Cucsat.G14278 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G14278
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor bHLH137
Location	ctg1869: 5312608 .. 5314882 (-)
RNA-Seq Expression	Cucsat.G14278
Synteny	Cucsat.G14278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTGTCTATCTCTATCTTAACTCTTTATATAAGCCTGACCCTCTGAGTATTTTCTTGCACTCACTTTTTCTAGACCTGAATCAATAGCTTCCATTCAAAGAGAGAGAGAAAAGAAAAGAAAAAAAACAATGGCAGCCTTTTCATATCAATACCAACCATTTCTTCTTGACTCTATTTTCTTGCACAATAACAATCCTCTTAAAATGGGAGGCTTTTTTGATGAACAGAATTTCAACACCAATTGTTTCTCCCCATTTTACCCTCAAGATCATCAACCACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAAGAACAACCCATTTACCATTTTCCTGACCTCTCTAAACAAAGCCCTGAATCTTCAACTTTGGTGGACCGGTCGGACAGCGCTGAGCTGCCGGTTGGAGATCAGTTGAAGCCGGCTGTTACTGTTACCGTCACTTCCCCTTGTAGTAAGAAAAGAAAGAGTCGGAATAATTCCTCCGCCTCCTCCGCCCAGTCCAAGGTCTAGAATAAATTTTCATTTTTTATTTTATTGGTTTTTTATTGTATTTTGTAATTTATATAAATTCCCCTTATATATAGATTATATATATATATTTAATTTCAGGGGAGTAATGATCAGAGCAACGGGAAAAAGGCGAAAAATAAAGGAGAAGTAGAAGAAGGGAAAGAAAGAGATCAAAAGGCCAAAAGTGGGAAGAAATTATTGGAGGAGAAGTTAAAAGATTCAGAAGATGGAGGTGCAACCACCGGTTACATTCATGTCAGAGCAAGAAGGGGCCAAGCCACTGATAGCCACAGTCTTGCTGAGAGGGTAATTAATTATTAATATAGTTAATTAATAATTTAAAAAGTATAAAGTTTTAATTATTTGAAAAGAAATATTTAAAGTATACCCCACACGCTAAGAACGACATGTCGTTGTCTTGTCATTTCAGGTGAGAAGAGAGAAGATTAGTGAAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAGGTAAACTTATACTTATATACTTCTATTTCATTCATTCATTCCAATTAAAATTCTTTTCTTTTATTATTATTAATTAATTAATTAATTTGGTGCTAAAAAATGGCCATGTGGGTTTTGGTGATGAATAGGTTACAGGGAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCTCTACAAAATCAAGTTGAGGTATAACACTGTTTTAAAATAATTTCTTTAATCAATCTCATAATTATATCATTAAATTTCACTAACTTCTATTTTTCTTTCCAGTTTCTCTCCATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTAGACGGTCTCATGATTCAACCAGAGGTGAGCCAAAAATAAAAACCATTCAAAAAATATTAATTTTGATTAAAAAAAACTCATTTTTAATTAATATATATATATATTATTTAATTTTGACCAGACGACGTCGTTGAGTAGCATAACACCAACACTACCGGCGATGGCGCAATGCAGTGTCGTATCACAGCCGGCGTTGATCGAACGACGCCTCCGGCGACCCCATCTCCGGCAATCTCCACCGGGAATAATTTTCCCTTAATGGACCCTTCAGCTAATTTGTTTCTACTTCAACAAGGGATAAGCCCAAGTAACGGTTACTCCCAATCGTCACAGGTAATTAAATATAATGTAATGTAAGATATTAGATTATTGGGGATTTAATTAATTTGAGGACATTAGAAGTAACATTCAACATCGTTATCAGGATAACGTTAAAGTTTCATCATGGGATGTGGAAGACCAAAAAAGAAAGCAGCTTCTTATTTCATCAGGAATTGGCGACAACTTGTGTTACTTCCATTAAAGAAAGCTCTCTACTATCTCATTAAAATTAAATTTCTAAAAAAAAAAGAAAGAAAATGAAGAGGGATACGAAGTTGACAGAGAACCTGAATAAAGTGGAAGTAACAAAAATGAATGGACGAAGAACACAAAGGATCTGATCTTTTTCAAAGACATTAAATTGTGGCTGCTCAAGTTTCGAGAATCTCCAGTCATTTTTTTAGATTAAATAAATAAATTTATTTATTTCAAATGTATTAGTCTTAGATGAAAGAGAAAAAAAAAAATAAAAAAACTGATTTGTTAGCTTGTAAGTTGTATCCATTTTCATTTTATATGTATGTAATTTCCATTCATCTGTTAATATATGCAATTTTTTCATCTACAGAAACATAGTTTCTATCTTCTCTTTTTCTTTT

Coding sequence (CDS)

ATGGCAGCCTTTTCATATCAATACCAACCATTTCTTCTTGACTCTATTTTCTTGCACAATAACAATCCTCTTAAAATGGGAGGCTTTTTTGATGAACAGAATTTCAACACCAATTGTTTCTCCCCATTTTACCCTCAAGATCATCAACCACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAAGAACAACCCATTTACCATTTTCCTGACCTCTCTAAACAAAGCCCTGAATCTTCAACTTTGGTGGACCGGTCGGACAGCGCTGAGCTGCCGGTTGGAGATCAGTTGAAGCCGGCTGTTACTGTTACCGTCACTTCCCCTTGTAGTAAGAAAAGAAAGAGTCGGAATAATTCCTCCGCCTCCTCCGCCCAGTCCAAGGGGAGTAATGATCAGAGCAACGGGAAAAAGGCGAAAAATAAAGGAGAAGTAGAAGAAGGGAAAGAAAGAGATCAAAAGGCCAAAAGTGGGAAGAAATTATTGGAGGAGAAGTTAAAAGATTCAGAAGATGGAGGTGCAACCACCGGTTACATTCATGTCAGAGCAAGAAGGGGCCAAGCCACTGATAGCCACAGTCTTGCTGAGAGGGTGAGAAGAGAGAAGATTAGTGAAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAGGTTACAGGGAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCTCTACAAAATCAAGTTGAGTTTCTCTCCATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTAGACGGTCTCATGATTCAACCAGAGACGACGTCGTTGAGTAGCATAACACCAACACTACCGGCGATGGCGCAATGCAGTGTCGTATCACAGCCGGCGTTGATCGAACGACGCCTCCGGCGACCCCATCTCCGGCAATCTCCACCGGGAATAATTTTCCCTTAA

Protein sequence

MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQQQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSSASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIERRLRRPHLRQSPPGIIFP

Homology

[Close]

BLAST of Cucsat.G14278 vs. ExPASy Swiss-Prot
Match: Q93W88 (Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-38
Identity = 110/241 (45.64%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 66  IYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSSASSAQ 125
           +Y  P++S    + S L    D  E    ++L        T   S  + S   S+ +   
Sbjct: 38  LYPLPNISTVE-DISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAIT--- 97

Query: 126 SKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRG 185
              +  ++ G+KA+N    +EG E       G+K  ++K    E+    T YIHVRARRG
Sbjct: 98  ---NTGKTRGRKARNSNNSKEGVE-------GRKSKKQKRGSKEE--PPTDYIHVRARRG 157

Query: 186 QATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 245
           QATDSHSLAERVRREKISERM+TLQ LVPGCDKVTGKALMLDEIINYVQ+LQ QVEFLSM
Sbjct: 158 QATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 217

Query: 246 KLASLNPIFFDFRMDLDGLMIQPE----------TTSLSSITPTLPAMAQCSVVSQPALI 297
           KL S++P+ +DF  DLDGL++Q E          T ++ + TP  P++   SVV   A +
Sbjct: 218 KLTSISPVVYDFGSDLDGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSVVPTHAQV 262

[Close]

BLAST of Cucsat.G14278 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.9e-30
Identity = 94/185 (50.81%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 106 TSPCSKKRK---SRNNSSASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLE 165
           TS  +KKRK    +N+ +A S +S+ S ++ +    + + + +      +K+ SGK+  +
Sbjct: 231 TSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGK 290

Query: 166 EKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGK 225
           +     +D     GYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGK
Sbjct: 291 QSSDPPKD-----GYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 350

Query: 226 ALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGLMIQPE---TTSLSSITPT 285
           A+MLDEIINYVQSLQ QVEFLSMKLA++NP       +L+GL+ +         SS TP 
Sbjct: 351 AVMLDEIINYVQSLQRQVEFLSMKLATVNP---QMDFNLEGLLAKDALQLRAGSSSTTPF 407

[Close]

BLAST of Cucsat.G14278 vs. ExPASy Swiss-Prot
Match: Q6NKN9 (Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-30
Identity = 83/150 (55.33%), Postives = 105/150 (70.00%), Query Frame = 0


Query: 140 NKGEVEEGKERDQKA--KSGKKLLEEKLKDS-------EDGGATTGYIHVRARRGQATDS 199
           NK  VEE +E  Q+   +S KK   ++ K++        +      YIH+RARRGQAT+S
Sbjct: 157 NKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNS 216

Query: 200 HSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASL 259
           HSLAERVRREKISERM+ LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA++
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 276

Query: 260 NPIFFDFRMDLDGLMIQPETTSLSSITPTL 281
           NP   +  +D+D ++ +    S    TPTL
Sbjct: 277 NP---EINIDIDRILAKDLLQSRDRNTPTL 303

[Close]

BLAST of Cucsat.G14278 vs. ExPASy Swiss-Prot
Match: Q9LK48 (Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 100/199 (50.25%), Postives = 124/199 (62.31%), Query Frame = 0


Query: 103 VTVTSPCSKKRKSRNNSSASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQ----KAKSGK 162
           V  T   S+KRKS  + +   + +  S   SN K +   G  + GK   Q     +K+G 
Sbjct: 107 VHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGV 166

Query: 163 KLLEEKLKDSEDG---GATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPG 222
           +  + K  + +D     A   YIHVRARRGQATDSHSLAER RREKISERM  LQ LVPG
Sbjct: 167 EKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPG 226

Query: 223 CDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNP-IFFDFRMDLDGLMIQPETTSLS 282
           C+++TGKA+MLDEIINYVQSLQ QVEFLSMKLA++NP + F+    L   MIQP      
Sbjct: 227 CNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPG----E 286

Query: 283 SITPTLPAMAQCSVVSQPA 294
           S+T +L AMA CS    P+
Sbjct: 287 SLTQSLYAMA-CSEQRLPS 300

[Close]

BLAST of Cucsat.G14278 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.1e-29
Identity = 92/186 (49.46%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 81  TLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNN--SSASSAQSKGSNDQSNGKKA 140
           T V  + + +  V  ++ P    +       K KS+ N  S+AS + S     + NG K 
Sbjct: 196 TRVSSTPALKALVSPEVTPGGEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKG 255

Query: 141 KNKGEVEEGKERDQKAKSGKKLLEE----KLKDSEDGGATTGYIHVRARRGQATDSHSLA 200
            +K   E+G +R ++ +  ++   E    K  +++       YIHVRARRGQATDSHSLA
Sbjct: 256 GSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLA 315

Query: 201 ERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIF 260
           ERVRREKI ERMK LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+S+N   
Sbjct: 316 ERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTR 375

[Close]

BLAST of Cucsat.G14278 vs. NCBI nr
Match: XP_004154003.1 (transcription factor bHLH137 [Cucumis sativus] >KGN64437.1 hypothetical protein Csa_013788 [Cucumis sativus])

HSP 1 Score: 551 bits (1419), Expect = 1.72e-195
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120
           QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS
Sbjct: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120

Query: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180
           ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV
Sbjct: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180

Query: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240
           RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240

Query: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALI+
Sbjct: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALID 296

[Close]

BLAST of Cucsat.G14278 vs. NCBI nr
Match: XP_008440060.1 (PREDICTED: transcription factor bHLH137 [Cucumis melo])

HSP 1 Score: 488 bits (1255), Expect = 1.37e-170
Identity = 273/298 (91.61%), Postives = 282/298 (94.63%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFLHNN PLK+GGFFDEQNFNTNCFS FYPQD QPQQQQQQQQQQ
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNN-PLKVGGFFDEQNFNTNCFSQFYPQD-QPQQQQQQQQQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSD-SAELPVGDQLKPAVTVTVTSPCSKKRKSRNNS 120
               PIYHFPDLSKQSPESS LVDRSD SAELPVG +LKPAVTVTVTSPCSKKRKSRNNS
Sbjct: 61  ----PIYHFPDLSKQSPESSALVDRSDVSAELPVGHRLKPAVTVTVTSPCSKKRKSRNNS 120

Query: 121 SASSAQSKGSND-QSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYI 180
           SASSAQSKG+ D QSNGKK KNKGE++EGKE+DQKAK+GKKLLEEK+KDSEDGGATTGYI
Sbjct: 121 SASSAQSKGTTDHQSNGKKPKNKGELDEGKEKDQKAKNGKKLLEEKIKDSEDGGATTGYI 180

Query: 181 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240
           HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN
Sbjct: 181 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240

Query: 241 QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVV   ALI+
Sbjct: 241 QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVPPQALID 292

[Close]

BLAST of Cucsat.G14278 vs. NCBI nr
Match: KAA0055353.1 (transcription factor bHLH137 [Cucumis melo var. makuwa] >TYJ99279.1 transcription factor bHLH137 [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1177), Expect = 7.02e-159
Identity = 262/298 (87.92%), Postives = 272/298 (91.28%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFLHNN PLK+GGFFDEQNFNTNCFS FYPQD QPQQQQQQQQQQ
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNN-PLKVGGFFDEQNFNTNCFSQFYPQD-QPQQQQQQQQQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSD-SAELPVGDQLKPAVTVTVTSPCSKKRKSRNNS 120
               PIYHFPDLSKQSPESS LVDRSD SAELPVG +LKPAVTVTVTSPCSKKRKSRNNS
Sbjct: 61  ----PIYHFPDLSKQSPESSALVDRSDVSAELPVGHRLKPAVTVTVTSPCSKKRKSRNNS 120

Query: 121 SASSAQSKGSND-QSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYI 180
           SASSAQSKG+ D QSNGKK KNKGE++EGKE+DQKAK+GKKLLEEK+KDSEDGGATTGYI
Sbjct: 121 SASSAQSKGTTDHQSNGKKPKNKGELDEGKEKDQKAKNGKKLLEEKIKDSEDGGATTGYI 180

Query: 181 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240
           HVRARRGQATDSH        +KISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN
Sbjct: 181 HVRARRGQATDSH--------KKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240

Query: 241 QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           Q  FLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVV   ALI+
Sbjct: 241 Q--FLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVPPQALID 282

[Close]

BLAST of Cucsat.G14278 vs. NCBI nr
Match: XP_038893844.1 (transcription factor bHLH137-like [Benincasa hispida])

HSP 1 Score: 452 bits (1163), Expect = 7.92e-157
Identity = 251/296 (84.80%), Postives = 265/296 (89.53%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFL NN PLKMGGFFD+QNFN NCFS FY QD             
Sbjct: 1   MAAFSYQYQPFLLDSIFLPNN-PLKMGGFFDDQNFNNNCFSQFYSQD------------- 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120
            Q+QPIYHFPDLSKQSPESSTLVDRSDSAE PVG+QLKPAVTVTVTSPCSKKRKSRNNSS
Sbjct: 61  -QQQPIYHFPDLSKQSPESSTLVDRSDSAEPPVGNQLKPAVTVTVTSPCSKKRKSRNNSS 120

Query: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180
           A+SAQSKG+ + S GKK KNKGE++EGKE+DQK K+GKKL E+K+  SEDGGATTGYIHV
Sbjct: 121 ATSAQSKGTTE-STGKKQKNKGELDEGKEKDQKPKNGKKLEEKKI--SEDGGATTGYIHV 180

Query: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240
           RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240

Query: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITP LPAMAQCSVV  PA+I+
Sbjct: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPQLPAMAQCSVVPPPAMID 278

[Close]

BLAST of Cucsat.G14278 vs. NCBI nr
Match: KAG6573149.1 (Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378 bits (970), Expect = 1.07e-127
Identity = 223/297 (75.08%), Postives = 243/297 (81.82%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSI L  NNPLKMGGF DE NFN NCF+ F+ Q+H+           
Sbjct: 1   MAAFSYQYQPFLLDSI-LQANNPLKMGGFLDEPNFNINCFTQFFAQEHE----------- 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSR-NNS 120
            QEQPI+ FP+L KQSPES +LV++SDS E PV  QLKPAVT    SPCSKKRKSR NNS
Sbjct: 61  -QEQPIHRFPELCKQSPESFSLVEKSDSGEPPVVSQLKPAVT----SPCSKKRKSRGNNS 120

Query: 121 SASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIH 180
           SASSAQSK    +S GKK K K E++E KE D+K K+GKK   E+ K SEDG A TGYIH
Sbjct: 121 SASSAQSK----ESIGKKVKTKRELDERKEGDEKGKTGKK---EEKKGSEDG-APTGYIH 180

Query: 181 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 240
           VRA+RGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ
Sbjct: 181 VRAKRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 240

Query: 241 VEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           VEFLSMKLASLNPI FDFRMDLDGLMIQPE++SLSSITP LPAMAQCSV+S P LI+
Sbjct: 241 VEFLSMKLASLNPILFDFRMDLDGLMIQPESSSLSSITPQLPAMAQCSVISPPTLID 272

[Close]

BLAST of Cucsat.G14278 vs. ExPASy TrEMBL
Match: A0A0A0LUH5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051740 PE=4 SV=1)

HSP 1 Score: 551 bits (1419), Expect = 8.32e-196
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120
           QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS
Sbjct: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120

Query: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180
           ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV
Sbjct: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180

Query: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240
           RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240

Query: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALI+
Sbjct: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALID 296

[Close]

BLAST of Cucsat.G14278 vs. ExPASy TrEMBL
Match: A0A1S3B0V0 (transcription factor bHLH137 OS=Cucumis melo OX=3656 GN=LOC103484648 PE=4 SV=1)

HSP 1 Score: 488 bits (1255), Expect = 6.61e-171
Identity = 273/298 (91.61%), Postives = 282/298 (94.63%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFLHNN PLK+GGFFDEQNFNTNCFS FYPQD QPQQQQQQQQQQ
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNN-PLKVGGFFDEQNFNTNCFSQFYPQD-QPQQQQQQQQQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSD-SAELPVGDQLKPAVTVTVTSPCSKKRKSRNNS 120
               PIYHFPDLSKQSPESS LVDRSD SAELPVG +LKPAVTVTVTSPCSKKRKSRNNS
Sbjct: 61  ----PIYHFPDLSKQSPESSALVDRSDVSAELPVGHRLKPAVTVTVTSPCSKKRKSRNNS 120

Query: 121 SASSAQSKGSND-QSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYI 180
           SASSAQSKG+ D QSNGKK KNKGE++EGKE+DQKAK+GKKLLEEK+KDSEDGGATTGYI
Sbjct: 121 SASSAQSKGTTDHQSNGKKPKNKGELDEGKEKDQKAKNGKKLLEEKIKDSEDGGATTGYI 180

Query: 181 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240
           HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN
Sbjct: 181 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240

Query: 241 QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVV   ALI+
Sbjct: 241 QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVPPQALID 292

[Close]

BLAST of Cucsat.G14278 vs. ExPASy TrEMBL
Match: A0A5D3BK19 (Transcription factor bHLH137 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004920 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 3.40e-159
Identity = 262/298 (87.92%), Postives = 272/298 (91.28%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSIFLHNN PLK+GGFFDEQNFNTNCFS FYPQD QPQQQQQQQQQQ
Sbjct: 1   MAAFSYQYQPFLLDSIFLHNN-PLKVGGFFDEQNFNTNCFSQFYPQD-QPQQQQQQQQQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSD-SAELPVGDQLKPAVTVTVTSPCSKKRKSRNNS 120
               PIYHFPDLSKQSPESS LVDRSD SAELPVG +LKPAVTVTVTSPCSKKRKSRNNS
Sbjct: 61  ----PIYHFPDLSKQSPESSALVDRSDVSAELPVGHRLKPAVTVTVTSPCSKKRKSRNNS 120

Query: 121 SASSAQSKGSND-QSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYI 180
           SASSAQSKG+ D QSNGKK KNKGE++EGKE+DQKAK+GKKLLEEK+KDSEDGGATTGYI
Sbjct: 121 SASSAQSKGTTDHQSNGKKPKNKGELDEGKEKDQKAKNGKKLLEEKIKDSEDGGATTGYI 180

Query: 181 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240
           HVRARRGQATDSH        +KISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN
Sbjct: 181 HVRARRGQATDSH--------KKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 240

Query: 241 QVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           Q  FLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVV   ALI+
Sbjct: 241 Q--FLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVPPQALID 282

[Close]

BLAST of Cucsat.G14278 vs. ExPASy TrEMBL
Match: A0A6J1EBD0 (transcription factor bHLH137-like OS=Cucurbita moschata OX=3662 GN=LOC111431622 PE=4 SV=1)

HSP 1 Score: 375 bits (963), Expect = 5.42e-127
Identity = 218/287 (75.96%), Postives = 235/287 (81.88%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQP LLDS+F  NN+  KMGGF D+ NFNTNCF  F             Q+QQ
Sbjct: 1   MAAFSYQYQPVLLDSMFFPNNS-YKMGGFLDDPNFNTNCFLQF-------------QEQQ 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSRNNSS 120
           QQ+QPIYHFPD+S Q+PESSTLVDRSDSA+        PAVTVTVTSPCSKKRKSRN SS
Sbjct: 61  QQQQPIYHFPDISNQTPESSTLVDRSDSAD-------PPAVTVTVTSPCSKKRKSRNTSS 120

Query: 121 ASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHV 180
           A+SAQSKG+ + S GKK K+KGE++E KE D K K+GKK    + K   DG AT GYIHV
Sbjct: 121 ATSAQSKGTTE-STGKKQKSKGELDEHKEGDPKPKNGKK----EEKKVSDGAATKGYIHV 180

Query: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240
           RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240

Query: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCS 287
           EFLSMKLASLNPIFFDFRMDLDGLMIQPET SLS+ITP LPAMAQCS
Sbjct: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETPSLSTITPQLPAMAQCS 261

[Close]

BLAST of Cucsat.G14278 vs. ExPASy TrEMBL
Match: A0A6J1GUN8 (transcription factor bHLH137-like OS=Cucurbita moschata OX=3662 GN=LOC111457272 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 6.70e-125
Identity = 221/297 (74.41%), Postives = 240/297 (80.81%), Query Frame = 0


Query: 1   MAAFSYQYQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQQQ 60
           MAAFSYQYQPFLLDSI L  NNPLKM GF DE NFN NCF+ F+ Q+            Q
Sbjct: 1   MAAFSYQYQPFLLDSI-LQANNPLKMDGFLDEPNFNINCFTQFFAQE------------Q 60

Query: 61  QQEQPIYHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCSKKRKSR-NNS 120
           +QEQPI+ FPDL KQSPES +LV++SDS E PV  Q KP    TVTSPCSKKRKSR NNS
Sbjct: 61  EQEQPIHRFPDLCKQSPESFSLVEKSDSGEPPVVSQSKP----TVTSPCSKKRKSRGNNS 120

Query: 121 SASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIH 180
           SA SAQSK    +S GKK K K E++E KE D+K K+GKK   E+ K SEDG A TGYIH
Sbjct: 121 SAISAQSK----ESIGKKVKTKRELDERKEGDEKGKTGKK---EEKKASEDG-APTGYIH 180

Query: 181 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 240
           VRA+RGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ
Sbjct: 181 VRAKRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 240

Query: 241 VEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQCSVVSQPALIE 296
           VEFLSMKLASLNPI FDFRMDLDGLMIQPE++SLSSITP LPAMAQCSV+S P LI+
Sbjct: 241 VEFLSMKLASLNPILFDFRMDLDGLMIQPESSSLSSITPQLPAMAQCSVISPPTLID 272

The following BLAST results are available for this feature:

BLAST of Cucsat.G14278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W88	8.3e-38	45.64	Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=...	[more]
Q9CAA9	2.9e-30	50.81	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q6NKN9	3.7e-30	55.33	Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1	[more]
Q9LK48	1.1e-29	50.25	Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1	[more]
Q9FJL4	4.1e-29	49.46	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]

BLAST of Cucsat.G14278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154003.1	1.72e-195	99.66	transcription factor bHLH137 [Cucumis sativus] >KGN64437.1 hypothetical protein ...	[more]
XP_008440060.1	1.37e-170	91.61	PREDICTED: transcription factor bHLH137 [Cucumis melo]	[more]
KAA0055353.1	7.02e-159	87.92	transcription factor bHLH137 [Cucumis melo var. makuwa] >TYJ99279.1 transcriptio...	[more]
XP_038893844.1	7.92e-157	84.80	transcription factor bHLH137-like [Benincasa hispida]	[more]
KAG6573149.1	1.07e-127	75.08	Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma...	[more]

BLAST of Cucsat.G14278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUH5	8.32e-196	99.66	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051740 PE=4 S...	[more]
A0A1S3B0V0	6.61e-171	91.61	transcription factor bHLH137 OS=Cucumis melo OX=3656 GN=LOC103484648 PE=4 SV=1	[more]
A0A5D3BK19	3.40e-159	87.92	Transcription factor bHLH137 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1EBD0	5.42e-127	75.96	transcription factor bHLH137-like OS=Cucurbita moschata OX=3662 GN=LOC111431622 ...	[more]
A0A6J1GUN8	6.70e-125	74.41	transcription factor bHLH137-like OS=Cucurbita moschata OX=3662 GN=LOC111457272 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 192..242 e-value: 9.7E-11 score: 51.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 190..237 e-value: 4.6E-7 score: 29.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 186..236 score: 15.992762
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 183..253 e-value: 2.9E-15 score: 58.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 184..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..133
None	No IPR available	PANTHER	PTHR12565:SF359	BASIC HELIX LOOP HELIX PROTEIN BHLH8	coord: 1..268
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 176..261 e-value: 2.61946E-58 score: 178.79
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 33..81
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G14278.T1	Cucsat.G14278.T1	mRNA
Cucsat.G14278.T3	Cucsat.G14278.T3	mRNA
Cucsat.G14278.T4	Cucsat.G14278.T4	mRNA
Cucsat.G14278.T5	Cucsat.G14278.T5	mRNA
Cucsat.G14278.T6	Cucsat.G14278.T6	mRNA
Cucsat.G14278.T2	Cucsat.G14278.T2	mRNA
Cucsat.G14278.T7	Cucsat.G14278.T7	mRNA
Cucsat.G14278.T8	Cucsat.G14278.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity