Cucsat.G13706 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13706
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Expansin
Location	ctg184: 1253762 .. 1255936 (-)
RNA-Seq Expression	Cucsat.G13706
Synteny	Cucsat.G13706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAGACAGTGGGTTTGTTTGTTTGGTTTTTGATTCCCATTCCCACACTCTCTCCTTTTCCTCCTCCATAAGTACCCCTTCTGCTTCCCTCCCATTTTCCATTCCCTTAACCTTCAACCCTCAAACTCATTTCCCCTCTCCTCTCTCCTCTCTCCTCTCTCCTCTCTTCCTCCATGGCTTCTTCTCTTTCTCTCCTCTTCTCCCTCTTCCTCTCCTCCCTCTTTCTCCTCTCTCACGCCAGAATCCCTGGCGTCTACTCGGGCGGCCCCTGGCAGGACGCTCATGCCACCTTCTACGGCGGCAGCGATGCCTCTGGAACCATGGGTATCTCCCTTATCCTTTTTTTTCTTACCACATTTTCTTTTTTGGGTTTCTTTCTCTGATTTCTCTGTTTTTTCAGGTGGTGCTTGTGGGTATGGTAATCTCTACAGCCAGGGCTATGGCGTCAACACAGCTGCTCTCAGTACTGCTCTTTTCAACAATGGCTTAAGCTGTGGTGCTTGCTTTGAGATCAAGTGTGCTAATGACCCTCGATGGTGCCATCCCGGTAGCCCTTCTATTTTCATTACGGCTACCAATTTTTGTCCCCCTAATTTTGCTCTTCCTAATGACAATGGTGGTTGGTGTAACCCTCCTCGCACTCATTTCGACCTTGCTATGCCTATGTTCCTCAAGATAGCTGAGTACCGAGCTGGAATTGTACCCGTCTCTTACCGCCGGTGAGTGTGCTTTGCTCTCTGTTCTTACTTAATTGTCGTTTGATTTCTCTAATGGGGTTTCATCGTTCCCGTAAGGAATTTGGTTTGTTTGGCAAAAGCAAGGCCAAGTTGAAAGGAAATCTCCATTTCCATTTTTGGACCAGATCTGAAAATTTAACCTCTTAATTATCCTGCATAATTCTTTTGCTCTGTTTCCATATTTGAGATTTTTTAGGATCTGTTTCTCATATAAATGTTGAAATTATCATCTAGAGAATGAAGTGGCATTCCTAAACTGCCCTTAGTGGGATATTGTTTTTTTTATTAACAAAGAACTAAATATTTAATAGATTTTCTTTTATTTTTTAAAATGTTACTATACCTCACACATATTTGCCAAATATATATATATATATATATATATATATTGTTGCAATCTAGAAAATGTTAACATTATTTTATTATCATATTTTTTCTTTTGTTATTTTTGCAGACTCCTCTTCCTTGTATAATAATATAACACATTAGAATTCCTAAAGCAACGAAATTAATCATATAGCTAATAATAATAATAAATAATTTTTCTATTTTTGTTTTGTATTATTACAGGGTGCCATGTAGGAAACAAGGAGGAATCAGGTTCACAATCAACGGTTTCCGTTACTTCAATTTGGTATTAATCACTAACGTAGCCGGTGCAGGAGATATCGTGAAGGTTAGCGTAAAAGGATCAAACACCGGTTGGATGAGCATGAGCCGTAACTGGGGCCAAAATTGGCAATCCAACGCTGTTTTAGTGGGTCAGACCCTTTCCTTCCGCCTCACCGGCAGTGACCGTAGAACTTCAACTTCGTGGAACGTGGCACCTTCTAATTGGCAGTTTGGTCAGACATTCACCGGAAAGAATTTCCGCATTTGAAATTCCCTCCTTTTTTCTTTTTTTTTTTTAATCTTTTTTCAAAATTTTCCTTCTTATTTACCCGGGAAAGTTTTGGAGTAGTGGGGAAGAGGTAGAAGTTAAAAAAGTAGACGGTCACAGTGGGGTCTTTTTTAAAATGTTATAGCAATTACAAGTGTGTAATTCTGAATCCTAGTGTAGGAAAAGTTACTGAGGTGGTGGTAACTACTTACTTTTACTTTTTCTTTTACCTTGTTTTGTTTTTGGTTTGTCTGTTGGGTGTGGTTTTATGTTAGGTAGCGGTGGTGAGTTTGATAATTACCGCTGTGTAGGGGAGGCTGAAGTGGCTGCAATGGTAAATGTGTAGCCCGCAGCATTTTACTACTACATATAGTAAAAGTTATTATGTTATATGAAATGTTGTTACTATTTCAAAGAATTGTACTTGTTTGGAAGTGTTCTTTTTAATAATGTCTTCAAGATGACCTTTTTGCTTATTGAATGATGTTGAAAATGTAATTTGATTTGGGAAGACAATATACTTGTGGAGATAGGATTTGAAATTACAACATGTTTAAG

Coding sequence (CDS)

ATGGCTTCTTCTCTTTCTCTCCTCTTCTCCCTCTTCCTCTCCTCCCTCTTTCTCCTCTCTCACGCCAGAATCCCTGGCGTCTACTCGGGCGGCCCCTGGCAGGACGCTCATGCCACCTTCTACGGCGGCAGCGATGCCTCTGGAACCATGGGTGGTGCTTGTGGGTATGGTAATCTCTACAGCCAGGGCTATGGCGTCAACACAGCTGCTCTCAGTACTGCTCTTTTCAACAATGGCTTAAGCTGTGGTGCTTGCTTTGAGATCAAGTGTGCTAATGACCCTCGATGGTGCCATCCCGGTAGCCCTTCTATTTTCATTACGGCTACCAATTTTTGTCCCCCTAATTTTGCTCTTCCTAATGACAATGGTGGTTGGTGTAACCCTCCTCGCACTCATTTCGACCTTGCTATGCCTATGTTCCTCAAGATAGCTGAGTACCGAGCTGGAATTGTACCCGTCTCTTACCGCCGGGTGCCATGTAGGAAACAAGGAGGAATCAGGTTCACAATCAACGGTTTCCGTTACTTCAATTTGGTATTAATCACTAACGTAGCCGGTGCAGGAGATATCGTGAAGGTTAGCGTAAAAGGATCAAACACCGGTTGGATGAGCATGAGCCGTAACTGGGGCCAAAATTGGCAATCCAACGCTGTTTTAGTGGGTCAGACCCTTTCCTTCCGCCTCACCGGCAGTGACCGTAGAACTTCAACTTCGTGGAACGTGGCACCTTCTAATTGGCAGTTTGGTCAGACATTCACCGGAAAGAATTTCCGCATTTGA

Protein sequence

MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPNDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWNVAPSNWQFGQTFTGKNFRI

Homology

[Close]

BLAST of Cucsat.G13706 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 2.8e-132
Identity = 220/259 (84.94%), Postives = 239/259 (92.28%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MA  L++LF+ F+  LF L+ ARIPG+YSGG WQ+AHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAIKLAILFTTFV--LFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYG NTAALSTALFNNG+SCGACFE+KCANDP+WCH GSPSI ITATNFCPPN A P+
Sbjct: 61  SQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPS 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPR HFDLAMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVL
Sbjct: 121 DNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIV+ SVKGS TGWMS+SRNWGQNWQSNAVLVGQ LSFR+TGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 260
           + PSNWQFGQTF GKNFR+
Sbjct: 241 MVPSNWQFGQTFVGKNFRV 257

[Close]

BLAST of Cucsat.G13706 vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 461.1 bits (1185), Expect = 8.4e-129
Identity = 211/255 (82.75%), Postives = 239/255 (93.73%), Query Frame = 0


Query: 5   LSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYSQGY 64
           L L+ S+ L+++  LS ARIPGVY+GG W+ AHATFYGGSDASGTMGGACGYGNLYSQGY
Sbjct: 4   LGLVLSV-LTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGY 63

Query: 65  GVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPNDNGG 124
           GVNTAALSTALFNNG SCGACFE+KCA+DP+WCH GSPSIFITATNFCPPNFA P+DNGG
Sbjct: 64  GVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGG 123

Query: 125 WCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNV 184
           WCNPPR HFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNLVL+TNV
Sbjct: 124 WCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNV 183

Query: 185 AGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWNVAPS 244
           AGAG+IV++ VKG++T WM+MSRNWGQNWQSN+VLVGQ+LSFR+T SDRR+STSWN+AP+
Sbjct: 184 AGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPA 243

Query: 245 NWQFGQTFTGKNFRI 260
           NW+FGQTF GKNFR+
Sbjct: 244 NWKFGQTFMGKNFRV 257

[Close]

BLAST of Cucsat.G13706 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 6.7e-126
Identity = 208/255 (81.57%), Postives = 229/255 (89.80%), Query Frame = 0


Query: 5   LSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYSQGY 64
           L  +F LFL  L   + A IP V+SGG WQ AHATFYGG+DASGTMGGACGYGNLYSQGY
Sbjct: 8   LLTIFPLFL--LLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGY 67

Query: 65  GVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPNDNGG 124
           G NTAALST+LFN+G SCGACFEIKC NDP+WCHPG+PS+F+TATNFCPPN A P+DNGG
Sbjct: 68  GTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGG 127

Query: 125 WCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNV 184
           WCNPPR+HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVLITNV
Sbjct: 128 WCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNV 187

Query: 185 AGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWNVAPS 244
           AGAGDI + SVKGS TGWMS++RNWGQNWQSNAVLVGQ+LSFR+T SDRRTSTSWN+APS
Sbjct: 188 AGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPS 247

Query: 245 NWQFGQTFTGKNFRI 260
           NWQFGQTF GKNFR+
Sbjct: 248 NWQFGQTFVGKNFRV 260

[Close]

BLAST of Cucsat.G13706 vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 8.7e-126
Identity = 209/258 (81.01%), Postives = 231/258 (89.53%), Query Frame = 0


Query: 2   ASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYS 61
           A  + L  ++  S L   ++A+IPGVYSGGPWQ+AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 5   AFRVGLWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYS 64

Query: 62  QGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPND 121
           QGYGVNTAALSTALFNNG SCGACFEIKC +DPRWC PG+PSI +TATNFCPPNFA P+D
Sbjct: 65  QGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSD 124

Query: 122 NGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 181
           +GGWCNPPR HFDLAMPMFLKI  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVL+
Sbjct: 125 DGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLV 184

Query: 182 TNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWNV 241
           TNVAGAGDI  VSVKGS T W+ MSRNWGQNWQSNAVL+GQ+LSFR+T SDRR+STSWNV
Sbjct: 185 TNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNV 244

Query: 242 APSNWQFGQTFTGKNFRI 260
           AP+ WQFGQTF+GKNFR+
Sbjct: 245 APATWQFGQTFSGKNFRV 262

[Close]

BLAST of Cucsat.G13706 vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-125
Identity = 206/239 (86.19%), Postives = 218/239 (91.21%), Query Frame = 0


Query: 23  RIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSC 82
           RIPG Y GG WQ AHATFYGGSDASGTMGGACGYGNLYSQGYGVN AALSTALFN+G SC
Sbjct: 26  RIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSC 85

Query: 83  GACFEIKCANDP--RWCHPGSPSIFITATNFCPPNFALPNDNGGWCNPPRTHFDLAMPMF 142
           GACFEIKC N P   WCHPGSPSI ITATNFCPPN+ALP+DNGGWCNPPR HFDLAMPMF
Sbjct: 86  GACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMF 145

Query: 143 LKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVKVSVKGSNT 202
           L IAEYRAGIVPVSYRRVPCRK+GG+RFTINGFRYFNLVLITNVAGAGDIV+ SVKG++T
Sbjct: 146 LHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTST 205

Query: 203 GWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWNVAPSNWQFGQTFTGKNFRI 260
           GWM MSRNWGQNWQSN+VLVGQ LSFR+TGSDRRTSTSWN AP+ W FGQTF GKNFR+
Sbjct: 206 GWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264

[Close]

BLAST of Cucsat.G13706 vs. NCBI nr
Match: KGN54256.1 (hypothetical protein Csa_017936 [Cucumis sativus])

HSP 1 Score: 544 bits (1402), Expect = 1.14e-195
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFRI
Sbjct: 241 VAPSNWQFGQTFTGKNFRI 259

[Close]

BLAST of Cucsat.G13706 vs. NCBI nr
Match: NP_001295860.1 (expansin-A4 precursor [Cucumis sativus] >ACO07292.1 expansin 10 [Cucumis sativus])

HSP 1 Score: 540 bits (1392), Expect = 3.83e-194
Identity = 257/259 (99.23%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWC PPRTHFD AMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCTPPRTHFDFAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFRI
Sbjct: 241 VAPSNWQFGQTFTGKNFRI 259

[Close]

BLAST of Cucsat.G13706 vs. NCBI nr
Match: KAA0032657.1 (expansin-A4 precursor [Cucumis melo var. makuwa])

HSP 1 Score: 537 bits (1383), Expect = 9.04e-193
Identity = 254/259 (98.07%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSL  SSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLAFSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIV+VSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFR+TGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRVTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFR+
Sbjct: 241 VAPSNWQFGQTFTGKNFRV 259

[Close]

BLAST of Cucsat.G13706 vs. NCBI nr
Match: NP_001284471.1 (expansin-A4 precursor [Cucumis melo] >ABI94060.1 ripening-related expansin [Cucumis melo])

HSP 1 Score: 535 bits (1379), Expect = 3.68e-192
Identity = 253/259 (97.68%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSL  SSLFL SHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLAFSSLFLFSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIV+VSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFR+TGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRVTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFR+
Sbjct: 241 VAPSNWQFGQTFTGKNFRV 259

[Close]

BLAST of Cucsat.G13706 vs. NCBI nr
Match: XP_038880867.1 (expansin-A4-like [Benincasa hispida])

HSP 1 Score: 519 bits (1337), Expect = 1.01e-185
Identity = 246/260 (94.62%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 3   SSLSLLFSLFL---SSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNL 62
           +SLSLL S+     SSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNL
Sbjct: 2   ASLSLLCSIAFVSFSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNL 61

Query: 63  YSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALP 122
           YSQGYGVNTAALSTALFNNGLSCGACFEIKCANDP+WCHPGSPSIFITATNFCPPNFALP
Sbjct: 62  YSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPKWCHPGSPSIFITATNFCPPNFALP 121

Query: 123 NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 182
           NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 122 NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 181

Query: 183 LITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSW 242
           LITNVAGAGDIV+VSVKGSNTGWMSMSRNWGQNWQSN+VLVGQ LSFR+TGSDRRTSTSW
Sbjct: 182 LITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSW 241

Query: 243 NVAPSNWQFGQTFTGKNFRI 259
           NVAPSNWQFGQTFTGKNFR+
Sbjct: 242 NVAPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of Cucsat.G13706 vs. ExPASy TrEMBL
Match: A0A0A0L282 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_4G296100 PE=3 SV=1)

HSP 1 Score: 544 bits (1402), Expect = 5.54e-196
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFRI
Sbjct: 241 VAPSNWQFGQTFTGKNFRI 259

[Close]

BLAST of Cucsat.G13706 vs. ExPASy TrEMBL
Match: C3U028 (Expansin OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 540 bits (1392), Expect = 1.86e-194
Identity = 257/259 (99.23%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWC PPRTHFD AMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCTPPRTHFDFAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFRI
Sbjct: 241 VAPSNWQFGQTFTGKNFRI 259

[Close]

BLAST of Cucsat.G13706 vs. ExPASy TrEMBL
Match: A0A5A7STM7 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00420 PE=3 SV=1)

HSP 1 Score: 537 bits (1383), Expect = 4.38e-193
Identity = 254/259 (98.07%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSL  SSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLAFSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIV+VSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFR+TGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRVTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFR+
Sbjct: 241 VAPSNWQFGQTFTGKNFRV 259

[Close]

BLAST of Cucsat.G13706 vs. ExPASy TrEMBL
Match: Q06BI7 (Expansin OS=Cucumis melo OX=3656 GN=EXP1 PE=2 SV=1)

HSP 1 Score: 535 bits (1379), Expect = 1.78e-192
Identity = 253/259 (97.68%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60
           MASSLSLLFSL  SSLFL SHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MASSLSLLFSLAFSSLFLFSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPN 120

Query: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180
           DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL
Sbjct: 121 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWN 240
           ITNVAGAGDIV+VSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFR+TGSDRRTSTSWN
Sbjct: 181 ITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRVTGSDRRTSTSWN 240

Query: 241 VAPSNWQFGQTFTGKNFRI 259
           VAPSNWQFGQTFTGKNFR+
Sbjct: 241 VAPSNWQFGQTFTGKNFRV 259

[Close]

BLAST of Cucsat.G13706 vs. ExPASy TrEMBL
Match: A0A6J1CRN9 (Expansin OS=Momordica charantia OX=3673 GN=LOC111013641 PE=3 SV=1)

HSP 1 Score: 508 bits (1308), Expect = 1.19e-181
Identity = 240/258 (93.02%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 2   ASSLSLLFSLFLSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYS 61
           A SL  LFS F S LFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 3   ALSLLCLFSSFFS-LFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNLYS 62

Query: 62  QGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPND 121
           QGYGVNTAALSTALFNNG SCGACFEIKCANDP WCHPGSPSIF+TATNFCPPNFALPND
Sbjct: 63  QGYGVNTAALSTALFNNGFSCGACFEIKCANDPNWCHPGSPSIFVTATNFCPPNFALPND 122

Query: 122 NGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 181
           NGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPV+YRRV CRK+GGIRFTINGFRYFNLVLI
Sbjct: 123 NGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVAYRRVACRKEGGIRFTINGFRYFNLVLI 182

Query: 182 TNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSWNV 241
           +NVAGAGDIV+VSVKGSNT WMSMSRNWGQNWQSNAVLVGQ+LSFR+TGSDRRTSTSWNV
Sbjct: 183 SNVAGAGDIVRVSVKGSNTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNV 242

Query: 242 APSNWQFGQTFTGKNFRI 259
           APSNWQFGQTFTGKNFR+
Sbjct: 243 APSNWQFGQTFTGKNFRV 259

The following BLAST results are available for this feature:

BLAST of Cucsat.G13706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48818	2.8e-132	84.94	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q38865	8.4e-129	82.75	Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2	[more]
Q9M2S9	6.7e-126	81.57	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]
O80932	8.7e-126	81.01	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]
Q852A1	1.1e-125	86.19	Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1	[more]

BLAST of Cucsat.G13706 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54256.1	1.14e-195	100.00	hypothetical protein Csa_017936 [Cucumis sativus]	[more]
NP_001295860.1	3.83e-194	99.23	expansin-A4 precursor [Cucumis sativus] >ACO07292.1 expansin 10 [Cucumis sativus...	[more]
KAA0032657.1	9.04e-193	98.07	expansin-A4 precursor [Cucumis melo var. makuwa]	[more]
NP_001284471.1	3.68e-192	97.68	expansin-A4 precursor [Cucumis melo] >ABI94060.1 ripening-related expansin [Cucu...	[more]
XP_038880867.1	1.01e-185	94.62	expansin-A4-like [Benincasa hispida]	[more]

BLAST of Cucsat.G13706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L282	5.54e-196	100.00	Expansin OS=Cucumis sativus OX=3659 GN=Csa_4G296100 PE=3 SV=1	[more]
C3U028	1.86e-194	99.23	Expansin OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A5A7STM7	4.38e-193	98.07	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00420 PE=3 ...	[more]
Q06BI7	1.78e-192	97.68	Expansin OS=Cucumis melo OX=3656 GN=EXP1 PE=2 SV=1	[more]
A0A6J1CRN9	1.19e-181	93.02	Expansin OS=Momordica charantia OX=3673 GN=LOC111013641 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 90..101 score: 56.11 coord: 104..114 score: 83.94 coord: 123..140 score: 78.89 coord: 63..77 score: 90.0 coord: 140..153 score: 78.33
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 50..68 score: 76.97 coord: 72..90 score: 73.29 coord: 148..157 score: 42.79 coord: 32..47 score: 67.97
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 68..155 e-value: 6.4E-59 score: 211.7
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 51..157 score: 28.24062
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 20..157 e-value: 1.1E-44 score: 153.9
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 32..157
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 68..155 e-value: 2.1E-22 score: 79.2
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 12..157
None	No IPR available	PANTHER	PTHR31867:SF179	EXPANSIN	coord: 12..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13706.T1	Cucsat.G13706.T1	mRNA
Cucsat.G13706.T3	Cucsat.G13706.T3	mRNA
Cucsat.G13706.T2	Cucsat.G13706.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane