Cucsat.G1488 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1488
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	rhodanese-like/PpiC domain-containing protein 12, chloroplastic
Location	ctg1000: 200723 .. 203184 (-)
RNA-Seq Expression	Cucsat.G1488
Synteny	Cucsat.G1488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTGGATAGACATATTCACTACACGGCGAAGATTCACTCGCGAGTGAGGAGCTGCCAAACAGGAGCGAAATTGCATCCGCGGGCGCCGGCTACGGCGGCGATAAGCATTTTTTTTAAACTGAGACTCGCCGGAAATTAGAAGCGTCAGTGTAGTTAAGTGAAACATTCAATGATGAGGTGCAGTCGTTTGCCTCCATTAGCATCTCCGGTTTTCAACGCCTTCAGGCAGTGTTGGATTCCCGCTATTTCCATTTCTCATAACTTGAATCTTCATTCTGCATCAATTTATGCTTCATTTTCGTCGTATGTTAGCAAAAGCTTCAAACACGTTAAACCTCTCTGGATTCGTCCGATGTCTCTTCATCGTCCAAGCTTTAAAGTAACAGGTCAGTTCCGCTGTTTCTTCAGAGATTCTATCTATCCTTTGTTGATTTTAAGGTTTGTAGAAATGCGCCTGGAATTTTAGTTTGTTCCATCTTTGACTAGTAGGAGAGATGTGTGTGGAACAGTTTTATTTGTTTCACACTTGGTTAGAAGTGTTCGTTGTGTTAGCTCATTTCCAGAATTGCAAACATATATTAGTTTTTTGCGTTGACCTAAGGAGTAATTGATGAACGGATGAAGTAAAAAATATTGCATAGTGCTACTGAATTTAGTAGATGAGATATCGGAGAACAATATCAAGAAGATTAATAATATCTCTGCACTATCAGAAGAAGTACAATGAAGAGCTTCGTTAACATAAGATAAAACTATTTTTTACATTCAAGTTGTCGTCTTTAAAAAATATTGACTTCTGTGAGACCTGATGGGTTTGGAATTAGTTCACATTCATGGTCCGTGTGGAAATTCAAGCAACCTTCGATGAACAGTCTTTTTCCACAAAGAAAAAGAGGCAAAACTTCTTCTCACAGATTGAGTGGAGAACGGCTGGAAAAATTTATGACCACAACTAATTTTGTATTGGAAGTTTCTGAAGAAGTGCAGAGAAAATAAATTGATTATTAAATCGAACACTTATTTTGTTGATGCCATCCCGTCACAAGATTCCGACTATTAATGGGTTTGAGGAAATGGGAAGGAATTGTTTGGACTATAGACTTGTTATGATACTCTTCATCTTAGAAGCCTTAAATTTACATTAATTTGTCCTGCAATTTATGTAATGGAACGAAAGTGTTGTGGTAAAGGGAAATTTCCAAGAATTTGAGTATTTACTGGCAACGGAAAATGGACACTATTTGACTAGGAATATAATATAGTGGTAGGTTGATGAGGACATATTTCTTTAGGCAAAAATTTGTAGTTATTTTTATTATTGCTGACATTTTTTGTACCTGATTCTATTTCCGAAGTAAAATTGGTTGCTTATGAACTCCGTTTTCATTTAGAAGGAAGTGGCCAAGAAAGAAAGAAATTTAATTATTAGATTGTAAATGGAAACACAACAATAGTTTTATATTCATATTTTGATCACAATGGTGCCATCTAGCAGTTTAAGGTTCCAGTAAAATCGCATTTCTCTGTTATTTTTATTATGATTAAGCAAATTCAACTAAAGATATTATTATGTTTCAATAGTCAACTAGATTTCGTTGAACAAAAGGAATGACAAGAAATAATATGATTTGATTATTAACAAGGTTGACTACCAATTAAGTCAGTGTAAGATGGTCAAATTTATCTACTATTGTTGTGATTCTTTTAGCAGATATGTGTATGCTAGATGACTGTTTGTAGTATAATAGCACGTACGCTAAGAAGATCTCAGCTTGACTATACCTGCCATGCCCTCGCATAATAGTATCCATCCTTCAATTCATTTGTCTCAGTATTGTTGGATGTTTTTTGTTTATGAAAATTGAAGTCATCTCCTATAACATATTCCAAATATACGAGGAAAGTGAGTTAAATAACTAAAGTCAAGTGCTTAATTATTCGCTCGGAGAAATAGATGCAATGTAGATCGTATGATTTATTTTGGTGTTCATTTGCTTTATACTCGTCATTTTCAGCTTCTTTTAGTTCCGCTGGAGGCAGTGAAGATGGTAGGGAATTATTGGTCCAGCACTTGCTTGTTAAAGAAGATGACATTAAGCTCTTATCGGAACTTCAGCAAAGAATTGCCGGCGGTTAGTACTACCCTATATAAACATTATATAAATCCCTTCATCTTATCCCCTCCTAATAAGAGTACTGTCAAGAGGACACTCGAGAGTCTATATTACAAATATTACATCGTATGGACATAGTTTTTGATCTTTTACATAAAATTTTTGTTCAGACTAAACAATGTCTCTGTCCTTTTTTCCTTTGCTGCATTCAGGTGAAGATCTAAGCGATCTTGCCGTGGAGTACTCACTCTGTCCATCCAAAGAAGAAGGGGGAATGCTTGGATGGGTGAGGAAGGGGCAAATGGTACGGATTATGATGTCAAGTGATGATTTAATTTTCTGCCACATTCTTATATATTAAAGAACTTAAAACAATGATTATTTTTCAAACGATGTGTGGTTATGATCAATTCTTCCGATTTCATAGCTATGGTGAAAGAACACTCCAACGTAAGATTGTAGTTGGTATTTCCTATCCCTTGTGTTATAGAGATGGTTAAGCTTTTTACATTTTTTTGCTTTTTTTTCTTATGGGATTCTTCATCCATTTTTTTTCGTGTCTGAATTGCAACATATGCTGCTGCTCATTCTTTATTGTTTTTGCTTTATCGTTTTTCTTTATCCACAGCTTGATAGATCTTTTGTGATGACGTCTGTCCAGGTACCAGAGTTTGAGGAGGCTGCCTTTAATGCACCCTTAAACAAAGTAGTAAAATGTAAGACAAAGTTTGGATGGCATTTATTGCAAGTTCTATCTGAGAGGTATGCCATCAAGACAAATTTCTTCTTGAATTTCTTGAAAACCTAGACCGCGAGATTGCGTCATTGTATAATATTTCGCACATTTGCAAATCTTTCTCTTAGAGAGGGATCAGTACTTCTGGACATTCAACCCGAGGAGCTTCATTTGAAAATGCAAGATTCAAATTTCCTGAATGATGCACAGTTGATTGATGTCCGAGAGCCTGAAGAAGTGTATGTACTTATTCCTCTACATTTTTTATATCCGCTTTTCCTTGGGTTCATGTATTTTTTTAGGATCCCCTTTTGGCTTCCAACAAAAATGGAAAAGCGGCTCATCTAAATTCAAACATTTGATCTGACCTTAGTTGAAACAAATAGACTTCGATTACTTTATACCATAAAAATTATACTTGTCAAGAAACTATGGACTTACCAATAGGTTCGGGAGTGTTAGTCCGAAACCATGAACTTGGCCATTATTGAGAGTTGTGTGTGTGTAATCTTATTTTGTGTACATCATTATATCAATAAAAAATTCTCTTTCCGTTCTAAAAAAATACCTAAAAATCTTTACACACACAAAAAAATAAGACTATAGAAACTAAAATACTTAATTGCATCGAAGAAATAAAGCATTCAGACTGAGGCATTTGAATGAACCAAAAATGCATATACAACTTATTTGTGTAGTGCCATCTTGATCTTGCTAATTATGTCTGATATTTCTAAATTGTACGGGAAAATTTATTTTCCTCTCATAGATTGTCTCGTAAAAGGAAAAGAAATAAGAAGAAAAAGAGACATTAATTCCATATTATATGAAACTATCCTGAACTCTTTTTCTTTACAGGGACCAGGCTTCTTTGCCAGCTTTTCAGGTACTACCTCTTCGCCAATTTGGAAGCTGGGGTCCAGAAGTAGCTACGAAGTTCGATCCTGAAAAGGATACTTACGTGTTGGTATATGATATATTTATTTTCTTTTAGAAAAGTTGTCTTTTTTTTTTTTTTGTTTGAAAATAAATAATTGGCCCTGCATTACCTCAAAAAGATATCAGGAAAGCCCTCTTTGATGGTTTCATAGCTATAAAAAAGAATGAGTAAGAAAGAGATTTTCCACTATGTTCTAATTGGTTTCTGACTTTCATGTTACGAGGGACAGATAAGCAAGTGGACACGATTTCCTGGATTCCTTTTAAGTTGATGTTTGCATGTCTTGGTATAATTATGAACCATGTAAAATATTGGATGTGTTTTTAGGGTGAAATAGGTCAACACACCATCATTCTATCTTAGATATATTTGAAACTTGTAAATTTTTTTACTAAGTTTAATCTGATTGAGTTTCACTACGAGTTCAGGTTATAATCTATAAATTTATATCATTCAAAATCTTAGAATTAATACAGATAATTTTTTTTTTTTAAACCATCATGGGTAGGCCTAATAGTAAATATGGGGCATGACCTTCATTCATATAGGGCTAAGAGGTCATACGAGGATTACCTCCCACCCCTTTTTTGGCCTACTATTTTGAAGATCTATCGTTTCTGTATGAGTGAGATTTTTGAAACTTTGTTTGCCAATGAGTGCAGTGTCACCATGGAATGAGGTCGATGCAAGTAGCAAGATACTTACAAACGCAGGTAATATCAAAATTTCCCCTCAATGCATTGTAGAAGTTGACAAATGTCATTTATATACTTCATTGGTTGTAATTCTTTTTTGTCTCTCCTTCAAGCCTTGGAACAAATCACATTTCTCATAGAACCATTGAGATGTAATAAAGACTCGGAGGGAATGAATCAAAACTATAGTAGTCACCTACTTGGTATTTAATATCCTACGAGTCTCCTCGACACTATAGTAGAGTTAGACAAGTTGTTCAATGAGTTTAGTTGAAGTGCACCCAAGCTTCACTGTCAAAAAAATTAAAAAACAACTAAGTTTATCAGCTTCCTATTGCATCTCATAGTCTATGATCACAAGATATCGATAAAAATTAGGTATATGCTAGACATTAGCTATTTAGATTGTTACAACGATATTTGGTTATAAATAGCAAAGAAGAGGAAGGGACTTTAGAGCTAATTCCGCAAATTACTTAGGTTTATCTCAGTTTTTACCTTTTTATTTACATATATGTATATACACATAATACATATACATATATATGTAGATACACATACATACACATATTGAAAGGTATAGTAACTTTATTTAGTATTACTTCTAATATTCAGGGTTTCAAGAAAGTCTACAATGTGTGTGGAGGAATTCATGCATACTCTCTCAAAGTTGATCCATCCATTCCCACCTACTGAGATACTGCCCCTTTTCCTTCTCTCCAATTTATTTTTCAGTTTAATAATTGTATGATCTAAAATTTGAATATTCCATTTTGAAACTGTAATATGTCTAAAATATGTGTATTAACCTCTTTTTTGTCTCTATCATGTTAAATTCATTTGCAACTTTGTATTTCTGGGTCATTTCTTGATTTGCTTTGTTTTATATTGTATTTGAGTAATTGTTCTTAATATCGTATGCCTTACAACCTTGTTCTTAATATCTTATTATGC

