Cucsat.G1489 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1489
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein CLT1, chloroplastic
Location	ctg1000: 222283 .. 229390 (-)
RNA-Seq Expression	Cucsat.G1489
Synteny	Cucsat.G1489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCGCTTTCCTCATATAATTATTTTATTATGGAGCGAAATTCGACGAGCCTTTAAACCATTCAAGGGAAGCAAAGAAGAACACAGAGCACCGCGAGAGCGATACAATTGAAACGCGGCTCCCCTCTCTTTGAATTTTCCGGCCATAAATTCACCGCTAATTGTATTATGACATCATGGTCCCACCGGTTCTCCGCCGGTACCGCCTCATTCGGCGGTCCTTTCCGACTACGGCAACGACCGCGAAGCCTCCCGGAGGTGAGCATTTATAGAAACGATGATTTACGGTCCGGGTGTGGATGTGTAATTCTACGTGCTCCGAAGCACCGGCGGCTGGAGGCGGTGGCGCCGTCCGGAGCTTGGGATCTATCGGATAGCGGAGAGGAGGATAGGGTGAAGCCCTGTTCGTATGCAGTGGGAGATCAGAGGGTGGAGGATTTAGCGGAAGGGAAGAGCGGCGAGATCTTGGAGAATATTAGGGCGGAGAAATTGAGGAGAAGCGATCGGAAGGTGGAGATAGTGGTAGCGGCGGCGTCGACGGTGATTTTCGGTGTAGCCAATCGGGTGTTGTACAAGCTCGCTTTGGTTCCTCTAAAGCACTACCCGTTCTTTCTCGCTCAGCTCGCCACTTTCGGGTACTTACCGTCATTTTCTCTCCATTTTTTCTCCTCTGAATCTTAATCAGTACCTTCAAAATTACATTTCCTATTCCATTAACTTGATTTAAACCTGATTATCGTCAATTTTAGTTAAACATATCTGGTATCTGAATTTAGTCCTTTGATTTGTGATTCTTCTTTGAATTCGGTTGAGTCATTTTCGGCGATCAAGCCAATTAAATCCACTTTCTGTTCTTCATTCCTTATCCTGTTCTTCAGTTTTCCAATTCAATCATTGACTGTAACAATGTGGTGGATAATTTTACAGAGTCAAGTTGCAAAATACGTTTCGAATTTTTTGAATACGACGGTTTACAATTTACATCATTTCGCCACATTTTTCAAATTAAAAGAAAATTGTTCTTTAGCGACTCCGTCGTTTTCTGAAAGATTTGTAATTACATTTTTAATTTAGTGCAAATTTATTCAAAACAGATGAATCTTACACAACTCTGGTTGTAAAAAGGAACTATTCGATTGAAACACAATTTCTGGTAAAATTCTCTAATTAAGGAATTGAAACTATAAAAAGCCGTGGCGGCTTACTGTTTGATAATTTTCGTCTTTCCATTCACGTTGGGTCCTTGAATTTTTGAAAACAAAATAGTAATAATTTGTTGAAGTCATTGATCTAAGAGTTTGTTTTATTTTAGTTATTTTCAATTAATTGTTCGATTATGTATTTTCCAAAAATTGTAAATCTTAAATTTGGTTGATTTTTTTGGGTTCTTTCAAAAATAGAAAAGAAAAACCCCACTAATATCAAAATTCTTTCTACTTTTGACAATTTTACTTTTCATCATAAATTTTGAAAACTTATTAATGTGTGGTTTTTTTCTCTACATTAAAGGATTCTTATCATTATTTAACAGTAAAGATTAGATTTGTTGAAGAAGTGTTAAGGATTAAAATTGAAATATGACTAAAATTGAAACAAATTCAAATATGAATATAAAAAAGGAAGATATTTTAACTTTAGTAAATAATCTTATTCTTTCAATTATCTTGTGCCTTCTCTGACTATTTCAAAACCACTTTTAAAAGTAGAAATTTGGAGGAATATAATCTTACTTTTATGTATCTTTAAATTTGAAGTGGATGGGTTTGAGCACTTTTTAAACATAACTATGATGGGGTTTATTAAAAAGAAAGAAAGAATAGGAATCTAAGAACTAAACAAAAAAATCATCCTGAATTCATCTAGTGGCAAAAGATGTTATAGGATGATGAGTAATCCATTTTCTACAAATTTTTCTTTTAACATCCAAATGTTTTAGGAATGGAGGTGATGGAACATTTGTGATAAAAGAAAAATTGAGACTCAAGAACTGTTGTAGATACTTATTTTAGAAAGGTGGAAAGATTAAGCTAAAAGTGGTTAAGTGTTTTTAGAATAAAGATACGCAAAGCATGACGATATCTTGCACTTTGGTTACAAATTGGGTTTTGGCAGTTGAATAGTTAATGTTGAAACTTAAAACTGACCCCACTTGTCTTGTACTAAAGGGAAAAGAGAATTCAAAGTGGGGTAATAAATAATGTGTTTATTTTCTTTGATCTATCACTATTAAATAATTGAAAGGTTATTCTAACTGATATTTAAGCAATAAACTATATATTATTATATTTATAAATATTTTAGTTCATTTATTATATTTAAAACAATTTAAAATATATAAAAGTTATCTGTAAATGTTTTTATAAGTCTATCTTGATCTATTCTAGTCTATCACAGGTAAATTGTAATATTTTACGATATTTGTAAATATAGTAAAATAATTGTATAGCAAAATTTCAATTTCTATAAATAATAATAATTGATAGACACTAATATGTTTCTATTTGTGATATTGATAGACAATGATAAAAGTTAGTTAGAATCTAAAATTTTAGAGTAACTTGTCAATATTCTAATTTATTTTATTATTTTTTAGAATGCATTTATTTGTAAATATTTTTAAAAATTTTATTGTTTAAAATAACTTCACTTGCAAAGAAAAAGCTTTATGTTTGAATGATATAGGGTTTTTTTTTATATAGAAAAAGTAAAGCTTTTGGCAAGGTTGGATGTATAATGGTGGGTCCAGTTTGAATGTGCATCACACTTTATATGCTCATTATCAATCATTAAAGGTGGAAACGATGTCGTGTTAGTAGTTTGCTTACACGAAAATATCTTTTTCAGTGATGCACTTTTCCATTTTTCTGTCACACCGAGGAGTCTTTGGCGATTTTTGCTTCTTCCAATGTGGTCCTGAGAAAGACAAATTCGCTTTTCATGTCAATTTCAAATCGTTTTGTTGCATAATATAGAAAACCTCCCATCTTGTTGTTGTTACTATTATTATAATATAAAGAAGATCCAAACATGAAAAGAGTTTTTAATTCATTTGCTTTCTAGTCCCACGGCTGCCCTCCAATTTAAATAACTTTAACTTTAATATAGCTCACACCCCACCATTTCCTTCCCTTTTCCCTTCTCCTTTTTCTATCTTTTTTTTCTAATTTAATTAATGAAAAATAAATGGATGAACCAACATATTGCAAAATTTCACTATCTATTATCATGGTCTACTTCTATCTATAGGAAATTTTATTATATTTTTAAATATTTATGGCAGTTTGGACATTTAAAACAGTTGATGAAGATTCAGGAGATTTTTCATTTTCGTTCCATCAGGAATCCACTTTGATCTTCACTGAACTTGTCCATTACACAATATATTTTTCTGATCAAATTAGTACACCAAGTTTTCAGCTTTACTGTTTCATATCATACCTATATTTTACAAACTACAGCAGCTCTGTATGGCCGACTGTGCAAATCGTAATTGTATTGGTTCATATCATACCCACATTTTATAAGTTGAAGAAACTCTCTATAGCCGACTGTTTTTTTTGCTGATTATCATATCACTGCTGCTGCTTCACTGAACTACATATATGCTTTGCATTTAAACTGTTTAATTATCTATGTATTGTTTCATACATTTGGCTCTTTGGTTGGCACTCATTTGTATCTGCAAGCGTCTTGATTGGTTAAATTGATTTCTTACGATTCTGTTCTTTTCCAGGTATGTAATTGTTTACTTTTCTATTTTGTATCTACGGTATCACGCTGGCATTGTTACGGATGAGATGCTTTCCACACCGAAGGCCCCATATATTGTTGCTGGTCTCTTGGAAGCTCTTGGTGCTGCGACAGGGATGGCAGCAGCAGGTAATGCCTTTTATAACAAGTTCCCTCACCTCTACGTTTCTTTTTAATATATATAGGCTTCTATTTTATGTATATATTAAACATTAGCTGTCTATTCATCTACTGTTAAGTTTTTGATTAAAAAGGAGGAGGTCATGACAGATAAAGATTAGTGATTAAATTGCCTTGGTCAACAGTATATCACATTACCATGAACCTTTCGAAGTTGATATTTTTTTGTTATAGTAAATTTACCTATTTAGTTAATTCCTAACATTTTTGCTCAATTTCAGCCTGTATATTACATCTCCTTCGTAATTGTTACAATTTTCAATTTTGTAATTAGATAATTGTATCCTTGTTTAATTAATCTAACTTGTGTTATTTTCCTTGGATTAGCCATTCTTTCTGGAGCATCTATTCCAGTATTGTCTCAGGTACAGCAGAGCAATCATTTCCCCTTTAATAATAAATCACTTCACTCATTTAAAAGACTGCTCGTCCTAAATTAATCCTAAGAATGGAGCGTGTACATTCTTTTGATCGGATTATTAAACAAACAAGAGTTTTTCCTCTATACATAGAGTCTTAAATATATAAGTCGAGTAAATCCAGTTACTACTATTATTACAAATATTTTTGCATAGCCTTCTCTTTGTTAAGCATGCAAGTAATTACAGTTCATTTTGTTTGCAGACTTTCCTTGTGTGGCAAATTCTCTTGTCAACTATTTTCCTTGGGCGGAGGTACAAGACCAGTCAACTTTTCGGATGCTTTTTTGTTACCATTGGTGTAATCATCACTGTTGCGAGGTAATTTTCATTATGGGCCATTAGTACTTGCTCAAAATAACAATATTATCTTAGTTGCTCTGCTCAGAGCTCGAATAAAAAGCATAGCCCGTTGAATATGATATGAAGGAATAAATTTGATATATTTCTGAACTCATTTGATCAGTTAGCACATCGCATGTAGCATCCGTTACTGGAACTATGTTCAATATGATATCTACCAGTGTAGCTTATGAGCAGGATATCTTTAATTGATGTTAAAACCACTTTCATCCGGTTAAGCAGTCTTGGTGTAACCATTGCTTGCACGAATTCCGTTTTAAAGTCATGCTGTCTTAACGATTTTTTTACAGTGGTTCCAACGCTGGGAATTCCTTGAAGGAAGCCGGTATATTTTGGAGCCTTTTGATGATAATCTCATTCTTGTTCCAAGCAGCTGATACAGTTTTGAAGGTAGTTGTTGCCAAAATATCAACTGGTGTCCCAACTTATGGTGCATTTTTTTCCCTCACTCTCTCTCTAATAACAAGCAACAACATCTCTAATATGTAGGAAATCATCTTCTTGGATGCTTCCCGTCAATTGAAGGTATATTGGGCAGTATCTCTTCTTTTCTCTTATTTGATAAGATACAGTTCTCCTTTCTGTTTAAATTTCTTACAGTGTTTTGAAAAGAATATTCTGTGTATGCTGATCATTAATTCTATATAAGAAGGTTTACCCGTAAATCTCTCATTATCCGAAAATCAGGCATAAGGCCATTCTTAAACCAATTTCGTGCACTCAAATTATTGTGAGAGCTTGGTTAAATTGCATCTCTATACTTTTGTTATCATAGGAATTTCAAAATGCATGCTGTTGTGGCCTGAGTTCATTCTACATATGATCCTTAACGCACTGAATTGCTTCTGTACAGGGAAGAACGATCGACTTATTTGTTGTAAATTCCTTTGGATCTGCTTTCCAGGTAGGCAATAGTTAACGCCATCCATTAAATACATCTGTTCTTGATCCCATTTTTCCATTTGTCTACTGTAAATTAAAAGATTAAGAATTTATTTATTTCATGTTAAGTGCAGGCAGTTTTCATACTCGCTCTCCTACCGTTCTTGTCTAAATTATGGGGCATTCCATTTACTCAACTGCCAAGCTATCTTAGAGATGGCGCGGCCTGTTTCCTAAATTATGGTTCTTTAAGCGGTAAGTATGTCTTCTTCTTTTATTTGTTTTGATTATACATATAGTACTCCTCTTTTATTTCCCGAATGCATGTCCATTTAAATAGTTTTTTAGGATATTTGCTCGCTTGAAATTTCAAATGCTGTCATACATTTATCATTTTGAATGTGGTTTGTTCATTCTAACCACTAAAAGGATATTCTGATCGCAGGATGTGATGGCGCACCATTGCTACCTCTTCTTTTTATTCTTGTAAATATAGGGTTTAACATTTCATTGTTGCATCTTCTCAAGATCTCATCTGCCGTGGTTTCTTCTCTTGCATCCACATTCTCAGGTATTTTCTCGCTTCTGTTCTTATAAGAAATCGAAAATAATTTCTTCTTTGATAAATGAAGGATCCTAACTCCCTGACGAACATTTCTTGTCTAGTAAGATTTTAATTCAGCTATAAGGGAAAGTTGGAAAGTCCATCTAAAATTGACATGTTCATGTCCTTCCACGTAAAGGTGGGAAGACATTATCAAAGTCTTTATGCTGAATTAGGCCTTCAATCAGCTCCCTTAACCATGTCCAATATTTTAACCAATCTTCTAACTCTTAGAAAGCTACCACCGTTTTCCTTACACTTTTTCTCATTTACACATTACTTGGATATCCTTTAAAGAAAGTCTGGACACTTTTATATCTTTGATAACATTTTCATTTTCACGAAAACAGTGCCAATATCAGTCTATATGTTCACCTTGCCACTCCCATACATCGGTGTCGCATCCGCTCTTCCATCAGGGTTCGTAGCTGGAGCTGTAATTCTCGTTTTGGGCTTGCTTATCTATGCATGGACACCATCAGGATCATCAGATACTAACAATGCCACCCCTCACGTCCCAACCACTTAAAATCAAAATATAGAATATCAACTTATGCATCACTGCCGTGAAGATGTGCAGTGGAGCTGGTCGGTGAGTTAGAACGAACATCGCGTTCTTCTTGTTCTCCCTTCTTACATTCATCCAATAAAAGGTCTAGTCCATTGCTCGAGTGGCAGCATTTGGGTGCATGTTTCCATAATAATGAAGTAGAAGAGGGTCATTTGTAAGTTAATTAGGATCGTAGAACAGAAATATATATTGTGATGTGATAGTCTGTACAATTAGTGAGTTCTTGTGATTTATGAAGAGCAAGAAATTTAATTTCAAGGTTTGATAGATTAAAAAGAACTGCTGGGGAAGCTATAGATATGTATATTGTACCATTATATTTGTAGGCACCACAATCCTCTTGAAGTTTTTGTATAATAAGTCATTTTGTAACATTAAATCAATATTGTGTACGTGATTTTCTTCTTGCTGATATTTTGCTGGCTTTACAATAAGAATAACACTTTAGCATGGCCTTCATTTGTGATAACTATT

Coding sequence (CDS)

ATGACATCATGGTCCCACCGGTTCTCCGCCGGTACCGCCTCATTCGGCGGTCCTTTCCGACTACGGCAACGACCGCGAAGCCTCCCGGAGGTGAGCATTTATAGAAACGATGATTTACGGTCCGGGTGTGGATGTGTAATTCTACGTGCTCCGAAGCACCGGCGGCTGGAGGCGGTGGCGCCGTCCGGAGCTTGGGATCTATCGGATAGCGGAGAGGAGGATAGGGTGAAGCCCTGTTCGTATGCAGTGGGAGATCAGAGGGTGGAGGATTTAGCGGAAGGGAAGAGCGGCGAGATCTTGGAGAATATTAGGGCGGAGAAATTGAGGAGAAGCGATCGGAAGGTGGAGATAGTGGTAGCGGCGGCGTCGACGGTGATTTTCGGTGTAGCCAATCGGGTGTTGTACAAGCTCGCTTTGGTTCCTCTAAAGCACTACCCGTTCTTTCTCGCTCAGCTCGCCACTTTCGGGTATGTAATTGTTTACTTTTCTATTTTGTATCTACGGTATCACGCTGGCATTGTTACGGATGAGATGCTTTCCACACCGAAGGCCCCATATATTGTTGCTGGTCTCTTGGAAGCTCTTGGTGCTGCGACAGGGATGGCAGCAGCAGCCATTCTTTCTGGAGCATCTATTCCAGTATTGTCTCAGACTTTCCTTGTGTGGCAAATTCTCTTGTCAACTATTTTCCTTGGGCGGAGGTACAAGACCAGTCAACTTTTCGGATGCTTTTTTGTTACCATTGGTGTAATCATCACTGTTGCGAGTGGTTCCAACGCTGGGAATTCCTTGAAGGAAGCCGGTATATTTTGGAGCCTTTTGATGATAATCTCATTCTTGTTCCAAGCAGCTGATACAGTTTTGAAGGAAATCATCTTCTTGGATGCTTCCCGTCAATTGAAGGGAAGAACGATCGACTTATTTGTTGTAAATTCCTTTGGATCTGCTTTCCAGGCAGTTTTCATACTCGCTCTCCTACCGTTCTTGTCTAAATTATGGGGCATTCCATTTACTCAACTGCCAAGCTATCTTAGAGATGGCGCGGCCTGTTTCCTAAATTATGGTTCTTTAAGCGGATGTGATGGCGCACCATTGCTACCTCTTCTTTTTATTCTTGTAAATATAGGGTTTAACATTTCATTGTTGCATCTTCTCAAGATCTCATCTGCCGTGGTTTCTTCTCTTGCATCCACATTCTCAGTGCCAATATCAGTCTATATGTTCACCTTGCCACTCCCATACATCGGTGTCGCATCCGCTCTTCCATCAGGGTTCGTAGCTGGAGCTGTAATTCTCGTTTTGGGCTTGCTTATCTATGCATGGACACCATCAGGATCATCAGATACTAACAATGCCACCCCTCACGTCCCAACCACTTAA

Protein sequence

MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQLKGRTIDLFVVNSFGSAFQAVFILALLPFLSKLWGIPFTQLPSYLRDGAACFLNYGSLSGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPISVYMFTLPLPYIGVASALPSGFVAGAVILVLGLLIYAWTPSGSSDTNNATPHVPTT

Homology

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BLAST of Cucsat.G1489 vs. ExPASy Swiss-Prot
Match: Q058P6 (Protein CLT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT1 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.4e-70
Identity = 158/305 (51.80%), Postives = 200/305 (65.57%), Query Frame = 0


Query: 2   TSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRL---EA 61
           T+ S R  AG  +  G    R    +     I RN    +G   ++LR+ +  RL   EA
Sbjct: 3   TTSSDRLIAGLTASIGSIESRYANPAQSVSLICRNQ--INGAPPIVLRSSRRSRLWLIEA 62

Query: 62  VAPSGAWDLSDSGEEDRVK--PCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVE 121
           + P+ +W+ S+ G+ED  K    +YA+G         G  G  +         + DR +E
Sbjct: 63  IPPAKSWNGSNDGDEDIKKSDTRNYAIG---------GTGGHAVAG-------KDDRTME 122

Query: 122 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 181
           IV+AAA+T   GV NRVLYKLAL+PLK YPFFLAQL+TFGYV VYFSILY RY AGIVT 
Sbjct: 123 IVIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTFGYVAVYFSILYFRYRAGIVTK 182

Query: 182 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 241
           EMLS PK P+++ G+LE+L  A GMAAA+ LSG S  VLSQTFLVWQIL S IFLGRRY+
Sbjct: 183 EMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLSQTFLVWQILFSIIFLGRRYR 242

Query: 242 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 301
            +Q+ GC  V  GVI++VASGS A +S K+ GI WSLLM+ SFL Q ADTV+KE+IFLD+
Sbjct: 243 INQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLMVFSFLLQGADTVMKEVIFLDS 289

[Close]

BLAST of Cucsat.G1489 vs. ExPASy Swiss-Prot
Match: Q8RWL5 (Protein CLT3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT3 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.8e-68
Identity = 153/305 (50.16%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPE-VSIYRNDDLRSGCGCVILRAPKHRRLEAV 60
           M + S RF+ G   F     ++    + P+ +S+ R + +      ++   P  RR   +
Sbjct: 1   MATTSRRFTTGL--FASITSVKSHSANRPQSISLIRRNHIDHRLPLIV---PSSRRW-II 60

Query: 61  APSGAWDLSDSGEEDRVK---PCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVE 120
             + +WD  D G E  +K      YA+GD  +    EG S   +  I  E ++ +    E
Sbjct: 61  QAARSWDGFDDGAEAEIKKPGAYGYAIGDNEI----EGSSSSTVHVIDGEHVKTA----E 120

Query: 121 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 180
           IV+ AA T  FGV NRV+YKLALVPLK YPFFLAQL+TFGYV VY++ILY RY AG VTD
Sbjct: 121 IVIWAAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYRAGTVTD 180

Query: 181 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 240
            MLS PK+P+++ G+LEAL AA GMAAAA LSG S  VLSQTFLVWQI  S IFLGRRY 
Sbjct: 181 AMLSVPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIFLGRRYS 240

Query: 241 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 300
            +Q+ GC  V +GVI++VASGS A +SL EAG+ W LLM++SFL Q A TVLKE+IF+D+
Sbjct: 241 VNQILGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKEVIFIDS 291

Query: 301 SRQLK 302
            R+LK
Sbjct: 301 QRRLK 291

[Close]

BLAST of Cucsat.G1489 vs. ExPASy Swiss-Prot
Match: A1L4X0 (Protein CLT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.6e-48
Identity = 97/185 (52.43%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 117 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 176
           IV  +   V   VANRVLYKLALVP+K YPFF+AQL TFGYV++YF+ILY R   GIVT+
Sbjct: 94  IVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGYVLIYFTILYTRRRLGIVTN 153

Query: 177 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 236
           EM+  PK  + + G LEALG ATGMAAAA+L G  IP+L+QT+LVWQ+L + + LGRR+ 
Sbjct: 154 EMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQTYLVWQLLFALLILGRRFL 213

Query: 237 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 296
            +Q+ GC  V +GV++ V+SGS A  +L   G  W  +++ S  FQA  +++KE +F DA
Sbjct: 214 LNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKEFVFNDA 273

Query: 297 SRQLK 302
           +++L+
Sbjct: 274 AKRLE 278

[Close]

BLAST of Cucsat.G1489 vs. ExPASy Swiss-Prot
Match: Q55C66 (Crt homolog 3 OS=Dictyostelium discoideum OX=44689 GN=crtp3 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 59/203 (29.06%), Postives = 100/203 (49.26%), Query Frame = 0


Query: 98  EILENIRAEKLRRSDRK--VEIVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATF 157
           E L N     L++S  K  + I++     +I GV N VL K  ++   +Y FFL+Q+  +
Sbjct: 34  ESLSNKFKSFLKKSMTKETLPILIYVLLYIISGVINVVLLKKLMIKFVNYGFFLSQITNY 93

Query: 158 GYVIVYF-SILYLRYHAGIVTDEMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPV 217
           GY+ ++  ++ Y  Y    V  E  + P+  +++ GLL+A+     +      SG    +
Sbjct: 94  GYLPIFLVAMWYKMYCTSDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQL 153

Query: 218 LSQTFLVWQILLSTIFLGRRYKTSQLFGCFFVTIGVII----TVASGSNAGNSLKEAGIF 277
           L+Q  + + ++ S IFL  RY   QL G   +  GVI+    ++  GS+ GN L     F
Sbjct: 154 LNQAIIPFTMIASFIFLRERYSLFQLGGAAVILGGVIVSLIPSLVGGSSGGNIL-----F 213

Query: 278 WSLLMIISFLFQAADTVLKEIIF 294
           ++   +IS +  A   V K+I F
Sbjct: 214 YNFFYLISVIPGALSNVYKDIAF 231

[Close]

BLAST of Cucsat.G1489 vs. ExPASy Swiss-Prot
Match: Q9GSB0 (Crt homolog 1 OS=Dictyostelium discoideum OX=44689 GN=crtp1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.5e-08
Identity = 55/191 (28.80%), Postives = 88/191 (46.07%), Query Frame = 0


Query: 106 EKLRRSDRK--VEIVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFS 165
           +K++ S  K  + I++     V  GV N VL K  +    +Y FFL+QL  FGYV ++ +
Sbjct: 39  QKIKNSMSKETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGA 98

Query: 166 I-LYLRYHAGIVTDEMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVW 225
           +  Y  +    +  E    P   + + G L+A+     +      SG    +L+Q  + +
Sbjct: 99  VTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPF 158

Query: 226 QILLSTIFLGRRYKTSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQ 285
            ++ S IFL  RY   QL G   V IG ++T    S  G S      FW+   ++S +  
Sbjct: 159 TMIASFIFLKERYSLIQLGGA-LVIIGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPG 218

Query: 286 AADTVLKEIIF 294
           A   V K+I F
Sbjct: 219 ALSNVYKDIGF 228

[Close]

BLAST of Cucsat.G1489 vs. NCBI nr
Match: XP_004140194.1 (protein CLT1, chloroplastic [Cucumis sativus] >KGN48096.1 hypothetical protein Csa_004404 [Cucumis sativus])

HSP 1 Score: 570 bits (1469), Expect = 2.84e-201
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300

[Close]

BLAST of Cucsat.G1489 vs. NCBI nr
Match: XP_008449652.1 (PREDICTED: protein CLT1, chloroplastic [Cucumis melo] >TYJ96108.1 protein CLT1 [Cucumis melo var. makuwa])

HSP 1 Score: 555 bits (1430), Expect = 2.42e-195
Identity = 293/301 (97.34%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFS GTASFGGPFRLR++PRSLPE+SIYRN DLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSGGTASFGGPFRLRKQPRSLPEMSIYRNADLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEG SGEILENIRAEKLRRS+RKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGNSGEILENIRAEKLRRSNRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AA TVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AALTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300

[Close]

BLAST of Cucsat.G1489 vs. NCBI nr
Match: KAA0061766.1 (protein CLT1 [Cucumis melo var. makuwa])

HSP 1 Score: 527 bits (1358), Expect = 2.00e-184
Identity = 282/301 (93.69%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFS GTASFGGPFRLR++PRSLPE+SIYRN DLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSGGTASFGGPFRLRKQPRSLPEMSIYRNADLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEG SGEILENIRAEK RRS+RKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGNSGEILENIRAEKSRRSNRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AA TVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AALTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAA   + +S    SQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAADSSNYSSFC--SQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 299

[Close]

BLAST of Cucsat.G1489 vs. NCBI nr
Match: XP_038901870.1 (protein CLT1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 522 bits (1345), Expect = 1.24e-182
Identity = 282/312 (90.38%), Postives = 293/312 (93.91%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVS---IYRNDDLRSGCGCVILRAPKHRRLE 60
           M+SWS RFSA TASFGGPFRLRQ+PRSL EVS   IYRN  LRSGCGCVILRAPKHRRLE
Sbjct: 1   MSSWSRRFSADTASFGGPFRLRQQPRSLAEVSHLGIYRNGYLRSGCGCVILRAPKHRRLE 60

Query: 61  AVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEI 120
           AVAPSGAWD SDS EEDRVKPCSYAVGDQRVEDLA+  SGEIL+NIRAEKLRRS+R VEI
Sbjct: 61  AVAPSGAWDRSDSREEDRVKPCSYAVGDQRVEDLAKRNSGEILDNIRAEKLRRSNRTVEI 120

Query: 121 VVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDE 180
           VVAAA TVIFGVANRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFSILY+RYHAGIVTDE
Sbjct: 121 VVAAALTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYIRYHAGIVTDE 180

Query: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240
           MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT
Sbjct: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240

Query: 241 SQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300
           SQL GCF VTIGVIITVASGSNAG+SLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS
Sbjct: 241 SQLLGCFLVTIGVIITVASGSNAGHSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300

Query: 301 RQLKVYWAVSLL 309
           RQLK  + ++LL
Sbjct: 301 RQLKAVFVLALL 312

[Close]

BLAST of Cucsat.G1489 vs. NCBI nr
Match: XP_038901869.1 (protein CLT1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 519 bits (1337), Expect = 3.70e-181
Identity = 280/304 (92.11%), Postives = 288/304 (94.74%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVS---IYRNDDLRSGCGCVILRAPKHRRLE 60
           M+SWS RFSA TASFGGPFRLRQ+PRSL EVS   IYRN  LRSGCGCVILRAPKHRRLE
Sbjct: 1   MSSWSRRFSADTASFGGPFRLRQQPRSLAEVSHLGIYRNGYLRSGCGCVILRAPKHRRLE 60

Query: 61  AVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEI 120
           AVAPSGAWD SDS EEDRVKPCSYAVGDQRVEDLA+  SGEIL+NIRAEKLRRS+R VEI
Sbjct: 61  AVAPSGAWDRSDSREEDRVKPCSYAVGDQRVEDLAKRNSGEILDNIRAEKLRRSNRTVEI 120

Query: 121 VVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDE 180
           VVAAA TVIFGVANRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFSILY+RYHAGIVTDE
Sbjct: 121 VVAAALTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYIRYHAGIVTDE 180

Query: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240
           MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT
Sbjct: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240

Query: 241 SQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300
           SQL GCF VTIGVIITVASGSNAG+SLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS
Sbjct: 241 SQLLGCFLVTIGVIITVASGSNAGHSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300

[Close]

BLAST of Cucsat.G1489 vs. ExPASy TrEMBL
Match: A0A0A0KK12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430720 PE=3 SV=1)

HSP 1 Score: 570 bits (1469), Expect = 1.37e-201
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300

[Close]

BLAST of Cucsat.G1489 vs. ExPASy TrEMBL
Match: A0A5D3BD09 (Protein CLT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00710 PE=3 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 1.17e-195
Identity = 293/301 (97.34%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFS GTASFGGPFRLR++PRSLPE+SIYRN DLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSGGTASFGGPFRLRKQPRSLPEMSIYRNADLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEG SGEILENIRAEKLRRS+RKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGNSGEILENIRAEKLRRSNRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AA TVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AALTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300

[Close]

BLAST of Cucsat.G1489 vs. ExPASy TrEMBL
Match: A0A1S3BMI5 (protein CLT1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491470 PE=3 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 1.17e-195
Identity = 293/301 (97.34%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFS GTASFGGPFRLR++PRSLPE+SIYRN DLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSGGTASFGGPFRLRKQPRSLPEMSIYRNADLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEG SGEILENIRAEKLRRS+RKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGNSGEILENIRAEKLRRSNRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AA TVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AALTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300

[Close]

BLAST of Cucsat.G1489 vs. ExPASy TrEMBL
Match: A0A5A7V5J7 (Protein CLT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001450 PE=3 SV=1)

HSP 1 Score: 527 bits (1358), Expect = 9.67e-185
Identity = 282/301 (93.69%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRLEAVA 60
           MTSWSHRFS GTASFGGPFRLR++PRSLPE+SIYRN DLRSGCGCVILRAPKHRRLEAVA
Sbjct: 1   MTSWSHRFSGGTASFGGPFRLRKQPRSLPEMSIYRNADLRSGCGCVILRAPKHRRLEAVA 60

Query: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEIVVA 120
           PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEG SGEILENIRAEK RRS+RKVEIVVA
Sbjct: 61  PSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGNSGEILENIRAEKSRRSNRKVEIVVA 120

Query: 121 AASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180
           AA TVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS
Sbjct: 121 AALTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDEMLS 180

Query: 181 TPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKTSQL 240
           TPKAPYIVAGLLEALGAATGMAAA   + +S    SQTFLVWQILLSTIFLGRRYKTSQL
Sbjct: 181 TPKAPYIVAGLLEALGAATGMAAADSSNYSSFC--SQTFLVWQILLSTIFLGRRYKTSQL 240

Query: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 300
           FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL
Sbjct: 241 FGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDASRQL 299

[Close]

BLAST of Cucsat.G1489 vs. ExPASy TrEMBL
Match: A0A6J1K352 (protein CLT1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490735 PE=3 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 2.02e-171
Identity = 260/304 (85.53%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVS---IYRNDDLRSGCGCVILRAPKHRRLE 60
           MTSW+ RFSAG  SFG  FRLRQ+PRSL EVS   IYR   LRSGCGCV+LRAPKHRRL+
Sbjct: 1   MTSWTRRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRRLQ 60

Query: 61  AVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEI 120
           A  PS AWD S+SGEEDRVKPCSYAVG QRVEDLAEG SGEILE IRAEKLRRS+R VEI
Sbjct: 61  AAEPSAAWDRSESGEEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRTVEI 120

Query: 121 VVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDE 180
           V+AA  TVIFGVANRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFSILY+RYHAGIVTDE
Sbjct: 121 VIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIVTDE 180

Query: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240
           MLS PKAPY+VAGLLEALGAATGMAA AILSGAS P+LSQTFLVWQILLS IFLGRRYKT
Sbjct: 181 MLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRRYKT 240

Query: 241 SQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300
           +QLFGCF V+IGV+ITVASGSNAGNSLK+AGIFWS+LMIISFLFQAADTVLKEIIFL+AS
Sbjct: 241 NQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFLNAS 300

[Close]

BLAST of Cucsat.G1489 vs. TAIR 10
Match: AT5G19380.1 (CRT (chloroquine-resistance transporter)-like transporter 1 )

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-71
Identity = 158/305 (51.80%), Postives = 200/305 (65.57%), Query Frame = 0


Query: 2   TSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRL---EA 61
           T+ S R  AG  +  G    R    +     I RN    +G   ++LR+ +  RL   EA
Sbjct: 3   TTSSDRLIAGLTASIGSIESRYANPAQSVSLICRNQ--INGAPPIVLRSSRRSRLWLIEA 62

Query: 62  VAPSGAWDLSDSGEEDRVK--PCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVE 121
           + P+ +W+ S+ G+ED  K    +YA+G         G  G  +         + DR +E
Sbjct: 63  IPPAKSWNGSNDGDEDIKKSDTRNYAIG---------GTGGHAVAG-------KDDRTME 122

Query: 122 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 181
           IV+AAA+T   GV NRVLYKLAL+PLK YPFFLAQL+TFGYV VYFSILY RY AGIVT 
Sbjct: 123 IVIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTFGYVAVYFSILYFRYRAGIVTK 182

Query: 182 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 241
           EMLS PK P+++ G+LE+L  A GMAAA+ LSG S  VLSQTFLVWQIL S IFLGRRY+
Sbjct: 183 EMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLSQTFLVWQILFSIIFLGRRYR 242

Query: 242 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 301
            +Q+ GC  V  GVI++VASGS A +S K+ GI WSLLM+ SFL Q ADTV+KE+IFLD+
Sbjct: 243 INQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLMVFSFLLQGADTVMKEVIFLDS 289

[Close]

BLAST of Cucsat.G1489 vs. TAIR 10
Match: AT5G12170.2 (CRT (chloroquine-resistance transporter)-like transporter 3 )

HSP 1 Score: 260.0 bits (663), Expect = 2.7e-69
Identity = 153/305 (50.16%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPE-VSIYRNDDLRSGCGCVILRAPKHRRLEAV 60
           M + S RF+ G   F     ++    + P+ +S+ R + +      ++   P  RR   +
Sbjct: 1   MATTSRRFTTGL--FASITSVKSHSANRPQSISLIRRNHIDHRLPLIV---PSSRRW-II 60

Query: 61  APSGAWDLSDSGEEDRVK---PCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVE 120
             + +WD  D G E  +K      YA+GD  +    EG S   +  I  E ++ +    E
Sbjct: 61  QAARSWDGFDDGAEAEIKKPGAYGYAIGDNEI----EGSSSSTVHVIDGEHVKTA----E 120

Query: 121 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 180
           IV+ AA T  FGV NRV+YKLALVPLK YPFFLAQL+TFGYV VY++ILY RY AG VTD
Sbjct: 121 IVIWAAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYRAGTVTD 180

Query: 181 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 240
            MLS PK+P+++ G+LEAL AA GMAAAA LSG S  VLSQTFLVWQI  S IFLGRRY 
Sbjct: 181 AMLSVPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIFLGRRYS 240

Query: 241 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 300
            +Q+ GC  V +GVI++VASGS A +SL EAG+ W LLM++SFL Q A TVLKE+IF+D+
Sbjct: 241 VNQILGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKEVIFIDS 291

Query: 301 SRQLK 302
            R+LK
Sbjct: 301 QRRLK 291

[Close]

BLAST of Cucsat.G1489 vs. TAIR 10
Match: AT5G19380.2 (CRT (chloroquine-resistance transporter)-like transporter 1 )

HSP 1 Score: 240.0 bits (611), Expect = 2.9e-63
Identity = 158/365 (43.29%), Postives = 200/365 (54.79%), Query Frame = 0


Query: 2   TSWSHRFSAGTASFGGPFRLRQRPRSLPEVSIYRNDDLRSGCGCVILRAPKHRRL---EA 61
           T+ S R  AG  +  G    R    +     I RN    +G   ++LR+ +  RL   EA
Sbjct: 3   TTSSDRLIAGLTASIGSIESRYANPAQSVSLICRNQ--INGAPPIVLRSSRRSRLWLIEA 62

Query: 62  VAPSGAWDLSDSGEEDRVK--PCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVE 121
           + P+ +W+ S+ G+ED  K    +YA+G         G  G  +         + DR +E
Sbjct: 63  IPPAKSWNGSNDGDEDIKKSDTRNYAIG---------GTGGHAVAG-------KDDRTME 122

Query: 122 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFG-------------------- 181
           IV+AAA+T   GV NRVLYKLAL+PLK YPFFLAQL+TFG                    
Sbjct: 123 IVIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTFGFRFRFVVSFDDLAFIVFNCW 182

Query: 182 ----------------------------------------YVIVYFSILYLRYHAGIVTD 241
                                                   YV VYFSILY RY AGIVT 
Sbjct: 183 TIFKMSTTTENRKFYSPVYTLAVTVYEIDALDITLGLEEMYVAVYFSILYFRYRAGIVTK 242

Query: 242 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 301
           EMLS PK P+++ G+LE+L  A GMAAA+ LSG S  VLSQTFLVWQIL S IFLGRRY+
Sbjct: 243 EMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLSQTFLVWQILFSIIFLGRRYR 302

[Close]

BLAST of Cucsat.G1489 vs. TAIR 10
Match: AT4G24460.1 (CRT (chloroquine-resistance transporter)-like transporter 2 )

HSP 1 Score: 192.2 bits (487), Expect = 6.8e-49
Identity = 97/185 (52.43%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 117 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 176
           IV  +   V   VANRVLYKLALVP+K YPFF+AQL TFGYV++YF+ILY R   GIVT+
Sbjct: 94  IVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGYVLIYFTILYTRRRLGIVTN 153

Query: 177 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 236
           EM+  PK  + + G LEALG ATGMAAAA+L G  IP+L+QT+LVWQ+L + + LGRR+ 
Sbjct: 154 EMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQTYLVWQLLFALLILGRRFL 213

Query: 237 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 296
            +Q+ GC  V +GV++ V+SGS A  +L   G  W  +++ S  FQA  +++KE +F DA
Sbjct: 214 LNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKEFVFNDA 273

Query: 297 SRQLK 302
           +++L+
Sbjct: 274 AKRLE 278

[Close]

BLAST of Cucsat.G1489 vs. TAIR 10
Match: AT4G24460.2 (CRT (chloroquine-resistance transporter)-like transporter 2 )

HSP 1 Score: 192.2 bits (487), Expect = 6.8e-49
Identity = 97/185 (52.43%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 117 IVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTD 176
           IV  +   V   VANRVLYKLALVP+K YPFF+AQL TFGYV++YF+ILY R   GIVT+
Sbjct: 94  IVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGYVLIYFTILYTRRRLGIVTN 153

Query: 177 EMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYK 236
           EM+  PK  + + G LEALG ATGMAAAA+L G  IP+L+QT+LVWQ+L + + LGRR+ 
Sbjct: 154 EMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQTYLVWQLLFALLILGRRFL 213

Query: 237 TSQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDA 296
            +Q+ GC  V +GV++ V+SGS A  +L   G  W  +++ S  FQA  +++KE +F DA
Sbjct: 214 LNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKEFVFNDA 273

Query: 297 SRQLK 302
           +++L+
Sbjct: 274 AKRLE 278

The following BLAST results are available for this feature:

BLAST of Cucsat.G1489 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q058P6	2.4e-70	51.80	Protein CLT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT1 PE=2 SV=1	[more]
Q8RWL5	3.8e-68	50.16	Protein CLT3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT3 PE=2 SV=1	[more]
A1L4X0	9.6e-48	52.43	Protein CLT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT2 PE=2 SV=1	[more]
Q55C66	1.4e-09	29.06	Crt homolog 3 OS=Dictyostelium discoideum OX=44689 GN=crtp3 PE=3 SV=1	[more]
Q9GSB0	7.5e-08	28.80	Crt homolog 1 OS=Dictyostelium discoideum OX=44689 GN=crtp1 PE=2 SV=1	[more]

BLAST of Cucsat.G1489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140194.1	2.84e-201	100.00	protein CLT1, chloroplastic [Cucumis sativus] >KGN48096.1 hypothetical protein C...	[more]
XP_008449652.1	2.42e-195	97.34	PREDICTED: protein CLT1, chloroplastic [Cucumis melo] >TYJ96108.1 protein CLT1 [...	[more]
KAA0061766.1	2.00e-184	93.69	protein CLT1 [Cucumis melo var. makuwa]	[more]
XP_038901870.1	1.24e-182	90.38	protein CLT1, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_038901869.1	3.70e-181	92.11	protein CLT1, chloroplastic isoform X1 [Benincasa hispida]	[more]

BLAST of Cucsat.G1489 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK12	1.37e-201	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430720 PE=3 SV=1	[more]
A0A5D3BD09	1.17e-195	97.34	Protein CLT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00710 P...	[more]
A0A1S3BMI5	1.17e-195	97.34	protein CLT1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491470 PE=3 SV=1	[more]
A0A5A7V5J7	9.67e-185	93.69	Protein CLT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001450 ...	[more]
A0A6J1K352	2.02e-171	85.53	protein CLT1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114907...	[more]

BLAST of Cucsat.G1489 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19380.1	1.7e-71	51.80	CRT (chloroquine-resistance transporter)-like transporter 1	[more]
AT5G12170.2	2.7e-69	50.16	CRT (chloroquine-resistance transporter)-like transporter 3	[more]
AT5G19380.2	2.9e-63	43.29	CRT (chloroquine-resistance transporter)-like transporter 1	[more]
AT4G24460.1	6.8e-49	52.43	CRT (chloroquine-resistance transporter)-like transporter 2	[more]
AT4G24460.2	6.8e-49	52.43	CRT (chloroquine-resistance transporter)-like transporter 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013936	Chloroquine-resistance transporter-like	PFAM	PF08627	CRT-like	coord: 118..356 e-value: 1.7E-35 score: 122.6
IPR013936	Chloroquine-resistance transporter-like	PANTHER	PTHR31326	PROTEIN CLT2, CHLOROPLASTIC	coord: 55..359
None	No IPR available	PANTHER	PTHR31326:SF3	PROTEIN CLT1, CHLOROPLASTIC	coord: 55..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1489.T1	Cucsat.G1489.T1	mRNA
Cucsat.G1489.T3	Cucsat.G1489.T3	mRNA
Cucsat.G1489.T2	Cucsat.G1489.T2	mRNA
Cucsat.G1489.T7	Cucsat.G1489.T7	mRNA
Cucsat.G1489.T6	Cucsat.G1489.T6	mRNA
Cucsat.G1489.T5	Cucsat.G1489.T5	mRNA
Cucsat.G1489.T9	Cucsat.G1489.T9	mRNA
Cucsat.G1489.T8	Cucsat.G1489.T8	mRNA
Cucsat.G1489.T10	Cucsat.G1489.T10	mRNA
Cucsat.G1489.T12	Cucsat.G1489.T12	mRNA
Cucsat.G1489.T4	Cucsat.G1489.T4	mRNA
Cucsat.G1489.T11	Cucsat.G1489.T11	mRNA
Cucsat.G1489.T13	Cucsat.G1489.T13	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane