Cucsat.G14092 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14092
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionSmall glutamine-rich tetratricopeptide repeat-containing protein beta
Locationctg1869: 2562064 .. 2569681 (-)
RNA-Seq ExpressionCucsat.G14092
SyntenyCucsat.G14092
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAACGTGGAGGGGCGCGCGCGCGCGCTGACAGTAATAAAAGCGAAAGAAAGAACTAAAACAAAAAAAATACCAAAAGCAAAGGGATAGAAAGGGGGAATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGTATTTTGTTCTGTGATATGATATTGATATTGTTCATGCGTAGTTTTTCACTCTTCGGTCTGAGAATTCTGTTCTGATCAATACATTATGTATGATGTCCTGCTTCAATTTGTTGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTCATAGTTCTATGTTCTATCATATTATATATAATCGTGTGCTATCTGTCCCCTCTTATACTAAGTTTGGTAACTATAATTGAACTTATGGCGGTAAACACTGACAATTATTGTTACTCGTCGATTTATCCTGCATGTTTCTAGCATTTGTATATTTCTGGACTTAAAAAATTGTTTGTAAATGTATTTGCTAAAGCAGATGCATCCAGAAAATATAGTTTCACAGAACTAGTAAATTTTCAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGTGAGAAGTATTTTATATATTCATTGTGTGCATTACATTTCATCTAAAAAAATTAGACGGTGGTTTCGAGAAAATAACTAGGCTGTTTACACTTCAACGAGTCTGGGTTGTGAATATAATCATTACTGAAGAGACATTGTTTGGAACTACCAACTGCGGAGAGTACCTCAATATTTTCTACAAGGTTTTTTACTTATATTCCTATCTCTTCCACTCCAAATGTTTTTAAGCAGATTTGCGTAGCACTAAACTTTAAGTGTCGACTAAAAGAAAATTTGGAGGTTAACAGGGAAATTTTGGACGTGAACAAAAATTATTATTCGGGGATCAATATTTTGTTAGGCTACCTGAGTCTTTGTGCTGCTTGAATCTTTACATGTTAATATTATAATTGAATGCTAAGAAACAGTAATTGCGGTGGACAAGGTTAAAGAAGAAAAAGGAAAATAAATAGAAATCTTAGTTGAAAAGTCAAAAGACTGATGATGCTCAACTCTAATTTAGAGGTCCTTCAAACATGCAACCAACTAGTAGAACATGCAATCCTTTTGAGACAATTACAAATTCTTATCCTTCAATTGAAAAGATGTGAGAAGAAATGATTCTTGCTCTAGAGTAGATTATCGTATTATTCCTGGGATGCATTTCTTAATTTCAATTTGCAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTTATATGAGCATACTATGGACAATTTCATCACTGGGACAAAAGAGACTCACTTTAACCAACTAATTTTCAGCATATTTGCTCCCCAACCAAGGATTTTATTTATTTATTTTATTAACTTTTGGTTTATAGGAAGCACCCAGAACCATATTTAAGATGGTTTACCATTGAAATGTTGGTTGGGATTGGCTGAAAGAATTTTGGAGCTATTTTCTGCTTTTGAGGACAAAATTCAATAATTTATTAATTAGCTTTAAAAAAACTGTTCTCAAAATGTTGTTGACACTAATGACCGGTTTGTACCCGAGAACAACTTACTTTCTTCTTATAATAACCGTAAACAAAACTGTTTCTGAAAACAGTTTCCCAGACAAGAGTATTCATTTATGATCTTCTTTTAAATTCTTTTGATCCCAAACCGGGCACAGTTTCTGAAGTGTTTGCTATCAAATTTTCTCAATTAACACTTTCAATCATAAGATTTGTACCCTTTTGGAGTGATCCGTCCTTGTAATTTTACAAAATGGCATAAAGAAGTCAGTTTTTGTCTAGTGCTGCTGGAATGCCTGTTTGGGAGAAGGTTACATTTTAATATTTCACCGCCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTAGGTCAAGGAAGAAAGGTAACTAATGAAAACAGTTCGAGACTCTGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGCCTTTGAAATTCTCATTAGATTAAATACATATAAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAAAATGATTTTAATATCAGGGAAAATAGGCGAAGAAAAGCATCAGATAGTAAATGTTTGAAGAAAAAGTACTGATCATAGTTCAGAAATGTTCGGATGGATTATATAGTGTCTTTGGGCTTATAAAATTCACTTCAAAGTTTGAATGCAATAAAAATAATCTGGAGATTAATAATTTTAAGAATCTTCTGGCATTAGATAATTCTTAATCATTTTAATGTTGGAGGAAAAAACATTGCAAATTTCGCAGTCTCATAAACATTAGTCTTAGAGCACGCGTTCACATGGTGAAAGTGATTGCTGACATGAAGAGGAGGATGGAGATCTAGGTTGGGGATTTTGACTTTTGCTTGTATTTAGTTATTAATATGATTGTCGCAGGCATGAATTAGTATAGTAGCCAAACACACTAAAATGTTTGCATTAATTCCCCCCCCCCCCCCCCCCCCCCCCCCCAATTTCTGACATGGTTAGACATGACTTTAACCCAAAACTTATGATTTTTTCTTCTTAAAATTTCATTACATATTGATAAATCCTAAAGTAGTATTAGGAATTTAGGATGATATCTTCATCCTCTAGTCTTAACTAATTAAATAATTTTATATCTTGTAAGATTTCAAATATCATTGATTGAATGTTTTTACTGAAGTACATCTTGTTTTTATGTTAAGTTTACAAGCTTTAGTATTAATATATCAATATAGGCACATCAGGTCGTCTGGTCCACTTAGCAGAGTTAATATGATGAAAATATTATGTTTATATTTTGAATGTAGGATTGTAAGATGGAATTCTTTGTGATAAATGTAAAAAGTGGAGAAAAAGGGAAATATAAAGTTACTTTATAAGTGTAAAAAGTAGAAATAACGAGGAGGGTGGAGTTCCTCGATAAATATGAAAGTAGAGAGAAAGAGGAATATGACGTTACTGAATAAGGGAGGAAAGTTCAATAGTGTTCACTATCGAAGTTGTGTTTAACAACCAACTTAAGAAATGGGTGAGCTACGGTTTAGTCAACCCCATAATATGTGTCTCTAACATGTACATGTTCTACTTTTAAAGAAATTGATGTGTCATAATGTCCGTGTAGGTGTGCTTCTCATGCTGGAATAACATACTGTTAAGTATTAACTCCAAGAAACCTCTTTGGGAAATTTATTTTTCAAGTAAGTGAATCTATTTTATTTTGGAGAAGTGCCTCTTTGGTAGATATGCTGTCCCAAAGTTTTAATTTAGCCAACATCTCTCAGTGTTGAAAAATAGGTTTCAAATGTCTCAACGACATTAATTAGGTTCTTTAATTATTATTTAAAACATTTTTAAACTTAAAAAAAATATTTCTCTCTTCCTTTCAACACTATATGCTTTTTAATTCATTCAGAAAAATACTAACTAAGATTAACAGAATCAAAATGAATGGGAAATAGATTAGGGAATCAATGTTGAAGGCATATTTGTTGTTATGTTATGATTTTGAATCCCCTTGTCATTTGTTTGTTGGCTTTCAATGATGGAGTTTCTCACCGGTCTGGGATCAAAGTTTTTAAAACTTTGTGGGTAGATCTTAGAACTCAGACCAAATCATTTTCTTCCTCTTCATTTGTTTCGCTCCAACTGGTTTGGCCAAAAGACTAAAAGAAGTATTTTCCCTAAGTTTTTTTCATTGGTACCTATCCTGATCTGGATCCATTATAATATCTATTCTTGTTGTCTTTTCTACCTGGAATGTTTGCTCCACAAGTAGACAAAGAAAAAAGAATAGAAAAACCCTCCATGATTAGGAAGCTTTATACATTCTCCATTCCTTTCCTTGATAATATTCTTTTCTTCTGATGGGGTAGATTTTGAAAGTGATTCATTGAGGTTTTTGCCATTGAAATCTCCTTGACCTGCCGGATATTAATGCATTTTATAAATATTTTTTAAGGTTTAGAAGTCTATTTGGATCGACTCCCTAAGAGCTTAGGAATGTAAAAAAAAAAACGTTATTAGTGTCATTGCAAATAAGTTGGTTGAGAGTTACTTACCTTATCTAATCACTATTATTGTTCCATAAGATTATTGCTTGTATGGATATTACCTTATCTAACGCTTGTATGGATGGTAAAGTTAGCTTATAGGTATTTAGTAATGTGTGCCTGAAATTCAGCGCATTTAATGACAGGTTTTGTTGATTAAAATAATTGTCAGCTTTATCTAAAGCACAACCAAAATTATTATAAGCAAAAACATGAGCCACTTAAAATTATTGGAGAGATGTATTTGTATTGTAACTGGAAACTTTACCCAATTGTACATAATTAGTTTGGTGTTATAGTGCATTTATGAAGCTGTTGATTGAATATGTTTGGGAGGATAAACCGACTCATTCCACTAGTTACATCACAGCTAAAAACAGAAAAACTTGAAAACTATTTCATACCGCTTTCTAATACTAAGGGATTAGTGTCCATCCAATGTCACAGATGTCAATAAAGATATACTTTTACCAAAGTTATTTATAGGGGGGACTGGCTTAAATCTTAACACTGCTACGAACCCACTACCCTAAATATCTCTAGTTAGGTACGGCTTTCCCAAAATGAAAAATAGGAATTGCTAAGTAGGATTGGTGCTGTGACCACACAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACTTGTAACTCTTCTTTCCGCTGCTTTTTGTTTTTCCAATGACACCAACATTCCTCTTTGATTTTAGTCTTCCGATTTGAAAGCATGCCTCCAATGTTACCTCTTTCCCATTGCTGCATCTACTCTCTACCATTGCTTTATCTGTTTTCACAAGCTGATCATAGTACTCTTTATTCCTTTTCTCCAGCCCATAGATCTGACCTTGAAGATCTTCAATTTTCTGGTTAAGTAGGTATACCCTATGATCATCTCTCAGCTTCAGCATACATCGCGCCATCTCGCCTGCCTTCTGTTTCATAAAAACAGACTCTGCTACCAACCCCTTGTTTTCCTCCATCAATGATTCCACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATCAGCCTCTCAGACTCCAACACATCAAGCAAACTCTTCTGAAGCTCAATCTTTCTTGACGAATCACAGCATTGCTTTTCCAGGGTGGTTACCTCATTTGTAAGAATGTCGTACTCCACATTCTTCATCACAAGCTCAGCGATAAAAGCATCGTTGTCTACCATGCCATAGTATTTAGTTGATGTTACAGATACTTGTTGGTAGGACAGAGAGCTCTCGGCATCAGACTCGATCTGACTGATTCCTGAATCTTCAGCTCCATCAAAAGAGTCGAGGGTTGAAGTAACAGAAAACTGTCTATTGTGATGTTTTGCAACAGTTTGGATGTAGCGATCTGATAAGGTGGTGTATGCAGTGTACAGTTCTTGGAGAAGTGCCAGCAGTTGAGGACGTTTGTTGTAGTAAAATTCTGCACGTTCAGCAAAAGAGTCCCCAACATTGTCCTCTTCAGCATTTTTCATAGCAAGTAAACTGATCCTCTGCTCCATTTCTGCCATAGGACATTATGTTTCAAGACAACTTAAATTTAAAAGCCAAAGAAATAAGAAAACCACATTTTGTAGGCGCATCATTTTGGCTTAAAATAATAATGATGAATTGCACGAACTGTTGCTTTTAATTGATTACACATATAAGATGTTATTTGACAGTTTTTAGACTATAAATTGCCAATGGATATCAAATAATACATTCAAAAGAAGAAGAGTTCAAAATTTCAAATTCCAGATAATGCCAAAAATATAGACCCAACGGATCCGTGACTTACCAGGGCCAGTAGCTTATTTTGGTTCAAGAAGGGGAGAATAATCTAAGATGGGACCTATGGGACACTATGTAATTGAGATTCAATAAGACAACATAATATTCCAAAATCTGTTGATGTGACATAACATATTTCAAAAACGAACTAATGATATTAGCTATAATTTTATAAAAAAAGTACATAATAACTTCGTTTATTTTTCTTTTAAATTCCCATTTTCTTTTAAATATTTATAAATATTCACGAGGATGGCAATTGAATCTCGGGACAAATTCTATCTTAAAAGTTTTGAATTCCTGTCAAATCGTGGGGCAGAAGGTATGGTTCCCCGCCCTACATTTAAATTCTATTAAAATATTTTGAATGAAACTTATAATTCCAATTCAAAATGTTATAAAGTTGGGACGACTCAAGATAATTTGAATAAAATTCCTGAAAGAGATAACAAAATGGCAAAACCTCCCAACAAATGGAAAAAGAAATGGGTATAAGGTTCACAAATTTCAAAGCCATCACGGGTTTGCATCAATCAGGCAAATAATAAGATGCTCTTTACAGGAAAGTTGTTGAGGACTGCACATCGGTCAGGGATGAAAGAACAGAAAGGTCGCTGTTACGAATATCAAGAAAGAGTTCATACATACACACACTCTCTCACAAGAAAGGTGTGTAGGATGGGGGTTGGTTTCCCTTCTCATAAGTTAGTTTAGGAGTTTCAAATTTTAAAATAAAGTTGGAACAAAATAGCATGGTGAAGGAAATTCAAAGTCGAACCTGGACCGACCAACTTCAGACTCCCTCAGACTAGTCTTACTTCAAACCACCTACCCTTCCAAACTGCAATAAATTTTTCTACATGTATACGCAATCAATCATCAGTCGGTAGGTAAGTTTTTTCCACAGGCTAAGTTTACTCCCTCACCCCTACCCCTCTCTGGTCCTCCTTGGTATTATGGAAAACAAACGAGAAAAACAAAAATTAAAATACAGTAAATTGAGTTTCAAGTCAACAATTAGCATTACCTGCGAGAGAAGAAGATAACGTTGAAGAATGCTTGGTGCTGAGTGTTACACTGTT

Coding sequence (CDS)

ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTCATAGTTCTATGTTCTATCATATTATATATAATCGTGTGCTATCTGTCCCCTCTTATACTAAGTTTGGTAACTATAATTGA

Protein sequence

MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRCSTHSSMFYHIIYNRVLSVPSYTKFGNYN
Homology
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BLAST of Cucsat.G14092 vs. NCBI nr
Match: XP_004137391.1 (uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_013052 [Cucumis sativus])

HSP 1 Score: 353 bits (907), Expect = 2.92e-121
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173

[Close]
BLAST of Cucsat.G14092 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 331 bits (848), Expect = 2.80e-112
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDR
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 173

[Close]
BLAST of Cucsat.G14092 vs. NCBI nr
Match: XP_038894326.1 (uncharacterized protein LOC120082956 [Benincasa hispida])

HSP 1 Score: 299 bits (766), Expect = 1.17e-99
Identity = 154/183 (84.15%), Postives = 163/183 (89.07%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPN-PNYNSFSSSS-------DSISKRSLIHAQTH--HQEIRVCTN 60
           MKGSVCFLC  LPFLPN P+++S SSSS       +SISKR  IHAQTH  HQEIRVCTN
Sbjct: 1   MKGSVCFLCAPLPFLPNQPSFSSSSSSSSSSSSSSNSISKRIPIHAQTHTHHQEIRVCTN 60

Query: 61  RTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAAD 120
           RTCRRQGSFHALEILNALAPP I VN SGCLG+CGAGPNVAVLPDGFVVGHCGTPARAA+
Sbjct: 61  RTCRRQGSFHALEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVGHCGTPARAAE 120

Query: 121 LIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIF 173
           +IIQLSG DSDSVG+SKSLEALALRKRAQCELED NFSQA+LLLSQAIDLKPCGGIHIIF
Sbjct: 121 VIIQLSGGDSDSVGVSKSLEALALRKRAQCELEDRNFSQADLLLSQAIDLKPCGGIHIIF 180

[Close]
BLAST of Cucsat.G14092 vs. NCBI nr
Match: XP_022923909.1 (uncharacterized protein LOC111431489 isoform X2 [Cucurbita moschata])

HSP 1 Score: 250 bits (638), Expect = 1.40e-80
Identity = 128/173 (73.99%), Postives = 145/173 (83.82%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ   QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQN--QEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]
BLAST of Cucsat.G14092 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 250 bits (638), Expect = 1.87e-80
Identity = 128/173 (73.99%), Postives = 145/173 (83.82%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ   QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQN--QEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]
BLAST of Cucsat.G14092 vs. ExPASy TrEMBL
Match: A0A0A0LQA2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 1.41e-121
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173

[Close]
BLAST of Cucsat.G14092 vs. ExPASy TrEMBL
Match: A0A1S3AUF9 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 331 bits (848), Expect = 1.36e-112
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDR
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 173

[Close]
BLAST of Cucsat.G14092 vs. ExPASy TrEMBL
Match: A0A6J1E7P1 (uncharacterized protein LOC111431489 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 6.76e-81
Identity = 128/173 (73.99%), Postives = 145/173 (83.82%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ   QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQN--QEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]
BLAST of Cucsat.G14092 vs. ExPASy TrEMBL
Match: A0A6J1EAV3 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 9.07e-81
Identity = 128/173 (73.99%), Postives = 145/173 (83.82%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ   QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQN--QEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]
BLAST of Cucsat.G14092 vs. ExPASy TrEMBL
Match: A0A6J1KQA5 (uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 6.02e-79
Identity = 126/173 (72.83%), Postives = 143/173 (82.66%), Query Frame = 0 

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ   QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSVSLTP---IRAQN--QEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L ALAPP I VNPSGCLGKCGAGPNVAV PDGFVVGHC TPARAA++I++LSG  S
Sbjct: 61  TLETLCALAPPTITVNPSGCLGKCGAGPNVAVFPDGFVVGHCATPARAAEVIMRLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

The following BLAST results are available for this feature:
BLAST of Cucsat.G14092 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G14092 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137391.12.92e-121100.00uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharact... [more]
XP_008437609.12.80e-11293.64PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo][more]
XP_038894326.11.17e-9984.15uncharacterized protein LOC120082956 [Benincasa hispida][more]
XP_022923909.11.40e-8073.99uncharacterized protein LOC111431489 isoform X2 [Cucurbita moschata][more]
XP_022923908.11.87e-8073.99small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1... [more]
BLAST of Cucsat.G14092 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQA21.41e-121100.00TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 ... [more]
A0A1S3AUF91.36e-11293.64tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ... [more]
A0A6J1E7P16.76e-8173.99uncharacterized protein LOC111431489 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1EAV39.07e-8173.99small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1... [more]
A0A6J1KQA56.02e-7972.83uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 167..200
e-value: 20.0
score: 12.3
coord: 131..164
e-value: 59.0
score: 8.2
coord: 201..234
e-value: 0.013
score: 24.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 201..234
score: 9.3814
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 126..257
e-value: 4.8E-19
score: 70.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 131..250
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 42..122
e-value: 1.7E-7
score: 33.3
NoneNo IPR availablePANTHERPTHR47682TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEINcoord: 23..256
NoneNo IPR availableCDDcd02980TRX_Fd_familycoord: 45..112
e-value: 8.74374E-13
score: 60.3336
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 45..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14092.T2Cucsat.G14092.T2mRNA
Cucsat.G14092.T5Cucsat.G14092.T5mRNA
Cucsat.G14092.T6Cucsat.G14092.T6mRNA
Cucsat.G14092.T4Cucsat.G14092.T4mRNA
Cucsat.G14092.T1Cucsat.G14092.T1mRNA
Cucsat.G14092.T3Cucsat.G14092.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding