Cucsat.G14161 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14161
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Rib s in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Locationctg1869: 3552227 .. 3554115 (-)
RNA-Seq ExpressionCucsat.G14161
SyntenyCucsat.G14161
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATCATAAACCCTCAGAAAATGGGTCTAAACCCTAAAACTGTAAAGAAACGCCATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGGTAAATTAGTATTCAATTTGAAAATCATTTCTCAAATTTGGGCACTGTGGACTATACTCTCCAGGAATTTCTAAGCATGAGTCATCGCCTTCTATCATATTTTATTGGTATAGCTCATAATTGTGGGATTTCAAGTTCAGAGATCTTTTTTTTTACTTTCAAATTGTGTCTTCATTTCATGAGATGGTTCTTCGTAATTTTACAGTTGGTCGGATAATTGCCATGTTTTTTTTTGCCTTACTTAAGATTATTGTACATTTTTTTGTCATTCTGTTGAAAACTGATATGAAGAGGTATATTTTTTCCAGTTTAATTGTTTGAGTTCTTGAGTTGATGTTAGTTTAGCACCATAGTTGACTATAAAATCTTGGATTTATATCCTCTTCTCACGTGTAGGTTGTTTAATTCTGGAAATTTTAGAATAGATGTGTTAAGAAGCGTTTGTTGAAGAAAGTACTTTTAATCAAGAGACTTCCGTTATAAGTAACCGGAAAAGTAGTGAAATGAAAGTTGATTTTGTTTGTTGGTTGTTGGTTCTGTATATTGGAAGTTCTTTTAATTAAATTAGAGATAGGTTTTGAATGAATATTTTGAGAAAGATGTGAGAATAATTAGAATTACAAAGCAATTAAGTGAGGAAAATAGAGATCAATGAGAGAAAGCAAAAGAGCTCAGAAAAATAGAAGGGAAATCTGGAAAAGAAAGTGAGTAGAAAGAGTTTAGTGCAAAGAGATATTAAGAAAAAGGTGTTCACAGAGAAATGTTAATGAAAGAGTTTGTATTTTGAGAAATGAAGGATAATGTATTTTAGTCAAAGATACTTGATAGAACATCTATGATCTACCATTCACTTGTTCAAAAAATACGACTGATCTTAGTGAAATTAACCATTTAAATAGTACTTCTGTTAAAAGATGTGTAAAGTTCTTGTTATTTCTGGATCAATTTTTGGTAGTATGATTAATTTTTGTTTTTGAGCTTCTTCATTTGGTGTTCCTTTTCTGGAATCTTAGACTTATGATTTAGAAGCTAATACAGAAATGATTTATCTGTGAATTCAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAAGATAATGCGAAGCTTATAGTTTATGATGATGTTAGATTATTTTACGTTTTAAGTGAATTCTATCCCCCAACTTTTACTTACTTCAATTCAATTGGATGGAGTGGGCTTTAGGATTATTATTTCAAATCTTTTGTCATATAAATGTACAATTATTCACTTGGGTTTAGCACAACATTGCCATTGTATGAGATAATAATGGATTTGGTACGAAAAGAAAAAAGTTCTGTCAAGAATGGGATTCGAACCCATGCCCTTTCGGACCAGTACCTGAAACTGGCGCCTTAGACCAACTCGGCCATCTTGACT

Coding sequence (CDS)

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Protein sequence

MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Homology
BLAST of Cucsat.G14161 vs. NCBI nr
Match: XP_004137486.1 (uncharacterized protein LOC101216147 [Cucumis sativus] >KGN64149.1 hypothetical protein Csa_014199 [Cucumis sativus])

HSP 1 Score: 294 bits (753), Expect = 3.65e-100
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

BLAST of Cucsat.G14161 vs. NCBI nr
Match: XP_008461340.1 (PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo] >TYJ99013.1 uncharacterized protein E5676_scaffold248G002170 [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 4.98e-81
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155
           GE+EDFKGEE YDS+L DD    A+ DSEEED+RI
Sbjct: 121 GEIEDFKGEE-YDSELTDD----AASDSEEEDKRI 150

BLAST of Cucsat.G14161 vs. NCBI nr
Match: XP_038894045.1 (uncharacterized protein LOC120082798 [Benincasa hispida])

HSP 1 Score: 208 bits (530), Expect = 4.12e-66
Identity = 122/163 (74.85%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRAL GAVF+VYS TLSVSPPLRTFRS  LLSPFS  +LR YSSGNDKYN LNSTKNKD
Sbjct: 1   MKRALLGAVFNVYSRTLSVSPPLRTFRSGLLLSPFSFFSLRYYSSGNDKYNGLNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SL++DDVSTEELKRKIDKFYEG D +SLP IFEAILKRKLSGKHED D E+MKEIRQ++P
Sbjct: 61  SLIEDDVSTEELKRKIDKFYEG-DVESLPTIFEAILKRKLSGKHEDDDHEMMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMD--------DDSSDASDDSEEEDRRI 155
           G+VED  GEE YDSDL +        +D SD+SD SE+EDRR+
Sbjct: 121 GQVEDSTGEE-YDSDLSELNETAEEMEDFSDSSD-SEDEDRRV 160

BLAST of Cucsat.G14161 vs. NCBI nr
Match: XP_023519890.1 (uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (484), Expect = 4.39e-59
Identity = 116/164 (70.73%), Postives = 129/164 (78.66%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTL---RRYSSGNDKYNELNST- 60
           MKRA+WGAVF V S  +S+SP L+T RS PLL PFSVS     R YS+GNDKYN LNST 
Sbjct: 1   MKRAIWGAVFTVCSRRVSISPLLQTLRSGPLLPPFSVSIASQSRCYSTGNDKYNGLNSTT 60

Query: 61  -KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLVDDDVS EELKRKID+FYEG D +SLP IFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEG-DVESLPTIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFKGEEEYDSDLMDD----DSSDASDDSEEEDRRI 155
           RQ++PGEVEDFK +EEYDSDL  +    D     D SEEEDRR+
Sbjct: 121 RQRMPGEVEDFK-DEEYDSDLSGELNETDEEMEEDPSEEEDRRV 162

BLAST of Cucsat.G14161 vs. NCBI nr
Match: KAG6584340.1 (hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (479), Expect = 2.53e-58
Identity = 115/164 (70.12%), Postives = 128/164 (78.05%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTL---RRYSSGNDKYNELNST- 60
           MKRA+WGAVF   S  +S+SP L+T RS PLL  FSVS     R YSSGNDKYN LNST 
Sbjct: 1   MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTS 60

Query: 61  -KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLVDDD+S EELKRKID+FYEG D +SLPAIFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDDISNEELKRKIDRFYEG-DVESLPAIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI 155
           RQ++PGEVEDFK +EEYDSDL     + D     D SEEEDRR+
Sbjct: 121 RQRMPGEVEDFK-DEEYDSDLSGELNESDEEMKEDSSEEEDRRV 162

BLAST of Cucsat.G14161 vs. ExPASy TrEMBL
Match: A0A0A0LT17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042590 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.77e-100
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

BLAST of Cucsat.G14161 vs. ExPASy TrEMBL
Match: A0A5D3BIA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002170 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 2.41e-81
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155
           GE+EDFKGEE YDS+L DD    A+ DSEEED+RI
Sbjct: 121 GEIEDFKGEE-YDSELTDD----AASDSEEEDKRI 150

BLAST of Cucsat.G14161 vs. ExPASy TrEMBL
Match: A0A1S3CEX3 (uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 2.41e-81
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155
           GE+EDFKGEE YDS+L DD    A+ DSEEED+RI
Sbjct: 121 GEIEDFKGEE-YDSELTDD----AASDSEEEDKRI 150

BLAST of Cucsat.G14161 vs. ExPASy TrEMBL
Match: A0A6J1E804 (uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC111431572 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 4.97e-58
Identity = 115/164 (70.12%), Postives = 127/164 (77.44%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTL---RRYSSGNDKYNELNST- 60
           MKRA+WGAVF   S  +S+SP L+T RS PLL  FSVS     R YSSGNDKYN LNST 
Sbjct: 1   MKRAIWGAVFTACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  -KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLVDDDVS EELKRKID+FYEG D +SLP IFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEG-DVESLPTIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI 155
           RQ++PGEVEDFK +EEYDSDL     + D     D SEEEDRR+
Sbjct: 121 RQRVPGEVEDFK-DEEYDSDLSGELNESDEEMKEDSSEEEDRRV 162

BLAST of Cucsat.G14161 vs. ExPASy TrEMBL
Match: A0A6J1KP40 (uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 2.54e-55
Identity = 113/162 (69.75%), Postives = 123/162 (75.93%), Query Frame = 0

Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTL---RRYSSGNDKYNELNST- 60
           MKRA+WGAVF   S  +S+ P L+T RS PLL PFSVS     R YSSGNDKYN LNST 
Sbjct: 1   MKRAIWGAVFAACSRRVSIPPLLQTLRSGPLLPPFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  -KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLVDD VS EELKRKID+FYEG D +SLP IFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDYVSNEELKRKIDRFYEG-DVESLPTIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFKGEEEYDSDLMDD----DSSDASDDSEEEDR 153
            Q++PGEVEDFK +EEYDSDL  D    D     D SEEEDR
Sbjct: 121 LQRMPGEVEDFK-DEEYDSDLSGDLNETDEEMEEDSSEEEDR 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_004137486.13.65e-100100.00uncharacterized protein LOC101216147 [Cucumis sativus] >KGN64149.1 hypothetical ... [more]
XP_008461340.14.98e-8187.10PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo] >TYJ99013.1 uncha... [more]
XP_038894045.14.12e-6674.85uncharacterized protein LOC120082798 [Benincasa hispida][more]
XP_023519890.14.39e-5970.73uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo][more]
KAG6584340.12.53e-5870.12hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0LT171.77e-100100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042590 PE=4 SV=1[more]
A0A5D3BIA42.41e-8187.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEX32.41e-8187.10uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=... [more]
A0A6J1E8044.97e-5870.12uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC1114315... [more]
A0A6J1KP402.54e-5569.75uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14161.T1Cucsat.G14161.T1mRNA