Cucsat.G14912 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G14912
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	fasciclin-like arabinogalactan protein 12
Location	ctg1869: 7368134 .. 7370424 (+)
RNA-Seq Expression	Cucsat.G14912
Synteny	Cucsat.G14912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAACACCAAACTTTTCCAGCCTTTTCTCGTTCTCATCTTTGCATAAAAAGCCCCCTTTGGCTCCTTTCTCTTCACTACCACAACACCAAAATAATCTTCAAATTTTTGTTCCTTTGGTCTTCTTTAGTCTTTGGAGTGTCCATTATTGTTATTATTAATACTAATAGTAATATTATTTCTTTTTTTCGAGCTAGATCGAGAGAGAAAAAGATGGCGAATAGCCTCTTCTCTCTCGTAATATTGCTTATCTTCTTCTTTCTCGATTGCAGCTATGGGCAGTCACCGGCGGAGGCTCCGGGGCCACCGCCGCCGATGAATATCACAAAAATATTGGAAAAGGGTGGCCAATTTAATGTTCTAATAAGGCTTTTGAAGAACACACAAGTCGCCAACCAAATCAACACTCAGCTCAATGACTCCAATTCTGAACTCACCCTTTTTGCCCCAACTGATAATGCTTTCTCCAACCTTCAATCTGGTATATATCATTTTTTTTCTTCTCCAATATTTTCTAATATACTTTTTACCTATATATATATATATATATATTTGTATTTTGTATACAGTATTTAAGGAGTTCTTGTGTTTATTTAAAAGTACTTTTAATACAAAATGATGGCTAATGAATTATTTTATATAGCAATATATTTAGGTGTTTCAGGAGTTGAATCTAAAATTGAAAAAGAAAAAAATTGTTTATCATATGACAAAAGTGTGGTTGTACTATTGGGTGGATTAATTAAGAAGGTGGTGTAGCTCATCATGTATTTAATTAATTTTCAATTTTATTCCTGAAAAGTGTTTAATTTCTTTTAGTTGAAAAGACACTTTAGCAAAAAAAAAAAGTGTTTTTTTCCCTTTCTAAAACCCTTTTTATAAATAGTACTTTTGAAAAAAAAAATATTTCTGTAAAAGATTCAACAAAAGTACTATGATCTCCATTCACTAGGGTAAACAAATAATGAATGTGTAAATCTATGTCATTTATTAAAAGAGTAAGAAAAATCGACCAAAATACCCAAAGTCTCAACAATTGGATAAAATTCTTTGGTCTTCTAAAATTTTATAAACTTAATAGTTTGTGGTTAAAAACACTTTTTTGAATTTTCAGTTTGGACGAAAGCAATAATTTAATTTTTAAGTTTTTGCTGATTTCATCTAAAAATATATAGTTTTTGTATTATTGAATTTATAACAATTTAATCATTTAATCATTTAATCTCCAAATTTTATAATTTGGAATGATTACTAGTTCATGTCATAAAAAATTTGATCAGAATTATTTAACATTAGTTTTGATTGCATAATCAGTTGATGTTTACAATTTATAGATATTCTTAAGGATGTAGATAAATGTACATGTAAAAAAAAAAGAGTAAATCATACTAATATTTAAAGGATAAAAATGGGTATAAATTTGAATGATTTCCATTATTACAAAACAGGCACACTCAATTCCCTCAATGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCTACTTTCTTGTCTTTATCAAACTTCCAAACAATCAGCAATCCGGTGAGAACTCAGGCCGGAGACGCCTACGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGCCTCGTCAACACCTCCATCTCCGGCACTGTCTATACCGACAACCAGCTCGCCATCTACCAAATCGACTCCGTTCTCAAACCGATTGGTGTCTTCCAGCCTCGTCCCCCGCCCCCGGCTCCCGCACCCGAGAAGTCCAAGAAGAAGGCCAAGGGCAATTCTGAAAGCCCTAAGGATTCCGACGATGACAACTCCTCCGCCGTGCCTCTTGCTGGGGTCTCGGTCATCTCGACCGGAGCTGCTGTTGTCGTCGGAATAATGTTGGTTTGGATAAATTCTTGACCTAATTTGCTTGGGTGTTTTCTCGGAGAGGTTTCAATCTATTGTACTTTTTGCTATTGGTTTTATTTTTGTGTATTATAAATTGAAGTTGGATTGTGTTGCTTTGTTTTAGGGTATTGTTCTTGATTTTTGTTTCTCTCTTTTTTTTTTCCATCCAACGTTCGTGTTAAATTTAATTAAGAATATTTTATCGTGAGAAAAGAAAATGTATAATATTTTTATATTAAAAAGATTTTGTTAGCAAATTTCCAATTGGATCAATTTCATCAATCCTCTCTCTCTCTCTATAAATACACAGAGCAAACACAAAGGCTAATTAAACTCACCGGAATTTTCAAACACAGAGAAAGCACAACCTCAGCTTTCACAGACTGCACAC

Coding sequence (CDS)

TCCAAACACCAAACTTTTCCAGCCTTTTCTCGTTCTCATCTTTGCATAAAAAGCCCCCTTTGGCTCCTTTCTCTTCACTACCACAACACCAAAATAATCTTCAAATTTTTGTTCCTTTGGTCTTCTTTAGTCTTTGGAGTGTCCATTATTGTTATTATTAATACTAATAGTAATATTATTTCTTTTTTTCGAGCTAGATCGAGAGAGAAAAAGATGGCGAATAGCCTCTTCTCTCTCGTAATATTGCTTATCTTCTTCTTTCTCGATTGCAGCTATGGGCAGTCACCGGCGGAGGCTCCGGGGCCACCGCCGCCGATGAATATCACAAAAATATTGGAAAAGGGTGGCCAATTTAATGTTCTAATAAGGCTTTTGAAGAACACACAAGTCGCCAACCAAATCAACACTCAGCTCAATGACTCCAATTCTGAACTCACCCTTTTTGCCCCAACTGATAATGCTTTCTCCAACCTTCAATCTGGCACACTCAATTCCCTCAATGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCTACTTTCTTGTCTTTATCAAACTTCCAAACAATCAGCAATCCGGTGAGAACTCAGGCCGGAGACGCCTACGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGCCTCGTCAACACCTCCATCTCCGGCACTGTCTATACCGACAACCAGCTCGCCATCTACCAAATCGACTCCGTTCTCAAACCGATTGGTGTCTTCCAGCCTCGTCCCCCGCCCCCGGCTCCCGCACCCGAGAAGTCCAAGAAGAAGGCCAAGGGCAATTCTGAAAGCCCTAAGGATTCCGACGATGACAACTCCTCCGCCGTGCCTCTTGCTGGGGTCTCGGTCATCTCGACCGGAGCTGCTGTTGTCGTCGGAATAATGTTGGTTTGGATAAATTCTTGA

Protein sequence

SKHQTFPAFSRSHLCIKSPLWLLSLHYHNTKIIFKFLFLWSSLVFGVSIIVIINTNSNIISFFRARSREKKMANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWINS

Homology

[Close]

BLAST of Cucsat.G14912 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 6.3e-62
Identity = 137/244 (56.15%), Postives = 179/244 (73.36%), Query Frame = 0


Query: 78  SLVILL--IFFFLDCSYG----QSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 137
           SL+ILL  +   L  + G     SPA AP PP P N+TKILEK GQF V IRLLK+T VA
Sbjct: 4   SLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVA 63

Query: 138 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 197
           NQ+  QLN+S++ +T+FAP+D++F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT
Sbjct: 64  NQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQT 123

Query: 198 ISNPVRTQAGDAYE--FPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKP 257
           ISNP+RTQAGD+ +  FPLNVTTSGN+VN++SG+ NT++SG VY+D QLA+YQ+D VL P
Sbjct: 124 ISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLP 183

Query: 258 IGVFQPRPPPPAPAP--EKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGI 312
             VF PRPP PAPAP   KSKKK   +  S  DS  D S A+   G SV    +  V+ +
Sbjct: 184 QQVFDPRPPAPAPAPSVSKSKKKKDDSDSSSDDSPADASFALRNVG-SVCDAVSFCVMSV 243

[Close]

BLAST of Cucsat.G14912 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-54
Identity = 120/238 (50.42%), Postives = 169/238 (71.01%), Query Frame = 0


Query: 81  ILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQINTQLND 140
           + + F  +  +YGQ+P  APGP  P NIT ILEK GQF + IRLLK+TQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAP--APGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 141 SNSE-LTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTISNPVRTQ 200
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQT+SNP+RTQ
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQ 131

Query: 201 AGDAY--EFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVFQPRP 260
           AGD    +FPLN+T+SGN VN+++G+V+ +++ +VY+D QLA+YQ+D VL P+ +F    
Sbjct: 132 AGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSS 191

Query: 261 PPPAPAPEKSKKKAKGNSESPKDSDD--DNSSAVPLA-GVSVISTGAAVVVGIMLVWI 313
             PAPAPEK    +KG++    D  D  D+S A     G  +  T  A +     +WI
Sbjct: 192 VAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIAASSSLWI 246

[Close]

BLAST of Cucsat.G14912 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-38
Identity = 106/249 (42.57%), Postives = 146/249 (58.63%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           MA +   L++L   F       Q  A APGP  P+NIT ILEKGGQF  LIRLL  TQ+ 
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIG 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQIN Q+N S+  +T+ APTDNAF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +
Sbjct: 61  NQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLS 120

Query: 192 ISNPVRTQAGD---AYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLK 251
           +SNPVRTQA        + LN T  GN VNVS+G+V T +S ++  +  LA+Y +D VL 
Sbjct: 121 VSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLL 180

Query: 252 PIGVFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSS---AVP----LAGVSVISTGA 311
           P  +F  R   P   P KSK        SP  SDD  SS   A P     +G   ++TG 
Sbjct: 181 PEEMFGERKISPMAPPPKSK--------SPDVSDDSESSKKAAAPSESEKSGSGEMNTGL 240

[Close]

BLAST of Cucsat.G14912 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 4.9e-38
Identity = 111/246 (45.12%), Postives = 149/246 (60.57%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGP---PPPMNITKILEKGGQFNVLIRLLKNT 131
           M++SLFS V+LLIF F    Y QS   AP P     P+N+T ILE G QF  LI+LL  T
Sbjct: 1   MSSSLFSYVVLLIFLF-TIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTT 60

Query: 132 QVANQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSN 191
           QV  Q++ QLN S+  +T+FAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+
Sbjct: 61  QVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 120

Query: 192 FQTISNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLVNTSISGTVYTDNQLAIYQID 251
               SNPVRTQA   D   F LN T     N VNVS+G+V T I+  +     LA+Y +D
Sbjct: 121 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVD 180

Query: 252 SVLKPIGVFQPRPPPP-APAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAV 310
           SVL P  +F  +  P  APAP+ S   +  +S +   +DD++ S    AG SV  T   +
Sbjct: 181 SVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPA---ADDEHKS----AGSSVKRTSLGI 238

[Close]

BLAST of Cucsat.G14912 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.5e-34
Identity = 87/208 (41.83%), Postives = 125/208 (60.10%), Query Frame = 0


Query: 75  SLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQI 134
           +L  L+++        +  Q  A AP P  P+N+T ILEKGGQF   I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 135 NTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTISN 194
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  ++SN
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSN 126

Query: 195 PVRTQAG--DAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGV 254
           PVRTQA   D   + LN T   N +NVS+G V T IS ++     LA+Y +D VL P  +
Sbjct: 127 PVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEM 186

Query: 255 F-QPRPPPPAPAPEKSKKKAKGNSESPK 280
           F + +  P APAP+        +S S K
Sbjct: 187 FGEHKLSPIAPAPKSKSGGVTDDSGSTK 214

[Close]

BLAST of Cucsat.G14912 vs. NCBI nr
Match: XP_004148768.1 (fasciclin-like arabinogalactan protein 12 [Cucumis sativus] >KGN64742.1 hypothetical protein Csa_013747 [Cucumis sativus])

HSP 1 Score: 461 bits (1186), Expect = 4.80e-162
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA
Sbjct: 1   MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT
Sbjct: 61  NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 120

Query: 192 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 251
           ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG
Sbjct: 121 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 180

Query: 252 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 311
           VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW
Sbjct: 181 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 240

Query: 312 INS 314
           INS
Sbjct: 241 INS 243

[Close]

BLAST of Cucsat.G14912 vs. NCBI nr
Match: XP_008463798.1 (PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis melo] >KAA0056760.1 fasciclin-like arabinogalactan protein 12 [Cucumis melo var. makuwa] >TYJ97585.1 fasciclin-like arabinogalactan protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 443 bits (1140), Expect = 4.86e-155
Identity = 232/243 (95.47%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           M NSLFSLVILLIFFF+DCSYGQSPAEAPGPPPPMNI+KILEKGGQFNVLIRLLK+TQVA
Sbjct: 1   MGNSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVA 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQINTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT
Sbjct: 61  NQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 120

Query: 192 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 251
           ISNPVRTQAGDAYEFPLNVTTSGNSVN+SSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG
Sbjct: 121 ISNPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 180

Query: 252 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 311
           VFQPRPPPPAPAPEKSKKKAKG SESPKDSDDDNSSAVPLAG+S  ST AAVVVGIMLVW
Sbjct: 181 VFQPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVVVGIMLVW 240

Query: 312 INS 314
           INS
Sbjct: 241 INS 243

[Close]

BLAST of Cucsat.G14912 vs. NCBI nr
Match: XP_038895104.1 (fasciclin-like arabinogalactan protein 12 [Benincasa hispida])

HSP 1 Score: 426 bits (1095), Expect = 3.58e-148
Identity = 227/244 (93.03%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           MANSLFSLVIL+ F FL CSYGQSPAEAPGPPPPMNITKILEKGGQFN+LIRLLK+TQVA
Sbjct: 1   MANSLFSLVILVSFLFLGCSYGQSPAEAPGPPPPMNITKILEKGGQFNILIRLLKSTQVA 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQI+TQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT
Sbjct: 61  NQIDTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 120

Query: 192 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 251
           ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLA+YQIDSVLKPIG
Sbjct: 121 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAVYQIDSVLKPIG 180

Query: 252 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVS-VISTGAAVVVGIMLV 311
           VFQPRPPPPAPAPEKSKKKAK  SESPK+S DDNSSAVPLAG+S V ST AAVVVGIMLV
Sbjct: 181 VFQPRPPPPAPAPEKSKKKAKAISESPKNSADDNSSAVPLAGMSSVFSTRAAVVVGIMLV 240

Query: 312 WINS 314
           WINS
Sbjct: 241 WINS 244

[Close]

BLAST of Cucsat.G14912 vs. NCBI nr
Match: XP_022964662.1 (fasciclin-like arabinogalactan protein 12 [Cucurbita moschata])

HSP 1 Score: 408 bits (1049), Expect = 3.35e-141
Identity = 210/241 (87.14%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 74  NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 133
           N+LFSL+I  ++ F+  SYGQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61

Query: 134 INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 193
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121

Query: 194 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 253
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181

Query: 254 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 313
           QPRPPPPAPAPEKSKKKAK  SE+PKDS DDNSSAVPLAG+S   TGAA V GIMLVWIN
Sbjct: 182 QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWIN 241

[Close]

BLAST of Cucsat.G14912 vs. NCBI nr
Match: KAG6583491.1 (Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 408 bits (1048), Expect = 4.76e-141
Identity = 210/241 (87.14%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 74  NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 133
           N+LFSL+I  ++ F+  SYGQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61

Query: 134 INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 193
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121

Query: 194 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 253
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181

Query: 254 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 313
           QPRPPPPAPAPEKSKKKAK  SE PKDS DDNSSAVPLAG+S   TGAA V GIMLVWIN
Sbjct: 182 QPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWIN 241

[Close]

BLAST of Cucsat.G14912 vs. ExPASy TrEMBL
Match: A0A0A0LVA0 (Arabinogalactan protein 2 OS=Cucumis sativus OX=3659 GN=Csa_1G085380 PE=3 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 2.32e-162
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA
Sbjct: 1   MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT
Sbjct: 61  NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 120

Query: 192 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 251
           ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG
Sbjct: 121 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 180

Query: 252 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 311
           VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW
Sbjct: 181 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 240

Query: 312 INS 314
           INS
Sbjct: 241 INS 243

[Close]

BLAST of Cucsat.G14912 vs. ExPASy TrEMBL
Match: A0A5A7UNV5 (Fasciclin-like arabinogalactan protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00050 PE=3 SV=1)

HSP 1 Score: 443 bits (1140), Expect = 2.36e-155
Identity = 232/243 (95.47%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           M NSLFSLVILLIFFF+DCSYGQSPAEAPGPPPPMNI+KILEKGGQFNVLIRLLK+TQVA
Sbjct: 1   MGNSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVA 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQINTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT
Sbjct: 61  NQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 120

Query: 192 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 251
           ISNPVRTQAGDAYEFPLNVTTSGNSVN+SSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG
Sbjct: 121 ISNPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 180

Query: 252 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 311
           VFQPRPPPPAPAPEKSKKKAKG SESPKDSDDDNSSAVPLAG+S  ST AAVVVGIMLVW
Sbjct: 181 VFQPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVVVGIMLVW 240

Query: 312 INS 314
           INS
Sbjct: 241 INS 243

[Close]

BLAST of Cucsat.G14912 vs. ExPASy TrEMBL
Match: A0A1S3CKI9 (fasciclin-like arabinogalactan protein 12 OS=Cucumis melo OX=3656 GN=LOC103501848 PE=3 SV=1)

HSP 1 Score: 443 bits (1140), Expect = 2.36e-155
Identity = 232/243 (95.47%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 72  MANSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVA 131
           M NSLFSLVILLIFFF+DCSYGQSPAEAPGPPPPMNI+KILEKGGQFNVLIRLLK+TQVA
Sbjct: 1   MGNSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVA 60

Query: 132 NQINTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 191
           NQINTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT
Sbjct: 61  NQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 120

Query: 192 ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 251
           ISNPVRTQAGDAYEFPLNVTTSGNSVN+SSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG
Sbjct: 121 ISNPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQIDSVLKPIG 180

Query: 252 VFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVW 311
           VFQPRPPPPAPAPEKSKKKAKG SESPKDSDDDNSSAVPLAG+S  ST AAVVVGIMLVW
Sbjct: 181 VFQPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVVVGIMLVW 240

Query: 312 INS 314
           INS
Sbjct: 241 INS 243

[Close]

BLAST of Cucsat.G14912 vs. ExPASy TrEMBL
Match: A0A6J1HIC8 (fasciclin-like arabinogalactan protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111464673 PE=3 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 1.62e-141
Identity = 210/241 (87.14%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 74  NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 133
           N+LFSL+I  ++ F+  SYGQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61

Query: 134 INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 193
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121

Query: 194 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 253
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181

Query: 254 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 313
           QPRPPPPAPAPEKSKKKAK  SE+PKDS DDNSSAVPLAG+S   TGAA V GIMLVWIN
Sbjct: 182 QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWIN 241

[Close]

BLAST of Cucsat.G14912 vs. ExPASy TrEMBL
Match: A0A6J1HZ28 (fasciclin-like arabinogalactan protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111469411 PE=3 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 5.40e-140
Identity = 208/241 (86.31%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 74  NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 133
           N+LFSL+I  ++ F+  S+GQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 2   NTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61

Query: 134 INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 193
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121

Query: 194 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 253
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181

Query: 254 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 313
           QPRPPPPAPAPEKSKKKAK  SE PKDS DDNSSAVPL G+ V  TGAA V GIMLVWIN
Sbjct: 182 QPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWIN 241

The following BLAST results are available for this feature:

BLAST of Cucsat.G14912 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEE9	6.3e-62	56.15	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEJ6	3.7e-54	50.42	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9FFH6	2.9e-38	42.57	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	4.9e-38	45.12	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q9ZWA8	9.5e-34	41.83	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]

BLAST of Cucsat.G14912 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148768.1	4.80e-162	100.00	fasciclin-like arabinogalactan protein 12 [Cucumis sativus] >KGN64742.1 hypothet...	[more]
XP_008463798.1	4.86e-155	95.47	PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis melo] >KAA0056760....	[more]
XP_038895104.1	3.58e-148	93.03	fasciclin-like arabinogalactan protein 12 [Benincasa hispida]	[more]
XP_022964662.1	3.35e-141	87.14	fasciclin-like arabinogalactan protein 12 [Cucurbita moschata]	[more]
KAG6583491.1	4.76e-141	87.14	Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Cucsat.G14912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA0	2.32e-162	100.00	Arabinogalactan protein 2 OS=Cucumis sativus OX=3659 GN=Csa_1G085380 PE=3 SV=1	[more]
A0A5A7UNV5	2.36e-155	95.47	Fasciclin-like arabinogalactan protein 12 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CKI9	2.36e-155	95.47	fasciclin-like arabinogalactan protein 12 OS=Cucumis melo OX=3656 GN=LOC10350184...	[more]
A0A6J1HIC8	1.62e-141	87.14	fasciclin-like arabinogalactan protein 12 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HZ28	5.40e-140	86.31	fasciclin-like arabinogalactan protein 12 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 41..145 e-value: 1.3E-21 score: 87.8
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 12..144 e-value: 5.8E-22 score: 78.3
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 1..142 score: 20.963839
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 1..144 e-value: 6.5E-19 score: 70.6
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 2..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..178
None	No IPR available	PANTHER	PTHR32077:SF38	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12	coord: 1..203
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G14912.T1	Cucsat.G14912.T1	mRNA
Cucsat.G14912.T2	Cucsat.G14912.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009733	response to auxin
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009651	response to salt stress
biological_process	GO:0090376	seed trichome differentiation
biological_process	GO:0090378	seed trichome elongation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane