Cucsat.G13316 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13316
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription termination factor MTERF4, chloroplastic
Location	ctg1838: 4342958 .. 4345262 (+)
RNA-Seq Expression	Cucsat.G13316
Synteny	Cucsat.G13316

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATGGAATTAACCTCAAAACTCATGAGTCTCAAAAAGAGCATATAGGCTTTGCTTATTTTATTTTATTTACTTTTGTGGAATATAGTCTTCCCCTGCTCCCCCTCTCCTCCGCCCTGTTCCTCTCGAAGAAGTTCAATTCCCATCGCCTGCCGCCGTCCACTACTCACCTTTCCTCCGGCTGCTAGGATACCGGTACGTCTCTCTCCATCTCTCAACCCAACCCACTACCTTGATTCTCGTCCAGTTTAGGGTTTCATTGTTATGCTCACATCGGCGACCATCTTTGGGTTTTTAGTACTTGCCGTTTCCACTGCTATTGCATTCGTGACAACTAAACTGAACTTTAGCCATCTATAATCACCTGTATATATTAATCTTACAAAATAAGTTTTTTTTTTTTAGATTGTGTAAGCAAATTCAGTTTTAGGGTTTATTGCCTTCCTTGCTGTTTCTGTTTCTTTTTATGTTTCTGTTACGTTGTCTGATTTGCGCTGCTTTGTTCTCTCCTTGGCAGTTTTGATTCAAATGACTGCATTGTCATTTCTGAGGCCAAGAAAATCTGCTATCTGCTCCTTGGTTTTTGGCATTTCCCCTCAAGTTTTTGAGAAATTTGGCTTATTCTGCCCCAAGATTGTTAAATCCTTCCTGAATCCATGTGCCCATCAATCGCACATTCAAAGCTTTTGGAGGGTTTTTCCATTAGGTGTACTGTATTCGACTCAATCCTCAAAACTTCCTGAATATGAAATGCCTACGGTCACATGGGGAGCTGTTCAAGGGCGAAAAGAAAAACTTGTGTCCCGTGTCATAATCTGTGACTACTTAAAGAGTTTGGGGATTGTTCCTGATGAATTAGAACACTTGGAGTTGCCTTCTACTGTTGAAGTCATGAGAGAGCGTGTCGAGTTTCTTCAGAAGTTAGGATTGACAATCGATGACATTAACGAGTTCCCATTAATTCTAGGCTGTAGTGTTCGCAAAAATATGATACCTGTTCTAGGTTACTTAGAGAAAATTGGGATTCCAAGGCCGAAACTTGGAGAATTTATTAAGAATTATCCACAGGTCTTGCATGCCAGTGTCATTGTTGAGCTTGCTCCCGTCATTAAGCTTCTTCGTGGGCTCGATGTCGAGAAAGAAGATATTGGATATGTCCTCCAGAAATACCCTGAGCTTCTGGGTTTCAAGCTTGAGGGGACAATGAGTACATCTGTTGCATATCTTGTGAGTATAGGTGTTAATCCGAGAGATATTGGACCAATGGTCACACAGTACCCGTTCTTTCTGGGGATGAGGGTTGGAACCATGATCAAGCCCCTTGTTGAGTTTATTGTTTCTCTAGGTTTGCCGAAGAAGATAGTAGCAAGAATGCTCGAGAAGCGAGCATACATACTTGGTTACGATCTTGGAGAGACAGTGAAACCCAATATAGATTGCTTGCTAAGCTTTGGGATTAGGAAGGAGCTGCTTCCTTCAGTGATTGCACAATATCCACTAATTCTGGGGTTGCCTTTGAAAGCTAAGTTGTCTTCTCAGCAATTCTTCTTTGACCTAAAGCTCAAGATTGATCCTGCAGGGTTCGCACAGGTGATAGAAAAAATGCCACAGATGGTCAGCCTTCACCAACATGTGATAATTAAACCTGCAGAATTCCTTCTTGAACGCGGTATAGCGTCCTCTGATGTAGCAAAGATGATCGTTCAATGCCCCCAGCTTCTCGCTTGTCGTGTACCACTCATGAAAAATAGTTACTACTTCTTCAAGTCTGATATGGGGAGGCCAATTAAAGAGCTTGTCGACTTCCCTGAATATTTTACATACAGTTTGGAATCGAGGATAAAACCAAGGTATCAGAGGCTGCAGAGCAAGGGAATCAGTTGTTCATTAAATTGGTTTCTCAACTGCAGTGATCAAAGGTTTGAGGAAAGACTGAAAGGTGAATTCATTGAGACAGAGAGCTTGAGGCCATCATTTTGTATGGGAGGGAGGTTAGAGCTGCCAAGTAATGAGACTATTGTGTCAGATGATGAGGATGAGTGTGATGAACAACTTCATAGACGCATTGTTTCTCTTTAGAAAATTCCCCCTTTTATTTACTCTATTCAATTCAATTCATCTTTTTGCTCTGTCTGTTTGGTTTGTGATCTTTTTTTGGTTTTATGTTTTTCTAAAACCAAATATACAAAGATAGTGGTGAGATTAAACATTGTATACTTGTTCTCACGAAGGATTTTCAAAAACTAACTCTTGAAAACAACCCTACCCTAAATTCAATGATATTTATTGTTCATTTAATTAATA

