Cucsat.G14102 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTATTTGTTTGGAAATTATTTCCGACAAAAGGGTGGCTGGGAAAATTGAGGCTTTTTTTTCTTTCTTTTTTTTATCGTATATATTTTCATCGGTGGATGTGTGGAATTAAATCTAATGTAGAAAGAACACTACGGGCATGTGGTTGTTTCTCGAAATGTTTGGTCAATTGTAAGAAGAAATGATGACGAATTGAAGCCATTACCTTAATTCCAACGCAAATATCTTCTTCTTCTTCTTCTTCTTCTTCCATCCTTCAATCAATCACAAGCAGCTCTGTTCCATTTGCATCATCAGAGATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGGTATGCCCATTTCTACACTCTTCAATTGCTTTCGCTCTTTTCTATTATATTTGCTTCTTATGTCTCTTCTCCGATGTTTTCGATTTTCTTCTTTGATTCTATTGAAGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGTATCCCATTAACTCGTACATCAAAAACCCTTCCTGGGTTTTGGCTGTTGTGTTCATTCGCTTAGTTTCTTCCTGGATTAAGGTCTTGATTTCTAAGTATGTTCAAAATATGGAGGATTCGATTAATTTCCCATTGTATTCCCATAGCACTTAAAAGACTGATTATCTTCAAGTAGAATTACAAATTTGGTCTACAAGTGCGAGTTGGGATAGATGGATGCATGAATCTAAATTTTTTTCTAGTCATGTCATGTTCAAAGTATTAGAACTATGTCGGACAGTTGAGTCAGCTTTTTTGATCTGCCAATAATAACCTCGAACTAACTTCAAAGGAGAAAAATTATATCCCCTTTATGATCTGGAAGGTTATTTGTTCAGTAAATTGCATAAAGATGTTTATCATTTGTAAACTTCAAGCAATAGAGAACTTCGGCGGGGAGTAATGCAACTTGCAATGGAAATTTTGGCAATTTAGTATTTTCTAACTAGAGGATATCTTTAATTTGCTTCACTTTCACAAATCCTTTAAAGTTTGAAACCATGTTCTTCACATTTATGAATCTATATTGGTTACCTTGTAGAACCAAAATTCTAGAGGAAGAAGTTAATAAGACAGTTGTTGGATTGGTTTCTTTGTTTCCTTCTACCTCAGTGACAGAGCATTCACAGATTAATCCAAAAGGTGTACGCCACTCTAGCTACTTATCTCCGAGAAAAAACCTCCTCTTATAAAGTTCTACCTGATTCATAATTTCATACCATACAAAAGACTGGAACTAAACTCATTTCACCGTACACCGGCCCCTGCTCAGATTTTCCCCTCAATTGTGTCGCTACACTGCTTGGTTGTTATTCAAATTCTTTCCATCCATGTCTCTAAGTAGGAAATGTTCCAATGGATTCCCTCTAGATTGATGAGTCCTGTTCTGGCTGAAAGAATCCAGTATTGGTGCTTCAACACATTTAGTTCGCTGATTCTTGCCTTGTTATTTAGTAAGATTGAAAGTTGCTAGAAAGCTTACTGTATTAACATCTCATCTCTAAGGCTCGTCGTTGTCACCATGGTGCACTCACTTTCACACTCTGGTATCTTTTAACTAACTATTTGGCACCAGGTTCAGTTGTGAGGATACTAGATGTGTTTGGATAAAGTGCTTACACAATGCAAACAAGCCCATACTGTTGGTTGTTTTACAAAATTTTTACTGCTATAGAGACTGCTGAAATGAAAAGTAAAGACTGTTTACATTTCCATAGAATTGAATCAGTCCCAATCACTTGTTGAGACTGAATGTTTGAGTGTTTGTTGGTTTTTCATCATTTATAACTAAATAGGCAAGCCCAGTTCAAACTGTAACCGATGCATTAGGATTCTCTTTTGGCATGGTTCCTTCTGAACTATATAGAATTAGATGTTGAGGCTTCCAATAGCTGGGCCTGGGAGGTATGAATTCTTTAGATGAAAACACTCACTTTACCAACTCCAATTTTTCCATGTCTTTTTGTAGCTCATAATCAAACATATGATGTGAAAGTAAAGTAATTTGACTTGTTGTAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGATTGAATGATCCCATCATCAATGGATCTAACCTGCTATAGACAATCTTATTTGTTCCAATAATATAAACTGGAAAAGTGGGAATGAAATGATATTTGATTACTATTACCACACCTCCCTTGATTTCCCTTCGACCTCTTTTTTTCTAGTTTATATTTAGTTTTTAGTACTTTTTCGACTTCTAAATTTGTGGATTCCGATTAAATTATTTACAAAATAGTGTATTGCTAGAAATTGTGGTTAATTATATAAATTGAAGTTCCTAGTTGGTAGATCATAACTTTATAGTATAATAATGCAATACACGAGCTAAGTAGTAATAAAA ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGATTGAATGA MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE Homology
BLAST of Cucsat.G14102 vs. ExPASy Swiss-Prot
Match: Q9FZ89 (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.0e-18 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy Swiss-Prot
Match: P74786 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.0e-06 Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy Swiss-Prot
Match: Q8YQ06 (UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=asl4034 PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.3e-04 Identity = 21/65 (32.31%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of Cucsat.G14102 vs. NCBI nr
Match: XP_004137400.1 (UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]) HSP 1 Score: 249 bits (637), Expect = 2.38e-83 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of Cucsat.G14102 vs. NCBI nr
Match: XP_008439829.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1 UPF0426 protein [Cucumis melo var. makuwa] >TYJ98872.1 UPF0426 protein [Cucumis melo var. makuwa]) HSP 1 Score: 234 bits (598), Expect = 2.11e-77 Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Cucsat.G14102 vs. NCBI nr
Match: KGN63981.2 (hypothetical protein Csa_013804 [Cucumis sativus]) HSP 1 Score: 229 bits (583), Expect = 2.65e-73 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Cucsat.G14102 vs. NCBI nr
Match: XP_038893812.1 (UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]) HSP 1 Score: 224 bits (571), Expect = 2.76e-73 Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Cucsat.G14102 vs. NCBI nr
Match: XP_022924196.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]) HSP 1 Score: 200 bits (509), Expect = 7.83e-64 Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy TrEMBL
Match: A0A0A0LT92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1) HSP 1 Score: 249 bits (637), Expect = 1.15e-83 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy TrEMBL
Match: A0A5D3BGH6 (UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00680 PE=4 SV=1) HSP 1 Score: 234 bits (598), Expect = 1.02e-77 Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy TrEMBL
Match: A0A1S3AZP7 (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1) HSP 1 Score: 234 bits (598), Expect = 1.02e-77 Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy TrEMBL
Match: A0A6J1E8W6 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431718 PE=4 SV=1) HSP 1 Score: 200 bits (509), Expect = 3.79e-64 Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Cucsat.G14102 vs. ExPASy TrEMBL
Match: A0A6J1KGM3 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495083 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 1.80e-62 Identity = 101/128 (78.91%), Postives = 109/128 (85.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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