Coding sequence (CDS)

ATGATGAGGTGCAGTCGTTTGCCTCCATTAGCATCTCCGGTTTTCAACGCCTTCAGGCAGTGTTGGATTCCCGCTATTTCCATTTCTCATAACTTGAATCTTCATTCTGCATCAATTTATGCTTCATTTTCGTCGTATGTTAGCAAAAGCTTCAAACACGTTAAACCTCTCTGGATTCGTCCGATGTCTCTTCATCGTCCAAGCTTTAAAGTAACAGCTTCTTTTAGTTCCGCTGGAGGCAGTGAAGATGGTAGGGAATTATTGGTCCAGCACTTGCTTGTTAAAGAAGATGACATTAAGCTCTTATCGGAACTTCAGCAAAGAATTGCCGGCGGTGAAGATCTAAGCGATCTTGCCGTGGAGTACTCACTCTGTCCATCCAAAGAAGAAGGGGGAATGCTTGGATGGGTGAGGAAGGGGCAAATGGTACCAGAGTTTGAGGAGGCTGCCTTTAATGCACCCTTAAACAAAGTAGTAAAATGTAAGACAAAGTTTGGATGGCATTTATTGCAAGTTCTATCTGAGAGAGAGGGATCAGTACTTCTGGACATTCAACCCGAGGAGCTTCATTTGAAAATGCAAGATTCAAATTTCCTGAATGATGCACAGTTGATTGATGTCCGAGAGCCTGAAGAAGTGGACCAGGCTTCTTTGCCAGCTTTTCAGGTACTACCTCTTCGCCAATTTGGAAGCTGGGGTCCAGAAGTAGCTACGAAGTTCGATCCTGAAAAGGATACTTACGTGTTGTGTCACCATGGAATGAGGTCGATGCAAGTAGCAAGATACTTACAAACGCAGGGTTTCAAGAAAGTCTACAATGTGTGTGGAGGAATTCATGCATACTCTCTCAAAGTTGATCCATCCATTCCCACCTACTGA

