGAGCCGCCTTTTTCTGAAGATGAAGTCCACCGTGTTGTTTTCTCTTTGGGTGTGAGTAAATCCCTCGGTCCCGATGGTTTCACTGCTAATCTTTTTAAGTTTTTCTTAATCACTTTGAAGCTTGTCATCATGAACATGATTTCTGATTTCCATTCGAATGGCATTATCAAATGTTTCATTAAATGAAACCAACCTTTGTCTCGTCTCTAAGAAAGTTGATGCCACAAGTGTCTGGGATTATAGGCCCATCGGCCTCATTTTGTGTGCCTATAAAATCATTGCTCGTGTTTTATCTGATCGTCTAAAGAAGGTTCTTCCTAATACTATTGCCCCAAATCAGCTTGCATTTGTTGAAAAAGGACAAATTACAGATGCCTCCCTTATGGCCAATGAATTGATTGATGATAGGTCTTGAAATGGGAAGGATAATGTGGTTCTAAAATTGGACTTGGAAAAATCTTTTGATACAGTGGATTGGGACTTTCATGATGTTGTTCTTGAAATCAAAGGCTTTGGACCTATTTGGCAGTCTTGGACTCATGGGTGCATCTGCAATGCCAATTTCTCCATCATTATTAATGGTCGACCTTGGGGCAAGATTATCCCATCCCGTGGCATCAAACAGGTGTTCCTCTTTCCTGTTTTTATTCATCTTAGTTGCTAATTGTGTTAGCCATCTTATGGATCATAGGCTATCCAAGGGCCTCATTACTGCTCAACCTATTGGCAACTCTAATTTTGTTCTTGGCCATTTATAATTTGTTGATGACACTTTAATCTTTTCCATTGCGAGCCCAATTGCTCTTCATTGCGAGCCCAATTGCTCTTCAGCATCTTTTTGAGGTGATGAGATATATCTTTGAGGTTGCTTCTGGTTTTTCCATTAATCTTTCTAAGAGTGAGCTTCTTGGCATTAATTTGGATGCTTCTATCGTGGACTCTTTGGCTTGTTCATTTGGTTGTAAGCTTGGTCTATGGCCTTCTACCTACCTTAGTTTGCTTTTAGGTGGTAATTCCACATCTTCTGCTTTTAGGTGGTAATTCCACATCTTCTGCTTTTTGGCAACCCATTGTTGAGCGTATGCATCATAAACTACACATTTGGAAATACACCTACATCTCTAAAGGGGACGCATACGATAATTCATAAACTACACAATTGGAAATTTGGCAACTTATTATTTATCTCTCTATCATGCTACATTTGTTGTTATCCAAACTTTGGAGAAGTTGATTCGTGACTTTTTCTAGGAGGGTGCTCAAGGCATAGAGAATATGCACAACATTAATTGGGAGACTACTCAGTGAGCTCGTCTGATGGGTGATTTGAGTATTGGTAATTTTCGTGCTCACGAATGTGCCCTCCTTGCAAAATGGGTCTGGTAGTTTTTGCATGAATCTACTGCCTTGGTGGCCAATCGCACCCAGTATCATCTTGACAATGATTCTTCCATCTCTTTTTGGAAGGACTTCTAGCTCAATTGTGGTACTCTATCATCTGCTTTCCCTTGCCTTTTTTGTTTGGCTCACGATCCAGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGTTGCTGCTTGGAATTTGCACCTTTGCCGCAATCTCAATGATTCCGAAATTATCGATTGGATGGCCTTATCACAACATTTACAGTCTGTCAATTTTCGTGCTGATGCTGATTTTTGGATATGAACGATCTAACCCTCATCTTCCTTCTCTGTCAAATCTCTTAACGATGATTTGGTGGGAGCTGGTAATAGCCATGTTGTGAATTGTTTATTCGGCTATTTGGTTGGATCGTTTTCCAAAGAAAATTAAAATTTTCTTGTGGGAGCTTAGTCATAGAGCTATCAATACTGCTGACTGTCTTCAACGTCGTATGTCATACATGGTCCTCTCTCCCTCTTGGTGTTTTATGTGTCACACTGATTCAGAATCTGCTGCCCATCTTTTTATTCCCTGCTCCTTTGCATCCTGTTTTTGGCATTACATCCTTAATGCTTTTGGTTGGCCGTTGGTTCTTTCACAAAATATGTTTGACAATTTATCATTCTCTTTTGGTTGGTCACCCATTTACTGGATGCAAGAAAACCCTCTGGCTGGCGATTATTCAACCTTTCT

Coding sequence (CDS)

ATGGTCTGTATTGTGGATATTAGGGACGTATCTACTGGAAAACTGAACAAGAAGATATTGGAAGTCTCCGACCAGCTGACTGTCACTAATCAACCGAAGATATCTGCACGGCTAGACTCTCAACAATCGGCGGTGACATCGAACCAGACCTTTCTTACCCGGCCACTTCACCAACCAGCAACATCATCGAAACCAACAGTTACAACTAGGTCTCCCAAACTCCCTCCAATTCCATCAGAGTCAATTCCGCCGTTAATGCCAATAAATTGCGACAATAACCAGCCAAGAAAGAAGCAAATAAAATTGAGCAAGTCAACCCTCATGTTTTTGTGGAACAGATCACGTCGCCCACATCTGAGCAACTCCCTCCTTTAA

Protein sequence

MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPATSSKPTVTTRSPKLPPIPSESIPPLMPINCDNNQPRKKQIKLSKSTLMFLWNRSRRPHLSNSLL
Homology
[Close]
BLAST of Cucsat.G15390 vs. NCBI nr
Match: KGN57667.1 (hypothetical protein Csa_010491 [Cucumis sativus])

HSP 1 Score: 233 bits (594), Expect = 6.35e-76
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPA 60
           MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPA
Sbjct: 70  MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPA 129

Query: 61  TSSKPTVTTRSPKLPPIPSESIPPLMPINCDNNQPRKKQIKLSKSTLMFLWNRSRRPHLS 120
           TSSKPTVTTRSPKLPPIPSESIPPLMPINCDN QPRKKQIKLSKSTLMFLWNRSRRPHLS
Sbjct: 130 TSSKPTVTTRSPKLPPIPSESIPPLMPINCDNIQPRKKQIKLSKSTLMFLWNRSRRPHLS 189

Query: 121 NSLL 124
           NSLL
Sbjct: 190 NSLL 193

[Close]
BLAST of Cucsat.G15390 vs. ExPASy TrEMBL
Match: A0A0A0LAI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239310 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 3.08e-76
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPA 60
           MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPA
Sbjct: 70  MVCIVDIRDVSTGKLNKKILEVSDQLTVTNQPKISARLDSQQSAVTSNQTFLTRPLHQPA 129

Query: 61  TSSKPTVTTRSPKLPPIPSESIPPLMPINCDNNQPRKKQIKLSKSTLMFLWNRSRRPHLS 120
           TSSKPTVTTRSPKLPPIPSESIPPLMPINCDN QPRKKQIKLSKSTLMFLWNRSRRPHLS
Sbjct: 130 TSSKPTVTTRSPKLPPIPSESIPPLMPINCDNIQPRKKQIKLSKSTLMFLWNRSRRPHLS 189

Query: 121 NSLL 124
           NSLL
Sbjct: 190 NSLL 193

The following BLAST results are available for this feature:
BLAST of Cucsat.G15390 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G15390 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57667.16.35e-7699.19hypothetical protein Csa_010491 [Cucumis sativus][more]
BLAST of Cucsat.G15390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAI53.08e-7699.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239310 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15390.T1Cucsat.G15390.T1mRNA