Cucsat.G14661 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14661
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontranscription factor TCP5
Locationctg1869: 3037887 .. 3045068 (+)
RNA-Seq ExpressionCucsat.G14661
SyntenyCucsat.G14661
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAACAATCTTCTCTATCAATTCTTCCTTTTCCATTTGGCATTACAAAAAATATATTCTCTCTCTCTTCTCTGAAATGGGATTGTTGAAATCATGAAACAACCCATTTGATTGAAAGAAAAAAGATCATATTTTTGGATCAGTCTATAAGCTCTGTTTTGAAGTTTTTTTTTTTTTAAAAAACCATAATATGATCTCAAAATTAAAGGAAGAAGGTGCTCATGATGAAGCAAAACAAAGGAAGGGGAAAATGAAGAAAGCAAGAACGTGTTCAAGACAAGGGCAATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCATTTTTTGGAGGTAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGGTTAAGAGATAGAAGGATTAGGCTTTCAATTCCAACAGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTTTAAGCCAACCCAGCAAAGTCATTGATTGGCTTATTGATGTCACAAGGTTTGAAATTGATAAGCTCCCACCACTCCCTTTTCCAAAAGATTTTGACCCAAATGCTTCAATTCTTCATCATTCTGATATTGGAGATGCTGCTTTCAAGGCCAAAAATGAAGAAACTGATCACACACTTTTGGTTCAAACCAATGACATTAATGGAGTCTGTTCCCATTTTGAACCTCCAACCTTTCCATTCCCCTTCATGGACGATCAGACTAATTCAGCCCCATTTTCCTTCTGACCGTCGACGATACCATCGGAATTCTCTCCTTATCTTCTCAACGGCAGAAAATAAAGGTGTGTTTTAAAATAACTTTCAGACCCATGAAAATTTTGTTGTCTAATTTTTCAACTTTTATAAATTTGTATTAGATGGTTCAACTTTCAAATTTTTTATCTAATTGGTACTTTAAGTAACATTCAACAATAAAAAAGTTGAAAAATTAGTCAATATTTTTTAAACTAAAGAGCAAATAATATACAAAATCAATTTTCTTGTGAATAATTGTAATAATATTTGATAAATTAACCATTCATTTTTTATAACATAATGTATGATTGAGAATAGATAGTCATAAGGTGTTCATAATCCTTTCTCATTAATGTTATAAAATAAAACTTTGAATGATCATTATTAATTTTGTAATAAAACACCTACTAAATCCCATCAAGTAGGTGGTAATGTTAAAAAAACAAATACTAACACTAACCACCAGCCCCCGGCGAGGATCGAACTCGCGACCTTTCGCTTACGAAGCGAACGCACTACCACTATGCTACGGAGGCAATTTTTGATAACACAATTAAATTTATATAATCTTAATACATCATTTTATTTTAGTTTTCGTAGGTTTAATTGTCTATTGAAATTTTTTAAAAAAAGTATACATATAGGATGGAATAGTTATTCGAACTTATGTTGCTCAAATTGGTTAAATGATAATAAGTACTTTCGTGTCGTGAGAATATTGTCTCGAAGTATTATATTTTGAAAACAAACAAAGCTAACGTGGAAGGGTTATTTTAACCTATATAAGCTAATATGACATAATATTGATCTTGAGAAATTGTGAGTGTTAACTTAATGAATGGACGAAAATTTAGAGAAGAAACAAAGTCGTATAAAAGGAAAAAAAATGTCAAAGGGAGTTGAAGCTTTTCCCTCTTAGATAGACATTTTCCCTCCCCTAAATTGCATAAAATGTTATCATAAGTCAAATATAGTAACATTTCAACAATGGAAGACAAAATGCAACATTAATAAACAATAGAGACTAAAGTTAGAAAACACCCAAATAATTTGGATTCTGGGAATAAGACATAAACAGTCTTTGATTGGTAAAATATGAAACTTTCTCACTTCAAATAGATAAGCAGAAACAAGTTGTTTGATTCGTACAATCAAGTGCTGCAATTATCACATGGATTTTGTGGCTATGAGCAGAACCAATTTTTTGAATCATTCACTGTTTTCAAATGTTCTTCTTAGTGTTTATGGCCATAGAAAGTATGAGATGCTTTATACAATTATTTAGTTGGGTAAGACGAAGGAAGTGAAGAAAGAATATCAGATGCATACATATTTTGATTCATAACAAGAATATGTTCATGGGTTGAAAAACTTGTAAACCATCTTTACAACACTTAATGATTAGTCACAATGCTTCAGAGCATTATATATATTATAGGAAAAAAATATGAGAGTTTCATCACTATGAAAAGGTAAAATCAGATGGAGGTAGAGAATGTTAAAAAGAAGAAACTATCAAGTAAATAACTGTCTTCGTCTGCCTGACTTGGCGCGTAAATGAGCAGCCTCGACATATACGATTTCATCGACTAAGTCTTTGAAGACCAATCTTTCAATATCTAAGACAACGTTGGAGACGTCACCATAGAAATCAGTCCAACTTCCAGATCTTTGCATCATGTCTTCCTTTAAGATACTATCCAAACTCTCATCCTCCTCCGGTTTCTTTGTTTGGAGCTGTTCTATTTCAGAACATAGCTCCTTCAGAAGCTTTTGAGCACTAAGAGTTTTAGTTGCTAGTTTTTTGGATGTTGTCCAAGGCTCGGGTATTGCAGCAACAACAGACAATTCTCTAGCAAGAATCTCATTCACGGCATCAAAAATGAGCTTGCGATGAGATTTCTCTTGGTTCAGTTTTAAATCTGTAACTTTCAAAGAGCTACAGTCGTCCTTTCTTAACAAACTGCTTGTCTTGGTTTGCTCCAAGACGAAGAACAACTCGGGGTTGATTGGATGACCAGATGGATGGAGTTGAAATGTTGCTAAGCCTGAGCCAAGGTCCCGGAGTAAGAGGCCAGAAGCTAACAATATTTCGGATATGTATCTGTTATCTGGATCAGTATTCTCACATAATGATGCAATGTAATCTGTTTTTGCTTCATCATAGTGAGAGTTCAGGCGCCTGAGCTTCTGAACCAAGTTGTCAATGTTTTGCAGTTTCTTGCGGTTAATTTCTGTGCTAAGACCGGGCTCCACACTGTTTTCTGTGGCACTCCATTGGTATTCACCACAATCTCCAGAGCCTAAAGTCCTATTGCCTGAAATGTAAGCATCAAACAGTATAAGAATCAATCAAATTGAAAAAGAAGAGGAATGGTTGTACTACCATGATTAAATTATGAAATATTCCAATTGAATCAGAAAATGAATTTTGCTTTTGGGGACAGATTTGATCACCTTTAAGGGCCTTTGATATCTGCTTAACAGGAGATGGAGAAGGTTCGTCGTCCCTATATATAGAAGCATCAAGAATGGAGACTGGACTAGGGTGTTCAGGAGCAGGAGTAGCAAGTTCTGCCTGCAAGCCACAAAATGAAAACCTCATATTTGAGTTCTGAAGCAATCTAATAGACGTGTAGATTAGTTGCTGTAAATGCGGAGGAAAAAGAAAGGTCATTTACATTTTCCAATGAACGAGAATCTGAGTACTTTGAAGTCTTCATTTGTAAACCATGACTGCCATTAATGTCAGCAGGAAGTTCACTGCTGGTGACTTCAATATCTGTCTTTGAGTCCAAGGATAAATTACTGTCAGATATTTGAGATAAGTCATCCCCCTGGTTGCTCAAAGTTCTTGACTCATTGCTTACTTCACTCAATTGGTCATCCATTTGGGAGACATGGGATGGTTTCACTCTCGATCTTCCAACAGGAGAACCAGATTCAGTTCCCTGTCTGTTGGATTTCCATTTGGTTTTGTTTGTGTCAGATGGAGGAGTTGGTGGTCGAGATCGTTTGTCTTGCTCAGTTTTCTTCTGTTGCAGTCTTGGGCTCACGGACCCTGTGGTTTTTATTGAGCTTACTGTGTTTTCCTTAGGTAAATGTTGAGGCTTAGAAGAAGTATGGGTTTGTCTAACGTTTCTTGCATTATCTTTCTTTTTGGTGGAATTTGCACCGGAGTCCCTGTGACTGTTTTCCGGAGATGTATCTTTAACTACTCGGCTACCACTGGGGCTCTTTTTACCCTGTGAGGGTTTCTGAAGCTTCGGGAGACCAGGAAGGCCATCAATTTGAAGAACTGATGAAGCTGGGATTCCAGATTTTTCTACAAGTTTTGCTGGTTTCATGATCACAATTGGAGATTCCCCACACCTGGAAGAATCGGGCCTGCTAGTTGTTGCAGCCTTTTGGGTTTTTCTCCGACTTTGTTCACTGGTCAACCTAGAATTAACACTAGCGCTCTCCCGTTTCGGTTCATTCTCTCTTTGAGTTGCAGAAGGTTCCTCCTCCTTCCTAGTATCCAAGAGCCCCTTTGATTGCATAGCGTCAAGGATCTGTTTTAGTGCTCTAAGATCTTTCCCTGATTGTTTAAACTCCAAGTCTTCCAATCTTTTTTCAATTTCACTATAAACAGAAGGAAACGGGTTAGACGATCCAGCTAACCCTTTTGAATGCTTCATAGCAGATTTATCAAAGCCTCGAGTTCCATCTGGCTGCCTCCATGGTGCAACTTCCACAGGAAACTTCGAATTTGGTATAGGTTTCATAACAAAATCAGGATTCTTCCATCTTGGTGAAGTTGGGCCTTTCAACGTGTTCCGAGGAGAGTCAGTTCTAATTGGCCTGATAAAGTTTGCACCATCCAGTGAGCTAACAAAGGGGTCACCTTTAGCCTGAGCATCACTAGCCAAGGGGGAACCTGGAAGTGCTTCCAATCCCATTAACTTTGCCACAACACTAGGGGGATGCTTTCGAGATCCTGATGGTCGTGGTGGATCAGAAGAATTTTCACTAGAGCAATCACTACTGTGCAAGTTCTTCAAATTCCTAGTTGTATTTGACCCAGATTTGGAACCCTTAATTGAACTCTCCCGGCTGTCCAGTGAGAGCCTTGGAAAGTCTTTAAATTTTGGAGCTGACCGAATGGTATCTCGCGATTCAAAGGATAATCGATTAACCTCTCTCCCATCATATGAAAACCGAGGAGCATCTCTAGAGAATGATTGCAAATATCCATCTTTTACTTCGTGAGACAACCGATCGTGTTCTACAACTTCATTATAATACCATGGTGCATCTCGAAGTTTAGCAAGAACCAGAAGAGACTCCTTTAAATCAACAGGCATCTTCTGTTTCCAATCTGTATCAACCTTTGAAGCCCCATCTGCGGATTGGGATAGCTGTACAGGCCTTGGAGAGTCTCTATGCTTCATAGAACGACTCAGTGGTTCCTCACTAGTAGATGTCTTAACTGATAACGTTCTGGCTTCCCTATACATAGAATCCTTCACAACATCTCGAAGATCAAGATGTTGTCTCCCGACACGAGGAGAGGTATTTGACTGGTTCACTATAGAATCCCTTGAGGGCGTTCTTGATAAAAGTATCTGATCGAATGAGGACGCTTGCGACGGAGCTGTTTTGTTGTAATCACTGGAGGATAAGGAAGACGAGCAAGAAGAGAAGGAAGCTCTCGATAGTTCTTTATTAAACCTTTGTTTCTCATTGAAACTCTCATTTAGGGACATGTCCTGCAAGAACAAGATTCATAGTTTAAGATCCAGGAAGAACTCAAAATTTCCATACACAACTTAAATGCTTAACATAATTACAATGTTGTAAACTACTCGGCTTAAAAAATGGCTAAGAGTAATTAGAAGACTTACAGTTGCCTCTCTCTGAAAGGCATTGTACTCTTTTACTGCGCTGCCAATATTTAGATGAGAAGTGCCTGTAGAAGACAAGATCGAAAATAAATTGGCACGTTATCAATTTGCATACCCCTGGATTTTGATATATATATAAGAAACCAAGCTTTCATTGAGAAAGATAAAAAGATATACAAGAGGATAAAGAAACAAGCCCAATAACAAAAAGATCTAAATGAAATTCTATCCGGAAGAACGATGCTGAGCTCATAATTATATGAAGTCCGATTCACACACACACAAAGGAGCTAAATTTAATGCCTCGCAAAACCTCTCACCAAAATTTTCCAACCCTCTAAAGATTTTACCATTTCTCTCAATCCGGATGCCCCACAAATGACGAAAAACAAGACTGCCAAGGGATTTATAAACAATAACCAATTAAAGATTGTGAAGCTCGTTTGGAGTGGATCAAAACAGAAGCAATCTATCTGAAGTTCAATAAAACAAGCTCAAAGGATTGTCATTAGATTAGCCACATAATTACGAAAAGCATGACGTGTTTCCTTTTTTGCTCCACAGAACACCAATTACAGAGAAATTCATAAGACAGTGAAGTTAATAAATTAGGCAACACAAATTTCAATTCTGTTTCTCTATCCCCATAACAAAAAGGAAAATGAACAAACTTTTCAAGATAGGGAATAAAGTGGCATCTTCAATTCTTAGAAGAACATTAAAGTGATCAAAACATCAAAAACTATTAGGAAGCTTAAAACTTTGTAGCAGAAAGACAACAAGCCAAAGCAAGGTCAGATAGCAATACCAGGAGGAAGCCGCTTGTGTCTCATATGTCTTCCACTGAGTACATGCTGACGATCAAACAACTGCAAGATCCCAGTCATGCATCCTATTTGCTTCTGTAGATCTGGATTTTCATCAGCTAAAGAATGCAGAAGCTTTGCAGCCATCTTCGGGGTCTTCTCTTTCACAAGAAACTATGGAACTTTCCTCAGCTCAGTCATAGAAAGAACCACATACCAAAACAAAAACCCCAAATCTTAGGCTGTTCGAACAATCTAATGACTAGTGAAATGGATATTCTAACCAGTTATCTTCCAACCCCACCTAAAAGACCCTTTTTATCAGAAGAAAGACAAACACCTTTCTTCAAAAGGAATTAATTCTTATTCCTCATATTCCACGGAGTTCTATATGGTCCAAAAACCAAAAGATAAGGATAAAGAACTGCCAAAGCCCATGCCCTTTGAATTACAGCATCTCCCAAGAGATTCTCCACTCTAATAAAATTGCTTCTTGGGTTATATGTGCAAAACTCAATTACAGATTCAGAAAACAGCGCAATTAACAGCTTGAGATCACAAACATCAGCTCACAATATAAAATCCCAAACACACCACACACACACACACACACAAAAAAAAAAAAAAAAATCACCCCCCAAATTCTAAAATGCCCTTCTGGGTTCCTTAAAATTTTTCCAAATCTTGATTTCTTGCAGCAACAAAGAAAAATCCACAGCAAGAAGGAGCAAATGGGTAATGGTCAACGACG

Coding sequence (CDS)

ATGATCTCAAAATTAAAGGAAGAAGGTGCTCATGATGAAGCAAAACAAAGGAAGGGGAAAATGAAGAAAGCAAGAACGTGTTCAAGACAAGGGCAATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCATTTTTTGGAGGTAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGGTTAAGAGATAGAAGGATTAGGCTTTCAATTCCAACAGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTTTAAGCCAACCCAGCAAAGTCATTGATTGGCTTATTGATGTCACAAGGTTTGAAATTGATAAGCTCCCACCACTCCCTTTTCCAAAAGATTTTGACCCAAATGCTTCAATTCTTCATCATTCTGATATTGGAGATGCTGCTTTCAAGGCCAAAAATGAAGAAACTGATCACACACTTTTGGTTCAAACCAATGACATTAATGGAGTCTGTTCCCATTTTGAACCTCCAACCTTTCCATTCCCCTTCATGGACGATCAGACTAATTCAGCCCCATTTTCCTTCTGA

Protein sequence

MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF
Homology
BLAST of Cucsat.G14661 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.6e-32
Identity = 70/122 (57.38%), Postives = 85/122 (69.67%), Query Frame = 0

Query: 28  SRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLS 87
           SRQ      NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS+PTAIQLYDLQ++LGLS
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 88  QPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILHHSDIGDAAFKAKNEETDHTLLVQ 147
           QPSKVIDWL++  + ++DKLPPL FP  F+    +  +   G++ F      T  T    
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFN---QMYPNLIFGNSGFGESPSSTTSTTFPG 160

Query: 148 TN 150
           TN
Sbjct: 162 TN 160

BLAST of Cucsat.G14661 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0

Query: 37  NPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWL 96
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS+ TAIQ+YDLQ +LGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 97  IDVTRFEIDKLPPLPFPKDF---DPNASILHHS 127
           ++V + ++D LPPL FP  F   +PN + L  S
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES 113

BLAST of Cucsat.G14661 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28
Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0

Query: 4   KLKEEGAHDEAKQRKGK--MKKART--CSRQGQFLRG-NPRIFRVSPFFGGKDRHSKVCT 63
           ++KE+    E +   GK  +KK  T   S    +++  +PRI RVS  FGGKDRHSKVCT
Sbjct: 24  EVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCT 83

Query: 64  IKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDP 123
           ++GLRDRR+RLS+PTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPLP   +   
Sbjct: 84  LRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE--- 143

Query: 124 NASILHH 126
           N SI +H
Sbjct: 144 NFSIFNH 147

BLAST of Cucsat.G14661 vs. ExPASy Swiss-Prot
Match: A2XMN1 (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-19
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 0

Query: 39  RIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLID 98
           RI+RV    GGKDRHSKV T KG+RDRR+RLS+ TAIQ YDLQ++LG  QPSK I+WLI+
Sbjct: 43  RIYRVRA-TGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIN 102

Query: 99  VTRFEIDKLPPLPFPKDFDPNA-SILHHSDIGDAA 133
                ID LP L      DP A + + H+   DAA
Sbjct: 103 AASPAIDTLPSL------DPAAFAAIPHAAAADAA 130

BLAST of Cucsat.G14661 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18
Identity = 51/100 (51.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query: 11  HDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLS 70
           H E + RK +            +   + RI RVS   GGKDRHSKV T KGLRDRRIRLS
Sbjct: 12  HQEQQSRKLQRFSEDNTGLMRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLS 71

Query: 71  IPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL 111
           + TAIQ YDLQ++LG  QPSK ++WLI+     I  LP L
Sbjct: 72  VATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLL 111

BLAST of Cucsat.G14661 vs. NCBI nr
Match: XP_011660343.1 (transcription factor TCP5 [Cucumis sativus] >KGN64062.1 hypothetical protein Csa_014153 [Cucumis sativus])

HSP 1 Score: 369 bits (946), Expect = 8.30e-129
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK
Sbjct: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120

Query: 121 SILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF 179
           SILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF
Sbjct: 121 SILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF 179

BLAST of Cucsat.G14661 vs. NCBI nr
Match: XP_008445912.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >TYJ98944.1 transcription factor TCP5 [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (829), Expect = 5.95e-111
Identity = 166/181 (91.71%), Postives = 170/181 (93.92%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLKE+GAHDEAKQ +GK KKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK
Sbjct: 1   MISKLKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNA 120

Query: 121 SILHHSDIG-DAAF-KAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFS 179
           SILHHSDIG DAA  KAKNEETD TLLVQTNDING  SHFEPP+FPFPFM  QTNS+PFS
Sbjct: 121 SILHHSDIGGDAALMKAKNEETDQTLLVQTNDINGDSSHFEPPSFPFPFMY-QTNSSPFS 180

BLAST of Cucsat.G14661 vs. NCBI nr
Match: XP_038895251.1 (transcription factor PCF6 [Benincasa hispida])

HSP 1 Score: 260 bits (664), Expect = 2.19e-85
Identity = 142/200 (71.00%), Postives = 149/200 (74.50%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKL +EG HDEAKQ +GK KKA        FLRGNPRI RVS  FGGKDRHSKVCT+K
Sbjct: 1   MISKLTKEGVHDEAKQMEGKRKKA--------FLRGNPRILRVSSLFGGKDRHSKVCTVK 60

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNA
Sbjct: 61  GLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNA 120

Query: 121 SILHHS----------DIGDAAFKAKNEETDHTLL-----------VQTNDINGVCSHFE 179
           SILHHS          DI DAA  AKNEETD  LL           VQTN I   C HF+
Sbjct: 121 SILHHSSLFLPQIPHFDIADAAVTAKNEETDQRLLLHKLSSLSALQVQTNAIKENCCHFQ 180

BLAST of Cucsat.G14661 vs. NCBI nr
Match: XP_023001048.1 (transcription factor TCP13-like [Cucurbita maxima])

HSP 1 Score: 260 bits (664), Expect = 3.63e-85
Identity = 138/194 (71.13%), Postives = 149/194 (76.80%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLK+EG H EAKQ +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPL FPKDFDPNA
Sbjct: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNA 127

Query: 121 SILHHSDIGDAAFKAKNEETDHTLL----------------VQTNDINGVCSHFEPPTFP 178
           S LHH DI DAA KAK+EET   LL                +QTN +   C HF+PP+FP
Sbjct: 128 SFLHHFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFP 187

BLAST of Cucsat.G14661 vs. NCBI nr
Match: KAG6584403.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259 bits (663), Expect = 5.15e-85
Identity = 138/194 (71.13%), Postives = 149/194 (76.80%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLK+EG H EAKQ +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTRF+IDKLPPL FPKDFDPNA
Sbjct: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNA 127

Query: 121 SILHHSDIGDAAFKAKNEETDHTLL----------------VQTNDINGVCSHFEPPTFP 178
           S LHH DI DAA KAK+EET   LL                ++TN +   C HF+PP+FP
Sbjct: 128 SFLHHLDISDAAAKAKHEETGMLLLQKLSPSPNHASFSALQLRTNAMTENCCHFDPPSFP 187

BLAST of Cucsat.G14661 vs. ExPASy TrEMBL
Match: A0A0A0LTI3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039270 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 4.02e-129
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK
Sbjct: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120

Query: 121 SILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF 179
           SILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF
Sbjct: 121 SILHHSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF 179

BLAST of Cucsat.G14661 vs. ExPASy TrEMBL
Match: A0A5D3BIQ9 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001450 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 2.88e-111
Identity = 166/181 (91.71%), Postives = 170/181 (93.92%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLKE+GAHDEAKQ +GK KKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK
Sbjct: 1   MISKLKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNA 120

Query: 121 SILHHSDIG-DAAF-KAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFS 179
           SILHHSDIG DAA  KAKNEETD TLLVQTNDING  SHFEPP+FPFPFM  QTNS+PFS
Sbjct: 121 SILHHSDIGGDAALMKAKNEETDQTLLVQTNDINGDSSHFEPPSFPFPFMY-QTNSSPFS 180

BLAST of Cucsat.G14661 vs. ExPASy TrEMBL
Match: A0A1S3BEN2 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 2.88e-111
Identity = 166/181 (91.71%), Postives = 170/181 (93.92%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLKE+GAHDEAKQ +GK KKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK
Sbjct: 1   MISKLKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNA 120

Query: 121 SILHHSDIG-DAAF-KAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFS 179
           SILHHSDIG DAA  KAKNEETD TLLVQTNDING  SHFEPP+FPFPFM  QTNS+PFS
Sbjct: 121 SILHHSDIGGDAALMKAKNEETDQTLLVQTNDINGDSSHFEPPSFPFPFMY-QTNSSPFS 180

BLAST of Cucsat.G14661 vs. ExPASy TrEMBL
Match: A0A6J1KPD9 (transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4 SV=1)

HSP 1 Score: 260 bits (664), Expect = 1.76e-85
Identity = 138/194 (71.13%), Postives = 149/194 (76.80%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MISKLK+EG H EAKQ +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 8   MISKLKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPL FPKDFDPNA
Sbjct: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNA 127

Query: 121 SILHHSDIGDAAFKAKNEETDHTLL----------------VQTNDINGVCSHFEPPTFP 178
           S LHH DI DAA KAK+EET   LL                +QTN +   C HF+PP+FP
Sbjct: 128 SFLHHFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFP 187

BLAST of Cucsat.G14661 vs. ExPASy TrEMBL
Match: A0A6J1E7C6 (transcription factor PCF8-like OS=Cucurbita moschata OX=3662 GN=LOC111431389 PE=4 SV=1)

HSP 1 Score: 248 bits (634), Expect = 6.19e-81
Identity = 136/194 (70.10%), Postives = 146/194 (75.26%), Query Frame = 0

Query: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60
           MIS+LK EG H EAKQ +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 8   MISRLKPEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67

Query: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTR +IDKLPPL FPKDFDPNA
Sbjct: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRVDIDKLPPLHFPKDFDPNA 127

Query: 121 SILHHSDIGDAAFKAKNEETDHTLL----------------VQTNDINGVCSHFEPPTFP 178
           S LH  DI DAA KAK+EET   LL                +QTN +   C HF+PP+FP
Sbjct: 128 SFLH-LDIADAAAKAKHEETGMLLLQKLSPSPNNASFSALQLQTNAMTENCCHFDPPSFP 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FME36.6e-3257.38Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1[more]
Q9LEZ91.8e-2967.74Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1[more]
Q9S7W51.2e-2853.54Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1[more]
A2XMN13.8e-1955.79Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV... [more]
Q9C7581.4e-1851.00Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_011660343.18.30e-129100.00transcription factor TCP5 [Cucumis sativus] >KGN64062.1 hypothetical protein Csa... [more]
XP_008445912.15.95e-11191.71PREDICTED: transcription factor TCP5 [Cucumis melo] >TYJ98944.1 transcription fa... [more]
XP_038895251.12.19e-8571.00transcription factor PCF6 [Benincasa hispida][more]
XP_023001048.13.63e-8571.13transcription factor TCP13-like [Cucurbita maxima][more]
KAG6584403.15.15e-8571.13Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
A0A0A0LTI34.02e-129100.00TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039270 PE=4 SV... [more]
A0A5D3BIQ92.88e-11191.71Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BEN22.88e-11191.71transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1[more]
A0A6J1KPD91.76e-8571.13transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4... [more]
A0A6J1E7C66.19e-8170.10transcription factor PCF8-like OS=Cucurbita moschata OX=3662 GN=LOC111431389 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 49..119
e-value: 2.8E-23
score: 83.2
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 49..107
score: 25.948359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR31072:SF154TCP FAMILY TRANSCRIPTION FACTORcoord: 3..116
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 3..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14661.T1Cucsat.G14661.T1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding