Cucsat.G14093 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14093
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionNascent polypeptide-associated complex subunit beta
Locationctg1869: 2571833 .. 2574612 (-)
RNA-Seq ExpressionCucsat.G14093
SyntenyCucsat.G14093
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATCATTAACAAATTAGCTCACCAATTATGGTTGAGCCCACCAAGGCCCATTGACATTTTTATTGTTTGATTTATCTGAAGTAATCTATGAACCGTTGGATCAAGATGTGTGTTTCTTTCCTTTCTTTTTTTGGTTTTGGTGGATCAGTTCGTAGCTTTAGCAACCTATTATTATATGGAGGGAAAGGGCGTATTAATCTGTTAGCGCCGTCCGGGAGTTTCGCTTTCTTCCGCGACCCTCAGTCTTATCCCCTAACTCCAAAACCCTAGCCCAAAGGTAATTCACTCCTTCCTCTTCGCTCTTCATCTCTTTCTATTCCTCGTCTTAAATCTGTTCTCCCCTTTGGTTCTTCGATTCTTCTTTTCTTGGACTCTTTTATTCTTTCCTCATGGTTGGCCTTGTAAGTTTAGACGATGTTTTTATAGATTGGTTTGTCCTGTTTCTCTATCTATTCGCATGCTAGGGTTTTCTTTTTGTTTTCTATTGTGCTCTACTTCTGCAAGGTTGTGTTCTTTTTTTCTTCTTCATTCGGGTCCCTTTTCTTAACCGATATTAAATTAATGCAAATTTGTTTGGGCTTCTAATTGGGAAGCCTTTTGGAATATCTCGACATTTTGATTGCTGCATTTCATTTTGGGTATATTTCTATGATTGAAGGATGTGGGTCTGTTCACTGCATGCTTATTACTTATGCAGCTATGCTTATTGAGTCTCAGTACGGTGGGTTTGTTTGTTTGTGCAATCTGTTTCCGGATTCATAATTTTTGAGCAGTAGATGAAAAATGATATTTGTAAAATTCCTTGAGTGTTGGTGGGTATCTGCTCCTGCTATTTGCTTTTGGATTTTACTTTTATTATATCTGGATTATTCGAAATGTTCTGTTCTTGTTATAACTTATACCCGAAGATGTGTTCCTCCCTGCATCCAGCTTTGTGGGTTACTTATGATGGACATGATTTAATTCTGTTTGGTGTTGTGCAGATGGATCAGGAGAGGCTTAGAAAGATTGCCAGTGCCGTTCGCACTGGTGGAAAGGGTACTGTGAGAAGGTAATTTGTAATATTTATTGCAACTCAGTTCTTGTCCATTCTATTGTTGATCATGGAAGGAGATGGCATGGATAACCTTCAAATTTGATGGATCATAAGAACTTTACAAAATTTCAACTTTGCAATGTGATAAGAAATTATGTGTCCTTGCTAATTTAAATTTATTTTTTACAAATACTAACTAAAATAGAAATAGTAGTAGGAATCTATTTTAAGCAATAAGTTATACCAAACTTCCATCTCAGTGTTTTTCTCTTACCTTGCTGATCTTTACATGATGACTTTTTAAAATTTAAAGTTTTTAAGTTTTACACAAGGTTATGCAATTATATCATCATCTTAGTTACCTTATGGTAACTGGCACTTGGCAAGTCTTCTTGTGTATTGTACTTGTTTATTTGTTTTTCATGTCATAATCTTTCTATTATCTCTCCAATGAAATTCGCTACAGACATTACCTTTATTCCATTTGTTGAATTCTTATTTTCAAACAATTGCCCTTGACAATAGAAAGAAGAAGGCAGTTCATAAGACCACTACAACTGATGACAAAAGGCTCCAGAGTACTTTAAAGAGAATTGGGGTGAATGCCATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCAACAACCCAAAGGGTAACTTTTCTTAGACAATGTATTGTACTTGATTTTTATTGGTTTACATTCTTGGATAGCTCTTAACTAATTTTGTAAAAAAAATAATTCTGTCCAGTTCAAGCATCTATTGCTGCAAACACGTGGGTCGTTAGTGGTTCTCCTCAAACAAAGAGTATGTATCTCTGCACCATGTTGTAAATCTTATAACACGATTGTCTTCTTTCCATTGCTTGAATATAATTTGACATACTGGACAACCATCGAAGGTCTTTGGGAGTAGTTATATACTTCTTTGAGAGAATGTTTTCTTGTTTTGGGCAATTGGATCGTGGCTATAGAAAAATAATGTTCTTCTATTTGTTTAAATTGTGAGATCTTGTTGGTTTTAAGTGGATTTTATTAGTTTTCATTGTAACTATTCATGGAACCTGCTATTCTTACCAACCTTCAATGGATTACCGTTAGAAATCATCTGGTTGTCTTTCATTCTAATTTTTATTTTGTTATTTCGAAATTCTAATTATTTGTACGTTTCCCAACTTCAGAATTGCAGGATATCTTGCCTGGTATCATCAATCAATTGGGTACGTTAGTTATCTCTCGAGTTATGTTTTATTGTTAGGAGCATTCCGTTGGTTTGAACTTCAAAATAATGCTTCTTGTTCTACTATCCTCAGGTCCAGATAACTTGGACAACTTGCGTAAATTGGCTGAACAGTTTAAACAGCAAGTACCTGGAGCTGGTGGTGATCCAAAGAATGCACAAGAGGAGGATGATGATGTTCCGGAACTTGTTGAGGGTGAGACTTTCGAAGCTCCCGCAGAAGAAAATCGTTCTTCTTAGATAGATCCTTTTGAAAGAGAGGAGTGTTGTTTTTATGCCGTTTTATACTTTCCTAGAGTTGCTTCAGACAAGTTTTTATGATTTCGATAATTCTTAATCTTATCATAATTTAACTTGTTCTCTTTATGAGATGAGGATCGGTACTTGTGTGTTTGTTCAATTCCCTGCCATACTCTTTAATCATCCCATCATCCCATCATCCTTTCATTCCTCCGGTAATACACAACAAAAGTTGCGGAGCTTAGCTTCTCCCTCATGACTTATGCTGTCCATTACTATTCTTGGTAATTCTTCTTGACGTTAAAATTATATATAAAAATTCGTAATTTACCAGTGCAATCCATCAATTATTCTTG

Coding sequence (CDS)

ATGGTTGGCCTTATGGATCAGGAGAGGCTTAGAAAGATTGCCAGTGCCGTTCGCACTGGTGGAAAGGGTACTGTGAGAAGAAAGAAGAAGGCAGTTCATAAGACCACTACAACTGATGACAAAAGGCTCCAGAGTACTTTAAAGAGAATTGGGGTGAATGCCATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCAACAACCCAAAGGTTCAAGCATCTATTGCTGCAAACACGTGGGTCGTTAGTGGTTCTCCTCAAACAAAGAAATTGCAGGATATCTTGCCTGGTATCATCAATCAATTGGGTCCAGATAACTTGGACAACTTGCGTAAATTGGCTGAACAGTTTAAACAGCAAGTACCTGGAGCTGGTGGTGATCCAAAGAATGCACAAGAGGAGGATGATGATGTTCCGGAACTTGTTGAGGGTGAGACTTTCGAAGCTCCCGCAGAAGAAAATCGTTCTTCTTAG

Protein sequence

MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFKQQVPGAGGDPKNAQEEDDDVPELVEGETFEAPAEENRSS
Homology
[Close]
BLAST of Cucsat.G14093 vs. ExPASy Swiss-Prot
Match: Q9CAT7 (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g73230 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-44
Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           M++E+L K+A+ VRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 110
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILP II+QLG
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLG 105

[Close]
BLAST of Cucsat.G14093 vs. ExPASy Swiss-Prot
Match: Q9SMW7 (Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-44
Identity = 93/105 (88.57%), Postives = 100/105 (95.24%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           M++E+L K+A+ VRTGGKGTVRRKKKAVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 110
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP II+QLG
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLG 105

[Close]
BLAST of Cucsat.G14093 vs. ExPASy Swiss-Prot
Match: Q6PC91 (Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 65/106 (61.32%), Postives = 86/106 (81.13%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           M+QE+L K+ + VR GGKGT RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMI 60

Query: 65  KDD-VVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 110
           KDD  VI FNNPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLG 106

[Close]
BLAST of Cucsat.G14093 vs. ExPASy Swiss-Prot
Match: Q4KLF5 (Transcription factor BTF3 homolog 4 OS=Xenopus laevis OX=8355 GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.9e-29
Identity = 63/106 (59.43%), Postives = 85/106 (80.19%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           M+QE+L K+ + VR GGKGT RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 65  KDD-VVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 110
           KDD  VI FNNPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLG 106

[Close]
BLAST of Cucsat.G14093 vs. ExPASy Swiss-Prot
Match: Q5M8V0 (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis OX=8364 GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.9e-29
Identity = 63/106 (59.43%), Postives = 85/106 (80.19%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           M+QE+L K+ + VR GGKGT RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 65  KDD-VVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 110
           KDD  VI FNNPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLG 106

[Close]
BLAST of Cucsat.G14093 vs. NCBI nr
Match: XP_004137393.1 (nascent polypeptide-associated complex subunit beta isoform X1 [Cucumis sativus])

HSP 1 Score: 206 bits (525), Expect = 6.47e-66
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60
           MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109

[Close]
BLAST of Cucsat.G14093 vs. NCBI nr
Match: XP_008438287.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucumis melo])

HSP 1 Score: 205 bits (522), Expect = 1.85e-65
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60
           MVGLMDQERLRKIASAVRTGGKGT+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109

[Close]
BLAST of Cucsat.G14093 vs. NCBI nr
Match: XP_004137394.1 (nascent polypeptide-associated complex subunit beta isoform X2 [Cucumis sativus] >KAE8652498.1 hypothetical protein Csa_014293 [Cucumis sativus])

HSP 1 Score: 199 bits (506), Expect = 4.45e-63
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 105

[Close]
BLAST of Cucsat.G14093 vs. NCBI nr
Match: XP_008438373.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucumis melo] >XP_008438455.1 PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucumis melo] >XP_038893518.1 nascent polypeptide-associated complex subunit beta-like [Benincasa hispida] >XP_038893519.1 nascent polypeptide-associated complex subunit beta-like [Benincasa hispida])

HSP 1 Score: 198 bits (503), Expect = 1.27e-62
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           MDQERLRKIASAVRTGGKGT+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 105

[Close]
BLAST of Cucsat.G14093 vs. NCBI nr
Match: XP_022923910.1 (nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata])

HSP 1 Score: 197 bits (500), Expect = 3.89e-62
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           KDDVVIQFNNPKVQASIAANTWVVSGSPQ KKLQDILPGIINQLG
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQIKKLQDILPGIINQLG 105

[Close]
BLAST of Cucsat.G14093 vs. ExPASy TrEMBL
Match: A0A0A0LPY4 (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus OX=3659 GN=Csa_1G031860 PE=3 SV=1)

HSP 1 Score: 206 bits (525), Expect = 3.13e-66
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60
           MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109

[Close]
BLAST of Cucsat.G14093 vs. ExPASy TrEMBL
Match: A0A1S3AWM8 (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103483414 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 8.97e-66
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60
           MVGLMDQERLRKIASAVRTGGKGT+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109

[Close]
BLAST of Cucsat.G14093 vs. ExPASy TrEMBL
Match: A0A1S3AX23 (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103483414 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 6.17e-63
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           MDQERLRKIASAVRTGGKGT+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 105

[Close]
BLAST of Cucsat.G14093 vs. ExPASy TrEMBL
Match: A0A6J1EDA5 (Nascent polypeptide-associated complex subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111431490 PE=3 SV=1)

HSP 1 Score: 197 bits (500), Expect = 1.88e-62
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           KDDVVIQFNNPKVQASIAANTWVVSGSPQ KKLQDILPGIINQLG
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQIKKLQDILPGIINQLG 105

[Close]
BLAST of Cucsat.G14093 vs. ExPASy TrEMBL
Match: A0A5A7SZH7 (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00560 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 4.48e-62
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 5   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 64
           MDQERLRKIASAVRTGGKGT+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 63  MDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 122

Query: 65  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 109
           KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG
Sbjct: 123 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 167

The following BLAST results are available for this feature:
BLAST of Cucsat.G14093 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CAT71.7e-4487.62Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3... [more]
Q9SMW72.3e-4488.57Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1[more]
Q6PC912.7e-2961.32Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1[more]
Q4KLF57.9e-2959.43Transcription factor BTF3 homolog 4 OS=Xenopus laevis OX=8355 GN=btf3l4 PE=2 SV=... [more]
Q5M8V07.9e-2959.43Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis OX=8364 GN=btf3l4 PE=2... [more]
BLAST of Cucsat.G14093 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137393.16.47e-66100.00nascent polypeptide-associated complex subunit beta isoform X1 [Cucumis sativus][more]
XP_008438287.11.85e-6599.08PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X1 [... [more]
XP_004137394.14.45e-63100.00nascent polypeptide-associated complex subunit beta isoform X2 [Cucumis sativus]... [more]
XP_008438373.11.27e-6299.05PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [... [more]
XP_022923910.13.89e-6299.05nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata][more]
BLAST of Cucsat.G14093 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPY43.13e-66100.00Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus OX=3659 G... [more]
A0A1S3AWM88.97e-6699.08Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=L... [more]
A0A1S3AX236.17e-6399.05Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=L... [more]
A0A6J1EDA51.88e-6299.05Nascent polypeptide-associated complex subunit beta OS=Cucurbita moschata OX=366... [more]
A0A5A7SZH74.48e-6299.05Nascent polypeptide-associated complex subunit beta OS=Cucumis melo var. makuwa ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002715Nascent polypeptide-associated complex NAC domainSMARTSM01407NAC_2coord: 36..91
e-value: 1.3E-22
score: 91.2
IPR002715Nascent polypeptide-associated complex NAC domainPFAMPF01849NACcoord: 36..91
e-value: 1.1E-20
score: 73.3
IPR002715Nascent polypeptide-associated complex NAC domainPROSITEPS51151NAC_ABcoord: 33..97
score: 15.480663
IPR038187NAC A/B domain superfamilyGENE3D2.20.70.30coord: 48..97
e-value: 1.2E-19
score: 71.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR10351:SF60NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETAcoord: 1..93
IPR039370Transcription factor BTF3PANTHERPTHR10351TRANSCRIPTION FACTOR BTF3 FAMILY MEMBERcoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14093.T4Cucsat.G14093.T4mRNA
Cucsat.G14093.T1Cucsat.G14093.T1mRNA
Cucsat.G14093.T9Cucsat.G14093.T9mRNA
Cucsat.G14093.T10Cucsat.G14093.T10mRNA
Cucsat.G14093.T11Cucsat.G14093.T11mRNA
Cucsat.G14093.T5Cucsat.G14093.T5mRNA
Cucsat.G14093.T6Cucsat.G14093.T6mRNA
Cucsat.G14093.T3Cucsat.G14093.T3mRNA
Cucsat.G14093.T2Cucsat.G14093.T2mRNA
Cucsat.G14093.T8Cucsat.G14093.T8mRNA
Cucsat.G14093.T13Cucsat.G14093.T13mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005829 cytosol
cellular_component GO:0005854 nascent polypeptide-associated complex
cellular_component GO:0042788 polysomal ribosome