Cucsat.G15323 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15323
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg2009: 1012641 .. 1013745 (-)
RNA-Seq Expression	Cucsat.G15323
Synteny	Cucsat.G15323

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAGACATAATTCATATGGACATTTTTGACACGTGGATCAACACCAATCTTGGAAAAAATAGAGTTTAAAAAATCAAAACGTACATTATCCAAAAGAAAGAGGAAGAAGAAGAGGAGGAGGAAGAAAGGAAGGAAGAAAGAAGATGTTAGGATTCTCGAAAGCAGAGTCAAAATCAAAATCCTAAAACTCCAGAATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCTGTGATTGCTTCGCCTCCCCCGTCTGCCGCAACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAATAATTAGTAGAAATTGTTGAGAATTAAGTGGAATTGTTAGTGATTGATGTGGAAAATTTTGTTGGTTTTGTAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGGTGCGTATGCGTCTGTTTAAATCTTCCAAGTTTATTTTCTTTGATCTTATTTGATTTGAATGGTGATCCTTAATGATTGGTTGAGTTTTGGGGATGTTGCAGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAACAACATTTTTCTCTTTCTTTTTTCTATATTTCTCCTCACATTTCTTTTTTCTCTTTCCTTTATTTCATTTATGAAATAAATTTTATGTCATTCTTTTTCCCCTAAAAACAATTCCTTCCAAATGCTGGATTACTTTAATTACAATATAATATTTTAATACTAATTCAAGTATTATAATCACTAATATTCATCACTCACTGCAACTACTTTACTTTTTAGGGACTTATACCAATTAAATTGTAATCTATTACATTATTATCATTATTTTAT

Coding sequence (CDS)

ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCTGTGATTGCTTCGCCTCCCCCGTCTGCCGCAACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAA

Protein sequence

MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP

Homology

[Close]

BLAST of Cucsat.G15323 vs. NCBI nr
Match: XP_004140725.1 (uncharacterized protein LOC101203967 [Cucumis sativus] >KGN57482.1 hypothetical protein Csa_010520 [Cucumis sativus])

HSP 1 Score: 299 bits (765), Expect = 2.20e-101
Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 165

[Close]

BLAST of Cucsat.G15323 vs. NCBI nr
Match: XP_008456185.1 (PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo] >KAA0037215.1 uncharacterized protein E6C27_scaffold379G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 288 bits (738), Expect = 2.87e-97
Identity = 150/166 (90.36%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASP P
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPLP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSAT+SEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATVSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 165

[Close]

BLAST of Cucsat.G15323 vs. NCBI nr
Match: XP_022934222.1 (uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata] >KAG6581244.1 hypothetical protein SDJN03_21246, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017976.1 hypothetical protein SDJN02_19842 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257 bits (657), Expect = 6.07e-85
Identity = 134/166 (80.72%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           M++HVKGP PP P  L HPNWN+ V+RFTAPLALT ++CRIATTAAAILAAA VI SP P
Sbjct: 1   MISHVKGPFPPIP-ALAHPNWNSAVVRFTAPLALTRASCRIATTAAAILAAAVVIVSPAP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAA E+S+ LSEQQEES+TLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAAVESSSNLSEQQEESTTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 164

[Close]

BLAST of Cucsat.G15323 vs. NCBI nr
Match: XP_023526623.1 (uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257 bits (656), Expect = 8.61e-85
Identity = 134/166 (80.72%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           M++HVKGP PP P  L HPNWN+ V+RFTAPLALT ++CRIATTAAAILAAA VI SP P
Sbjct: 1   MISHVKGPFPPIP-ALAHPNWNSAVVRFTAPLALTRASCRIATTAAAILAAAVVIVSPAP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAA E+S+ LSEQQEES+TLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAAIESSSNLSEQQEESTTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 164

[Close]

BLAST of Cucsat.G15323 vs. NCBI nr
Match: TYK13858.1 (uncharacterized protein E5676_scaffold832G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (650), Expect = 2.40e-84
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASP P
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPLP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSAT+SEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATVSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRR 138
           CIRGGDGSPGEGPLNIRR
Sbjct: 121 CIRGGDGSPGEGPLNIRR 138

[Close]

BLAST of Cucsat.G15323 vs. ExPASy TrEMBL
Match: A0A0A0LA46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198460 PE=4 SV=1)

HSP 1 Score: 299 bits (765), Expect = 1.06e-101
Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 165

[Close]

BLAST of Cucsat.G15323 vs. ExPASy TrEMBL
Match: A0A5A7T6W8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001300 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 1.39e-97
Identity = 150/166 (90.36%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASP P
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPLP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSAT+SEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATVSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 165

[Close]

BLAST of Cucsat.G15323 vs. ExPASy TrEMBL
Match: A0A1S3C289 (uncharacterized protein LOC103496200 OS=Cucumis melo OX=3656 GN=LOC103496200 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 1.39e-97
Identity = 150/166 (90.36%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASP P
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPLP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSAT+SEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATVSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 165

[Close]

BLAST of Cucsat.G15323 vs. ExPASy TrEMBL
Match: A0A6J1F235 (uncharacterized protein LOC111441457 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441457 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 2.94e-85
Identity = 134/166 (80.72%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           M++HVKGP PP P  L HPNWN+ V+RFTAPLALT ++CRIATTAAAILAAA VI SP P
Sbjct: 1   MISHVKGPFPPIP-ALAHPNWNSAVVRFTAPLALTRASCRIATTAAAILAAAVVIVSPAP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAA E+S+ LSEQQEES+TLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAAVESSSNLSEQQEESTTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCVCVCLNLPSLFS 166
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY C+  C ++ +L  
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY-CLVECSDICNLIG 164

[Close]

BLAST of Cucsat.G15323 vs. ExPASy TrEMBL
Match: A0A5D3CRP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00430 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.16e-84
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASP P
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPLP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSAT+SEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATVSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRR 138
           CIRGGDGSPGEGPLNIRR
Sbjct: 121 CIRGGDGSPGEGPLNIRR 138

The following BLAST results are available for this feature:

BLAST of Cucsat.G15323 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15323 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140725.1	2.20e-101	93.37	uncharacterized protein LOC101203967 [Cucumis sativus] >KGN57482.1 hypothetical ...	[more]
XP_008456185.1	2.87e-97	90.36	PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo] >KAA0037215.1 unc...	[more]
XP_022934222.1	6.07e-85	80.72	uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata] >KAG6581244...	[more]
XP_023526623.1	8.61e-85	80.72	uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
TYK13858.1	2.40e-84	96.38	uncharacterized protein E5676_scaffold832G00430 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G15323 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA46	1.06e-101	93.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198460 PE=4 SV=1	[more]
A0A5A7T6W8	1.39e-97	90.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C289	1.39e-97	90.36	uncharacterized protein LOC103496200 OS=Cucumis melo OX=3656 GN=LOC103496200 PE=...	[more]
A0A6J1F235	2.94e-85	80.72	uncharacterized protein LOC111441457 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3CRP5	1.16e-84	96.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..83
None	No IPR available	PANTHER	PTHR36006:SF2	BNAC02G25390D PROTEIN	coord: 29..171
None	No IPR available	PANTHER	PTHR36006	BNAC02G25390D PROTEIN	coord: 29..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15323.T1	Cucsat.G15323.T1	mRNA
Cucsat.G15323.T2	Cucsat.G15323.T2	mRNA