Protein sequence

MMRCSRLPPLASPVFNAFRQCWIPAISISHNLNLHSASIYASFSSYVSKSFKHVKPLWIRPMSLHRPSFKVTASFSSAGGSEDGRELLVQHLLVKEDDIKLLSELQQRIAGGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFNAPLNKVVKCKTKFGWHLLQVLSEREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSWGPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY

Homology

[Close]

BLAST of Cucsat.G1488 vs. ExPASy Swiss-Prot
Match: Q93WI0 (Rhodanese-like/PpiC domain-containing protein 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g19370 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-41
Identity = 79/118 (66.95%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 14  LREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSWGP 73
           L E   + DIQ EELH KMQD  F+++AQLIDVREP E++ ASLP F+V PLRQFG+W P
Sbjct: 182 LSEREPVKDIQVEELHSKMQDPVFMDEAQLIDVREPNEIEIASLPGFKVFPLRQFGTWAP 241

Query: 74  EVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 132
           ++ +K +PEKDT+VLC  G RSMQVA +LQ+QGFK VYN+ GGI AYSLKVDPSIPTY
Sbjct: 242 DITSKLNPEKDTFVLCKVGGRSMQVANWLQSQGFKSVYNITGGIQAYSLKVDPSIPTY 299

[Close]

BLAST of Cucsat.G1488 vs. ExPASy Swiss-Prot
Match: P54433 (Putative sulfur carrier protein YrkF OS=Bacillus subtilis (strain 168) OX=224308 GN=yrkF PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-09
Identity = 36/113 (31.86%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 13  SLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSWG 72
           S    S + +I  E    K+     LN   ++DVRE EE ++A +P    +PL +     
Sbjct: 80  SSENASSIPEISLEAFKQKVDSDESLN---ILDVREIEEYEKAHIPGVVHIPLGEV---- 139

Query: 73  PEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVD 126
            + A + +   + Y++CH G RS   AR ++ QGFKKV NV  G+  ++ K +
Sbjct: 140 EKRANELNENDEIYIICHSGRRSEMAARTMKKQGFKKVINVVPGMRDWTGKTE 185

[Close]

BLAST of Cucsat.G1488 vs. ExPASy Swiss-Prot
Match: O32072 (Putative sulfurtransferase YtwF OS=Bacillus subtilis (strain 168) OX=224308 GN=ytwF PE=4 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08
Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 43  LIDVREPEEVDQASLPAFQVLPLRQFGSWGPEVATKFDPEKDTYVLCHHGMRSMQVARYL 102
           LIDVRE EEV +  +P  Q + +R      PE     D +K+   +C  GMRSM V +YL
Sbjct: 23  LIDVREDEEVAEGMIP--QAVHIRMGDI--PEKMETLDKDKEYVFICRSGMRSMNVCKYL 82

Query: 103 QTQGFKKVYNVCGGIHAYSLKVDP 127
             QGFK V NV GG+ A+  +  P
Sbjct: 83  DEQGFKTV-NVEGGMMAWEGETKP 101

[Close]

BLAST of Cucsat.G1488 vs. ExPASy Swiss-Prot
Match: D3RPB9 (Sulfurtransferase Alvin_2599 OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=rhd_2599 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 22  DIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSWGPEVATKFDP 81
           +I  E L  ++ D+    D  L+D+R P E+ Q  +P    LP+       P   ++   
Sbjct: 4   EIDSESLSQRLADT---EDVLLVDIRTPAEIAQGMIPDALQLPMHLI----PIRMSEIPK 63

Query: 82  EKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYS 122
           ++D  + C  G RS Q   YL  QG+ +V N+ GGI A++
Sbjct: 64  DRDVVIYCRSGARSYQACAYLMQQGYGRVLNLRGGIIAWA 96

[Close]

BLAST of Cucsat.G1488 vs. ExPASy Swiss-Prot
Match: Q9Z7H1 (tRNA uridine(34) hydroxylase OS=Chlamydia pneumoniae OX=83558 GN=trhO PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-07
Identity = 36/108 (33.33%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 23  IQPEELHLKMQDSNFLNDAQLIDVREPEE-----VDQASLPAFQVLPLRQFGSWGPEVAT 82
           I P+E H K+Q++  L    ++DVR   E      D A+LP  Q    R+F  +  ++A 
Sbjct: 112 ISPQEWHEKLQENRCL----ILDVRNNYEWKIGHFDNATLPDIQT--FREFPEYAEKLAQ 171

Query: 83  KFDPEKDTYVL-CHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKV 125
           + DPE    ++ C  G+R    +  L  +GFK+VY + GG+ AY  +V
Sbjct: 172 ECDPETTPVMMYCTGGIRCELYSPVLLEKGFKEVYQLDGGVIAYGQQV 213

[Close]

BLAST of Cucsat.G1488 vs. NCBI nr
Match: XP_008449650.1 (PREDICTED: rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 232 bits (592), Expect = 1.20e-74
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 134 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 193

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 194 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 253

[Close]

BLAST of Cucsat.G1488 vs. NCBI nr
Match: KAA0061764.1 (rhodanese-like/PpiC domain-containing protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (592), Expect = 3.98e-74
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 172 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 231

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 232 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 291

[Close]

BLAST of Cucsat.G1488 vs. NCBI nr
Match: XP_008449649.1 (PREDICTED: rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X1 [Cucumis melo] >TYJ96106.1 rhodanese-like/PpiC domain-containing protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (592), Expect = 4.11e-74
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 173 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 232

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 233 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 292

[Close]

BLAST of Cucsat.G1488 vs. NCBI nr
Match: XP_038902730.1 (rhodanese-like/PpiC domain-containing protein 12, chloroplastic [Benincasa hispida])

HSP 1 Score: 224 bits (572), Expect = 4.42e-71
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS RE SVLL+IQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 173 LSEREQSVLLEIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 232

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDP+KDTYV+CHHG+RS+QVARYLQTQGFK VYNV GGIHAYSLKVDPSIPTY
Sbjct: 233 GPEVTTKFDPQKDTYVMCHHGVRSLQVARYLQTQGFKNVYNVSGGIHAYSLKVDPSIPTY 292

[Close]

BLAST of Cucsat.G1488 vs. NCBI nr
Match: XP_023533537.1 (rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219 bits (557), Expect = 2.06e-69
Identity = 106/120 (88.33%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS R  SVLLDIQPEELHLKMQD NFLN+AQLIDVREPEEVDQA LPAFQVLPLRQFGSW
Sbjct: 128 LSERGESVLLDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQACLPAFQVLPLRQFGSW 187

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDP+KDTYV+CHHG+RS+QVARYLQTQGFKKVYNV GGIHAYSL+VD SIPTY
Sbjct: 188 GPEVTTKFDPQKDTYVMCHHGVRSLQVARYLQTQGFKKVYNVSGGIHAYSLQVDSSIPTY 247

[Close]

BLAST of Cucsat.G1488 vs. ExPASy TrEMBL
Match: A0A1S3BNF6 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103491468 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 5.83e-75
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 134 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 193

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 194 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 253

[Close]

BLAST of Cucsat.G1488 vs. ExPASy TrEMBL
Match: A0A5A7V3B7 (Rhodanese-like/PpiC domain-containing protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001430 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.93e-74
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 172 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 231

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 232 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 291

[Close]

BLAST of Cucsat.G1488 vs. ExPASy TrEMBL
Match: A0A5D3BB41 (Rhodanese-like/PpiC domain-containing protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00690 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.99e-74
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 173 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 232

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 233 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 292

[Close]

BLAST of Cucsat.G1488 vs. ExPASy TrEMBL
Match: A0A1S3BN56 (rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491468 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.99e-74
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS REGSVL DIQPEELHLKMQD NFLN+AQLIDVREPEEVDQASLPAFQVLPLRQFGSW
Sbjct: 173 LSEREGSVLRDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 232

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDPEKDTYV+CHHG+RSMQVA+YLQ+QGFKKVYNVCGGIHAYSLKVDPSIPTY
Sbjct: 233 GPEVTTKFDPEKDTYVMCHHGVRSMQVAKYLQSQGFKKVYNVCGGIHAYSLKVDPSIPTY 292

[Close]

BLAST of Cucsat.G1488 vs. ExPASy TrEMBL
Match: A0A6J1K4T2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111490758 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 9.98e-70
Identity = 106/120 (88.33%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 12  LSLREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSW 71
           LS R  SVLLDIQPEELHLKMQD NFLN+AQLIDVREPEEVDQA LPAFQVLPLRQFGSW
Sbjct: 128 LSERGESVLLDIQPEELHLKMQDPNFLNEAQLIDVREPEEVDQACLPAFQVLPLRQFGSW 187

Query: 72  GPEVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 131
           GPEV TKFDP+K+TYV+CHHG+RS+QVARYLQTQGFKKVYNV GGIHAYSLKVD SIPTY
Sbjct: 188 GPEVTTKFDPQKETYVMCHHGVRSLQVARYLQTQGFKKVYNVSGGIHAYSLKVDSSIPTY 247

[Close]

BLAST of Cucsat.G1488 vs. TAIR 10
Match: AT5G19370.1 (rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42
Identity = 79/118 (66.95%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 14  LREGSVLLDIQPEELHLKMQDSNFLNDAQLIDVREPEEVDQASLPAFQVLPLRQFGSWGP 73
           L E   + DIQ EELH KMQD  F+++AQLIDVREP E++ ASLP F+V PLRQFG+W P
Sbjct: 182 LSEREPVKDIQVEELHSKMQDPVFMDEAQLIDVREPNEIEIASLPGFKVFPLRQFGTWAP 241

Query: 74  EVATKFDPEKDTYVLCHHGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 132
           ++ +K +PEKDT+VLC  G RSMQVA +LQ+QGFK VYN+ GGI AYSLKVDPSIPTY
Sbjct: 242 DITSKLNPEKDTFVLCKVGGRSMQVANWLQSQGFKSVYNITGGIQAYSLKVDPSIPTY 299

[Close]

BLAST of Cucsat.G1488 vs. TAIR 10
Match: AT5G55130.1 (co-factor for nitrate, reductase and xanthine dehydrogenase 5 )

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-06
Identity = 27/101 (26.73%), Postives = 44/101 (43.56%), Query Frame = 0


Query: 43  LIDVREPEEVDQASLPAFQVLPLRQFGSWGPEVA------------TKFDPEKDTYVLCH 102
           L+DVR        SLP    +PL    +   E+             T+       +V+C 
Sbjct: 364 LLDVRPSHHYKIVSLPDSLNIPLANLETRLNELTSALKEKGNGHANTESCTNPSVFVVCR 423

Query: 103 HGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 132
            G  S +  +YL+  GF    ++ GG+ A++  V+P+ PTY
Sbjct: 424 RGNDSQRAVQYLRESGFDSAKDIIGGLEAWAANVNPNFPTY 464

[Close]

BLAST of Cucsat.G1488 vs. TAIR 10
Match: AT5G55130.2 (co-factor for nitrate, reductase and xanthine dehydrogenase 5 )

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-06
Identity = 27/101 (26.73%), Postives = 44/101 (43.56%), Query Frame = 0


Query: 43  LIDVREPEEVDQASLPAFQVLPLRQFGSWGPEVA------------TKFDPEKDTYVLCH 102
           L+DVR        SLP    +PL    +   E+             T+       +V+C 
Sbjct: 337 LLDVRPSHHYKIVSLPDSLNIPLANLETRLNELTSALKEKGNGHANTESCTNPSVFVVCR 396

Query: 103 HGMRSMQVARYLQTQGFKKVYNVCGGIHAYSLKVDPSIPTY 132
            G  S +  +YL+  GF    ++ GG+ A++  V+P+ PTY
Sbjct: 397 RGNDSQRAVQYLRESGFDSAKDIIGGLEAWAANVNPNFPTY 437

The following BLAST results are available for this feature:

BLAST of Cucsat.G1488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WI0	2.0e-41	66.95	Rhodanese-like/PpiC domain-containing protein 12, chloroplastic OS=Arabidopsis t...	[more]
P54433	4.4e-09	31.86	Putative sulfur carrier protein YrkF OS=Bacillus subtilis (strain 168) OX=224308...	[more]
O32072	2.2e-08	42.86	Putative sulfurtransferase YtwF OS=Bacillus subtilis (strain 168) OX=224308 GN=y...	[more]
D3RPB9	1.9e-07	31.00	Sulfurtransferase Alvin_2599 OS=Allochromatium vinosum (strain ATCC 17899 / DSM ...	[more]
Q9Z7H1	7.1e-07	33.33	tRNA uridine(34) hydroxylase OS=Chlamydia pneumoniae OX=83558 GN=trhO PE=3 SV=1	[more]

BLAST of Cucsat.G1488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449650.1	1.20e-74	92.50	PREDICTED: rhodanese-like/PpiC domain-containing protein 12, chloroplastic isofo...	[more]
KAA0061764.1	3.98e-74	92.50	rhodanese-like/PpiC domain-containing protein 12 [Cucumis melo var. makuwa]	[more]
XP_008449649.1	4.11e-74	92.50	PREDICTED: rhodanese-like/PpiC domain-containing protein 12, chloroplastic isofo...	[more]
XP_038902730.1	4.42e-71	90.00	rhodanese-like/PpiC domain-containing protein 12, chloroplastic [Benincasa hispi...	[more]
XP_023533537.1	2.06e-69	88.33	rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X2 [Cucu...	[more]

BLAST of Cucsat.G1488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNF6	5.83e-75	92.50	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103491468 PE=4...	[more]
A0A5A7V3B7	1.93e-74	92.50	Rhodanese-like/PpiC domain-containing protein 12 OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3BB41	1.99e-74	92.50	Rhodanese-like/PpiC domain-containing protein 12 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BN56	1.99e-74	92.50	rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X1 OS=Cu...	[more]
A0A6J1K4T2	9.98e-70	88.33	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111490758 ...	[more]

BLAST of Cucsat.G1488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19370.1	1.4e-42	66.95	rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing pr...	[more]
AT5G55130.1	4.7e-06	26.73	co-factor for nitrate, reductase and xanthine dehydrogenase 5	[more]
AT5G55130.2	4.7e-06	26.73	co-factor for nitrate, reductase and xanthine dehydrogenase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.50.40		coord: 82..177 e-value: 5.9E-23 score: 83.1
None	No IPR available	PFAM	PF13616	Rotamase_3	coord: 99..174 e-value: 4.0E-17 score: 62.8
None	No IPR available	PANTHER	PTHR43629	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..249
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 86..173
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 178..251 e-value: 2.1E-7 score: 32.5
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 183..249
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 198..249 score: 8.966705
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PROSITE	PS50198	PPIC_PPIASE_2	coord: 84..174 score: 20.715042

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1488.T1	Cucsat.G1488.T1	mRNA
Cucsat.G1488.T4	Cucsat.G1488.T4	mRNA
Cucsat.G1488.T3	Cucsat.G1488.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity