Cucsat.G13832 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13832
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Very-long-chain enoyl-CoA reductase
Location	ctg184: 1166904 .. 1173284 (+)
RNA-Seq Expression	Cucsat.G13832
Synteny	Cucsat.G13832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTACTCCCGGAGGGATTTGGCCAACGGCCAACCGATTTGGGCGGCAGATGAAGGTGACTTAACATTTTCGCAGTTCCCCTTTTGCAAACCAAGTGGTCCGTCCGCCAATTTTCTATTTCTCCACAGAGCTTCGAACTTCACGCCATTAATGGAATCTCTCACACCTTCATTTCCCTCTCTTTTTTATACTCTTAAATCCCTAGCTGCTGCTGCAGCAACAACAATCAGTACTGCTGTTTACTCTCCGTCTACACTTTGTTCAAGCTATGAAGGTCTGAGAGTATTCATCATCAGTGGCCTTCGAATCAATGATTCGGTGAGTAGCTTCTTGTTTAATCTCGTTTTCGTTTGGTTCTACTTTAATCGCAGAGTTTAGGTAAGCTGCAGTGTAGTTGAAAACTTGAAAGGTACTTTTGTGCGATGGAGAGTTGAAAATTGTAATCTCACTGTTCTCTAGATTTTCTATACCGATGTTCTTATGCATTGTGTTATGTAGGCTACGGTGAGCGACCTGCATGGGGCTATTCTTAGTGACGTTGTCTTTGTTTCTGGATGATTAAGCTGTAGGTTTAGTGTTTTCTACTAGGATCATGGATTTTATTGAGATTTGAATCACCTGCTTGCTCTGTTCTTAATGCTTAATGAAAAAACCATGATATCTCAGTTGGAGTGATTACAAAAATTTTAGAGTGCACCAAGGTCTTAATGATAAGTATAATAAAATCCCCACATATCTCTATAATGGTAAAATATTGTTCACTTTGGGCATAAACCCTTGGTTTTGCTTATGAAACCACCTCAACAAATCTCATACTGATGGAGATAATGGTTGTGGGACTTTGTTTGCAGTCCTAATAATCCTCCCCTGGAACAAAGTACCATTATGAACCTTCCCACATTCGTCTACCCCTGATCACCTACGAGAGTTTGCTCTTATCTACCTAGTTTCAAAGCCAAGTACAGTACAACCATGAATCATTTATGTGAAACACAATTTGTATCGACCACATAGTCACACCCTCAATCTCCTCATATAGAACAAATATCAACTCCTCTAATAGAGTTATTACTTGCTTGTTGCCCAAATTTGATCAAATCTAGGGATTTGTCCACAAGACTCACTATTACCCACACAACTATGTTTAAACATGGCTCTGATAGCAATTGATAAGGACAATGGAACCTCCACATATCTAAAAGGCTTCATAGCAATGGAGATAATTGTTGTCACTTGTATACTTACAATCACTTCCTGGATTTTGTTTATGCACCCAAAAGTTAATATTTACAGTTACGCCTTTGATGAGATAATAAAGGAGTTCAGATATAACTTATGTGCATGTATTTTGCACTAGATTTGGCTTTCTATTTGTAATCTAGCATTCAGAAACGTATTTGTCTTATTATGATTGAGTCAAAGCAATGTTACATATTTATATAGAGAATAAACTAAACCCTAGAGACTATGTAAAATTACAATAAAGGACATATGTATATATATATATATCATAACACTCCCCCTCAAGCTGGAGCAAATATGTCGATCATGCCCAGCTTGTTGCACAGATAGCTTATCTTTGTTCCATTTAAAGCTTTAGTTAGAATATCTCCCAATTGTTCTCTGGTCTTCACATATCTTGTGGACACCAACCCATCTTGGATTTTCTCACGAATGAAGTGACAATCCACCTCAATATGTTTAGTTCGTTCATGAAATACTGGATTAGATGCAATATGAAGTGCAGCTTGATTATCACACCATAATTTAGCTGGCACGGTAATACTGAAGCCTATCTCAGATAATAGTTGGTGAATCCATACTATTTCACACACAGATTGTGCCATAGCTCTATATTCTGACTCAGCACTCGAACGAGAAACAACATTTTGTTTCTTACTCTTCCATGAAACTAAGTTTCCACCTACAAAAACACAATATCCAGAAGTCGATCTCCTATCCTCACGAGACCTCGCCCAATCAGCATCAGAAAAACATTCAACTCTCGTATGTCCATGATCTTTGTATAGGATCCCACGTCCAGGAGCAGCTCTGATACCAAATTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAGTGACTCGACTAGACATTGCATATTCTGTAAGTGTTGTAAGTCAATTCATGTCTTCCCCTACAGTGGATCATTGGGTCTAAAAGCTGCTCCTGGACGTGGGATCCTATACAAAGATCATGGACATACGAGAGTTGAATGTTTTTCTAATGCTGACTGGGCGGGGTCGACAAATGGTCACCGGAAGGTAACCCAAACTTCAAACCTAATGGAGGGCTCCGATACCATGTAATCTAGAATTCAGAAACGTATCTGTCTTATTATGATTGAGTCAAAGCAATGTTACATATTTATATAGAGAATAAACTAAACACTAGAGACTATGTAAAATTACAATAAAGGACATATGTATATATATATATATATCATAACACTATTGTCTTTCTGGATTACTAAAGCATGAATTGATTCTATACTTGCTGGCAATTCCTTGTGAATTTTGCTATAGTTTTCATTAGTTTTTTCCTTTTGCACCATGGATAAAGATTATGTCTCTCAAACTCAAAATCACCGATTATCTTCTCTAATATTCTCCTATCCAACAGGAAGAAAATACTATCCTTCTAGACAGCGTCTTACCTTACCTGCAAAACCAGGGTCAAAAGAGAGGCATGTTGTTCTTATCTCAAGCAAGAAGCTCCAAGATTACTGCAATGGAAACTTGGAGTACCTGACCATCACATTTAAGGACCTTGGTCCCCAGGTTTCTTTTAGAACACTTTTCTTGTTGGAGTATTTGGGGCCACTCCTTATCTATCCCATGTTTTACCACTTTCCAGTCTATAAGTTCTTCGGCTATAAAGATGAGCGTCATATCTTCCCTGTCCAGACTTATGCCATGTACTATTGGTCCCTTTATTACTCTAAGTGGATCATGGAGACCTTATTTGTTCATAGGTTTAGCCATGAAACTTCATGCTTGTCTACTGTCTTCCGTTGCTGCTAATACTACTGGAGCTTTGGAGCTCTGATGAGCTACTATGTAAACCACCCACTTTACATCCCCGTGACTGACATCCAAATGAAAATTGGTTTTGGATTTGAATTGCTATGTCAATTATATATCCAACCAATATTGTCATCTCATATTGAAGAATCTTAGAGATCCTAGTGGAAAGGGAGGCTACAAAATTCCACGTGGATTCCTTTTCAATATTGTAACTTGTGCTAACTACACAACTGAAATTTATCAATGGCTTGGATTCAATATTTCAACACAAACTCTTGCTGGTTATATTTTTGTAATGGCGGCTACCTACATTATGACTAAATGGGCAATTGCGAAACACCGCCACTTGGAAAATATGATTACTATTTGCTTCCTCGTTCATGTAAAATGCACTCCCCTCGTTGATATATTGGAAGGCTTTTACTGTACATTTCTTGCTTTTCATAAGTTTTATGCTTAATTTAGTACCCTTGGTTTTCAATTGATGAAGTCTAGATCAAGTTTATAGGGTGATATGTGCTGTCTAATTCCTCATAACTAACAAACTATTCCATCATGATCAAATTGCTCTTTTTCTTATCATGATCTGAGCTTTTTAATCAATTTAGTATGCTTTTCGTAATTCAAATGTCTAAAATAAATTTTGTCTAGGAAAAGGGTTACTGCTTCATCTACAGTTTTTTGTTCTTTCTATATATTCTAATGTTGACTTGGTGTCTTTTGCAGCTTCTTGATGGGAAGGAAGGGAGGCCAAAATATCCAAGAAGATGGGTGATTCTACCTCCATTTTTCTGAAAACAATAAAAGCCTTCCAGACAACTATGGCTATTGTGCTACTTTAATTAGTATGTTTTTTCCCCATTATAAAACTTGATATAAGTTTTTATAAGGCTTGACCATGAACTCTCATTTCAAAGAGACCTTTTGAGGAGTCTCTAGAGTCTACGCTTTACCTGTTCATTTGAAAGCAATAATTAGATGCAAGAAATTAAATCATTTGACCACTTGAGTAGGCACTGTTAGTCCAATACAACAAAGTTGATTGTTTTGCTCATTCTACCATTTGCACTCAGTCAAATTGTATCGATCTACAATTTGAGCAATGTTTGAAGGAGAATTTGGGAATAATATCAATGAGATAATTTCAGGAGACAACGATATTATTTTATTTCCTTCGAATTCCCTGATTGTATTAAAAAAAAAACAGAACACCAGATGGCTTAATGACCGACTCTGGTTAAAACTTGTTATCCTGCCTAGGATATTTCAAGTATTGCTTGAATTCTTCAATAGTTACCAGCATTCTAGTATATATACAAAAAAAATAAGGTAATAAGGTTGAATATTAAAATCTGTTGGCAAGTATATGGTACTTTTACTTTACTTTCTGAAATTCATCTTTGATGTATGTAATAATCTACAAAAGCAGCAGCTTTAGCCTTTGAAACAAACCTCCTGGAAGCTTGCATTTTAGCCCTGTATGTGTTGAGAACTCTATCCTTGCACTGAGTTTCACTAGAAGAGTTCTATGATATGGCAAAACTATAAGCAAATTCCCAATCCTAAGGAGAACACCGTGGAAATTTGTTTGGTCACCAGTCATTATACATACTATGTAGTTGGCCAGAAATTAGTCTGTCGTCCAATCCTACGTGGCAGTCCAAAATTTTGATAGGCCCTTATTTCACCTCCTAGCCCAGCAGTCACAATGACCAATCCCCATGCCGTAGCTGGGATGGCATGGTGGCCATGGCTGTTTCCGACATCAAACCAGGACCAAGAGGAAGACCAGGAGGAAGATGTTGGGTTGTTGCTGATGGCAGCAGAAGAAGACAAAGAAGGTGAATCACCATGCCTGATAGAAGCTGAAGGTGATGAACTGGGTGATTCACCAGTTCTGGATTCTGAGCGAGTAACTTGAGCTTGCTGCTGCTGTTCTTCATCCGGAGGAGTTGTGGAGGTACTACCACCATTATTATTGTTATTATTGTTATTATTCTCCACAGCATTGTTATTTTTCTTTGGTAGAGGTGGCAACTGCTTCTTATTGTTTGCTATTGAGTTGTTTTCGTCTCGAGTTGGTGAGCTTCCGGCTGAAGCTGGCTGCGTCAAGCCACGTTTTGAATGTCGTTTCGAGTTCATTTGCACCAATGGCGGTTCGCCGCTTATCATTCCAGGCCAGGGGATTGCTACAGAAACATCTTTACATGGGAAGTGTTCGTAACCTCTGATTGCCATCAAACCTTTCTTTGCAGAATTTGGATTTCGTGGCTCCTCTCTCTTCCATACAAAAACTTGAGAATCTTCACTTGCACATATCACATATTTCCCATCTTGACTGAACGAAGCTGTAATTTGGCTGCTTGTGTTTCGGAAACCTGATAATCCAACAATAATATCAGTTCTATTTTATCAACCAATCATAAATTTTGAAAAGTGTTTTGAAGTGGGAAATAAAAAGTTTCTAAGCTTTTAGAACAATGAACAATATTGGAATTTGAATTGTTGTTCTTCCTTTCTAACTTTACGGCTCCTTCCAGCAGGGTGACATGATTTCAGATAAGAGTCTTCTTCTTACCTCTGAATCTATGAGTAACGTCGGTGCCTTCCAAGATTCGAATTCGAGAGTCAGCAGAAGTAACCAGCACTTCAGTAGGGCTCCCAGGAACAAACTGTTCGGATACAAGGTAATTTTGAGGTTAAATTATAAGTTCGGTTCTAGTTTTTCCTAGCACATTTAAAATTTAGTTTGTATAGTTCAATAAAATCTCAAAATAATAATAGTAGTAGATAGTTTATCAAACCCCGAAGACTAAATTATAGTTTTAGTCAACTAAATTCTAACTTTAGGTAAATTAAGTAAGAGCAGAAAGAGGGTTAATTACTTGGAAACCAGTGATCTTTTTTCCATGATTCTTCTTTTTGCTCTGCACATCAACCTGGTGCTTCTGTTCTAACTTGGAATCTATACTCCAAATAATATTGGTAAGTTAAAGTAAAACAACATTAATTAACTATAATAATTATGATTATTACTGTTAATTGATTAGAATTTAATAGGGAGAGATGTGAATGTATCTAATACCCTCTATGCTGTACATTCGGCAAGTTCCTTTATGACAACCTATTACGGCACCCTGCACATACATATAAGGATCCATTGATTTTTTTTTTTTTACTTTTTTGAATAATATTTTTCATAATAAAGACAGCTGAAAACGAACCTGGCCATCAGGTGTATAGGAAGCGGCAGTGACCATTTCATGAAGGTCAGTCCAATCAACCACATATCTATCTGGAATGTTCCATATCCTCACCTTTGCATCTAATGCTCCACTTATGAAATAATCATCATCCATTGGGTTGAACTGTACGCATGTCAC

Coding sequence (CDS)

TTGTACTCCCGGAGGGATTTGGCCAACGGCCAACCGATTTGGGCGGCAGATGAAGGTGACTTAACATTTTCGCAGTTCCCCTTTTGCAAACCAAGTGGTCCGTCCGCCAATTTTCTATTTCTCCACAGAGCTTCGAACTTCACGCCATTAATGGAATCTCTCACACCTTCATTTCCCTCTCTTTTTTATACTCTTAAATCCCTAGCTGCTGCTGCAGCAACAACAATCAGTACTGCTGTTTACTCTCCGTCTACACTTTGTTCAAGCTATGAAGGTCTGAGAGTATTCATCATCAGTGGCCTTCGAATCAATGATTCGCTTCTTGATGGGAAGGAAGGGAGGCCAAAATATCCAAGAAGATGGGTGATTCTACCTCCATTTTTCTGA

Protein sequence

LYSRRDLANGQPIWAADEGDLTFSQFPFCKPSGPSANFLFLHRASNFTPLMESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDSLLDGKEGRPKYPRRWVILPPFF

Homology

[Close]

BLAST of Cucsat.G13832 vs. NCBI nr
Match: KGN54247.1 (hypothetical protein Csa_017878 [Cucumis sativus])

HSP 1 Score: 107 bits (266), Expect = 1.52e-27
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 28 MESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDS 83
          MESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDS
Sbjct: 1  MESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDS 56

[Close]

BLAST of Cucsat.G13832 vs. NCBI nr
Match: TYK23520.1 (hypothetical protein E5676_scaffold500G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 4.98e-19
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 28 MESLTPSFPSLFYTLKSLAAAAA-TTISTAVYSPSTLCSSYEGLRVFIISGLRINDS 83
          MESLTPSFPSLF TL+SLAAAAA TTISTAVYS STLC S+EGLRVFI  GLRI+DS
Sbjct: 1  MESLTPSFPSLFPTLRSLAAAAAATTISTAVYSSSTLCPSHEGLRVFITGGLRIDDS 57

[Close]

BLAST of Cucsat.G13832 vs. ExPASy TrEMBL
Match: A0A0A0L0X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295510 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 7.37e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 28 MESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDS 83
          MESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDS
Sbjct: 1  MESLTPSFPSLFYTLKSLAAAAATTISTAVYSPSTLCSSYEGLRVFIISGLRINDS 56

[Close]

BLAST of Cucsat.G13832 vs. ExPASy TrEMBL
Match: A0A5D3DJF8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00240 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.41e-19
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 28 MESLTPSFPSLFYTLKSLAAAAA-TTISTAVYSPSTLCSSYEGLRVFIISGLRINDS 83
          MESLTPSFPSLF TL+SLAAAAA TTISTAVYS STLC S+EGLRVFI  GLRI+DS
Sbjct: 1  MESLTPSFPSLFPTLRSLAAAAAATTISTAVYSSSTLCPSHEGLRVFITGGLRIDDS 57

The following BLAST results are available for this feature:

BLAST of Cucsat.G13832 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13832 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54247.1	1.52e-27	100.00	hypothetical protein Csa_017878 [Cucumis sativus]	[more]
TYK23520.1	4.98e-19	84.21	hypothetical protein E5676_scaffold500G00240 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G13832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0X2	7.37e-28	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295510 PE=4 SV=1	[more]
A0A5D3DJF8	2.41e-19	84.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13832.T2	Cucsat.G13832.T2	mRNA
Cucsat.G13832.T1	Cucsat.G13832.T1	mRNA
Cucsat.G13832.T3	Cucsat.G13832.T3	mRNA
Cucsat.G13832.T4	Cucsat.G13832.T4	mRNA