Coding sequence (CDS)

ATGACTGCATTGTCATTTCTGAGGCCAAGAAAATCTGCTATCTGCTCCTTGGTTTTTGGCATTTCCCCTCAAGTTTTTGAGAAATTTGGCTTATTCTGCCCCAAGATTGTTAAATCCTTCCTGAATCCATGTGCCCATCAATCGCACATTCAAAGCTTTTGGAGGGTTTTTCCATTAGGTGTACTGTATTCGACTCAATCCTCAAAACTTCCTGAATATGAAATGCCTACGGTCACATGGGGAGCTGTTCAAGGGCGAAAAGAAAAACTTGTGTCCCGTGTCATAATCTGTGACTACTTAAAGAGTTTGGGGATTGTTCCTGATGAATTAGAACACTTGGAGTTGCCTTCTACTGTTGAAGTCATGAGAGAGCGTGTCGAGTTTCTTCAGAAGTTAGGATTGACAATCGATGACATTAACGAGTTCCCATTAATTCTAGGCTGTAGTGTTCGCAAAAATATGATACCTGTTCTAGGTTACTTAGAGAAAATTGGGATTCCAAGGCCGAAACTTGGAGAATTTATTAAGAATTATCCACAGGTCTTGCATGCCAGTGTCATTGTTGAGCTTGCTCCCGTCATTAAGCTTCTTCGTGGGCTCGATGTCGAGAAAGAAGATATTGGATATGTCCTCCAGAAATACCCTGAGCTTCTGGGTTTCAAGCTTGAGGGGACAATGAGTACATCTGTTGCATATCTTGTGAGTATAGGTGTTAATCCGAGAGATATTGGACCAATGGTCACACAGTACCCGTTCTTTCTGGGGATGAGGGTTGGAACCATGATCAAGCCCCTTGTTGAGTTTATTGTTTCTCTAGGTTTGCCGAAGAAGATAGTAGCAAGAATGCTCGAGAAGCGAGCATACATACTTGGTTACGATCTTGGAGAGACAGTGAAACCCAATATAGATTGCTTGCTAAGCTTTGGGATTAGGAAGGAGCTGCTTCCTTCAGTGATTGCACAATATCCACTAATTCTGGGGTTGCCTTTGAAAGCTAAGTTGTCTTCTCAGCAATTCTTCTTTGACCTAAAGCTCAAGATTGATCCTGCAGGGTTCGCACAGGTGATAGAAAAAATGCCACAGATGGTCAGCCTTCACCAACATGTGATAATTAAACCTGCAGAATTCCTTCTTGAACGCGGTATAGCGTCCTCTGATGTAGCAAAGATGATCGTTCAATGCCCCCAGCTTCTCGCTTGTCGTGTACCACTCATGAAAAATAGTTACTACTTCTTCAAGTCTGATATGGGGAGGCCAATTAAAGAGCTTGTCGACTTCCCTGAATATTTTACATACAGTTTGGAATCGAGGATAAAACCAAGGTATCAGAGGCTGCAGAGCAAGGGAATCAGTTGTTCATTAAATTGGTTTCTCAACTGCAGTGATCAAAGGTTTGAGGAAAGACTGAAAGGTGAATTCATTGAGACAGAGAGCTTGAGGCCATCATTTTGTATGGGAGGGAGGTTAGAGCTGCCAAGTAATGAGACTATTGTGTCAGATGATGAGGATGAGTGTGATGAACAACTTCATAGACGCATTGTTTCTCTTTAG

Protein sequence

MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLGVLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLRPSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL

Homology

[Close]

BLAST of Cucsat.G13316 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 2.5e-124
Identity = 213/424 (50.24%), Postives = 309/424 (72.88%), Query Frame = 0


Query: 87  KEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVMRERVEFLQKLGLTIDDINEFPLIL 146
           KEK  +R  + ++L+ +GIVPDEL+ LELP T +VM+ERVEFL KLGLTI+DIN +PL+L
Sbjct: 112 KEKAANRAKVYEFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVL 171

Query: 147 GCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASVIVELAPVIKLLRGLDVEKED 206
           GCSV+KNM+PVL YL K+G+ +    EF++ YPQVLH+SV+++LAPV+K L+GLD++  D
Sbjct: 172 GCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSD 231

Query: 207 IGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPFFLGMRVGTMIKPLV 266
           +  VL++YPE+LGFKLEGTMSTSVAYLV IGV  R+IG ++T+YP  LGMRV  +IKPLV
Sbjct: 232 VPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLV 291

Query: 267 EFIVSLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCLLSFGIRKELLPSVIAQYPLIL 326
           E++  LG+P+   AR++EKR +ILG++L +TVKPN+  L  F +R+  LPS+IAQYP I+
Sbjct: 292 EYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEII 351

Query: 327 GLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMVSLHQHVIIKPAEFLLERGIASSD 386
           G+ LK KL +Q+      + ++P     +IE+MPQ VSL +  ++K  +FL + G +   
Sbjct: 352 GIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQ 411

Query: 387 VAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKELVDFPEYFTYSLESRIKPRYQRLQ 446
             +M++ CPQ+LA  + +MK S+ +F+ +M RP+++LVDFP +FTY LES +KPR++++ 
Sbjct: 412 TREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKII 471

Query: 447 SKGISCSLNWFLNCSDQRFEERLKGEFIETESLR---PSFCMGGRLELPSNETIVSDDED 506
            KGI CSL W LNCSD++FE+R+  + I+ E +     SF M   ++    E   S+ E+
Sbjct: 472 KKGIKCSLAWMLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEE 531

Query: 507 ECDE 508
           E D+
Sbjct: 532 EEDD 535

[Close]

BLAST of Cucsat.G13316 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.0e-117
Identity = 206/427 (48.24%), Postives = 296/427 (69.32%), Query Frame = 0


Query: 87  KEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVMRERVEFLQKLGLTIDDINEFPLIL 146
           +++   R  +  +L SLG+ P EL  LELP TV+VMRER EFL  LGLT +D+  +PL L
Sbjct: 68  RDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSLGLTQEDLAAYPLAL 127

Query: 147 GCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASVIVELAPVIKLLRGLDVEKED 206
           GCSVRKNM+PVL YL K+G+ R  L + ++ YPQVLHASV+V+LAPV+K L+G+DV   D
Sbjct: 128 GCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPTD 187

Query: 207 IGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPFFLGMRVGTMIKPLV 266
           +  VL++YPELLGFKLEGTMSTSVAYLV IGV  R +G ++T++P  LGMRVG +IKP V
Sbjct: 188 VPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFV 247

Query: 267 EFIVSLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCLLSFGIRKELLPSVIAQYPLIL 326
           E +  +GL +  +AR++EK+ Y+LG+ L E VKPNI+ L+  G+RKE L S++ QYP +L
Sbjct: 248 EHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVL 307

Query: 327 GLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMVSLHQHVIIKPAEFLLERGIASSD 386
           GL L+ KL +QQ  F+  + +    F +V+E+MPQ +SL +  ++K   FL   G   S 
Sbjct: 308 GLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLKHVNFLTACGFMLSQ 367

Query: 387 VAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKELVDFPEYFTYSLESRIKPRYQRLQ 446
           V+KM+V CPQLLA  + +M+ ++ +FK++M R ++ELV+FP +FTY +ES ++PR++ + 
Sbjct: 368 VSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVS 427

Query: 447 SKGISCSLNWFLNCSDQRFEERLKGEFIETESL--RPSFCMGGRLELPSNETIVSDDEDE 506
            KG++CSL W LNCSD +F+ER+K + I  E +    S  M   ++   +E     D  +
Sbjct: 428 RKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNASVDEVESEEYEDSDYGD 487

Query: 507 CDEQLHR 512
            D++  R
Sbjct: 488 SDDEFVR 494

[Close]

BLAST of Cucsat.G13316 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 6.6e-117
Identity = 200/381 (52.49%), Postives = 281/381 (73.75%), Query Frame = 0


Query: 99  YLKSLGIVPDELEHLELPSTVEVMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVL 158
           +L SLG+ P EL  LELP+TV+VMRERVEFL  L L+ +D+  +PL LGCSVRKNM+PVL
Sbjct: 89  FLASLGVDPGELAGLELPATVDVMRERVEFLHSLDLSNEDLAAYPLALGCSVRKNMVPVL 148

Query: 159 GYLEKIGIPRPKLGEFIKNYPQVLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELL 218
            YL K+G+ +  L + ++ YPQVLHASV+V+LAPV+K L+G+DV   D+  VL++YPELL
Sbjct: 149 DYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELL 208

Query: 219 GFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKI 278
           GFKLEGTMSTS+AYLV IGV  R +G ++T++P  LGMRVG +IKP VE +  +GL +  
Sbjct: 209 GFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLA 268

Query: 279 VARMLEKRAYILGYDLGETVKPNIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQ 338
           +AR++EK+ Y+LG+ L + VKPNI+ LL FG+RKE L  ++AQYP ILG+ L+ KL++QQ
Sbjct: 269 IARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQ 328

Query: 339 FFFDLKLKIDPAGFAQVIEKMPQMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLL 398
             F+  + +    F +VIE+MPQ +SL +  ++K   FL   G   S V+KM+V CPQLL
Sbjct: 329 SLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCGFLLSQVSKMVVACPQLL 388

Query: 399 ACRVPLMKNSYYFFKSDMGRPIKELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFL 458
           A  + +MK S+ +F+++M R ++ELV+FP +FTY LES ++PR++ +  KG +CSL W L
Sbjct: 389 ALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAWLL 448

Query: 459 NCSDQRFEERLKGEFIETESL 480
           NCSD +F+ER+K + I  E +
Sbjct: 449 NCSDAKFDERMKYDTIGIEEM 469

[Close]

BLAST of Cucsat.G13316 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.9e-35
Identity = 93/363 (25.62%), Postives = 177/363 (48.76%), Query Frame = 0


Query: 151 RKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASVIVELAPVIKLLRGLDVEKEDIGYV 210
           R+ +  ++ YLE  G+ R  +G  +   P++L  S + E+   +     + + + D G +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 211 LQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPFFLGMRVGTMIKPLVEFIV 270
           +  YP+++GF     M   + YL   G++  ++G ++   P  +G  +    KPLV++  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 271 SLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCLLSFGIRKELLPSVIAQYPLILGLPL 330
            LG+PK+ + R+L  +  +   DL +T+ P +  L   GI  E + +++ ++P +L   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 331 KAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMVSLHQHVIIKP-AEFLLERGIASSDVAK 390
             K+     F   +  +      +VI   P ++       ++P   + +  GI    + +
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 391 MIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKELVDFPEYFTYSLESRIKPRYQRLQSKG 450
           MI   P LL   V  ++  Y + +  M RP+++L++FP +F+YSLE RI PR+  +    
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 451 ISCSLNWFLNCSDQRFEERLKGEFIETESLRPSFCMGGRLELPSNETIVSDDE----DEC 509
           ++  L + L C+D+ FE R++ +    E       +      PS+E I SD E    DE 
Sbjct: 578 VNFKLRYMLACTDEEFERRVRDKVERRERFEAG--LDSEDSQPSDENI-SDQEIAFSDEA 636

[Close]

BLAST of Cucsat.G13316 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.8e-28
Identity = 75/322 (23.29%), Postives = 158/322 (49.07%), Query Frame = 0


Query: 153 NMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASVIVELAPVIKLLRGLDVEKEDIGYVLQ 212
           N   ++ +    G   P + + ++   Q+  A   V       L   + +++  + Y++ 
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 213 KYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSL 272
           + P++L  +L+  +   V  L S+G NPR++   +T++P  L   V   + PL+ F  +L
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 273 GLPKKIVARMLEKRAYILGYDLGETVKPNIDCLLSFGIRKE-LLPSVIAQYPLILGLPLK 332
           G+P+  + +M+     ++ Y +   +   +  L S G+ ++ ++  V+ + P ++G  + 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 333 AKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMVSLHQHVIIKP-AEFLLERGIASSDVAKM 392
            +L     F    + +   G   V+   PQ++    + I+KP  ++L E G   S +A M
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 393 IVQCPQLLACRVPLMKNSYY----FFKSDMGRPIKELVDFPEYFTYSLESRIKPRYQRLQ 452
           +   PQ+L   +  +KNS      F    MGR + E+  +PE+F + L+ +++ R++ ++
Sbjct: 245 VTGYPQIL---IKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVK 304

Query: 453 SKGISCSLNWFLNCSDQRFEER 469
              I CSL   L+C+ ++F E+
Sbjct: 305 KNNIDCSLREMLDCNTKKFHEK 323

[Close]

BLAST of Cucsat.G13316 vs. NCBI nr
Match: XP_004141131.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KGN59741.1 hypothetical protein Csa_001560 [Cucumis sativus])

HSP 1 Score: 1030 bits (2664), Expect = 0.0
Identity = 515/516 (99.81%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG
Sbjct: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE
Sbjct: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP
Sbjct: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAK+SSQQFFFDLKLKIDPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKMSSQQFFFDLKLKIDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI
Sbjct: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR
Sbjct: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480

Query: 481 PSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL 516
           PSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL
Sbjct: 481 PSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL 516

[Close]

BLAST of Cucsat.G13316 vs. NCBI nr
Match: XP_008464974.1 (PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo] >KAA0057178.1 transcription termination factor MTERF4 [Cucumis melo var. makuwa] >TYK18782.1 transcription termination factor MTERF4 [Cucumis melo var. makuwa])

HSP 1 Score: 984 bits (2543), Expect = 0.0
Identity = 492/519 (94.80%), Postives = 505/519 (97.30%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSAI S VFG+SPQVF+KFGLFCPKI KSFL+PCAH S+ QSFWRVF LG
Sbjct: 1   MTALSFLRPRKSAIFSFVFGVSPQVFQKFGLFCPKIAKSFLSPCAHLSNNQSFWRVFSLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYE+PTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPS VE
Sbjct: 61  VLYSTQSSKLPEYELPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSNVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPVIKLLRGLDVEK+DIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVIKLLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDL ETVKP
Sbjct: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLEETVKP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFG RKELLPS+IAQYP+ILGLPLKAK+SSQQFFFDLKLK+DPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGTRKELLPSIIAQYPVILGLPLKAKMSSQQFFFDLKLKVDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q+VSLHQHVI KPAEFLLERGI SSDVAKMIV+CPQLLACRVPLMKNSYYFFKSDMGRPI
Sbjct: 361 QIVSLHQHVITKPAEFLLERGIPSSDVAKMIVKCPQLLACRVPLMKNSYYFFKSDMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR
Sbjct: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480

Query: 481 PSFCMGGRLELPSNETIVSDDE---DECDEQLHRRIVSL 516
           PSFCMGGRLELPSNETIVSDDE   DECDEQLHRRIVSL
Sbjct: 481 PSFCMGGRLELPSNETIVSDDEVEEDECDEQLHRRIVSL 519

[Close]

BLAST of Cucsat.G13316 vs. NCBI nr
Match: XP_038905918.1 (transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038905920.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038905921.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038905922.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038905923.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038905924.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida])

HSP 1 Score: 961 bits (2484), Expect = 0.0
Identity = 480/513 (93.57%), Postives = 496/513 (96.69%), Query Frame = 0


Query: 7   LRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLGVLYSTQ 66
           +RPRKSA  SLV GI+ Q++EKFGLFCPKI KS+LNPCAHQSHIQSFWRVFPLGVLYSTQ
Sbjct: 1   MRPRKSAKFSLVLGIAHQIYEKFGLFCPKITKSYLNPCAHQSHIQSFWRVFPLGVLYSTQ 60

Query: 67  SSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVMRERV 126
           SSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVMRERV
Sbjct: 61  SSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVEVMRERV 120

Query: 127 EFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASV 186
           EFLQKLGLTIDDINEFPL+LGCSVRKN+IPVLGYLEKIGIPRPKLGEFIKNYPQVLHASV
Sbjct: 121 EFLQKLGLTIDDINEFPLMLGCSVRKNIIPVLGYLEKIGIPRPKLGEFIKNYPQVLHASV 180

Query: 187 IVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPM 246
           IVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPM
Sbjct: 181 IVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPM 240

Query: 247 VTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCLL 306
           VTQYP+FLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDL ETVKPNIDCLL
Sbjct: 241 VTQYPYFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLEETVKPNIDCLL 300

Query: 307 SFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMVSLH 366
           SFGIRKELLPSVIAQYP ILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQ+VSLH
Sbjct: 301 SFGIRKELLPSVIAQYPQILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQIVSLH 360

Query: 367 QHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKELVDF 426
           QHVIIKPAEF L RGI SSDVAKMI++CPQL+ACRV LMKNSYYFFKS+MGRPIKELV+F
Sbjct: 361 QHVIIKPAEFFLGRGIPSSDVAKMIIKCPQLVACRVELMKNSYYFFKSEMGRPIKELVNF 420

Query: 427 PEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLRPSFCMG 486
           PEYFTYSLESRIKPRY+RLQSKGI CSLNWFLNCSDQRFEERLKGEFIETESLRPSFCMG
Sbjct: 421 PEYFTYSLESRIKPRYERLQSKGIRCSLNWFLNCSDQRFEERLKGEFIETESLRPSFCMG 480

Query: 487 GRLELPSNETIVSDDE---DECDEQLHRRIVSL 516
           GRLELP NE IVSDDE   DECDE+LHRRIVSL
Sbjct: 481 GRLELPGNEIIVSDDEVEEDECDEKLHRRIVSL 513

[Close]

BLAST of Cucsat.G13316 vs. NCBI nr
Match: XP_022980596.1 (transcription termination factor MTERF4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 932 bits (2409), Expect = 0.0
Identity = 469/518 (90.54%), Postives = 492/518 (94.98%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSA  SLV GIS  ++E  GLFCPKI KSFLNPCAHQS IQSF RV PLG
Sbjct: 1   MTALSFLRPRKSAKFSLVLGISHHIYENLGLFCPKITKSFLNPCAHQSLIQSFCRVLPLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE
Sbjct: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPV+KLLRGLDVEK+DIGYVLQK+PELLG+KLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVVKLLRGLDVEKQDIGYVLQKHPELLGYKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYP+FL MRVGTMIKPLV+FIVSLGLPKKIVARMLEKRAYILGYDL ETV+P
Sbjct: 241 RDIGPMVTQYPYFLAMRVGTMIKPLVDFIVSLGLPKKIVARMLEKRAYILGYDLEETVRP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFGIRKELLPSVIA YP ILGLPLKAKLS+QQFFFDLKLKIDPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGIRKELLPSVIAHYPQILGLPLKAKLSAQQFFFDLKLKIDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q++SLHQHVI+KP EFLL RGI SSDVAKM+V+CPQL+ACRV LMKNSYYFFKS+MGRPI
Sbjct: 361 QILSLHQHVIMKPVEFLLGRGIPSSDVAKMVVKCPQLVACRVELMKNSYYFFKSEMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELV+FPEYFTYSLESRIKPRY+R+Q KGI CSLNWFLN S+QRFEERLKG+FIETESL 
Sbjct: 421 KELVEFPEYFTYSLESRIKPRYERVQRKGIRCSLNWFLNVSEQRFEERLKGDFIETESLG 480

Query: 481 PSFCMGGRLELPSNETIVSDDE-DECDEQ-LHRRIVSL 516
           PSFCMGGRLELP NETIVSDDE DECDEQ LHRRIVSL
Sbjct: 481 PSFCMGGRLELPGNETIVSDDEEDECDEQFLHRRIVSL 518

[Close]

BLAST of Cucsat.G13316 vs. NCBI nr
Match: XP_022930565.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 924 bits (2389), Expect = 0.0
Identity = 466/518 (89.96%), Postives = 489/518 (94.40%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSA  SLV GIS  ++E  GLFCPKI KSFLNPCAHQS IQSF RV PL 
Sbjct: 1   MTALSFLRPRKSAKFSLVLGISHHIYENLGLFCPKITKSFLNPCAHQSLIQSFCRVLPLS 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKL EYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE
Sbjct: 61  VLYSTQSSKLHEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPV+KLLRGLDVEKEDIGYVLQK+PELLG+KLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVVKLLRGLDVEKEDIGYVLQKHPELLGYKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYP+FL MRVGTMIKPLV+FIVSLGLPKKIVARMLEKRAYILGYDL ETV+P
Sbjct: 241 RDIGPMVTQYPYFLAMRVGTMIKPLVDFIVSLGLPKKIVARMLEKRAYILGYDLEETVRP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFGIRKELLPSVIA YP ILGLPLKAKLS+QQFFFDLKLKIDPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGIRKELLPSVIAHYPQILGLPLKAKLSAQQFFFDLKLKIDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q++ LHQHVI+KP EFLL RGI SSDVAKM+V+CPQL+ACRV LMKNSYYFFKS+MGRPI
Sbjct: 361 QILCLHQHVIMKPVEFLLGRGIPSSDVAKMVVKCPQLVACRVELMKNSYYFFKSEMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELV+FPEYFTYSLESRIKPRY+R+Q KGI CSLNWFLN S+QRFEERLKG+FIETESL 
Sbjct: 421 KELVEFPEYFTYSLESRIKPRYERVQRKGIRCSLNWFLNVSEQRFEERLKGDFIETESLG 480

Query: 481 PSFCMGGRLELPSNETIVSDDE-DECDEQ-LHRRIVSL 516
           PSFCMGGRLE+P NETIVSDDE DECDEQ LHRRIVSL
Sbjct: 481 PSFCMGGRLEVPGNETIVSDDEEDECDEQFLHRRIVSL 518

[Close]

BLAST of Cucsat.G13316 vs. ExPASy TrEMBL
Match: A0A0A0LI61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842630 PE=3 SV=1)

HSP 1 Score: 1030 bits (2664), Expect = 0.0
Identity = 515/516 (99.81%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG
Sbjct: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE
Sbjct: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP
Sbjct: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAK+SSQQFFFDLKLKIDPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKMSSQQFFFDLKLKIDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI
Sbjct: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR
Sbjct: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480

Query: 481 PSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL 516
           PSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL
Sbjct: 481 PSFCMGGRLELPSNETIVSDDEDECDEQLHRRIVSL 516

[Close]

BLAST of Cucsat.G13316 vs. ExPASy TrEMBL
Match: A0A5D3D5I6 (Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00900 PE=3 SV=1)

HSP 1 Score: 984 bits (2543), Expect = 0.0
Identity = 492/519 (94.80%), Postives = 505/519 (97.30%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSAI S VFG+SPQVF+KFGLFCPKI KSFL+PCAH S+ QSFWRVF LG
Sbjct: 1   MTALSFLRPRKSAIFSFVFGVSPQVFQKFGLFCPKIAKSFLSPCAHLSNNQSFWRVFSLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYE+PTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPS VE
Sbjct: 61  VLYSTQSSKLPEYELPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSNVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPVIKLLRGLDVEK+DIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVIKLLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDL ETVKP
Sbjct: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLEETVKP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFG RKELLPS+IAQYP+ILGLPLKAK+SSQQFFFDLKLK+DPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGTRKELLPSIIAQYPVILGLPLKAKMSSQQFFFDLKLKVDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q+VSLHQHVI KPAEFLLERGI SSDVAKMIV+CPQLLACRVPLMKNSYYFFKSDMGRPI
Sbjct: 361 QIVSLHQHVITKPAEFLLERGIPSSDVAKMIVKCPQLLACRVPLMKNSYYFFKSDMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR
Sbjct: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480

Query: 481 PSFCMGGRLELPSNETIVSDDE---DECDEQLHRRIVSL 516
           PSFCMGGRLELPSNETIVSDDE   DECDEQLHRRIVSL
Sbjct: 481 PSFCMGGRLELPSNETIVSDDEVEEDECDEQLHRRIVSL 519

[Close]

BLAST of Cucsat.G13316 vs. ExPASy TrEMBL
Match: A0A1S3CN78 (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502714 PE=3 SV=1)

HSP 1 Score: 984 bits (2543), Expect = 0.0
Identity = 492/519 (94.80%), Postives = 505/519 (97.30%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSAI S VFG+SPQVF+KFGLFCPKI KSFL+PCAH S+ QSFWRVF LG
Sbjct: 1   MTALSFLRPRKSAIFSFVFGVSPQVFQKFGLFCPKIAKSFLSPCAHLSNNQSFWRVFSLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYE+PTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPS VE
Sbjct: 61  VLYSTQSSKLPEYELPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSNVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPVIKLLRGLDVEK+DIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVIKLLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDL ETVKP
Sbjct: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLEETVKP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFG RKELLPS+IAQYP+ILGLPLKAK+SSQQFFFDLKLK+DPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGTRKELLPSIIAQYPVILGLPLKAKMSSQQFFFDLKLKVDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q+VSLHQHVI KPAEFLLERGI SSDVAKMIV+CPQLLACRVPLMKNSYYFFKSDMGRPI
Sbjct: 361 QIVSLHQHVITKPAEFLLERGIPSSDVAKMIVKCPQLLACRVPLMKNSYYFFKSDMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR
Sbjct: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480

Query: 481 PSFCMGGRLELPSNETIVSDDE---DECDEQLHRRIVSL 516
           PSFCMGGRLELPSNETIVSDDE   DECDEQLHRRIVSL
Sbjct: 481 PSFCMGGRLELPSNETIVSDDEVEEDECDEQLHRRIVSL 519

[Close]

BLAST of Cucsat.G13316 vs. ExPASy TrEMBL
Match: A0A6J1IU10 (transcription termination factor MTERF4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479919 PE=3 SV=1)

HSP 1 Score: 932 bits (2409), Expect = 0.0
Identity = 469/518 (90.54%), Postives = 492/518 (94.98%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSA  SLV GIS  ++E  GLFCPKI KSFLNPCAHQS IQSF RV PLG
Sbjct: 1   MTALSFLRPRKSAKFSLVLGISHHIYENLGLFCPKITKSFLNPCAHQSLIQSFCRVLPLG 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE
Sbjct: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPV+KLLRGLDVEK+DIGYVLQK+PELLG+KLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVVKLLRGLDVEKQDIGYVLQKHPELLGYKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYP+FL MRVGTMIKPLV+FIVSLGLPKKIVARMLEKRAYILGYDL ETV+P
Sbjct: 241 RDIGPMVTQYPYFLAMRVGTMIKPLVDFIVSLGLPKKIVARMLEKRAYILGYDLEETVRP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFGIRKELLPSVIA YP ILGLPLKAKLS+QQFFFDLKLKIDPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGIRKELLPSVIAHYPQILGLPLKAKLSAQQFFFDLKLKIDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q++SLHQHVI+KP EFLL RGI SSDVAKM+V+CPQL+ACRV LMKNSYYFFKS+MGRPI
Sbjct: 361 QILSLHQHVIMKPVEFLLGRGIPSSDVAKMVVKCPQLVACRVELMKNSYYFFKSEMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELV+FPEYFTYSLESRIKPRY+R+Q KGI CSLNWFLN S+QRFEERLKG+FIETESL 
Sbjct: 421 KELVEFPEYFTYSLESRIKPRYERVQRKGIRCSLNWFLNVSEQRFEERLKGDFIETESLG 480

Query: 481 PSFCMGGRLELPSNETIVSDDE-DECDEQ-LHRRIVSL 516
           PSFCMGGRLELP NETIVSDDE DECDEQ LHRRIVSL
Sbjct: 481 PSFCMGGRLELPGNETIVSDDEEDECDEQFLHRRIVSL 518

[Close]

BLAST of Cucsat.G13316 vs. ExPASy TrEMBL
Match: A0A6J1EX70 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436975 PE=3 SV=1)

HSP 1 Score: 924 bits (2389), Expect = 0.0
Identity = 466/518 (89.96%), Postives = 489/518 (94.40%), Query Frame = 0


Query: 1   MTALSFLRPRKSAICSLVFGISPQVFEKFGLFCPKIVKSFLNPCAHQSHIQSFWRVFPLG 60
           MTALSFLRPRKSA  SLV GIS  ++E  GLFCPKI KSFLNPCAHQS IQSF RV PL 
Sbjct: 1   MTALSFLRPRKSAKFSLVLGISHHIYENLGLFCPKITKSFLNPCAHQSLIQSFCRVLPLS 60

Query: 61  VLYSTQSSKLPEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120
           VLYSTQSSKL EYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE
Sbjct: 61  VLYSTQSSKLHEYEMPTVTWGAVQGRKEKLVSRVIICDYLKSLGIVPDELEHLELPSTVE 120

Query: 121 VMRERVEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180
           VMRERVEFLQKLGLTIDDINEFPL+LGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ
Sbjct: 121 VMRERVEFLQKLGLTIDDINEFPLMLGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQ 180

Query: 181 VLHASVIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNP 240
           VLHASVIVELAPV+KLLRGLDVEKEDIGYVLQK+PELLG+KLEGTMSTSVAYLVSIGVNP
Sbjct: 181 VLHASVIVELAPVVKLLRGLDVEKEDIGYVLQKHPELLGYKLEGTMSTSVAYLVSIGVNP 240

Query: 241 RDIGPMVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKP 300
           RDIGPMVTQYP+FL MRVGTMIKPLV+FIVSLGLPKKIVARMLEKRAYILGYDL ETV+P
Sbjct: 241 RDIGPMVTQYPYFLAMRVGTMIKPLVDFIVSLGLPKKIVARMLEKRAYILGYDLEETVRP 300

Query: 301 NIDCLLSFGIRKELLPSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMP 360
           NIDCLLSFGIRKELLPSVIA YP ILGLPLKAKLS+QQFFFDLKLKIDPAGFAQVIEKMP
Sbjct: 301 NIDCLLSFGIRKELLPSVIAHYPQILGLPLKAKLSAQQFFFDLKLKIDPAGFAQVIEKMP 360

Query: 361 QMVSLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPI 420
           Q++ LHQHVI+KP EFLL RGI SSDVAKM+V+CPQL+ACRV LMKNSYYFFKS+MGRPI
Sbjct: 361 QILCLHQHVIMKPVEFLLGRGIPSSDVAKMVVKCPQLVACRVELMKNSYYFFKSEMGRPI 420

Query: 421 KELVDFPEYFTYSLESRIKPRYQRLQSKGISCSLNWFLNCSDQRFEERLKGEFIETESLR 480
           KELV+FPEYFTYSLESRIKPRY+R+Q KGI CSLNWFLN S+QRFEERLKG+FIETESL 
Sbjct: 421 KELVEFPEYFTYSLESRIKPRYERVQRKGIRCSLNWFLNVSEQRFEERLKGDFIETESLG 480

Query: 481 PSFCMGGRLELPSNETIVSDDE-DECDEQ-LHRRIVSL 516
           PSFCMGGRLE+P NETIVSDDE DECDEQ LHRRIVSL
Sbjct: 481 PSFCMGGRLEVPGNETIVSDDEEDECDEQFLHRRIVSL 518

The following BLAST results are available for this feature:

BLAST of Cucsat.G13316 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	2.5e-124	50.24	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	1.0e-117	48.24	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q6AUK6	6.6e-117	52.49	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
F4IHL3	2.9e-35	25.62	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	5.8e-28	23.29	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of Cucsat.G13316 vs. NCBI nr


Match Name	Identity	Description
XP_004141131.1	99.81	transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KGN597...	[more]
XP_008464974.1	94.80	PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo]...	[more]
XP_038905918.1	93.57	transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_0...	[more]
XP_022980596.1	90.54	transcription termination factor MTERF4, chloroplastic-like [Cucurbita maxima]	[more]
XP_022930565.1	89.96	transcription termination factor MTERF4, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cucsat.G13316 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LI61	99.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842630 PE=3 SV=1	[more]
A0A5D3D5I6	94.80	Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CN78	94.80	transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A6J1IU10	90.54	transcription termination factor MTERF4, chloroplastic-like OS=Cucurbita maxima ...	[more]
A0A6J1EX70	89.96	transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 208..239 e-value: 0.0034 score: 26.6 coord: 244..275 e-value: 0.0049 score: 26.1 coord: 388..419 e-value: 0.0068 score: 25.6 coord: 136..167 e-value: 8.1E-4 score: 28.7 coord: 353..383 e-value: 210.0 score: 9.2 coord: 420..451 e-value: 2.3E-5 score: 33.8 coord: 280..311 e-value: 0.0011 score: 28.3 coord: 316..348 e-value: 270.0 score: 8.3 coord: 172..203 e-value: 0.58 score: 19.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 158..466 e-value: 2.3E-103 score: 345.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 58..499
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 262..475 e-value: 1.0E-46 score: 161.3 coord: 125..261 e-value: 5.4E-25 score: 90.0
None	No IPR available	PANTHER	PTHR13068:SF24	EXPRESSED PROTEIN	coord: 58..499

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13316.T1	Cucsat.G13316.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding