Cucsat.G13963 (gene) Cucumber (B10) v3

Overview
NameCucsat.G13963
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionVacuolar protein sorting-associated protein 29
Locationctg1869: 582766 .. 585082 (-)
RNA-Seq ExpressionCucsat.G13963
SyntenyCucsat.G13963
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACTATCTTAGTGTTAGTAAGATTATGAAGGTCACTTTCCAAAATTTCTTTAACCATTTGCCCAAAATCCTAAATTTGACCTTCTTGATGCCCTCTCCGATTCCGATTTTCACCCCCCGATTCAACCTTTTCCTACCCAGTTCCCTTCTTCGTTTTCGTCTCCACATCGTTCCGATTGCTGACTGAAACTCTTGTCCACCCACCAGAAGGGAAGAATCAGCAACAAAAAGGAGAAGGGTCATACCTTCGAAGCCAATCGAGAAACGACATTCAAGAGTTACGGAAACGTATTTTCATGCCAGCTTCCGCCAATTAATCAAACCCCTCTGGTATTAACGATCCTCAAGTTCTTTATGATTCCGATGCACAAATTTCCTTATAGTTTCGCACATTCAGTTCTATTCAATTTCGTTGTCAATTACTTTGGTGATCAGCTTCTGGGCATGTCTCCTTTCGCTGAAATTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTTTTTGGCAGAATTGTAAAGTGGGTTTGGAGTGAGGATGGTGTTGGTGTTGGCTTTGGGGGACTTACATATACCACATAGAGCTCCTGACCTTCCCGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCATATCATTTGCACCGGAAATCTTTGTATCAAAGTATGTTCAAATCATTTTTCCAGCTACTTCTGTTGTCGTACTTGGTGTCATAAATTGTTATGCTTTTTGATATCTATGGTTGTGCATCTTGAAGAGAATTTAGAGTCTGAATTAGTAATCTCTACTACAGCTGCCAAAGTTCAAAATATTAGAATGGAAATGGTATCAAATGTCCATGGAAGTCTCCAGTCCTCCTTCCCTGTCATCTAATTGTAGTTGAGATTGATTGATATATTTAGATCATCTTCTTTCACTATAAACTTATGAGTAAGATATAAAAGTACTCCAATCTAAAAGAACAATACCAAGTACATAGTAAGACATAAATGTTCTTGCAGTCTTGTCTTTTAGCCATTTTGATTGATGATCTTCGTATCCAACTTTCAAACACTTGTAATCAATGGAAACATCATTAGGCTATGTCCTGAATTAGTAAATATACTATTGATTTGCATGAGTTGTTGGGTTACATTGTGAATTATGAACCTGGGAAACATGCATGCTTCTTATAGGGTAACATGTTCGATCCGTGGTTGTTGAACTCAAACTTCGTATGTCATCTGTCATATCCTAACATTGAATTTTCCTCATAGCATTAGTCTTACTGATCTTTTTCTTAGCTTGTGCTGTATATTTTTCTTAGATTGATATATAATTCATCCAAGAGATTCTGCTGGTAACATCTTTGTACCATTGAATTTTTTCAAGAAGTGAGATGCAGTGAACTGCGCAAGTATCTTAGTATTCTGTTGTGCCAAATGTAACAACATCTTGAACTTGAACGGCAATAAACTAAATATCTCCATTGTGTGACTGGACCTTCGGTTATTTTCGTTTTAAATGGAAATTTTATAACATTCAACAATGTACTTTGTTTAATACTTCCTTGTGCTTCAACTTCAAATGTTAAGCTTAGTGATAACTGACGGAAGATCTTAGATGTTATGAAAAAGAAAACTATAGATTCAAAATTCTTTTCAAGGAAAACTTGCTTGCATATGATATATCAGGACTTAATCAATCACGTTGGACTGTGCATTCACGTCTATTTGGATCTCTGTTCATAATATATGCTTTTGGGGCTTTGAACATTATGTTAAGCACCAACTTGCATGTAACGTTGTCTAATTCGTCGTACAAGTGGTTGAGTTTTTTTGTTCAATTGGTTCATATCTCCTTGGTAGAAATATTGGTGTGATGGTTCAAAGTTTACTGGTAATGTTTCCAGGAAGTTCATGACTACTTGAAAACTATTTGTCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCTGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTATTGTTTGTTGCACTTTTTTCATCTTGATCACATTTGTTTTTCAAGTTGTCCAATTCTCCCAGATTATTCCTTATCAAGTGTACAACGTGTCATAGTTTTCATCATTGTGAGGGATCATTAGAAATGGTTTCAGATACACAATGCTCTACTATTAAGGGGTTGACTAAAGTTTCCTGTTTTTTTCCTTCCGTATCTTGAATCATGAACTTAAGTTCCTGAATGTCATACCTTCTGATTTATCGTCTGTAGTAACCATGAACAGAAAATTGTACTTCAAGTTTTCAACTAAGCTAACAAAACTTCTGAGCTACCAAAAGTTAACATTAGCAAATAAGTTGTGTAAACATTGTATAATTTTGCCAACTTTCTGTGGGAGCAAACTTCGTGTCCATGAATTTTATTTGTTGTCTGGCTAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACACGAGGGAGGTGTGGTGATTAACCCCGGATCTGCAACAGGTGCATATAGCAGCATCACCTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAAACAACCACAACTGCTCATTGACTCGAACAAATTGGCCTTTTTACGAACATAATGAAGTTAATTTCTTTTATGGAGTTGTTGTTGTGATGCAAAACAATGCTTAATCTTGCTGAAAAAGATGCTGTTGTTTCTGTGGTGATTGATCCCAGAGAAGAGTTCTTGTGACTTTGTTTATTCGATATTTGATGAGGTTGTGCACAGAAACCCTTGGTTGTTCTTGTTGGCACCTTGCCTCAATTTCTTTAGTATCCAAATACCCATCTATCGAGATTGAAGATTATGACAAGTACTAGAGTTATAACACGTTCCAAAAGTCTCCATTAATGGATAAATGTTAATAATGGTCATTTAGATGATGCTCTTGTCATTCCCCTCCCCTGAATGTACCGTGGATTAACCATATTTGAATCTGTGGTTGCATTTCTAGCAATGTAATTACCCACCAAGACACTAATATACTAATATTTTCAAATGTAAGTTCCATTTATTTAATTCTATAGAATTATTTTATCTCCCAACAAGAGGTGGAGGAGAAAAGTTGACATTAATAACATCC

Coding sequence (CDS)

ATGGTGTTGGTGTTGGCTTTGGGGGACTTACATATACCACATAGAGCTCCTGACCTTCCCGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCATATCATTTGCACCGGAAATCTTTGTATCAAAGAAGTTCATGACTACTTGAAAACTATTTGTCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCTGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACACGAGGGAGGTGTGGTGATTAACCCCGGATCTGCAACAGGTGCATATAGCAGCATCACCTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAAACAACCACAACTGCTCATTGA

Protein sequence

MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTTTTAH
Homology
[Close]
BLAST of Cucsat.G13963 vs. ExPASy Swiss-Prot
Match: Q9STT2 (Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 GN=VPS29 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-46
Identity = 82/92 (89.13%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1  MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 93
          RGE+DE+ RYPE KTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEFDEDARYPENKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. ExPASy Swiss-Prot
Match: Q9UBQ0 (Vacuolar protein sorting-associated protein 29 OS=Homo sapiens OX=9606 GN=VPS29 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-34
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 2  VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
          +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1  MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVL 93
          G++DE   YPE K +T+GQFK+GL HGHQV+
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVI 91

[Close]
BLAST of Cucsat.G13963 vs. ExPASy Swiss-Prot
Match: Q9QZ88 (Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-34
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 2  VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
          +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1  MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVL 93
          G++DE   YPE K +T+GQFK+GL HGHQV+
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVI 91

[Close]
BLAST of Cucsat.G13963 vs. ExPASy Swiss-Prot
Match: Q5R9Z1 (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-34
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 2  VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
          +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1  MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVL 93
          G++DE   YPE K +T+GQFK+GL HGHQV+
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVI 91

[Close]
BLAST of Cucsat.G13963 vs. ExPASy Swiss-Prot
Match: B2RZ78 (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-34
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 2  VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
          +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1  MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62 GEYDEETRYPETKTLTIGQFKLGLCHGHQVL 93
          G++DE   YPE K +T+GQFK+GL HGHQV+
Sbjct: 61 GDFDESLNYPEQKVVTVGQFKIGLIHGHQVI 91

[Close]
BLAST of Cucsat.G13963 vs. NCBI nr
Match: XP_004138157.1 (vacuolar protein sorting-associated protein 29 [Cucumis sativus] >XP_008453189.1 PREDICTED: vacuolar protein sorting-associated protein 29 [Cucumis melo] >XP_038879970.1 vacuolar protein sorting-associated protein 29 [Benincasa hispida] >KAA0057934.1 vacuolar protein sorting-associated protein 29 [Cucumis melo var. makuwa] >KGN63660.1 hypothetical protein Csa_014380 [Cucumis sativus] >TYJ98621.1 vacuolar protein sorting-associated protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 200 bits (508), Expect = 2.38e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. NCBI nr
Match: XP_022921574.1 (vacuolar protein sorting-associated protein 29-like [Cucurbita moschata] >XP_022987203.1 vacuolar protein sorting-associated protein 29 [Cucurbita maxima] >XP_023515675.1 vacuolar protein sorting-associated protein 29-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7023185.1 Vacuolar protein sorting-associated protein 29 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200 bits (508), Expect = 2.38e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. NCBI nr
Match: XP_022135231.1 (vacuolar protein sorting-associated protein 29 [Momordica charantia])

HSP 1 Score: 198 bits (504), Expect = 9.66e-63
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEE+RYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEESRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. NCBI nr
Match: XP_023529239.1 (vacuolar protein sorting-associated protein 29 [Cucurbita pepo subsp. pepo] >KAG6587529.1 Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021505.1 Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (502), Expect = 1.95e-62
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEE RYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. NCBI nr
Match: XP_022932429.1 (vacuolar protein sorting-associated protein 29 [Cucurbita moschata])

HSP 1 Score: 197 bits (502), Expect = 1.95e-62
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEE RYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. ExPASy TrEMBL
Match: A0A5D3BIV2 (Vacuolar protein sorting-associated protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002440 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.15e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. ExPASy TrEMBL
Match: A0A6J1JIS6 (Vacuolar protein sorting-associated protein 29 OS=Cucurbita maxima OX=3661 GN=LOC111484824 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.15e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. ExPASy TrEMBL
Match: A0A0A0LP31 (Vacuolar protein sorting-associated protein 29 OS=Cucumis sativus OX=3659 GN=Csa_1G009640 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.15e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. ExPASy TrEMBL
Match: A0A6J1E0V7 (Vacuolar protein sorting-associated protein 29 OS=Cucurbita moschata OX=3662 GN=LOC111429798 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.15e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

[Close]
BLAST of Cucsat.G13963 vs. ExPASy TrEMBL
Match: A0A1S3BWS4 (Vacuolar protein sorting-associated protein 29 OS=Cucumis melo OX=3656 GN=LOC103493980 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.15e-63
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
          MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1  MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVL 92
          RGEYDEETRYPETKTLTIGQFKLGLCHGHQV+
Sbjct: 61 RGEYDEETRYPETKTLTIGQFKLGLCHGHQVI 92

The following BLAST results are available for this feature:
BLAST of Cucsat.G13963 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STT22.0e-4689.13Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 G... [more]
Q9UBQ01.8e-3468.13Vacuolar protein sorting-associated protein 29 OS=Homo sapiens OX=9606 GN=VPS29 ... [more]
Q9QZ881.8e-3468.13Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29... [more]
Q5R9Z11.8e-3468.13Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 ... [more]
B2RZ781.8e-3468.13Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=... [more]
BLAST of Cucsat.G13963 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138157.12.38e-6398.91vacuolar protein sorting-associated protein 29 [Cucumis sativus] >XP_008453189.1... [more]
XP_022921574.12.38e-6398.91vacuolar protein sorting-associated protein 29-like [Cucurbita moschata] >XP_022... [more]
XP_022135231.19.66e-6397.83vacuolar protein sorting-associated protein 29 [Momordica charantia][more]
XP_023529239.11.95e-6297.83vacuolar protein sorting-associated protein 29 [Cucurbita pepo subsp. pepo] >KAG... [more]
XP_022932429.11.95e-6297.83vacuolar protein sorting-associated protein 29 [Cucurbita moschata][more]
BLAST of Cucsat.G13963 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BIV21.15e-6398.91Vacuolar protein sorting-associated protein 29 OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1JIS61.15e-6398.91Vacuolar protein sorting-associated protein 29 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0LP311.15e-6398.91Vacuolar protein sorting-associated protein 29 OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A6J1E0V71.15e-6398.91Vacuolar protein sorting-associated protein 29 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A1S3BWS41.15e-6398.91Vacuolar protein sorting-associated protein 29 OS=Cucumis melo OX=3656 GN=LOC103... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029052Metallo-dependent phosphatase-likeGENE3D3.60.21.10coord: 1..182
e-value: 1.3E-80
score: 272.0
IPR029052Metallo-dependent phosphatase-likeSUPERFAMILY56300Metallo-dependent phosphatasescoord: 1..181
IPR024654Calcineurin-like phosphoesterase domain, lpxH-typePFAMPF12850Metallophos_2coord: 4..157
e-value: 2.1E-20
score: 73.5
IPR000979Phosphodiesterase MJ0936/Vps29TIGRFAMTIGR00040TIGR00040coord: 3..157
e-value: 5.3E-30
score: 102.5
IPR000979Phosphodiesterase MJ0936/Vps29PANTHERPTHR11124VACUOLAR SORTING PROTEIN VPS29coord: 1..186
NoneNo IPR availablePANTHERPTHR11124:SF25VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 29coord: 1..186
IPR028661Vacuolar protein sorting-associated protein 29CDDcd07394MPP_Vps29coord: 3..180
e-value: 2.9363E-124
score: 345.733

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G13963.T1Cucsat.G13963.T1mRNA
Cucsat.G13963.T2Cucsat.G13963.T2mRNA
Cucsat.G13963.T3Cucsat.G13963.T3mRNA
Cucsat.G13963.T4Cucsat.G13963.T4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0042147 retrograde transport, endosome to Golgi
cellular_component GO:0005829 cytosol
cellular_component GO:0005768 endosome
cellular_component GO:0030904 retromer complex