Cucsat.G15374 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15374
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NAC domain-containing protein
Location	ctg2009: 2621983 .. 2623483 (-)
RNA-Seq Expression	Cucsat.G15374
Synteny	Cucsat.G15374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATACAAACAGTTTGTGTGTGTATATATATATAAAAAGAAAGCAGTGCTAGGTAAGGATATATATAAAAAGAATTCTGAGGCTTTCTTGCACTTTCATCAATAATTCCCTAAACGCCAATAACACACATACTCTCTCTCTCTCTCTCTCGGTCTCTATACTCCGACTAAAACTTCATGGAAGGTGGCGGCGGACAGCGGAGCTCCGACGGGTACTTGCCTCCGGGGTTCCGGTTCCACCCGACCGATGAAGAGTTGATCGGGCATTACCTCTTGAAGAAGGTTCTGAACTCCCATTTCTCTTCACCGGCCATTGCTCATGTCGACCTCAACAAGTCCGAGCCATGGGACCTCCCTGGTCAACTCCTCTCTCTCTCTCTTTTTCTTTTAAATTAAGTTCTGTTCGTATTTTTTTCGATACCTACAATATTTTTTTTTCCCTTTTCGAATTTATTTTGAATGAAAATTTTCAAGTCTTTGTTTGATAACCAATTAAACTTTTTTTTTCTATTTTTAAAAATGATATATATTTTCTCCTATTTCATATTATTACCATATTTTGAAACTTCATTCTGAATTTTTTTTTTTTATTCAAGTACATTTTATTACAATTTCTTACTATGATCGACATAAATATTAAGTACACTGTAGTAGTCAAATTCATACAACACATTTTTAAGAACTACTTTTTAAAATCTAGTTTGGTTTTTTAAAACGTTGATAAAGTTAGTTAACAAAAATAAACAAATGAAAACATCGTTATGAAATGTAAATTGAAGAAAGTTTTGAAGTAGTAGTAATAATATATATATATATATATATATATATATAAAACTAATTGCAATAGTAATTGAATTAAAATAAAAAGGTTGAATTAATTAATAAATTGTTGTTGTTAAACATAAACAGAGAAAGCATTGATGGGGGAGAAAGAGTGGTATTTCTTCAGCGTGAGAGACCGGAAATACCCAACCGGATTGAGAACAAACCGGGCGACGGAAGCCGGGTACTGGAAAGCGACCGGGAAAGACCGGGAAATAATGAGCTCAAAAACCAACTCCTTGATTGGAATGAAGAAGACCCTTGTTTTCTACAGAGGCAGAGCTCCCAAAGGCCAAAAATCCAATTGGGTTATGCATGAATTTCGTCTCGCCGGCAAATTCTCTTACCATTTCCTCTCCGCCGCTACTTCCAAGGTTCCTCTCTCTCTCATCTCCACCCCTCGCCGTCGATGTTGACAGTTTCATTAATTCACTTTATTTGTTTTTTAAATACAACCCTTCCTCATATCAACGTCAAATCACCCATCTCTATTCTAATTTCATGCTTCCATTCAATTAATACTTTATTTATTTACTGCTTTTCTTTTTCCTTTTCCTTTTTTTTTTATAAAATAAAGTAAACCCATTTGAATTCTCCAAATTTAGTAAAAAACATTTAATTTTTTTATATTTGAAAACGTTTCAATTTTGTGTAATTTTTGTATTATGGTGGGTTTTTTTGTTTTTATTTTAGAAATATACCATTAACTTCTATTTTTAGAAAATATTAAAGAATTTTTTATTTAAAGTTAGGTTAATTTTTTAAGTGTGTTTTCAAATATATTGAAAAATCAATCAAAATATTTATTTAAATATTTATAAATGTAGCAAAATATTTATAAATGTAGCAAAATATATTTGTATTTAACAAACGATGATTTGCTTAAAAAAAAAAAGTTTAATGATATATCTTTTATACCATAATTTTTTTTTGTTATATTTATAAATATTTTAAACAGTTTTGTAATTGATTTTTGTTAATTTTTATTGTAATTAAATTTTTAGATTAAAACTACAAGTTTAGCCTTTTAGTTTCACGTTTATATTTATTTGATATTTTGTCCGTACAATGTCGTACTTTGATACGTCGTGTCTATAATAAATTTTAAAACTATTAATGTTATATATAAATAATAATATTTATTATTTAAAAAATATGATTGATTTATTAATTAATGTAAATTTGAATCTTATATCTAAGTCTAACAGTTAAACGTCAAAGTAAATGGGTGAATTTAGAGTAATTTAGAGTGAAGATAAAAATTGGAAATTTAGAAACTTTGTTAAACTTAATATTACTTTGGAAGTTTAAAGTTGTATTGAATATTTTTAAAAATGTAGAAACTAAATGGGTACTAAGAATAAATTAGGAGAGATTATTTTGAGGAAAGATCGATTATATTTACTTGATTTACTAAATTAGGAAGCAGTAAATAATGTTTTGAGTAGGTGAAGTAATTATAATAAAGATTTATTACATAAATGTAATTTATAATATATGGTATTTTCAGTGCATTTATTGCACATTATTTTGATGGATGAGGACCAATTTGAATGAAGGGATTTTAATGTTTCTTTTTGGATTAAATGTGGTTTATTTAATGTTTGGGAATAATAATAATAATTTCATAAATGAAATTTATGTTATGTCCCATTCCATTATTTATTTTCCTCATCAATCATACAGACCTATGGGTGGTGTGTATTTATTCTTTTATTGTTGTTATTTATTTTCTTTTTAACCTTCTTAAATTTTGCTACACCAAAGGGAACATCATCATCCCTTGTTTTTCTTTCATTTTATTTCGTCCTCATTTTAATATTTTCAACAAAAATATTTATGATCAATATATAAAAATATATATTGATCATAGACTCTACCAAAAACTATTTGTGTTTATTTGGTTTTCAAACTTTTTATTTGGTATTTAATAACTCACCTTAAACCCCTGTATTTAGTACATATGTGAAAGCTTAATTTATAATACTAAAACTTATAAGGACTAAAAAACTAAAAATTTAAAACTTTGTTTAATTAATTAAGTATCTTCTCGTCAAAAGTTTAAAAAGTATTACTACTTTCAGATTGGTTTGCTAATTAATTGAGCTTATTTTTCTTTTCTTTTTTTTTGAACAAATTAAATCTAGCTTATAGATTTTTTACAATATATGTTATAGCTTTTTAATTATTATAGTATATATATGTTTGTTGTTTAGAAAAATAAAAAGAGGTCAATTATCATGGAGTTCTTTATGTTTTTTTTTTTTTTTAACATGGATCGGTTTATTATCATTTTTTATAATTTCAAATATTTTACTTAAGCATTTTTCTGTAAAATCAATTAGTTTCGCTAAGACCAACAGACTATTAATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAAGTGACATGTTAAAAATTGAAAAGTACTCATGTACATCATAGATATCATCTATTTTTATATTTTACTAAATTGTCTAACTATAATATAGTAAATTTTGTTATTTTTTCTTTTTAGAATATTTTTAATTTTTTTATATGAATGTGAAAATAAATTCACAAAGATAGGTGATATGGAGATGTATCAAATATTACCAATATTACATTTAAGAAATATTATATATAAAAAATATTTTGGGGTGTTAGAGAAGGTTTTGATGACATTGAAGTGGTTGGGAAGCAGGATGAATGGGTGATATCAAGAGTTTTCAAGAAGACCGGCTCTGGCAACGGGGCTACCATGCACGGCGGTGCAATGAAGAAGACTTGCCCGAATCCCGAACCCAGTTCCCCTTCCTCGGTATCTCTGCCTCCTCTTCTCGACTCATCCCCCTACCCCTCTGCCGCCGTCGCAGCCGACGCTACCGTCAGCTCGGCCGCTTATGCGGACGGCGACGACACAAGGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTCAACTACTGCTCCGCTTCAGCCTTTCCGAGCTTTCAGGAGAATCTACAGGCGCCGTTCTTGATCTCCCCTGTGGGTCCGTCGCTGGTTCATCTCGTGGGGGAGGCAGCCAATTTGGATGGGTATGGCGGTGGTCCGACACCAGAGGGTTCTGCCGACGTGAATGCTTCAGCTTATGTGTGGAGATTCTGAGATAAAATTATTCTCAATAGAATCTGATATATATAAAATGTGCTTTTAAAATCTCTTTTTGTTTTCTTATCAAATAATTTTGTGGACAAATGAAGAAACAAACCTTTTTATTATTATTACCACTTAAATATTTGTATATTATTTTATAATTAATTCACCCTTTTAGATGAGATAATCCAAAAAGATAAAAAAAAATATAAAAAGAAAGGAGATTATAATTTAAATTTTAAATTTTAA

Coding sequence (CDS)

ATGGAAGGTGGCGGCGGACAGCGGAGCTCCGACGGGTACTTGCCTCCGGGGTTCCGGTTCCACCCGACCGATGAAGAGTTGATCGGGCATTACCTCTTGAAGAAGGTTCTGAACTCCCATTTCTCTTCACCGGCCATTGCTCATGTCGACCTCAACAAGTCCGAGCCATGGGACCTCCCTGAGAAAGCATTGATGGGGGAGAAAGAGTGGTATTTCTTCAGCGTGAGAGACCGGAAATACCCAACCGGATTGAGAACAAACCGGGCGACGGAAGCCGGGTACTGGAAAGCGACCGGGAAAGACCGGGAAATAATGAGCTCAAAAACCAACTCCTTGATTGGAATGAAGAAGACCCTTGTTTTCTACAGAGGCAGAGCTCCCAAAGGCCAAAAATCCAATTGGGTTATGCATGAATTTCGTCTCGCCGGCAAATTCTCTTACCATTTCCTCTCCGCCGCTACTTCCAAGGATGAATGGGTGATATCAAGAGTTTTCAAGAAGACCGGCTCTGGCAACGGGGCTACCATGCACGGCGGTGCAATGAAGAAGACTTGCCCGAATCCCGAACCCAGTTCCCCTTCCTCGGTATCTCTGCCTCCTCTTCTCGACTCATCCCCCTACCCCTCTGCCGCCGTCGCAGCCGACGCTACCGTCAGCTCGGCCGCTTATGCGGACGGCGACGACACAAGGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTCAACTACTGCTCCGCTTCAGCCTTTCCGAGCTTTCAGGAGAATCTACAGGCGCCGTTCTTGATCTCCCCTGTGGGTCCGTCGCTGGTTCATCTCGTGGGGGAGGCAGCCAATTTGGATGGGTATGGCGGTGGTCCGACACCAGAGGGTTCTGCCGACGTGAATGCTTCAGCTTATGTGTGGAGATTCTGA

Protein sequence

MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGGAMKKTCPNPEPSSPSSVSLPPLLDSSPYPSAAVAADATVSSAAYADGDDTREHELHVTCFSTNNLNYCSASAFPSFQENLQAPFLISPVGPSLVHLVGEAANLDGYGGGPTPEGSADVNASAYVWRF

Homology

[Close]

BLAST of Cucsat.G15374 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.6e-67
Identity = 117/142 (82.39%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 13  YLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYF 72
           YLPPGFRFHPTDEELI HYLL+KVL+  FSS AIA VDLNK EPW LP +A MGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 73  FSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKS 132
           FS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFY+GRAPKG+KS
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 133 NWVMHEFRLAGKFSYHFLSAAT 155
           NWVMHE+RL GKFSYHF+S ++
Sbjct: 136 NWVMHEYRLEGKFSYHFISRSS 157

[Close]

BLAST of Cucsat.G15374 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.0e-66
Identity = 119/152 (78.29%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 3   GGGGQRSSD-GYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPE 62
           G G  R  D   +PPGFRFHPTDEELI +YLLKKVL+S+FS  AI+ VDLNKSEPW+LPE
Sbjct: 8   GWGRPRFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPE 67

Query: 63  KALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF 122
           KA MGEKEWYFF++RDRKYPTGLRTNRATEAGYWKATGKDREI SSKT SL+GMKKTLVF
Sbjct: 68  KAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVF 127

Query: 123 YRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAA 154
           Y+GRAPKG+KS WVMHE+RL GKFSYH++S++
Sbjct: 128 YKGRAPKGEKSCWVMHEYRLDGKFSYHYISSS 159

[Close]

BLAST of Cucsat.G15374 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-60
Identity = 111/137 (81.02%), Postives = 119/137 (86.86%), Query Frame = 0


Query: 14  LPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 73
           LPPGFRFHPTDEELI HYL KKVL++ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 74  SVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKSN 133
            VRDRKYPTGLRTNRATEAGYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQK+N
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 134 WVMHEFRLAGKFSYHFL 151
           WVMHE+RL GKFS H L
Sbjct: 136 WVMHEYRLEGKFSAHNL 150

[Close]

BLAST of Cucsat.G15374 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.6e-59
Identity = 108/137 (78.83%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 14  LPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 73
           LPPGFRFHPTDEELI HYL KKVL+  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 74  SVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKSN 133
            VRDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQK+N
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 134 WVMHEFRLAGKFSYHFL 151
           WVMHE+RL GK S H L
Sbjct: 137 WVMHEYRLDGKLSAHNL 151

[Close]

BLAST of Cucsat.G15374 vs. ExPASy Swiss-Prot
Match: Q9LJW3 (NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.0e-58
Identity = 107/138 (77.54%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 14  LPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 73
           LPPGFRFHPTDEELI HYL  KV+NS FS+ AI  VDLNK EPWDLP KA +GEKEWYFF
Sbjct: 24  LPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFF 83

Query: 74  SVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKSN 133
            VRDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  SL+GMKKTLVFY+GRAPKG K+N
Sbjct: 84  CVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGK--SLVGMKKTLVFYKGRAPKGVKTN 143

Query: 134 WVMHEFRLAGKFSYHFLS 152
           WVMHE+RL GKF+   LS
Sbjct: 144 WVMHEYRLEGKFAIDNLS 159

[Close]

BLAST of Cucsat.G15374 vs. NCBI nr
Match: TYK11248.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (851), Expect = 1.58e-114
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MEGGGG-QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60
           MEGGGG QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL
Sbjct: 1   MEGGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60

Query: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120
           PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL
Sbjct: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120

Query: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 161
           VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL
Sbjct: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 162

[Close]

BLAST of Cucsat.G15374 vs. NCBI nr
Match: KAA0058828.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (851), Expect = 1.69e-114
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MEGGGG-QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60
           MEGGGG QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL
Sbjct: 1   MEGGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60

Query: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120
           PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL
Sbjct: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120

Query: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 161
           VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL
Sbjct: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 162

[Close]

BLAST of Cucsat.G15374 vs. NCBI nr
Match: XP_011651296.1 (protein CUP-SHAPED COTYLEDON 2 [Cucumis sativus] >KGN57633.1 hypothetical protein Csa_011391 [Cucumis sativus])

HSP 1 Score: 328 bits (840), Expect = 6.48e-111
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP 60
           MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP
Sbjct: 1   MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP 60

Query: 61  EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120
           EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV
Sbjct: 61  EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120

Query: 121 FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156
           FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK
Sbjct: 121 FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156

[Close]

BLAST of Cucsat.G15374 vs. NCBI nr
Match: XP_008456019.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo])

HSP 1 Score: 323 bits (828), Expect = 4.48e-109
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEGGGG-QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60
           MEGGGG QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL
Sbjct: 1   MEGGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60

Query: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120
           PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL
Sbjct: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120

Query: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156
           VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK
Sbjct: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 157

[Close]

BLAST of Cucsat.G15374 vs. NCBI nr
Match: XP_038905510.1 (protein CUP-SHAPED COTYLEDON 2-like [Benincasa hispida])

HSP 1 Score: 310 bits (795), Expect = 2.92e-104
Identity = 147/156 (94.23%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP 60
           MEG GG++SSD YLPPGFRFHPTDEELIGHYLLKKVLNS+FS+PAIAHVDLNKSEPWDLP
Sbjct: 1   MEGSGGKQSSDRYLPPGFRFHPTDEELIGHYLLKKVLNSNFSTPAIAHVDLNKSEPWDLP 60

Query: 61  EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120
           EKA MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV
Sbjct: 61  EKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120

Query: 121 FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156
           FY+GRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK
Sbjct: 121 FYQGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156

[Close]

BLAST of Cucsat.G15374 vs. ExPASy TrEMBL
Match: A0A5D3CJ68 (Protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001030 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 7.64e-115
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MEGGGG-QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60
           MEGGGG QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL
Sbjct: 1   MEGGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60

Query: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120
           PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL
Sbjct: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120

Query: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 161
           VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL
Sbjct: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 162

[Close]

BLAST of Cucsat.G15374 vs. ExPASy TrEMBL
Match: A0A5A7UUF0 (Protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00260 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 8.20e-115
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MEGGGG-QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60
           MEGGGG QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL
Sbjct: 1   MEGGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60

Query: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120
           PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL
Sbjct: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120

Query: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 161
           VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL
Sbjct: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKVPLSL 162

[Close]

BLAST of Cucsat.G15374 vs. ExPASy TrEMBL
Match: A0A0A0L787 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 3.14e-111
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP 60
           MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP
Sbjct: 1   MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP 60

Query: 61  EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120
           EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV
Sbjct: 61  EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120

Query: 121 FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156
           FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK
Sbjct: 121 FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156

[Close]

BLAST of Cucsat.G15374 vs. ExPASy TrEMBL
Match: A0A1S3C1U0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 2.17e-109
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEGGGG-QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60
           MEGGGG QRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL
Sbjct: 1   MEGGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDL 60

Query: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120
           PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL
Sbjct: 61  PEKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTL 120

Query: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156
           VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK
Sbjct: 121 VFYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 157

[Close]

BLAST of Cucsat.G15374 vs. ExPASy TrEMBL
Match: A0A6J1E4T0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430609 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 2.17e-102
Identity = 143/153 (93.46%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 4   GGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKA 63
           GGG +SSDG+LPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEKA
Sbjct: 7   GGGHQSSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKA 66

Query: 64  LMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 123
           LMGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR
Sbjct: 67  LMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 126

Query: 124 GRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSK 156
           GRAPKGQK+NWVMHEFRLAGKF+YHFLSA +SK
Sbjct: 127 GRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSK 159

The following BLAST results are available for this feature:

BLAST of Cucsat.G15374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04017	4.6e-67	82.39	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
Q9FRV4	3.0e-66	78.29	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
Q9FLJ2	1.4e-60	81.02	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]
Q9FLR3	4.6e-59	78.83	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]
Q9LJW3	3.0e-58	77.54	NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 S...	[more]

BLAST of Cucsat.G15374 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11248.1	1.58e-114	99.38	protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo var. makuwa]	[more]
KAA0058828.1	1.69e-114	99.38	protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo var. makuwa]	[more]
XP_011651296.1	6.48e-111	100.00	protein CUP-SHAPED COTYLEDON 2 [Cucumis sativus] >KGN57633.1 hypothetical protei...	[more]
XP_008456019.1	4.48e-109	99.36	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo]	[more]
XP_038905510.1	2.92e-104	94.23	protein CUP-SHAPED COTYLEDON 2-like [Benincasa hispida]	[more]

BLAST of Cucsat.G15374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ68	7.64e-115	99.38	Protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7UUF0	8.20e-115	99.38	Protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0L787	3.14e-111	100.00	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV...	[more]
A0A1S3C1U0	2.17e-109	99.36	protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4...	[more]
A0A6J1E4T0	2.17e-102	93.46	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143060...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..170 e-value: 1.2E-57 score: 196.0
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 13..167
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 15..141 e-value: 7.8E-40 score: 136.8
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..167 score: 59.458641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..200
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 10..241
None	No IPR available	PANTHER	PTHR31744:SF131	PROTEIN CUP-SHAPED COTYLEDON 2-LIKE	coord: 10..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15374.T1	Cucsat.G15374.T1	mRNA
Cucsat.G15374.T2	Cucsat.G15374.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding