Cucsat.G13970 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13970
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	HNH domain-containing protein
Location	ctg1869: 667291 .. 670311 (-)
RNA-Seq Expression	Cucsat.G13970
Synteny	Cucsat.G13970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGTGACTACAAATTTTGTTAATATATATATATACACATATATATATTGTACCATAGACGACATGTCGTTTAGGAAGTGAAATAACAGATAAGGTGGACTTTCCCATTATGACCTCTCAAATTATCCAAGAAAGAGTCAAAGTCAAAGATGAGGCGAAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCCTCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCCTTATGGCTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTCGACCGGGACCTCGTCACCGGCGAATCCAGTCTCCTTGGAGACCTAAAATTCTCTCCAGATGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGTAGTTCCCCTTTCCGAATTCTGTTTTTTTTTTGTTATTCCTCTGTTTTAGGACTGTTGTGAGGTGTTTTTGTTTAGTTCTCGTAATTTAGGCTGTGGGATGGAAATGAGTAAGAACTCTTGATAATGTGCTCATTAGAGACATGGTAATGTATTACTTCCAATTCTTGTTGGGCCATGCTGAAATTAGCTTGGTGGGTTTTTCTTCTTTGTACATATATGATTAGGCTGTTATTTTTAATGTATTGTGACTTGAAAATCTTCAATTTCTGTTTCTATTTAGTTTTTTTTCTTTTTGAAAAGGTATTGTAACAGAAGTTGGGAGTGGAGGATTTGAACCGGACCTTTTGTCCTTGGTACAAACAAGTGGTGGTTAAGCTGAGCTCATGTTGGCCAATCCTATGTATTTAATGAGTTGTTTTCAATTTTAGTATTGGATATTTGAAGTTTGTATATGGTTGTTGAATTGTCTTATTATATTCTCTTCTGTCTGTCCCAGAAGATTTGTGTACGATATTGTTTTTTTATTGTTTCCTAAGTTTTTGTGGACTTTACCAACCGAAGAGATAGCATTAGAAGACGACTGACTAAATGGTTAAGTTTATGCGAATGGAAGCTTAGTACGAGCAACTAAATGTGTTAGGAAACGAATGAACCGATGAAATGAAAATTAAATTACTTTGGATACAGTTAATTATCAGTAAGCATGAACTTTGCGACTTCAAAATTTTTAAGGGAGGTTTGGGATCTTATCCTAATTGAGTGTGAATATTCCATTAGTCATCCCTTTATCATTTTTTGTATTTGCTGAAAAGTTGAGTATGAGATTCTGAGAGTCTACTTGTTATGAAATATCTTTGCGATATTTATTTCTTAATAAATTCAGTAAGTGTTTTTGAGTTACCCTTCAGGCTGAGTGTATGAATACTTCATATTGCAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTCTTGCAGGTAATAATCCTAATGACTCTCCTTTGTCCCATCCAAACTTCATTTAGTGTTGTTTTCAACCTTCGCTTAGTTTGCGTTGTTTTACGGAGGATAGGCAGCATTATTCCTTGAAATCAATAGGACCAAGAGGATATTATATTATAGAGGACAGAGCTACAGATTGTTCTGTTTGCTAAATAATGTGTCCCCCATGGCCAGATGTTACTACATAATAGTTCTTAATGCTTTGTTGACTGTGCTTCTGACTGTCTTTTCAATTATTTGATTGTCTCCTCTCTCAAACTTTTCCTTTGACGTACTGAAGGATGAACACTGTCCCCTCATGACTGGTCATAGTTGATTGTTCTTCTTTAACAAGGGACCTGCCCTTAGATACTAGAGTTTACAAGAGTTAATTACTTGCTAGATTATAATTGAAATTCTTTATTCAGATTTTTCTATTCATCATGTGTAAGAGGACGTTACATAGTTCTACACTTGATATTATTTATTTTCAATGACTCTTTTACATTATTCATTATTGTAAAGTCAGGGGGTTGTTAATCCGGGAAGGACGTACAACCACGCAGCATTGTGGTTTAATACATCTAGTCTTTGTTTAAGTTTACTTCCCAAGTAATTTTGGAAGCCAAAACTTTGATTTAATCATTTAAAATGTGATTATTCAAAATGTGCTTCTTAAGTGATTCAATCACTTTGGAATCAATTTTATTTTGATTTATTATTTGTAGAATCGCGTTTAGATATAGTGCAAAAAAACAAACTTGATTAAAAATCACCTTTAGAAAATGTAACCACACTAAAATTTTAATCAAAATAAATTTTCTTAAGAGTTATCGATCGAATACAAAAATACCACACTGACTGCTATGTATTTGGTGGTTTGCTATAATTTCTATATCTCATAACAGTTTGAATTATTTTGTTTGCCAATAATTTCAGATAATTTGTTTCGTTATTCAAACCATTCTTTATTGCAAGAAAGAATTCTTCCAAATTCCTACTCCCAAGTCCCACCATCTTCTTCTTCGTCTTTTTTCTCTCTCTATGTTGTTTAGTAGTTAGCATATTGCGTTATGTTTATTATCTTCTGATGGCTGTATTATTCACGATGTAGGCAACTGTGAATCGATCGAAGGGAAATCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTACATTAGCTTTTGATTAAACAACAATATCTAAGGGTATTCAATTACACCTTGGTAATGATATCATATGGTCAATATGTTTACGTAATTTACAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGACTAATTGAGTTGATGATATTATAACCTTTTGTAAGAATTGATTCCAGGGTAAGACATGGAAACTTAACAAAAAAGAAACGAAAAGATTGAAATGAAAAAAGTAGGGAATTTTTCCCATGCCCTTATTTCATTCCTTTATAGACCAACAAGTACGTGTAATTCGAACAAGCTCATTGGTTGCATACTTTATGCCTTAATGTCTGATCTGATGTGTGTAGGATCTATGATTGAATGGTTAGAGTAGTTCTAAAGAAAGTTTGATCATATTGGAAAGGAAAGAAGTGAAAGAAAAAGCATGAAATGGAAGTTTCTGTGAATACATTTATAAAGTTAAAATTCCTAGCAATCTATCCCACTATCAGGCAGTA

Coding sequence (CDS)

ATGAGGCGAAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCCTCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCCTTATGGCTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTCGACCGGGACCTCGTCACCGGCGAATCCAGTCTCCTTGGAGACCTAAAATTCTCTCCAGATGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTCTTGCAGGCAACTGTGAATCGATCGAAGGGAAATCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

Protein sequence

MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

Homology

[Close]

BLAST of Cucsat.G13970 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus])

HSP 1 Score: 271 bits (694), Expect = 1.26e-90
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (668), Expect = 1.15e-86
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. NCBI nr
Match: XP_038880609.1 (uncharacterized protein LOC120072255 [Benincasa hispida])

HSP 1 Score: 247 bits (630), Expect = 7.03e-81
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MRR+KESKKKTR SSPLRDRTG PTSLESR YGS+PSSLSPSASLLDRDL+TGE+SLLGD
Sbjct: 1   MRRNKESKKKTRSSSPLRDRTGDPTSLESRRYGSNPSSLSPSASLLDRDLITGEASLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDP RWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDLVSDYNPRSFPHSVKQQCWDKAEKIKGRDPSRWRRDALGNIVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. NCBI nr
Match: XP_022933556.1 (uncharacterized protein LOC111440950 [Cucurbita moschata])

HSP 1 Score: 233 bits (594), Expect = 2.12e-75
Identity = 114/132 (86.36%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MR SKESKKKTRPSSPLRDRT      ESR +GSH S LSPS SLLDRDLVT E++LLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233 bits (593), Expect = 3.01e-75
Identity = 114/132 (86.36%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ESR +GSH S LSPS SLLDRDLVT E++LLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPD SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 6.11e-91
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 5.57e-87
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 5.57e-87
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 1.03e-75
Identity = 114/132 (86.36%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MR SKESKKKTRPSSPLRDRT      ESR +GSH S LSPS SLLDRDLVT E++LLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

[Close]

BLAST of Cucsat.G13970 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 1.46e-75
Identity = 114/132 (86.36%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ESR +GS+ S LSPS SLLDRDLVT E++LLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSK 132
           CHDYDHILPYSK
Sbjct: 121 CHDYDHILPYSK 132

The following BLAST results are available for this feature:

BLAST of Cucsat.G13970 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138170.1	1.26e-90	100.00	uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical ...	[more]
XP_008453210.1	1.15e-86	96.21	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]
XP_038880609.1	7.03e-81	90.91	uncharacterized protein LOC120072255 [Benincasa hispida]	[more]
XP_022933556.1	2.12e-75	86.36	uncharacterized protein LOC111440950 [Cucurbita moschata]	[more]
XP_023529236.1	3.01e-75	86.36	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G13970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUI5	6.11e-91	100.00	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]
A0A5A7US43	5.57e-87	96.21	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	5.57e-87	96.21	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A6J1EZE0	1.03e-75	86.36	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]
A0A6J1I688	1.46e-75	86.36	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 122..155 e-value: 1.5E-4 score: 21.9
None	No IPR available	GENE3D	1.10.30.50		coord: 79..172 e-value: 4.4E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 5..200
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 5..200
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 109..153 e-value: 1.14438E-5 score: 39.7624

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13970.T1	Cucsat.G13970.T1	mRNA
Cucsat.G13970.T4	Cucsat.G13970.T4	mRNA
Cucsat.G13970.T2	Cucsat.G13970.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding