Cucsat.G13347 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13347
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	nucleolin 1
Location	ctg1838: 4961032 .. 4962896 (+)
RNA-Seq Expression	Cucsat.G13347
Synteny	Cucsat.G13347

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAACATTTGTACATTTCTAAAAACAAAAAAGTTATTCAAATTCAAATCTTCCCGTGAAAGTTTTACATTTTTAAAAGGAAAGTATGTAAAGTTATGAAACGACATGTCGTCAGGCGCTCGGTGGGCTACACGTCGTGTGGAACAGCTTGAAGACACCGGTCGGCTACGGCGGCGCCAAAAACAGAACGTTTCCGAAATTTTAGCTTTCAAATCCTTTAGAAGCGGCATTTAAGCGATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGGTTTTTTCCCGAAAACCTATATAATTTTCCTTATTAACTTTGGAGAAAAGTAATCGAAATCGTCACTTTTCCAGGTTGTTACCAAATTACGCCTAGGATTTTGATATCGAAAAGTAAAATTAGGCGATACTACTAAGTAAACAAACGATATAACTGTTTTAGGAGTTTCAAATTGCGAGTCAATGATACTGATTGTTCTTACTTTGGTTTTCTTGTAATGGGACACGAATTTGAATCCTGACTAATGTTTGCTCTCGAAAATCTTTCTAGTTTTCCTTAGAGAATTTAGAGAAAAATAATTGGAATCATCACTTTTCCAGATTGTTGCATATCCTGCGTAGGATTTTAATAGAATTAGCAGATACTTTAGAGAACAAACGAAACATTGTTTTCGAAGTTCCAAATTTTGAATCAATGATACTGATTGTTCTTACTGTTCTCATGTCAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGATGAAGCTAATTGTTATTGGCTGCTCTAACTTAGGCTTGTTCTAGAGAGTTTTGTCTTTGTACATTATTTACCTTTAGTTTCATGTTTGTGAAATATACAAGGATCAGTTTTGTGTTGTATCTCAAATTGTAGTTTGATAATCATCTTCAGAGGCCTTCTTGTAAGTTGTAGTACTCTTTTGTCTCGTGTTGTTAAGAAATTATTCGAGGAGGCCATGCGAGAGAAACCGTGAAAGTATCTTAAATTTATACTCAATAGTTAAGTATTAGCATGCAGATTTTCTTCATCAGACT

Coding sequence (CDS)

ATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGA

Protein sequence

MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFEVIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDYERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQRKAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED

Homology

[Close]

BLAST of Cucsat.G13347 vs. NCBI nr
Match: XP_004146848.1 (nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_000774 [Cucumis sativus])

HSP 1 Score: 572 bits (1474), Expect = 1.97e-205
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED
Sbjct: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295

[Close]

BLAST of Cucsat.G13347 vs. NCBI nr
Match: XP_008447630.1 (PREDICTED: nucleolin 1 [Cucumis melo] >TYK03672.1 nucleolin 1 [Cucumis melo var. makuwa])

HSP 1 Score: 538 bits (1385), Expect = 7.00e-192
Identity = 278/295 (94.24%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE FLDDE+DEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE-FLDDEDDEED 294

[Close]

BLAST of Cucsat.G13347 vs. NCBI nr
Match: KAA0036698.1 (nucleolin 1 [Cucumis melo var. makuwa])

HSP 1 Score: 537 bits (1384), Expect = 9.94e-192
Identity = 277/295 (93.90%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKL+LREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLILREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE FLDDE+DEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE-FLDDEDDEED 294

[Close]

BLAST of Cucsat.G13347 vs. NCBI nr
Match: XP_038898830.1 (protein PIF [Benincasa hispida])

HSP 1 Score: 488 bits (1256), Expect = 3.40e-172
Identity = 256/295 (86.78%), Postives = 269/295 (91.19%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRT+SRRHILIEAKTSEN+NGAP+EP VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPIEPTVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKGEMA GESFCVG QEPIWFELNKIAEFEE KQ FS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGEMALGESFCVGSQEPIWFELNKIAEFEERKQFFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDS DIDVSGIDPVKEFGFL MGHEFECYGNRVIRD KKWDWFLD P KDSDDD EDY
Sbjct: 121 RSSDSVDIDVSGIDPVKEFGFLAMGHEFECYGNRVIRDPKKWDWFLDEPRKDSDDD-EDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
            RKKKRGV GKRKKG NSDDEDWTDENEDAVEMITK +K +RPKYSTRSKDR+K  NDQ+
Sbjct: 181 GRKKKRGVKGKRKKGANSDDEDWTDENEDAVEMITKTKKFRRPKYSTRSKDRHKTPNDQK 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDE----EEEEFLDDEE 291
           KAA+SNK+Y+ EVEEDEDDETLGGFIVDDE DNVEQMDEDE    EEEEF DD+E
Sbjct: 241 KAARSNKDYDEEVEEDEDDETLGGFIVDDEEDNVEQMDEDEDEDEEEEEFSDDDE 294

[Close]

BLAST of Cucsat.G13347 vs. NCBI nr
Match: XP_022980683.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 465 bits (1196), Expect = 3.62e-163
Identity = 240/292 (82.19%), Postives = 261/292 (89.38%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFA KDRT+SR HILI+AKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIG+NPIWVRS KNGEIRTF+ SEKGEM PGESFC+GGQEP+WF+LNKIAEFEEG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD   KDSDD+ EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSDDE-EDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
            RK+K  V GKRKKG N+DDEDWTDENEDAVEMITK +K QRPKYSTRSKDRNK   DQ+
Sbjct: 181 GRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDRNKTHKDQK 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEED 292
           KAAKSNK+Y   VEEDEDDETLGGFIVDDEVDN E MDEDE+EEEF DD+ED
Sbjct: 241 KAAKSNKDY---VEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDKED 288

[Close]

BLAST of Cucsat.G13347 vs. ExPASy TrEMBL
Match: A0A0A0LFR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1)

HSP 1 Score: 572 bits (1474), Expect = 9.56e-206
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED
Sbjct: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295

[Close]

BLAST of Cucsat.G13347 vs. ExPASy TrEMBL
Match: A0A5D3BXV5 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE=4 SV=1)

HSP 1 Score: 538 bits (1385), Expect = 3.39e-192
Identity = 278/295 (94.24%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE FLDDE+DEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE-FLDDEDDEED 294

[Close]

BLAST of Cucsat.G13347 vs. ExPASy TrEMBL
Match: A0A1S3BHB4 (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 538 bits (1385), Expect = 3.39e-192
Identity = 278/295 (94.24%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE FLDDE+DEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE-FLDDEDDEED 294

[Close]

BLAST of Cucsat.G13347 vs. ExPASy TrEMBL
Match: A0A5A7T1L8 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00450 PE=4 SV=1)

HSP 1 Score: 537 bits (1384), Expect = 4.81e-192
Identity = 277/295 (93.90%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKL+LREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLILREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE FLDDE+DEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE-FLDDEDDEED 294

[Close]

BLAST of Cucsat.G13347 vs. ExPASy TrEMBL
Match: A0A6J1J012 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 1.75e-163
Identity = 240/292 (82.19%), Postives = 261/292 (89.38%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFA KDRT+SR HILI+AKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120
           VIG+NPIWVRS KNGEIRTF+ SEKGEM PGESFC+GGQEP+WF+LNKIAEFEEG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180
           RSSDSDDIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD   KDSDD+ EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSDDE-EDY 180

Query: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
            RK+K  V GKRKKG N+DDEDWTDENEDAVEMITK +K QRPKYSTRSKDRNK   DQ+
Sbjct: 181 GRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDRNKTHKDQK 240

Query: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEED 292
           KAAKSNK+Y   VEEDEDDETLGGFIVDDEVDN E MDEDE+EEEF DD+ED
Sbjct: 241 KAAKSNKDY---VEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDKED 288

The following BLAST results are available for this feature:

BLAST of Cucsat.G13347 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13347 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146848.1	1.97e-205	100.00	nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_000774 [Cucum...	[more]
XP_008447630.1	7.00e-192	94.24	PREDICTED: nucleolin 1 [Cucumis melo] >TYK03672.1 nucleolin 1 [Cucumis melo var....	[more]
KAA0036698.1	9.94e-192	93.90	nucleolin 1 [Cucumis melo var. makuwa]	[more]
XP_038898830.1	3.40e-172	86.78	protein PIF [Benincasa hispida]	[more]
XP_022980683.1	3.62e-163	82.19	protein BFR2 [Cucurbita maxima]	[more]

BLAST of Cucsat.G13347 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFR7	9.56e-206	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1	[more]
A0A5D3BXV5	3.39e-192	94.24	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE...	[more]
A0A1S3BHB4	3.39e-192	94.24	nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1	[more]
A0A5A7T1L8	4.81e-192	93.90	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00450 PE...	[more]
A0A6J1J012	1.75e-163	82.19	protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.200.20		coord: 3..110 e-value: 2.5E-13 score: 51.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..185
None	No IPR available	PANTHER	PTHR37733	SMAD/FHA DOMAIN-CONTAINING PROTEIN	coord: 1..294
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 5..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13347.T1	Cucsat.G13347.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding