Cucsat.G13399 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13399
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	tRNA-processing ribonuclease BN
Location	ctg1838: 5964355 .. 5966668 (+)
RNA-Seq Expression	Cucsat.G13399
Synteny	Cucsat.G13399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCAAAGAATGAGGAATTTAGACGATAATCTCCAACTGTCTTCTTCACTCTAAAACTTCGAACCATTCTCGGCGGGCTCAGGGTTTAAGGACACATTCCTCTTCTCTAAAACCCTAAAATTATGCACTCTCAATCCTTCTCTCCTGCCCTTACCTCCCCACTTCTCGGATTACAAGATGCCCGTTCTCGCTTTCATCCAATGGTTTGTACTTACCAATACTTAATTTTACGATTGTTCTCTCCGTCTCATTCATTTCTAACCTCATAGTTTTCTTCTCCAGCAACTGGGAAACCCAGTTTCGCCGAGGACACCACGAGTGCACCTTCAATTCTCATCCAAGTGTATGTTTCCAATTATTCTTGAATTTTCACCATCTTAATAGTAGTTAATTATTGAGTGAGAGTTGTCTGCTCCAATAATTTGGCAGGGGCTGTGTTGAAGAGGAAGAGATGGGCGTTCATGTGTGTGGCTGATTCTAACAAAAGCCCTCAGTTGGAATTATCTGGAGAGGAAAATCATGCTCTGTATGCTAGTAGATTGAATGGAGTGGAGCCCTTTCATGGGAAATGTGGTTCTGTCTCATTTCATGGCCTGACTCACCAGTTGGTAGAAGAGAGTAAATTGATGTCAGCTCCTTTTAGAGAAGAAAAGGGCTCTATCCTTTGGGTACTGGCTCCTGTTGCGTTCATCTCTTCTTTGATTCTTCCTCAAGTTTTCCTTGGCGGTCTAATTGAGGCTTTCTTCAAGAATAGAATTCTCGTAGGTATTTAAGATTCAACTTAGTTCATTTCTATATTGTAATTTCTGGGGTTTCCATATCTCTGGTGTTTGTTTCATATCACTCTGTGCAGTATTATTGGCAGCTGAGTTTATAATTGTTATCTAAACTAATAACACAATACAATTGCATGGTTCAAGCAGAAACTGTGAGTTCATTGGTGTTTGAAGTCTTGTTTTATGTTGGAGTTGCTACATTCCTGCTCGTTACCGAACGTGTTCAAAGACCATACTTACAATTCAGCTCGAAGAGATGGAGCCTCATTACAGGCCTTAGAGGATACTTGTCAACAACTTTCTTCATCGCTGGCTTTAAGGTTATAGCTCCACTATTGGCTGTCTTTGTAACTTGGCCGATGATTGGGCTGGCTGCGCTTGTTGCAGTGTTCCCATTTCTGGTTGGTTGTATCGTTCAGTTAGCATTTGAAACCCTACTTGATAGGTGTGGCTCCGCTTCTTGGCCACTTGTTCCAATCATTTTTGAGGTAGTTCCCTTATAGTTATTAACTCATCCCTCATTTCTTCCAAAGAGGAAACGATATATTTAACAAATTGAATCTACTTGCAGGTATATAGACTTTACCAGTTGACGAAAGCTTCCCATTTTATGGAGAGCTTGATGTTCGAATTGAAAGGTCTTCCGATGACTCCAGACTTGTTGGAGAAAAGTGGAGCTCTTTTTGCTATGATGACAACCTTTCAAATCTTAGGGGTGGTATGTCTCTGGTCGCTACTGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCCGTGGCAGAGAATTACTAGTGTTGTTACCTTCTGTACATTTTGTTACAAGTAGTTGTTGAACGTTGATCATAATTTGTTGTTCAATGAGCTCCATATTGTTGTATCCTAGCAATCAATGTCGACAACCTTTCTGATCACAAGCTGAAGGTTCAAATCTTAGGGGTGGTATGTCTCTGGTCGCTAATGAGAATTACTAGTGTTGTTACATTTTGTTACAGGTAGTTGAACATTTATCATAATTTGTTGTTCAATGGGCTCCATATTGTTGTATCCCTATCAATAGATATCGACAACCTTTCTGATCACAAGCTGAAGGAAAGATAGGACTTGACTACCTGTTTCACATGAGCAAGTTTTCTTCAGTTCTTGCTAGTATATATTACTTCTCTTCTATACAGTGATTTTCTTTGATCCGTTAGTATTATATCCTTTTACCCTTCTTGTTGTTGCTTTAGTTCGGGCAGAAGGTGATACCGGAGAGCCAAGATCACCATGCTGCTGATTTCATTTAATAATCCTTTCTCAGTGATACTCTCTGGGATCCACAAGGCTCTTTGACACCCAGAAAAACAGAGCCATGCAGGTTCCCTCTTTCCGCATTTTGTTGATAACTTAAAACATAACTTACTTAAGATGGTATTTATTGTTCTGTAATCGCATTCAAATTACATTGATACATCTTGTATAGAGCCACAAATTTAAGTGAATTTTTTATCATGCATATTTACAATTATGAATTTGTAGATATTTTGAAATGCGGAAAC

Coding sequence (CDS)

ATGCACTCTCAATCCTTCTCTCCTGCCCTTACCTCCCCACTTCTCGGATTACAAGATGCCCGTTCTCGCTTTCATCCAATGCAACTGGGAAACCCAGTTTCGCCGAGGACACCACGAGTGCACCTTCAATTCTCATCCAAGTGGGCTGTGTTGAAGAGGAAGAGATGGGCGTTCATGTGTGTGGCTGATTCTAACAAAAGCCCTCAGTTGGAATTATCTGGAGAGGAAAATCATGCTCTGTATGCTAGTAGATTGAATGGAGTGGAGCCCTTTCATGGGAAATGTGGTTCTGTCTCATTTCATGGCCTGACTCACCAGTTGGTAGAAGAGAGTAAATTGATGTCAGCTCCTTTTAGAGAAGAAAAGGGCTCTATCCTTTGGGTACTGGCTCCTGTTGCGTTCATCTCTTCTTTGATTCTTCCTCAAGTTTTCCTTGGCGGTCTAATTGAGGCTTTCTTCAAGAATAGAATTCTCGTAGAAACTGTGAGTTCATTGGTGTTTGAAGTCTTGTTTTATGTTGGAGTTGCTACATTCCTGCTCGTTACCGAACGTGTTCAAAGACCATACTTACAATTCAGCTCGAAGAGATGGAGCCTCATTACAGGCCTTAGAGGATACTTGTCAACAACTTTCTTCATCGCTGGCTTTAAGGTTATAGCTCCACTATTGGCTGTCTTTGTAACTTGGCCGATGATTGGGCTGGCTGCGCTTGTTGCAGTGTTCCCATTTCTGGTTGGTTGTATCGTTCAGTTAGCATTTGAAACCCTACTTGATAGGTGTGGCTCCGCTTCTTGGCCACTTGTTCCAATCATTTTTGAGGTATATAGACTTTACCAGTTGACGAAAGCTTCCCATTTTATGGAGAGCTTGATGTTCGAATTGAAAGGTCTTCCGATGACTCCAGACTTGTTGGAGAAAAGTGGAGCTCTTTTTGCTATGATGACAACCTTTCAAATCTTAGGGGTGGTATGTCTCTGGTCGCTACTGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCCGTGGCAGAGAATTACTAG

Protein sequence

MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMCVADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFREEKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLLVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAVFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMTPDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY

Homology

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BLAST of Cucsat.G13399 vs. NCBI nr
Match: XP_004147799.1 (uncharacterized protein LOC101207359 [Cucumis sativus] >KAE8651317.1 hypothetical protein Csa_001576 [Cucumis sativus])

HSP 1 Score: 669 bits (1726), Expect = 3.71e-242
Identity = 344/345 (99.71%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC
Sbjct: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VADSNKSPQLELSGEENHA+YASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE
Sbjct: 61  VADSNKSPQLELSGEENHAMYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL
Sbjct: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV
Sbjct: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT
Sbjct: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300

Query: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345
           PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY
Sbjct: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345

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BLAST of Cucsat.G13399 vs. NCBI nr
Match: XP_008466634.1 (PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo])

HSP 1 Score: 596 bits (1536), Expect = 3.33e-213
Identity = 308/345 (89.28%), Postives = 322/345 (93.33%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  LTSPLLGLQDA SRFH MQLGNPVSPR PRV L+FSSK  VLKRKRWAFMC
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VA+SNKSPQLE SGEENH LY SRLNGVEPFHGKCGSVSFHGL+HQLVEE KLMS+PFRE
Sbjct: 61  VANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           EKGSILWVLAP AFISSLILPQVFLGGLIEAFFKN ILVE VSSLVFEVLFYVGVATFLL
Sbjct: 121 EKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVEIVSSLVFEVLFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VT+RVQRPYLQFSSKRWSLITGLRGYLST FFIAGFKV+APL AV+VTWPMIGL ALVAV
Sbjct: 181 VTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFET LDR GSASWPLVPIIFEVYRLYQLTKA+HFMESLMF+++GLP +
Sbjct: 241 FPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESLMFQMRGLPTS 300

Query: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345
           P+LLEKSGALFAMM TFQILGVVCLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 PELLEKSGALFAMMITFQILGVVCLWSLMTFLLRLFPSRPVAENY 345

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BLAST of Cucsat.G13399 vs. NCBI nr
Match: XP_038905249.1 (uncharacterized protein LOC120091332 [Benincasa hispida])

HSP 1 Score: 566 bits (1458), Expect = 2.53e-201
Identity = 294/345 (85.22%), Postives = 310/345 (89.86%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  L SPLLG  DARSRFH MQL N VSPR   V L+FSSKW VLKRKR  FMC
Sbjct: 1   MQSQSFSRGLPSPLLGFPDARSRFHQMQLRNQVSPRRLGVQLEFSSKWDVLKRKRGTFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           V DSNK+PQLE SG ENH LY SRLNGVEPF GK GS+SFHGLTHQ+VEESKLMSAPFRE
Sbjct: 61  VTDSNKNPQLESSGVENHVLYVSRLNGVEPFRGKPGSISFHGLTHQMVEESKLMSAPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           +KGS+LWVLAP AFISSLILPQVFLGGLIEAFFKN ILVE VSSLVFE+LFYVGVATFLL
Sbjct: 121 DKGSLLWVLAPAAFISSLILPQVFLGGLIEAFFKNEILVEVVSSLVFEILFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VT+ VQRPYLQFSSKRWSLITGLRGYL+T FFIAGFKVIAPL AV+VTWPMIGL ALVAV
Sbjct: 181 VTDCVQRPYLQFSSKRWSLITGLRGYLTTAFFIAGFKVIAPLFAVYVTWPMIGLPALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFET LDR GSASWPLVPIIFEVYRLYQLTKA+HFME LMF+++GLP T
Sbjct: 241 FPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMERLMFQMRGLPTT 300

Query: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345
           PDLLEKSGALFAMM TFQ+LGVVCLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 PDLLEKSGALFAMMITFQVLGVVCLWSLMTFLLRLFPSRPVAENY 345

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BLAST of Cucsat.G13399 vs. NCBI nr
Match: TYK31605.1 (TRNA-processing ribonuclease BN [Cucumis melo var. makuwa])

HSP 1 Score: 550 bits (1417), Expect = 3.70e-195
Identity = 286/322 (88.82%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  LTSPLLGLQDA SRFH MQLGNPVSPR PRV L+FSSK  VLKRKRWAFMC
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VA+SNKSPQLE SGEENH LY SRLNGVEPFHGKCGSVSFHGL+HQLVEE KLMS+PFRE
Sbjct: 61  VANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           EKGSILWVLAP AFISSLILPQVFLGGLIEAFFKN ILVE VSSLVFEVLFYVGVATFLL
Sbjct: 121 EKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVEIVSSLVFEVLFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VT+RVQRPYLQFSSKRWSLITGLRGYLST FFIAGFKV+APL AV+VTWPMIGL ALVAV
Sbjct: 181 VTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFET LDR GSASWPLVPIIFEVYRLYQLTKA+HFMESLMF+++GLP +
Sbjct: 241 FPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESLMFQMRGLPTS 300

Query: 301 PDLLEKSGALFAMMTTFQILGV 322
           P+LLEKSGALFAMM TFQILGV
Sbjct: 301 PELLEKSGALFAMMITFQILGV 322

[Close]

BLAST of Cucsat.G13399 vs. NCBI nr
Match: KAA0051699.1 (uncharacterized protein E6C27_scaffold60G00840 [Cucumis melo var. makuwa])

HSP 1 Score: 541 bits (1393), Expect = 1.79e-191
Identity = 286/324 (88.27%), Postives = 299/324 (92.28%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  LTSPLLGLQDA SRFH MQLGNPVSPR PRV L+FSSK  VLKRKRWAFMC
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VA+SNKSPQLE SGEENH LY SRLNGVEPFHGKCGSVSFHGL+HQLVEE KLMS+PFRE
Sbjct: 61  VANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILV-ETVSSLVFEVLFYVGVATFL 180
           EKGSILWVLAP AFISSLILPQVFLGGLIEAFFKN ILV E VSSLVFEVLFYVGVATFL
Sbjct: 121 EKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVAEIVSSLVFEVLFYVGVATFL 180

Query: 181 LVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVA 240
           LVT+RVQRPYLQFSSKRWSLITGLRGYLST FFIAGFKV+APL AV+VTWPMIGL ALVA
Sbjct: 181 LVTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVA 240

Query: 241 VFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEV-YRLYQLTKASHFMESLMFELKGLP 300
           VFPFLVGCIVQLAFET LDR GSASWPLVPIIFEV YRLYQLTKA+HFMESLMF+++GLP
Sbjct: 241 VFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVVYRLYQLTKAAHFMESLMFQMRGLP 300

Query: 301 MTPDLLEKSGALFAMMTTFQILGV 322
            +P+LLEKSGALFAMM TFQILGV
Sbjct: 301 TSPELLEKSGALFAMMITFQILGV 324

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BLAST of Cucsat.G13399 vs. ExPASy TrEMBL
Match: A0A0A0LD62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854210 PE=4 SV=1)

HSP 1 Score: 645 bits (1665), Expect = 2.55e-233
Identity = 335/345 (97.10%), Postives = 336/345 (97.39%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC
Sbjct: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VADSNKSPQLELSGEENHA+YASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE
Sbjct: 61  VADSNKSPQLELSGEENHAMYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILV         VLFYVGVATFLL
Sbjct: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILV---------VLFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV
Sbjct: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT
Sbjct: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300

Query: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345
           PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY
Sbjct: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 336

[Close]

BLAST of Cucsat.G13399 vs. ExPASy TrEMBL
Match: A0A1S3CRR4 (uncharacterized protein LOC103503989 OS=Cucumis melo OX=3656 GN=LOC103503989 PE=4 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 1.61e-213
Identity = 308/345 (89.28%), Postives = 322/345 (93.33%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  LTSPLLGLQDA SRFH MQLGNPVSPR PRV L+FSSK  VLKRKRWAFMC
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VA+SNKSPQLE SGEENH LY SRLNGVEPFHGKCGSVSFHGL+HQLVEE KLMS+PFRE
Sbjct: 61  VANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           EKGSILWVLAP AFISSLILPQVFLGGLIEAFFKN ILVE VSSLVFEVLFYVGVATFLL
Sbjct: 121 EKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVEIVSSLVFEVLFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VT+RVQRPYLQFSSKRWSLITGLRGYLST FFIAGFKV+APL AV+VTWPMIGL ALVAV
Sbjct: 181 VTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFET LDR GSASWPLVPIIFEVYRLYQLTKA+HFMESLMF+++GLP +
Sbjct: 241 FPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESLMFQMRGLPTS 300

Query: 301 PDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345
           P+LLEKSGALFAMM TFQILGVVCLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 PELLEKSGALFAMMITFQILGVVCLWSLMTFLLRLFPSRPVAENY 345

[Close]

BLAST of Cucsat.G13399 vs. ExPASy TrEMBL
Match: A0A5D3E8K1 (tRNA-processing ribonuclease BN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00070 PE=4 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 1.79e-195
Identity = 286/322 (88.82%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  LTSPLLGLQDA SRFH MQLGNPVSPR PRV L+FSSK  VLKRKRWAFMC
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VA+SNKSPQLE SGEENH LY SRLNGVEPFHGKCGSVSFHGL+HQLVEE KLMS+PFRE
Sbjct: 61  VANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVATFLL 180
           EKGSILWVLAP AFISSLILPQVFLGGLIEAFFKN ILVE VSSLVFEVLFYVGVATFLL
Sbjct: 121 EKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVEIVSSLVFEVLFYVGVATFLL 180

Query: 181 VTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVAV 240
           VT+RVQRPYLQFSSKRWSLITGLRGYLST FFIAGFKV+APL AV+VTWPMIGL ALVAV
Sbjct: 181 VTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAV 240

Query: 241 FPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKGLPMT 300
           FPFLVGCIVQLAFET LDR GSASWPLVPIIFEVYRLYQLTKA+HFMESLMF+++GLP +
Sbjct: 241 FPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESLMFQMRGLPTS 300

Query: 301 PDLLEKSGALFAMMTTFQILGV 322
           P+LLEKSGALFAMM TFQILGV
Sbjct: 301 PELLEKSGALFAMMITFQILGV 322

[Close]

BLAST of Cucsat.G13399 vs. ExPASy TrEMBL
Match: A0A5A7UDY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00840 PE=4 SV=1)

HSP 1 Score: 541 bits (1393), Expect = 8.69e-192
Identity = 286/324 (88.27%), Postives = 299/324 (92.28%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSPRTPRVHLQFSSKWAVLKRKRWAFMC 60
           M SQSFS  LTSPLLGLQDA SRFH MQLGNPVSPR PRV L+FSSK  VLKRKRWAFMC
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFMC 60

Query: 61  VADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSAPFRE 120
           VA+SNKSPQLE SGEENH LY SRLNGVEPFHGKCGSVSFHGL+HQLVEE KLMS+PFRE
Sbjct: 61  VANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFRE 120

Query: 121 EKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILV-ETVSSLVFEVLFYVGVATFL 180
           EKGSILWVLAP AFISSLILPQVFLGGLIEAFFKN ILV E VSSLVFEVLFYVGVATFL
Sbjct: 121 EKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVAEIVSSLVFEVLFYVGVATFL 180

Query: 181 LVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAALVA 240
           LVT+RVQRPYLQFSSKRWSLITGLRGYLST FFIAGFKV+APL AV+VTWPMIGL ALVA
Sbjct: 181 LVTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVA 240

Query: 241 VFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEV-YRLYQLTKASHFMESLMFELKGLP 300
           VFPFLVGCIVQLAFET LDR GSASWPLVPIIFEV YRLYQLTKA+HFMESLMF+++GLP
Sbjct: 241 VFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVVYRLYQLTKAAHFMESLMFQMRGLP 300

Query: 301 MTPDLLEKSGALFAMMTTFQILGV 322
            +P+LLEKSGALFAMM TFQILGV
Sbjct: 301 TSPELLEKSGALFAMMITFQILGV 324

[Close]

BLAST of Cucsat.G13399 vs. ExPASy TrEMBL
Match: A0A6J1IHP8 (uncharacterized protein LOC111473667 OS=Cucurbita maxima OX=3661 GN=LOC111473667 PE=4 SV=1)

HSP 1 Score: 518 bits (1335), Expect = 7.56e-183
Identity = 273/349 (78.22%), Postives = 295/349 (84.53%), Query Frame = 0


Query: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSP----RTPRVHLQFSSKWAVLKRKRW 60
           M SQSFS  L   L+GLQD RSRF  MQLGN              LQF+SKW VLKRK  
Sbjct: 1   MQSQSFSRGLPPALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKNG 60

Query: 61  AFMCVADSNKSPQLELSGEENHALYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSA 120
           AFMCVADSN  PQLE SG+EN  LY S LNGVEP  GK GSVSFHGLTHQLVEE KLMSA
Sbjct: 61  AFMCVADSNGKPQLESSGKENRVLYVSALNGVEPSRGKSGSVSFHGLTHQLVEEGKLMSA 120

Query: 121 PFREEKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVA 180
           PFRE+KGS+LWVLAP  FISSLI PQVFLG LIEA+FK  ILVE V+SLVFEVLFYVGVA
Sbjct: 121 PFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVA 180

Query: 181 TFLLVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAA 240
            FLLVT+RVQ+PYLQFSSKRWSLITGLRGYL+T FFIAGFKV+APL AV+VTWPMIGL A
Sbjct: 181 AFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFIAGFKVVAPLFAVYVTWPMIGLPA 240

Query: 241 LVAVFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKG 300
           LVAVFPFLVGCIVQLAFET LDR GSA+WPLVPIIFEVYRLYQLTKASH ME LMF+++G
Sbjct: 241 LVAVFPFLVGCIVQLAFETHLDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRG 300

Query: 301 LPMTPDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345
           LP TP+LLEKSGA+F+MM TFQ+LGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 LPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 349

The following BLAST results are available for this feature:

BLAST of Cucsat.G13399 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147799.1	3.71e-242	99.71	uncharacterized protein LOC101207359 [Cucumis sativus] >KAE8651317.1 hypothetica...	[more]
XP_008466634.1	3.33e-213	89.28	PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo]	[more]
XP_038905249.1	2.53e-201	85.22	uncharacterized protein LOC120091332 [Benincasa hispida]	[more]
TYK31605.1	3.70e-195	88.82	TRNA-processing ribonuclease BN [Cucumis melo var. makuwa]	[more]
KAA0051699.1	1.79e-191	88.27	uncharacterized protein E6C27_scaffold60G00840 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G13399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD62	2.55e-233	97.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854210 PE=4 SV=1	[more]
A0A1S3CRR4	1.61e-213	89.28	uncharacterized protein LOC103503989 OS=Cucumis melo OX=3656 GN=LOC103503989 PE=...	[more]
A0A5D3E8K1	1.79e-195	88.82	tRNA-processing ribonuclease BN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UDY4	8.69e-192	88.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IHP8	7.56e-183	78.22	uncharacterized protein LOC111473667 OS=Cucurbita maxima OX=3661 GN=LOC111473667...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33918	OS01G0704200 PROTEIN	coord: 44..158
None	No IPR available	PANTHER	PTHR33918:SF4	PROTEIN, PUTATIVE-RELATED	coord: 44..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13399.T1	Cucsat.G13399.T1	mRNA
Cucsat.G13399.T2	Cucsat.G13399.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane