Cucsat.G13476 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13476
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	B-like cyclin
Location	ctg1838: 7378761 .. 7380875 (+)
RNA-Seq Expression	Cucsat.G13476
Synteny	Cucsat.G13476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTAAATGGAAGTTCAAACTGTACATTCGTCCCGCTCACGCTCCCTTTGACGCTCTCACTCTCTATATCTCTCTCTCTCTCTCTCATTTCTCACTCCCTCTCTCCCTCTCTCCAAACCTCAGCTTCTCCCGCTCTTTCTCTCTACCTCTCCTGAGAGCTCTTCCCACTGCCATTGGAGGCCGTGGAGCTCTCCTTTGAGCCGTAAGCGCTCTAGTTTTGTATTCATATATCTTCTTTTATTCAATCACTTTATCTGATCTATATTGCGCTCATTTACGACTACTTATTTTGTGCGTTTGAATGTTTCTTTCGAGGTTTTAGCCGTTTCGAAGCTGTGTTGAATGATGATTATTGTGGACGTTTCGATTTACTTGGTTTTGGTGCTGATTTCCGTTTTATTTTAAGTGTATTGAGAAATCTAGCTTATGTTTAGTACTCTGGCCTTTGTATTTCTGTTCAAATCATGCGGATTTTTTTAGTGTAGTGCATGATTTCATGCTGTCGCCTCTTTTTTTTTTTTTTTTTTCTTTTCGTTTTGGAAGAGGTGGAAATTTGATTTGATTTGATTTGATTTATCAAGTTTTTGGGAGGGAGTGTGTTTGCTTATTCCTCTGTTTCATGGGCGGCGACGGGGGAGGGTGAGGAGAAATAGGAAGATTTGTACGGCTGCGGATAAAAATGAGCATATTAGGTTTGCACCTCGAGCTCTTGCGATTTTTAATGTTTTTATATGCTTGTTTGAAAATGTAATAGGAAATCCAAGCGATCGTTCGTTTCCTTTTATTTGCTGCACTGTTACAACTGTATCACTTAGCCGTAGAATAGTGATGGATCGAGTGTCACTTTAGGGATGTTCTTTTGATTTTTCTCTATAAGTTTAAGAGGTGACGAGGGTCTTGTGCCATTGTTTTTTCATGAAGTCTTCGGTCCATTGCATGTTATTTTGCGTTTTGAATTAGCCCTTATCACGGTTTGCTTTTTCTGGATTTTCATCTGTGCCTCTAGTTTTGAATGTTTTCAGCTTAGTGACTGCTCTTGCACGTTTATCTTATGTTGGTTACGCAGCTTCAATGAAAACGAGCTTTGATCTACTGTAATGAACCCCCGGTCTTCTAGGGAGTAAAAAATGAGTAGGGAAAATGTTAATTTTCAAGTGGAAGAGCGCTCCGGCAGAATCACGAGAGCACGCGCAAAAGAGCTGAGCGAATCAGGAGGCATCTTATGTTCCTCAAAATCTTCTGGAGTTCAGAAGCATATTCTACGAGCTAACTCAAAAAGAATGGCATCTGATGATATTAAAACTTGTTCAGGCTCCTCCCATGGCCTTCCTAACAAAAGAAGAGCAGTGCTCAAGGATGTCACTAACATTTCCACCAAAGGTTTTGATAAGAATTGTAGAAATGTTTCTAATATTCAGGTAAAATTGAACCTTGGATTTTTTTCGTGTCGTTCCTTTTTGAAATGTTGATGTGACTCATGCTGGCGTTGATATAGGCATTTCTTTAACTGCTAATGACCACGGTTTGACAGGGTGCCAAAACAACAAGAAAAGTTTCTTCAAAAGCTAAGGCAAATGCGCCTTCTAATGCTCCTGAAGAAATTTTAGGTGCAGAAGAAGATGCAAACACAAGACTGGCTGAGGATTTGTCTAAAATAAGGGTGGTAGAATCTCGAGAGGTCTCTCTAAGAGAGACTTTGGACGAAAAAGAGAGAACAGAGCAAACTAGGAGTCTTACCAGCAGAGAATGTGGAGTTTCAGATATGATTCTCTCTGTATCTTCAGAAGAATCTATCCCTCAGCCAAATGGTATACAACATATCTCTAGAATTGCTTTTGTATGAATTATATATCTTTACTGTTTAACTGAACCATCAAATGACAATATCTGAATGCCTTCCATGTGTAGAATTTCCAGGCCAGGACCCTTTAAATATTATTATATAATCCTCATAATGGGGATTATCGCAAGTGCTGAACTGAAGAAGCATTCATGCCTTAACATCTTTTGTTATGATATTTTGTCGTGTGTTGAGAATTTTAACAACTCACTTCTTAAGATTTTATCCATGTAAAAGGCTGCGTTACAAATTATACTACACCATGTATAATAAGAGTGAATAGTGGCAAAAACAAATTGTGACATACTAACATTCCTTTAAAGTTTTTATGGAAAGACGTGATTTTGGGTGAACTATATTCTATTTCAAACTGCTTATGATTTATAAGAGGTAGACACCAGCCTGGGACTCGGCTATATCATTATTTCAGTGAGTCTGTAATTGTTGTCTTTGTGCATTATTGCTTTAACTTTGAAGAATGAACCGTTAATTCTAACCTTTTTGTTCTTTGTTCTTTTTCTTCTTTTGTGAAAAAAAAAATCTAAACTACAATTTAATGCATCTTCCTTATACAAGTAGTCTGCTGCAAGAACTGCACTGGAGGGTGAATAATTTCATTTTTTATTGTCCAAGTCAACTGCATCTCCAATGTTTGTGGAGCACAATTAATTAGCATAGCCGAATGTTCTAGTTTTGCAGGGAAATTGAACATTACAAAAATTTGGTTGGAAGTATGGTCATCATGGAGTAAACTGTTAATTATCGACTCTATTAATATCAGTACCCACATAATATCCGTGGTAATGGGAAAAAGATTTAAATAACCCACATAATAACGTTGTATACAAGCATTGTAGTCTTCAATTAGCAAGGAGTGAGAATGTTACAATTGTAAAATTTTGCAGAAAAATATATGGCACCTCAACGATCGGCAGCATTAAGGGATAGAGGTGTTATAGACATTGATTCAAACTCTAAATGTCTTCAATCATGCAGCACATATGCTCCAGACATATATGACAGGATACGTGTGACAGAGGTTTGTTGTTCACTATTTACCAACGTTACATTGCCATAGTTAACGTAGATGCCGTATTCATCTTAGAAAATTGGCTATAAACAAACATGTTATACAGTCGTACATTAGTAAAAAAATATATAGAAAGGGAAACACGAAACTTCTGAAATTATTGTCTCTCACTTGAAAATAGCTGAATTTCTATTGTCTCTTTCACTTGAAAGAAGATTTTCTAAACTAGAAAGGGAAATTCGAAACTTCTGAAATTATTAGGAAGTAGCTGAATTTCTTCTTTGAAAAAAATACTTAAGATGTTTGTGGTTTACATAAAAATTACTGACTGCCGCTTTTAGCTCACATGCAATGCAATACTAATACTTCTTTTCTACTCTTTTTAGCTTGATCAAAGGGCCTCAACTACCTACATGGAACAGTTGCAGCAAGATATCACTGCAAACATGCGAGGAATACTGGTTGATTGGCTTGTAGAGGTTCGTTCACCACTATTACGGCTTTACTTTGACCTAATTGTTATGATACATCGATGGACTTGGTTTGAGAGGCACCAAGTTGACAAAAATCCTTTTTCACGAGACAATAAAAAAGTTGTACTTTTTGACATTTTGTTCGCAATGGGAAAATTTATCGTGACATCACGTCAAATGCCAATTTTTGGCTATATGAATTGAAAATTTATCTTTTTGTTAAGCAAAAGTATTATTGGCAATGCCAATTTAATTGATAGTTAATTGTTTTTTCAGGTTTCTGAAGAATATAATCTAGTTTCAGATACACTCTATTTGACTGTTAATGTCATCGATCGATTCCTCTCTCAAAATTATATTGAAAAGAAGCGACTACAACTTGTTGGTGTTGCAAGCATGTTAATTGCATCGTAAGTTTTGACCATAATCTCATACTATGGAATAGTTCAAAGTATCCACTTTTTGTGTAGAATAAATAGTATGGATTTAGTATATTTTCCCTGGTCGTTAAGATAAATGTAGAATTTTCTAGTCAGTGTGCACACACACATGTTACCCGTGCATGCGTTAAGGTAAGTTTTAATTTCAAGTTCTAACTTCCATTGAATTGAACTTCAGTTCTGGTTTGGAAAGAATTGAAGAATTACATTTCATGATATTGTTGTAATAGGATCAAGTTGTTCATATCATATCAAAACCACTCTTCGTATTCCTAATGATGATTACTGCATTTCATAGAAACAGAAAATACCAAGTCATTTATGTAGTACGCATATTATACTCTAAACTCGGTTTCCTTTCACTTGAAGAAAATATGAAGAGATCTGTGCACCGCGAGTGGAAGATTTCTGCTTCATTACAGATAATACTTACACCAAAGGAGAGGTATACACTTAGCTTCTTGGTTTGTTTACATGTGTTGGTCTTGTTCTGATGCGTCATCAACATCTTTCTAATTCTCCTTGTCCATTACACCGTTTTCGTGCCTTAGAGTTACCGGTTCTTTCACTCCATTGAGTGATGTTAGGGGAAAAAATATATGGGAAGAATCAATGAGATAAATTTGCTCGTCAAACAAGAAAGAATGTCTGTTTTAGTACAAGAGAACCACTCGGTATTTAATAATGGTTTCGTATAAGGTGGTGATTGAGTACTACAAACATGAGTGTAGTTGTAGAAAAACTCAAAGCCTTCAAAGTTTTGTATCTTGTTAAAAAAAATCCCTGAGGCTTGAAATTTTTTCATACGAAATAATGGAAAATAAGAGTGTTTTTTGGAATTAGAGAGTCAATTTGAATATGAGAAGTATTCATATTTTTAGAAGAGACAAGTTGAACGTTAAATTTTTAACAAACATGAGTCGAATTCTGTGATGTTTCATCCTAGTTTCGATTGGATTGAAAACAATGTTCATGTCAGTCTAAAGTAAATCTGTTTGACCACCTTGTATCATTTTTGTTCCAAACAATTATTTGTTGGAAATTTCATTGGATACGAAACTTTCGAATATTCACGATTGAAGTTTTGTTAGCAGGTTGTAGAAATGGAGAGTGAAGTTTTGAACATACTGCACTTTCGGCTATCTGTTCCCACTACTAAGACATTTCTAAGGTATTATATTCTTCCCATTCTTCGATACCATAAGTTGGCACACATATGGACGTCTGTATTGACTTGGATATTTCAATCTTGCAGGAGATTTATACAATCAGCTCATGCTTCTTACAAGGTACTCTACTCTATATGTTGGTTATAATTTCTATATATTTTATGGACAGAAATTATATGAACAATGGGAGCTAATTGTGACATTTCAACTATTTTGCAATCAGGTTCCTTGCATTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGACTCTTGTTGAATACAGCTTCCTAAAGTTCCTTCCTTCTCTGATAGCCGCATCCGCCGTATTTCTTGCAAGATGGACACTTGACCAATCGGATCATCCGTGGGTCTGTGCTTCACTCCTAGGACATCTACCTTCTTTCTATCTCATCTCTCATCATGCATTTTTCGTAGTGATTTTCAAATGATTTAATGCACTTTTGTCACGATTAAATCACTTCATACCACACCTATAACCACTTAAAGTTAATTTAATGTTTAATTTGACACTTCTAAATATAATTTATATCGTCAAACCTAATTTTGAATGCATATTCGAGAGTAATCTTCGTCATTTCCCAAACATGCCCTTCTTCTCTCTCTAGTTTATTAATTTTGTTGTGCATTTCTTACAGAATCCAACTCTAGAGCACTATACCGGTTACAGCGTTTCTCAGCTGAAAACTGTTGTGCTTGCCCTCCATGACTTGCAACTAAACACCAGTGCTTCCTCCTTAAATGCCATACGTCAAAAGTATAAACAACCGAAGGTAAAAATGTCTCTCATTGTTTTGTTGAAACTGTTGGATCATACTGACATTTTGAAAATTATTCTAATAAATGATATTGTATGGTTGATTAGTTAAATTCATTCTTATCATTTTCAAAATCACTCATACACATGCTTTTAAAAAATTTAAGATTCAATTAATTTTGAATGATTAAAGAAATATTTGAGACTGGTTTTTGAACTGGGTGAAAGTGATTTTAAGAATTTTAAAAATCACTCCTAAACATGCTTTAAATCGAACATCCTTTTCGGTTGTTTAATTTGAAATCTGAATAGCTCGTTCCTGAATGTATATATTCAATGATCATGTCATATTAACTTTGCATTATAGACATAATCCTAATATTTTATTTTATTTTTATTTTTAATTTTTTTGGTGTATTCATCGTGGACTGGTCTACTGATAAAAAAAAGAGATCGTTTCAATAAATAGTTAAGATTTCAAGGGTTATTGGAATTCAAAGCCTTCACTACCATATCTAAACACGATCAGTTTTATAGTTTATACTACTGTGTCCAAGTTCTAAACATTTCGGTCTCTTTATTGATATCCATTCCCATTGCAGTTCAAATGCGTAGCTACATTAACGTCTACAAAATCAGTTCTATCACTATTTTGAAGAACAAGAATGATCCTACTCTTGCCAAGAGGATATATTCTGCAGGAGAATGTTTATGATTATTTCACTTGATCTGCCATTCTCTTTCTAACCTCCGCCAACTGCGATGGAGCTAAAAGAAGAGCAAAAGTCTTGAACTCAATGACTTGGAACCTCACTCTTCCTCCTCTCCACTCAATGGTTCTGGTACTTCCAGATATCTCTTTCTTTGTAATCTTATGTTTATGAGGTCATGACATGTACATTATAATTTTCCCTTAGCTTAAAATACTTTATTTATGATTCCTCCAAGCTCATTTGGAGGTAATGTTAATTGTTAGGTGACTTTAGCTCTTTTTCCCCCCTCTTTTGCCTGCTTTTATAGCAACTCTTTTGTTGTTGTAGCATTGGGTTGCTTCCTTTTAACATTGAAATTTTGTATAAAAAAAAACCTTAGGTTAGAAGAGCCTAAGTGAATAACATAGTTGAGCATCTCCTTAGACAACTCTCTCGTTATTTGTTCTTTGCATAATTGCAATCACAATCATTTAGGAGGTGTTTGAGATGCAAGCATCTTCC

Coding sequence (CDS)

ATGAGTAGGGAAAATGTTAATTTTCAAGTGGAAGAGCGCTCCGGCAGAATCACGAGAGCACGCGCAAAAGAGCTGAGCGAATCAGGAGGCATCTTATGTTCCTCAAAATCTTCTGGAGTTCAGAAGCATATTCTACGAGCTAACTCAAAAAGAATGGCATCTGATGATATTAAAACTTGTTCAGGCTCCTCCCATGGCCTTCCTAACAAAAGAAGAGCAGTGCTCAAGGATGTCACTAACATTTCCACCAAAGGTTTTGATAAGAATTGTAGAAATGTTTCTAATATTCAGGGTGCCAAAACAACAAGAAAAGTTTCTTCAAAAGCTAAGGCAAATGCGCCTTCTAATGCTCCTGAAGAAATTTTAGGTGCAGAAGAAGATGCAAACACAAGACTGGCTGAGGATTTGTCTAAAATAAGGGTGGTAGAATCTCGAGAGGTCTCTCTAAGAGAGACTTTGGACGAAAAAGAGAGAACAGAGCAAACTAGGAGTCTTACCAGCAGAGAATGTGGAGTTTCAGATATGATTCTCTCTGTATCTTCAGAAGAATCTATCCCTCAGCCAAATGAAAAATATATGGCACCTCAACGATCGGCAGCATTAAGGGATAGAGGTGTTATAGACATTGATTCAAACTCTAAATGTCTTCAATCATGCAGCACATATGCTCCAGACATATATGACAGGATACGTGTGACAGAGCTTGATCAAAGGGCCTCAACTACCTACATGGAACAGTTGCAGCAAGATATCACTGCAAACATGCGAGGAATACTGGTTGATTGGCTTGTAGAGGTTTCTGAAGAATATAATCTAGTTTCAGATACACTCTATTTGACTGTTAATGTCATCGATCGATTCCTCTCTCAAAATTATATTGAAAAGAAGCGACTACAACTTGTTGGTGTTGCAAGCATGTTAATTGCATCAAAATATGAAGAGATCTGTGCACCGCGAGTGGAAGATTTCTGCTTCATTACAGATAATACTTACACCAAAGGAGAGGTTGTAGAAATGGAGAGTGAAGTTTTGAACATACTGCACTTTCGGCTATCTGTTCCCACTACTAAGACATTTCTAAGGAGATTTATACAATCAGCTCATGCTTCTTACAAGGTTCCTTGCATTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGACTCTTGTTGAATACAGCTTCCTAAAGTTCCTTCCTTCTCTGATAGCCGCATCCGCCGTATTTCTTGCAAGATGGACACTTGACCAATCGGATCATCCGTGGAATCCAACTCTAGAGCACTATACCGGTTACAGCGTTTCTCAGCTGAAAACTGTTGTGCTTGCCCTCCATGACTTGCAACTAAACACCAGTGCTTCCTCCTTAAATGCCATACGTCAAAAGTATAAACAACCGAAGTTCAAATGCGTAGCTACATTAACGTCTACAAAATCAGTTCTATCACTATTTTGA

Protein sequence

MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTCSGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEEILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVSSEESIPQPNEKYMAPQRSAALRDRGVIDIDSNSKCLQSCSTYAPDIYDRIRVTELDQRASTTYMEQLQQDITANMRGILVDWLVEVSEEYNLVSDTLYLTVNVIDRFLSQNYIEKKRLQLVGVASMLIASKYEEICAPRVEDFCFITDNTYTKGEVVEMESEVLNILHFRLSVPTTKTFLRRFIQSAHASYKVPCIELEFLANYLAELTLVEYSFLKFLPSLIAASAVFLARWTLDQSDHPWNPTLEHYTGYSVSQLKTVVLALHDLQLNTSASSLNAIRQKYKQPKFKCVATLTSTKSVLSLF

Homology

[Close]

BLAST of Cucsat.G13476 vs. ExPASy Swiss-Prot
Match: Q39071 (Cyclin-A2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA2-1 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 9.8e-08
Identity = 63/182 (34.62%), Postives = 96/182 (52.75%), Query Frame = 0


Query: 9   QVEERSGRITRARAKELSESGGILCSSKSSGVQKH----ILRANSKRMASDDIKTCSGSS 68
           ++ + + R+TR+RAK L  S     +S S    KH    + R ++KRMASD+I  C+   
Sbjct: 20  KIRDNNVRVTRSRAKALGVS-----NSPSKPAFKHETKRVARPSNKRMASDNITVCN--- 79

Query: 69  HGLPNKRRAVLKDVTN------ISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAP 128
                KRRAVLKDVTN      IST+G  K C+     +G K T+++             
Sbjct: 80  ----QKRRAVLKDVTNTLAESIISTEGNVKACK-----RGGKETKQIE------------ 139

Query: 129 EEILGAEEDANTRLAEDLSKIRVVESREVSL--RETLD--EKERTEQTR--SLTSRECGV 175
           E+ L   +   ++LAEDLSKIR+VES + S   ++ +D  E++R++ T    +   + GV
Sbjct: 140 EDGLVDVDGEKSKLAEDLSKIRMVESLDASASKQKLVDCAEEDRSDVTDCVQIVDIDSGV 172

[Close]

BLAST of Cucsat.G13476 vs. ExPASy Swiss-Prot
Match: Q147G5 (Cyclin-A2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCA2-2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.6e-05
Identity = 59/188 (31.38%), Postives = 87/188 (46.28%), Query Frame = 0


Query: 2   SRENVN-FQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 61
           ++EN++   V+E   RITR+RAK+    G  +  +K S  Q+                  
Sbjct: 12  NKENISTSDVQESFVRITRSRAKKAMGRGVSIPPTKPSFKQQ------------------ 71

Query: 62  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 121
                    KRRAVLKDV+N S        R   NI+  +   K   KA A   +N+  +
Sbjct: 72  ---------KRRAVLKDVSNTSADIIYSELRKGGNIKANRKCLKEPKKA-AKEGANSAMD 131

Query: 122 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 181
           IL       ++LAEDLSKIR+ E+++VSL    DE E TEQ         GV +++  V 
Sbjct: 132 ILVDMHTEKSKLAEDLSKIRMAEAQDVSLSNFKDE-EITEQQED----GSGVMELLQVVD 166

Query: 182 SEESIPQP 189
            + ++  P
Sbjct: 192 IDSNVEDP 166

[Close]

BLAST of Cucsat.G13476 vs. ExPASy Swiss-Prot
Match: Q2QQ96 (Cyclin-A2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA2-1 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.9e-04
Identity = 42/141 (29.79%), Postives = 65/141 (46.10%), Query Frame = 0


Query: 14  SGRITRARAKELSESGGIL--CSSKSSGVQKHILRANSKRMASDDIKTCSGSSHGLPNKR 73
           SGRITRA+A       G     S  +   +K   +  +KR A D+I + S ++     KR
Sbjct: 17  SGRITRAQAAANRGRFGFAPSVSLPARTERKQTAKGKTKRGALDEITSASTATSAPQPKR 76

Query: 74  RAVLKDVTNISTKGFDKNCRNVSNI-QGAKTTRKV-----SSKAKANAPSNAPEEILGAE 133
           R VLKDVTNI      KNC   S + Q +K T++V       +     P   P  + G  
Sbjct: 77  RTVLKDVTNIGCANSSKNCTTTSKLQQKSKPTQRVKQIPSKKQCAKKVPKLPPPAVAGTS 136

Query: 134 EDANTRLAEDLSKIRVVESRE 147
              +++ +E+  K+ ++   E
Sbjct: 137 FVIDSKSSEETQKVELLAKAE 157

[Close]

BLAST of Cucsat.G13476 vs. NCBI nr
Match: KAE8651367.1 (hypothetical protein Csa_002643 [Cucumis sativus])

HSP 1 Score: 352 bits (902), Expect = 1.62e-118
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC
Sbjct: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
           SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE
Sbjct: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. NCBI nr
Match: XP_004136337.1 (cyclin-A2-2 [Cucumis sativus] >XP_011652496.1 cyclin-A2-2 [Cucumis sativus])

HSP 1 Score: 352 bits (902), Expect = 2.93e-117
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC
Sbjct: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
           SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE
Sbjct: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. NCBI nr
Match: XP_016903506.1 (PREDICTED: cyclin-A2-1 isoform X2 [Cucumis melo])

HSP 1 Score: 332 bits (851), Expect = 8.87e-111
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENV FQVEERS RITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIK+C
Sbjct: 1   MSRENVTFQVEERSSRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKSC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
            GSSHGLPNKRRAVLKDVTNISTK FDKNCRNVSNIQGAKTTRK+SSK KAN PSNAPEE
Sbjct: 61  PGSSHGLPNKRRAVLKDVTNISTKCFDKNCRNVSNIQGAKTTRKISSKVKANVPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVE REVSLRETLDEKERT QTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVEYREVSLRETLDEKERTAQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. NCBI nr
Match: XP_008466372.1 (PREDICTED: cyclin-A2-2 isoform X1 [Cucumis melo] >XP_008466373.1 PREDICTED: cyclin-A2-2 isoform X1 [Cucumis melo])

HSP 1 Score: 332 bits (851), Expect = 1.51e-109
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENV FQVEERS RITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIK+C
Sbjct: 1   MSRENVTFQVEERSSRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKSC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
            GSSHGLPNKRRAVLKDVTNISTK FDKNCRNVSNIQGAKTTRK+SSK KAN PSNAPEE
Sbjct: 61  PGSSHGLPNKRRAVLKDVTNISTKCFDKNCRNVSNIQGAKTTRKISSKVKANVPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVE REVSLRETLDEKERT QTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVEYREVSLRETLDEKERTAQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. NCBI nr
Match: KAA0038792.1 (cyclin-A2-2 isoform X1 [Cucumis melo var. makuwa] >TYK31413.1 cyclin-A2-2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (851), Expect = 3.47e-109
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENV FQVEERS RITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIK+C
Sbjct: 1   MSRENVTFQVEERSSRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKSC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
            GSSHGLPNKRRAVLKDVTNISTK FDKNCRNVSNIQGAKTTRK+SSK KAN PSNAPEE
Sbjct: 61  PGSSHGLPNKRRAVLKDVTNISTKCFDKNCRNVSNIQGAKTTRKISSKVKANVPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVE REVSLRETLDEKERT QTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVEYREVSLRETLDEKERTAQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. ExPASy TrEMBL
Match: A0A0A0LGQ2 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_3G878930 PE=3 SV=1)

HSP 1 Score: 352 bits (902), Expect = 1.42e-117
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC
Sbjct: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
           SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE
Sbjct: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. ExPASy TrEMBL
Match: A0A1S4E5J3 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103503800 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 4.30e-111
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENV FQVEERS RITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIK+C
Sbjct: 1   MSRENVTFQVEERSSRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKSC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
            GSSHGLPNKRRAVLKDVTNISTK FDKNCRNVSNIQGAKTTRK+SSK KAN PSNAPEE
Sbjct: 61  PGSSHGLPNKRRAVLKDVTNISTKCFDKNCRNVSNIQGAKTTRKISSKVKANVPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVE REVSLRETLDEKERT QTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVEYREVSLRETLDEKERTAQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. ExPASy TrEMBL
Match: A0A1S3CR95 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103503800 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 7.30e-110
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENV FQVEERS RITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIK+C
Sbjct: 1   MSRENVTFQVEERSSRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKSC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
            GSSHGLPNKRRAVLKDVTNISTK FDKNCRNVSNIQGAKTTRK+SSK KAN PSNAPEE
Sbjct: 61  PGSSHGLPNKRRAVLKDVTNISTKCFDKNCRNVSNIQGAKTTRKISSKVKANVPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVE REVSLRETLDEKERT QTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVEYREVSLRETLDEKERTAQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. ExPASy TrEMBL
Match: A0A5A7T5N9 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007220 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.68e-109
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           MSRENV FQVEERS RITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIK+C
Sbjct: 1   MSRENVTFQVEERSSRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKSC 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
            GSSHGLPNKRRAVLKDVTNISTK FDKNCRNVSNIQGAKTTRK+SSK KAN PSNAPEE
Sbjct: 61  PGSSHGLPNKRRAVLKDVTNISTKCFDKNCRNVSNIQGAKTTRKISSKVKANVPSNAPEE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVE REVSLRETLDEKERT QTRSLTSRECGVSDMILSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVEYREVSLRETLDEKERTAQTRSLTSRECGVSDMILSVS 180

Query: 181 SEESIPQPNE 190
           SEESIPQPNE
Sbjct: 181 SEESIPQPNE 190

[Close]

BLAST of Cucsat.G13476 vs. ExPASy TrEMBL
Match: A0A6J1C2P2 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111006862 PE=3 SV=1)

HSP 1 Score: 284 bits (726), Expect = 5.25e-91
Identity = 154/190 (81.05%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MSRENVNFQVEERSGRITRARAKELSESGGILCSSKSSGVQKHILRANSKRMASDDIKTC 60
           M+R+N+NFQ+EE SGRITRARAKELS++GGILCSSKSSG QKHILR NSKRMASDDIK  
Sbjct: 1   MTRDNINFQIEECSGRITRARAKELSDTGGILCSSKSSGDQKHILRVNSKRMASDDIKIS 60

Query: 61  SGSSHGLPNKRRAVLKDVTNISTKGFDKNCRNVSNIQGAKTTRKVSSKAKANAPSNAPEE 120
           S SS+GLPNKRRAVLKDVTNIS KG++KNC N SNIQGAK TR+VS+KAK N P N   E
Sbjct: 61  STSSNGLPNKRRAVLKDVTNISRKGYEKNCINASNIQGAKPTRRVSAKAKGNVPLNVSVE 120

Query: 121 ILGAEEDANTRLAEDLSKIRVVESREVSLRETLDEKERTEQTRSLTSRECGVSDMILSVS 180
           ILGAEEDANTRLAEDLSKIRVVESRE SLRET+DEKER  Q   LTSRECGVSDM+LSVS
Sbjct: 121 ILGAEEDANTRLAEDLSKIRVVESRETSLRETMDEKERLMQNTCLTSRECGVSDMMLSVS 180

Query: 181 SEESIPQPNE 190
           SEESIP+PNE
Sbjct: 181 SEESIPRPNE 190

The following BLAST results are available for this feature:

BLAST of Cucsat.G13476 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39071	9.8e-08	34.62	Cyclin-A2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA2-1 PE=2 SV=3	[more]
Q147G5	4.6e-05	31.38	Cyclin-A2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCA2-2 PE=2 SV=1	[more]
Q2QQ96	3.9e-04	29.79	Cyclin-A2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA2-1 PE=2 SV=1	[more]

BLAST of Cucsat.G13476 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651367.1	1.62e-118	100.00	hypothetical protein Csa_002643 [Cucumis sativus]	[more]
XP_004136337.1	2.93e-117	100.00	cyclin-A2-2 [Cucumis sativus] >XP_011652496.1 cyclin-A2-2 [Cucumis sativus]	[more]
XP_016903506.1	8.87e-111	94.74	PREDICTED: cyclin-A2-1 isoform X2 [Cucumis melo]	[more]
XP_008466372.1	1.51e-109	94.74	PREDICTED: cyclin-A2-2 isoform X1 [Cucumis melo] >XP_008466373.1 PREDICTED: cycl...	[more]
KAA0038792.1	3.47e-109	94.74	cyclin-A2-2 isoform X1 [Cucumis melo var. makuwa] >TYK31413.1 cyclin-A2-2 isofor...	[more]

BLAST of Cucsat.G13476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGQ2	1.42e-117	100.00	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_3G878930 PE=3 SV=1	[more]
A0A1S4E5J3	4.30e-111	94.74	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103503800 PE=3 SV=1	[more]
A0A1S3CR95	7.30e-110	94.74	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103503800 PE=3 SV=1	[more]
A0A5A7T5N9	1.68e-109	94.74	B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007220...	[more]
A0A6J1C2P2	5.25e-91	81.05	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111006862 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 261..345 e-value: 4.7E-25 score: 99.2 coord: 358..446 e-value: 3.4E-24 score: 96.4
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 255..344 e-value: 5.58358E-22 score: 88.0644
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 352..445 e-value: 4.39206E-18 score: 76.8936
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 354..477 e-value: 1.1E-42 score: 157.8
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 354..476 e-value: 5.2E-36 score: 123.3
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 225..352 e-value: 4.8E-41 score: 139.5
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 256..287
None	No IPR available	GENE3D	1.10.472.10		coord: 239..352 e-value: 6.6E-96 score: 322.1
None	No IPR available	GENE3D	1.10.472.10		coord: 225..473 e-value: 6.6E-96 score: 322.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..113
None	No IPR available	PANTHER	PTHR10177:SF434	CYCLIN-A2-4	coord: 50..484
IPR039361	Cyclin	PIRSF	PIRSF001771	Cyclin_A_B_D_E	coord: 33..483 e-value: 8.4E-126 score: 418.7
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 50..484
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 353..478
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 217..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13476.T1	Cucsat.G13476.T1	mRNA
Cucsat.G13476.T4	Cucsat.G13476.T4	mRNA
Cucsat.G13476.T3	Cucsat.G13476.T3	mRNA
Cucsat.G13476.T2	Cucsat.G13476.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity