Cucsat.G14336 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14336
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionAminoacyl-tRNA ligase
Locationctg1869: 6094566 .. 6096977 (-)
RNA-Seq ExpressionCucsat.G14336
SyntenyCucsat.G14336
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTGGGAAGGTATTCCGTTTCATATATATTCCCTCCAATCTTTTGTTCTTCATTTTCTTAGCAATCACCCATTGGAAATTTGCTAAGAAACAAAATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCACTAACTGACAACAACCACACCACCCTCTTACACCAAATGACTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACCTTGAAGTTCACCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAACACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGATTCATCAACCATTCTGAAATGCGGTTAGTTTTTTGAAGTTCACTCATCATGATCATGTTAAGTGCTTAGTTTAATCTTCTGTGTTTATGGTTTTTCTAGATTTAGTGAACTCGAATGAAACCATTTCTCTTCTCATGCTGAACATGATATATGAAATTCCCATTTCAGATGCTGATAACAATTGGTATCAAGGTAATAGTATAAAAGTTCGAATGCTGTTGATTTAGATTTAGCTAGTTACATGTATTGGATGCATAGAGATTTAACACTCAGTAAAACCTCAGTCTTGTTTTTGCCCACCAATTGATAGACTTTAAAATTTTTGTATATTTTATAAATATTTTGGTTCTTTTGGAGAATGCTCCTACTAGATTTTTAAAACAAAATAGTGTATACCTACCTAATAGTGTCATGTTTGAAGATTGTTCAATTTGATGAGAATTTGGTAGAAGCAGAATGTATACCTGCCTCACTGTATTAAACTAAGTCACAGTCTTAATAACTCAGAATTTTTGTATGAGTCTCAAGAAGCTTCCTATGTACTTGTATTGCGGTATTCTTCGAATTATCTCGATGTAAGTTGAGTTTGGTTTGGTGAGAGGAATTCTCACGACGCTAAGATAGAGCCTAAAGTTGTTCACTAAAAGATAAGTTGTGTGAGTTAGTGTAGAAATTGTTTAAGGGATAAGTATTTCATTCCAATTGCTTAACTTCGTATTAACTCCTGAACTCTCTTTCCTTGGGGCATACATACAACGCTAGATGTAGATTATATTTCACCAAAACATTGTTTACCTAATCTCGGTATCTCTTTATCTCTTCATTGCTTATTCCAAAAGTCTATTGATCTTATTATAACATTGTGTATGTTTTGTGAGCTTTTGTGTTAGATACACACTCAATTTCAAGTATTTTTGGAAGTTCAAAAACCAATATATTTTTTAAGAAAAGAAACAAATTCTTCAAAATTCAAGTCTATGAACTTATAATTTTAAAGTAAAACAAATAGAAATCTACAACGGATGTGCGTGGATTCAAATCAAGGAAAATAGCTTCCAACAAAAATGGCCATCACCAACGCCACCGTCGCCGCCAGGTTTCCTGTCCAAAACAGAACAAAAACAACACAATGATTTAATTAAATGTTTGTAACTCAAACAGGACCAATAAAATTTTACGAAGAATGAGTATGTTATCACCTGAAAGCAGTTGAGGAGCGGCCGTAGAGGGTGCCGGTGAGGACAACGTAGGAGGTGGAGCTAATATTGAAGCCGGTGGAGAAGGCGCTGTTGTAGGAGGGAAAAATGCCGGCGGAGAAGACACTGTTGGAGGAGGGACAGATGCCGGTGGAGAAGACACCGTTGGAGCAGGGGCAGATGCCGGTGGAGGTGAAACAGAGGAAGGCGAAACGCTCTCGTAAAACGGATAAAGCTCATAACGAACACTACAACTGGGAAACAAAATCCTACCGCCCTTTTTACCACTACAACAATCAGGAAATCTTCGAGTAGCATTGCTCAAGCATTTCCTACAATTTGAGTTGGACAAATCCCCTGTACACTGCGCCAGCGTGTAAACCGTCTCATTTCCAAAACTAGCTTCTTTAGTAGCAAATTTCAAATCCCCTTTCCGGGAAGAAGCCTTAACCACCGTATCGTTCAACGCAGAACCCACAATTTGGTCAAAACTGCTTTTTTCCTCCCCAATTTCTTGGAGGTTAATCAAAATCATCGACGGCCTCTCTGCCACGATGGAGAAGAAGGATCGGTTGGAATAGCGGAAAAAGCAATCGTCGAACCAAATAATGGCCTCTACACTAAGAGGGCAGTATTGTTGAGAGGAATTGGAGGTGGCTGTGGCAACGCACTGGTGGCATGCAGTGGCGTTTAGATCGCCACGGCACTGGAAGTGGGCATAAACTGGGGGGACAGAAGATTTGTGGTAGAATTTTCGAGAAGAATTGGAGGAGAGATATGAAGAGAGGGTATTGAGGTTGGAAAAGAAGTTGGAATTTGGTGAGATGGTGGTGTTGGAGCAGTAACGGAAAGGATCCATAAAAGTTTCTGAGCTGCCATGGGTGAAAAGGAAGGTGAAGAAGAAGAGATGGAGTAGAAATTTCATATTGGAGGCTTCTCCTTTTTCTTTGGTTGTTTATTTCAATTAATTCCCAACCCGAAGGCATCCTTTTATATTAATGAAATGTTTTTAGATCT

Coding sequence (CDS)

ATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCACTAACTGACAACAACCACACCACCCTCTTACACCAAATGACTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACCTTGAAGTTCACCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAACACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA

Protein sequence

MENPVEALEAKLKKVEDEEVHNIPLTDNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPNLELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPESWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDYNLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL
Homology
BLAST of Cucsat.G14336 vs. NCBI nr
Match: KAE8652678.1 (hypothetical protein Csa_013756 [Cucumis sativus])

HSP 1 Score: 685 bits (1768), Expect = 1.16e-248
Identity = 336/342 (98.25%), Postives = 338/342 (98.83%), Query Frame = 0

Query: 1   MENPVEALEAKLKKVEDEEVHNIPLTDNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPNL 60
           MENPVEALEAKLKKVEDEEVHNIP+TDNNHTTLLHQM LLLNAHQQRLLQYAPTHRMPNL
Sbjct: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60

Query: 61  ELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120
           ELPMFDGTDTLMWILKMERY EVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES
Sbjct: 61  ELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120

Query: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180
           WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG
Sbjct: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180

Query: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDYN 240
           LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVA NSTKRKGTVKERSVVVKVVSWTDYN
Sbjct: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKERSVVVKVVSWTDYN 240

Query: 241 LISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGED 300
           LISK+LATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGED
Sbjct: 241 LISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGED 300

Query: 301 DEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL 342
           DEVILGNLWLVDLGKMEVDWKNL MKLEVGKEIVTLRKDPSL
Sbjct: 301 DEVILGNLWLVDLGKMEVDWKNLTMKLEVGKEIVTLRKDPSL 342

BLAST of Cucsat.G14336 vs. NCBI nr
Match: KAA0056890.1 (aminoacyl-tRNA ligase [Cucumis melo var. makuwa] >TYJ99393.1 aminoacyl-tRNA ligase [Cucumis melo var. makuwa])

HSP 1 Score: 603 bits (1554), Expect = 4.97e-216
Identity = 298/343 (86.88%), Postives = 313/343 (91.25%), Query Frame = 0

Query: 1   MENPVEALEAKLKKVEDEEVHNIPLT-DNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPN 60
           MENPVEAL+AKLKKVEDEEVHNIP T DNN TTL+HQM LLLN HQQ L QYAPTHRMPN
Sbjct: 1   MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN 60

Query: 61  LELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPE 120
           LELPMFDGTDTLMWILKMERY EVHHIDDIA+MM+TILLCMSGQALAWFRCFQNWG PPE
Sbjct: 61  LELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPE 120

Query: 121 SWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMN 180
           SW EFR SLY RFGD   V S+F+GL+QEGSV EYCSKFE+LGALLPEL H V+EAKFMN
Sbjct: 121 SWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMN 180

Query: 181 GLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDY 240
           GLKTEIR +VRML  + ILDIMHRARL E KNNVALNSTKRKGTVKERSV+VKVVSWTDY
Sbjct: 181 GLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWTDY 240

Query: 241 NLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGE 300
           NLISK+LATDLKLKLDMYGDYSVVLGSGK VKGDGICRGVLLQIGN+TY EDFFPLQMGE
Sbjct: 241 NLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGE 300

Query: 301 DDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL 342
           DDEVILGNLWLV LGKMEVDWKNLPMKL+VGKE VTLRKDP L
Sbjct: 301 DDEVILGNLWLVALGKMEVDWKNLPMKLKVGKETVTLRKDPFL 343

BLAST of Cucsat.G14336 vs. NCBI nr
Match: XP_016900762.1 (PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo])

HSP 1 Score: 580 bits (1496), Expect = 3.29e-206
Identity = 286/329 (86.93%), Postives = 301/329 (91.49%), Query Frame = 0

Query: 1   MENPVEALEAKLKKVEDEEVHNIPLT-DNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPN 60
           MENPVEAL+AKLKKVEDEEVHNIP T DNN TTL+HQM LLLN HQQ L QYAPTHRMPN
Sbjct: 1   MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN 60

Query: 61  LELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPE 120
           LELPMFDGTDTLMWILKMERY EVHHIDDIA+MM+TILLCMSGQALAWFRCFQNWG PPE
Sbjct: 61  LELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPE 120

Query: 121 SWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMN 180
           SW EFR SLY RFGD   V S+F+GL+QEGSV EYCSKFE+LGALLPEL H V+EAKFMN
Sbjct: 121 SWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMN 180

Query: 181 GLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDY 240
           GLKTEIR +VRML  + ILDIMHRARL E KNNVALNSTKRKGTVKERSV+VKVVSWTDY
Sbjct: 181 GLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWTDY 240

Query: 241 NLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGE 300
           NLISK+LATDLKLKLDMYGDYSVVLGSGK VKGDGICRGVLLQIGN+TY EDFFPLQMGE
Sbjct: 241 NLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGE 300

Query: 301 DDEVILGNLWLVDLGKMEVDWKNLPMKLE 328
           DDEVILGNLWLV LGKMEVDWKNLPMKL+
Sbjct: 301 DDEVILGNLWLVALGKMEVDWKNLPMKLK 329

BLAST of Cucsat.G14336 vs. NCBI nr
Match: TYK06549.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 161 bits (407), Expect = 1.78e-40
Identity = 105/344 (30.52%), Postives = 164/344 (47.67%), Query Frame = 0

Query: 52  APTHRMPNLELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCF 111
           A  ++   +E+P+F G D   W+ + ERY ++H + D  +M+ + +    G AL W+R  
Sbjct: 119 ADRNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTI-SFDGPALNWYRS- 178

Query: 112 QNWGNPPESWGEFRGSLYKRFGDGH--RVLSRFIGLQQEGSVGEYCSKFESLGALLPELS 171
           Q       SW   +  L  RF      +VL RF+ ++QE +V +Y + F+ L A L ++ 
Sbjct: 179 QEEREKFTSWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVP 238

Query: 172 HCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIK------------------- 231
             VV+  FMNGL   IR EVR+   +G+ ++M  A+L E +                   
Sbjct: 239 DPVVKDTFMNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQ 298

Query: 232 --------------------------------NNVALNSTKRKGTVKERSVVVKVVSWTD 291
                                           NN  + + K KG ++ER V++ +     
Sbjct: 299 QNTVNNRTPANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGAT 358

Query: 292 YNLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMG 342
           +N IS+ L   L+L +   G Y V+LGSG  V+G GIC  V +Q+ N    E+F PL++G
Sbjct: 359 HNFISEKLVESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELG 418

BLAST of Cucsat.G14336 vs. NCBI nr
Match: KAA0037097.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (405), Expect = 1.71e-39
Identity = 105/344 (30.52%), Postives = 163/344 (47.38%), Query Frame = 0

Query: 52  APTHRMPNLELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCF 111
           A  ++   +E+P+F G D   W+ + ERY ++H + D  +M+ + +    G AL W+R  
Sbjct: 119 ADRNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTI-SFDGPALNWYRS- 178

Query: 112 QNWGNPPESWGEFRGSLYKRFGDGH--RVLSRFIGLQQEGSVGEYCSKFESLGALLPELS 171
           Q       SW   +  L  RF      +VL RF+ ++QE +V +Y + F+ L A L ++ 
Sbjct: 179 QEEREKFTSWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVP 238

Query: 172 HCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIK------------------- 231
             VV+  FMNGL   IR EVR+   +G+ ++M  A+L E +                   
Sbjct: 239 DPVVKDTFMNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQ 298

Query: 232 --------------------------------NNVALNSTKRKGTVKERSVVVKVVSWTD 291
                                           NN  + + K KG ++ER V++ +     
Sbjct: 299 QNTVNNRTPANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGAT 358

Query: 292 YNLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMG 342
           +N IS+ L   L+L +   G Y V+LGSG  V+G GIC  V +Q+ N    E+F PL++G
Sbjct: 359 HNFISEKLVESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELG 418

BLAST of Cucsat.G14336 vs. ExPASy TrEMBL
Match: A0A5D3BJD9 (Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006110 PE=4 SV=1)

HSP 1 Score: 603 bits (1554), Expect = 2.41e-216
Identity = 298/343 (86.88%), Postives = 313/343 (91.25%), Query Frame = 0

Query: 1   MENPVEALEAKLKKVEDEEVHNIPLT-DNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPN 60
           MENPVEAL+AKLKKVEDEEVHNIP T DNN TTL+HQM LLLN HQQ L QYAPTHRMPN
Sbjct: 1   MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN 60

Query: 61  LELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPE 120
           LELPMFDGTDTLMWILKMERY EVHHIDDIA+MM+TILLCMSGQALAWFRCFQNWG PPE
Sbjct: 61  LELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPE 120

Query: 121 SWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMN 180
           SW EFR SLY RFGD   V S+F+GL+QEGSV EYCSKFE+LGALLPEL H V+EAKFMN
Sbjct: 121 SWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMN 180

Query: 181 GLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDY 240
           GLKTEIR +VRML  + ILDIMHRARL E KNNVALNSTKRKGTVKERSV+VKVVSWTDY
Sbjct: 181 GLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWTDY 240

Query: 241 NLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGE 300
           NLISK+LATDLKLKLDMYGDYSVVLGSGK VKGDGICRGVLLQIGN+TY EDFFPLQMGE
Sbjct: 241 NLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGE 300

Query: 301 DDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL 342
           DDEVILGNLWLV LGKMEVDWKNLPMKL+VGKE VTLRKDP L
Sbjct: 301 DDEVILGNLWLVALGKMEVDWKNLPMKLKVGKETVTLRKDPFL 343

BLAST of Cucsat.G14336 vs. ExPASy TrEMBL
Match: A0A1S4DXQ7 (uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 1.59e-206
Identity = 286/329 (86.93%), Postives = 301/329 (91.49%), Query Frame = 0

Query: 1   MENPVEALEAKLKKVEDEEVHNIPLT-DNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPN 60
           MENPVEAL+AKLKKVEDEEVHNIP T DNN TTL+HQM LLLN HQQ L QYAPTHRMPN
Sbjct: 1   MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN 60

Query: 61  LELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPE 120
           LELPMFDGTDTLMWILKMERY EVHHIDDIA+MM+TILLCMSGQALAWFRCFQNWG PPE
Sbjct: 61  LELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPE 120

Query: 121 SWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMN 180
           SW EFR SLY RFGD   V S+F+GL+QEGSV EYCSKFE+LGALLPEL H V+EAKFMN
Sbjct: 121 SWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMN 180

Query: 181 GLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDY 240
           GLKTEIR +VRML  + ILDIMHRARL E KNNVALNSTKRKGTVKERSV+VKVVSWTDY
Sbjct: 181 GLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWTDY 240

Query: 241 NLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGE 300
           NLISK+LATDLKLKLDMYGDYSVVLGSGK VKGDGICRGVLLQIGN+TY EDFFPLQMGE
Sbjct: 241 NLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGE 300

Query: 301 DDEVILGNLWLVDLGKMEVDWKNLPMKLE 328
           DDEVILGNLWLV LGKMEVDWKNLPMKL+
Sbjct: 301 DDEVILGNLWLVALGKMEVDWKNLPMKLK 329

BLAST of Cucsat.G14336 vs. ExPASy TrEMBL
Match: A0A0A0LUB3 (Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064860 PE=4 SV=1)

HSP 1 Score: 462 bits (1188), Expect = 2.65e-162
Identity = 224/235 (95.32%), Postives = 230/235 (97.87%), Query Frame = 0

Query: 1   MENPVEALEAKLKKVEDEEVHNIPLTDNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPNL 60
           MENPVEALEAKLKKVEDEEVHNIP+TDNNHTTLLHQM LLLNAHQQRLLQYAPTHRMPNL
Sbjct: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60

Query: 61  ELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120
           ELPMFDGTDTLMWILKMERY EVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES
Sbjct: 61  ELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120

Query: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180
           WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG
Sbjct: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180

Query: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVS 235
           LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVA NSTKRKGTVKE S+++ ++S
Sbjct: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKESSLIMIMLS 235

BLAST of Cucsat.G14336 vs. ExPASy TrEMBL
Match: A0A5D3C860 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00050 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 8.64e-41
Identity = 105/344 (30.52%), Postives = 164/344 (47.67%), Query Frame = 0

Query: 52  APTHRMPNLELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCF 111
           A  ++   +E+P+F G D   W+ + ERY ++H + D  +M+ + +    G AL W+R  
Sbjct: 119 ADRNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTI-SFDGPALNWYRS- 178

Query: 112 QNWGNPPESWGEFRGSLYKRFGDGH--RVLSRFIGLQQEGSVGEYCSKFESLGALLPELS 171
           Q       SW   +  L  RF      +VL RF+ ++QE +V +Y + F+ L A L ++ 
Sbjct: 179 QEEREKFTSWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVP 238

Query: 172 HCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIK------------------- 231
             VV+  FMNGL   IR EVR+   +G+ ++M  A+L E +                   
Sbjct: 239 DPVVKDTFMNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQ 298

Query: 232 --------------------------------NNVALNSTKRKGTVKERSVVVKVVSWTD 291
                                           NN  + + K KG ++ER V++ +     
Sbjct: 299 QNTVNNRTPANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGAT 358

Query: 292 YNLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMG 342
           +N IS+ L   L+L +   G Y V+LGSG  V+G GIC  V +Q+ N    E+F PL++G
Sbjct: 359 HNFISEKLVESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELG 418

BLAST of Cucsat.G14336 vs. ExPASy TrEMBL
Match: A0A5A7T6B1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G002030 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 8.28e-40
Identity = 105/344 (30.52%), Postives = 163/344 (47.38%), Query Frame = 0

Query: 52  APTHRMPNLELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCF 111
           A  ++   +E+P+F G D   W+ + ERY ++H + D  +M+ + +    G AL W+R  
Sbjct: 119 ADRNKFKKVEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKMLVSTI-SFDGPALNWYRS- 178

Query: 112 QNWGNPPESWGEFRGSLYKRFGDGH--RVLSRFIGLQQEGSVGEYCSKFESLGALLPELS 171
           Q       SW   +  L  RF      +VL RF+ ++QE +V +Y + F+ L A L ++ 
Sbjct: 179 QEEREKFTSWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVP 238

Query: 172 HCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIK------------------- 231
             VV+  FMNGL   IR EVR+   +G+ ++M  A+L E +                   
Sbjct: 239 DPVVKDTFMNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQ 298

Query: 232 --------------------------------NNVALNSTKRKGTVKERSVVVKVVSWTD 291
                                           NN  + + K KG ++ER V++ +     
Sbjct: 299 QNTVNNRTPANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGAT 358

Query: 292 YNLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMG 342
           +N IS+ L   L+L +   G Y V+LGSG  V+G GIC  V +Q+ N    E+F PL++G
Sbjct: 359 HNFISEKLVESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELG 418

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8652678.11.16e-24898.25hypothetical protein Csa_013756 [Cucumis sativus][more]
KAA0056890.14.97e-21686.88aminoacyl-tRNA ligase [Cucumis melo var. makuwa] >TYJ99393.1 aminoacyl-tRNA liga... [more]
XP_016900762.13.29e-20686.93PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo][more]
TYK06549.11.78e-4030.52transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
KAA0037097.11.71e-3930.52Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3BJD92.41e-21686.88Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24... [more]
A0A1S4DXQ71.59e-20686.93uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=... [more]
A0A0A0LUB32.65e-16295.32Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064... [more]
A0A5D3C8608.64e-4130.52Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7T6B18.28e-4030.52Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 98..182
e-value: 5.4E-9
score: 36.2
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 216..338
e-value: 2.3E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 2..220
NoneNo IPR availablePANTHERPTHR34482:SF14RETROTRANSPOSON GAG DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 2..220
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 221..311
e-value: 4.06216E-8
score: 48.4868

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14336.T1Cucsat.G14336.T1mRNA
Cucsat.G14336.T4Cucsat.G14336.T4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity