Cucsat.G13213 (gene) Cucumber (B10) v3

Overview
NameCucsat.G13213
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg1838: 2444388 .. 2452354 (+)
RNA-Seq ExpressionCucsat.G13213
SyntenyCucsat.G13213
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGGTCCAAGAAATCACATCTCTCTCTGGCATCCGATTAAAAAGCTCCTGGGCTTCATCTACCCTCCTACGTTGCATGAACGCTGTAATAACAGTATTCCAAGACACCACATTCCTCTCAGGCATTTTTTCAAACAAATCCAAAGCCTGATCTATCCAACCTTTTCGTGCATACCCTTCAATCATAGTGTTCCACGAAATGACATTCTTAACAGGCATGGCATCAAACAATCTTCTAGCCTCCTCAATCCTGTTCCATCTTACATACCCACTAACCAATGCTGTCCAAGTAACAACATTCTTTATAGCATCATTTCTATCAAATAACGTCTTGGCTTCCTCAATCATTCCACATTTAATATACCCAGTAATCACAGCAGTCCATGAGACCACATCTCGATCAGGCATTTCTTCAAACACCTGACGTGCTTCTCCAATTTTTCCTTCTTTACCAAGCTGTGTGATCAACCAGTTACTACGAGCAACATTCGAATTGGCACTGAAATCTCTAACTGGTGATGAGATTTTGGGAACAACCTGACAGGTAGAGAACTGTGATGATAAGATGGAGTTATGCAAATTGCACAAGAGGAACGCATATCTACCGAAGCTAGAAAGAAGAGTTGTGGTTTTATGTTTACCACAAATTTCTCCAACAGATATCTGATACAGTAAAGACATTCGTATCCACTAACTGGGTACCTCCGCCGCGCCGGAGAAAAAGATCGAAGAAAAAGGGAGCGGCTGTTTTTGTCGTGATTATGTGGAAGGGACAATTTTTTTTCCATTAATTTTGGTAATATTACATCTTTCTCAAAAATATCAATTTTGACCTCAACGCCAATGGTTGATTTTTCTTATATCTTATGAGTGTTAAAATTTGCTATTTAAAAAAAAAAATCAAAATCATTTTACTGCTTACTTTCCCATGTGAGTCTAATTTAATATTGGCATTTCTAAGTAACATTTTTCCATTTGTTTTTCTTTTCTTTTTTTTAATTTAATACATCTTTTAACAAATTTATTATCATCCAAATTTATTATTATGTCATCAACAATAGGCCACATAAACTATTATATATGTTGTGACTGTTTTGATTTTGTGTTGATCGATTTTAGAAAATGTCAAATAGTCACAAATTAAAAGTTAATAGACACTCTAGTTTGGGTTAAAAAATAAATAAAAATATTGTTAAAAACGGTTCCTTCCTTGAAAAACAACCAACAAAAGAATCAATATGATATAAAATAGGAATTAAAAAACAAAGATCAAGTAAAAAGTAAAATTTCATTATCACAAATAATGAGCATTGTTTAACTTACATCGTGTTTACAAAGTTATGCCATCAATCACAAAATCCAATGTTCGATTCACCCACCCCACATACTATCAGACAAAAGAATTCATAAATCTCTACTATCTTAAGCAAGTATACAAATATAAACTTGCAAGGCAGGGAAGTTATAGCTCATTAGCTCTATCGTTGCTCCATATCTAGTCTATTAGAAAAAAGTTGTTCACTAAAAGATACTGAGTGTCTCATCATACAATTGAACAAGTCTTCAATCTATATTACCTTGAATTCAAAGTACTTTCAAAGTTTCTCTCACACATCAACAACTTTAAATTGTTGGTCACATTGCGACAGCCTCACAATCTAATTTCGTTAGTAGGGGCGCTTGACATCCATTCACTAGCTAGATTAAGGTGAATAGTCTTCATAGTTACAGGCAAGTCTTCAACCTCAAGTTATCTAAGCCCCCAAGCCAAGCCACCATCTCTGAGAAGTTTCATAGTTATAAAAGCCCAATCTAGAGAATAAAAATAAGAAAATGGCATTGAAATTATATAACAAGATATAAAAGGGAAAAATTACAATACAAAGCACTTCTAGAGGGGCCTCTAAAAAAAACTACACTTCATACGCTATTTTTAGCAATAAACTAATATGTTCGTCCCATGGTCAGTCCCAGGTAGTAATGGAAGCACCGCTGCTCCATAAGACAGATGGAATATGAGACCACCCAAAATGGAGGAGATCCTTAAAAAGGAAAACCATCAACATTGTTAGGCATTTTTATATGAAGTTTACGCGGCTCTAACTCGCTCTATTTACAATCACCTTTCACTAACCAATTCCTAATGATGACAAACATGCGCTTCTGATATCTTGAATATTTCTCAAACAACTTCCCAACTAGTAGTCTTAACAGATCTATACAAGCAGATAAGAGTCAGCCATCCTTTTCTAGTTTTACAATGGAAATTAATCGTCTAATCTCCAATTGGACTTTCAGAAAACTAAAAAGTATATTGACTGGCTCCTACTTAGAGAGACCCTATTGAAGAATAGATCCCAAACAAACGTTCTTTCCAGCTAATTTTCAATTATCATAAGACAGTATGAAAGATTAGTATATCAGATACAGTTAAGATGTCAATCAATATTCAACCCATAGTTGTAAAATCTTGACAAGGAGGATAATATTCAATTGAAATGAACCAATAAAATAAAGGAGATAACTGATAATGGATTGCATAGTGAAAGAGTAGAATAGTACGAAAATGTATAACGCCCTAAAGTGCTTCAGAATAACTGGGGGATGCTCCCATCTCATAGAAGAAAAAAGAAAACAAAATTAGCACATGGAGTTCAATGACCATTAAGTTGATATAGCAGGCATCTGGACCAAATTAAGTTCATGTTTGAAAGTGATTTTGAAGTGGCTAAAACCATTTTTGTAGTGTTCAAAATCACTCCAAAACATTCATTTCATTACTCAAAATCAATTCAATATTTAACTTTACACGTTTAGAGACAATTTTCATAGTATTCAAATTGATTTTGAAGAAATAAAAGCATTTTTCGAGTGATTTTCACTTCTCAACATGACACAGATCCATATTTTCACCATTCCAACAACCCTTCTATTTGATGGAAATGACATATTTTGGATGCCCAATGATCAAATGCTAAGCATTCGTTTGTACAAGAAGCATAAAATTGCTGCCACAAAAACTTGGCATATTAGCTCTTCAAACTTGAGAATGTCAGTTGAATCAATGAAGAGGAAACCGAGTAATAGTTCGCATTTTAGGTAGCTATAAACATGAATAACCACTCAAATTGCAACCTCTTCAATTTCTTGAAAAAGCAAAAGACTCGGCAGATCAATTGTTGCAAAATGGCATTCCAAACCACAGTTCAAATGATTGAGAGAGAAAAGATGACCCGACCGACTCTTGAAACCCTATCAATATCACAAGAACTGGAAAGAGCATAATTTGCAGAAATCCATGATTGGAAAATCTCAAGGTTGCTCTTCCGTGGACATGAATTAGGTAAAAAAACACAATTACTAGACAAAAACAAACATTCAAACTTCAGAAATGAAAACAAAACGGAAAAATTCAAGGCCACAATACAAACCAGAGAGTTAAGAATTGATGAAAATCGAAGAAAACCCGGTCAGCCAATGTGAAAAGCGCCAATATCGCCAGTTCTGATGGAGCTGGCGACTTCGTCGGCAAAGGCCAAACAAGAAGAAATACAGCCGCTAAAGGCACCCCAAACCATATCGGCGATCCAGAACGCCAAATGCAATGGCAATGCCATGGCCTAAACTGTGTGTCGTTGGAGGAAAGAAGGTGGTTGGGAAGTTTCAGAGGAAATCCATTGAAGGAATTGAGAGATTAGGATTAGAGGACGCCATTGGAGAAAAGAAGCAGAAGAGAATTTGGGTAAAGGTAAAAAGGCTGGAAGCTAAAGATTGAAGAAATGTTGACTCATAGCGCCTAAATAAAGCCGATTTTACAACAATTTCTTTTTCCGGAAAATTAGTTTTTTAGTCCTTTTAATGTATAAATAAATAAATAAGCCTATATTAAAGGAGGGCAAAAAAGTCCAACTTTATAATTAACAACTTCCATCCCACTATAATCATAATCCAAAAATGAACATGGAGCTGTTTAAGGCATTGAGTAGGGAGATTGCTCAAACATGCACAACAGTGGAACGAGATGGCTTCCTATTCTCGACATAAATGTTTTGACTTAACCCCTTCTTAAATCTTTGTAAGATCAGTTGATATATCATTTACGCGATCATCTAACTATCCATAATAAGTGAAGTTTTGGAGGGGCTAGTCACTCGAGTAAACTTGAGTTTGCTTTGATTTTGAATTGAGCAAGTGTAGATTTCAATACTGAATGCTGACAATGAATCATCTATTCAAGACCTCTTTTTTTAAGGATGAGATTTTAGGTATATTCCCGTAGTTGTTGGGTTATTTAATCACAAGCGCAACTATATGAAACAAAGTCTATTTGGTCTTTAGGTTTCAAAATGTTTGATTTCAATTTAATTTCTAAATTTCAACGTGGTAAACTGAGAGTAAGTTCCTAAAATGACTTGTAAAACCTATATTATGAACATCAAATAATTCAATTGTACTATGTCACCGATGCAATTGAAATATAAACTAGAAATCAAGCTCACTTTCTATTTTGATATGTTTTCAAATATATTAGTCTAGGTAATTGATTTGTATGAAAGTCAATCCAACATTGAAACCTAAATAAATTAAGCCTTGGTAACTCTTTCAATTTTTTAAAAATATGACCCATGTCTAAGGTCAACTATTGTATGTTTGTCTAACCATATTTCAGTATTAAAGTATAGAACATGTAAACCATCTATTTGGATACATATTAATTATTCACACACTTACATTAAAAAAAATGCAAGATGGATTTTCAAAGATTTCGACTTTCCATAAAAAATCTTACATGCAATAAATAAAGGGATAATTATAGTAGGTAACAATTTTAAAAATAAATAATTAAATATATAACAATATTTTTAAAAAACTGTAAATATAACAAAGTTTATAGACTAATATTTTCAATGAGATATATTAGTGCATAGTCATTTATCAAGTCGATGGACTTCTATGAGTTTGACACTTGGTGACAACCACAATAATACAATTCTTAGGCAACTCACAAACTAAGGCGAGAGAGCAAGAGCAAGAGGGAAACGAGGAAAGGAAAAGCAATCAATAAATAAGTTTAGTAAAAACAGTTAAATTTTATTCTTCCAGAAAATTTGAAGTCATCCCTGCCAAAAAACACATAAACAAAGTTCATGAACTGTTTTACATTTTACATTTTTGACACAAATGGGGCAGTCAAAGACAAGGAAATGAATAGAACGGAAGAAAGCTAAAGAAACATGAAAGGAGTGAAAGTGCTCATTGCTCAAGAAGTGATCAAGATCCACACTCAACTCAACTCTCACTTGTCATTGTTTGTTTCCAATAGGAATTTACATGATTTCTTTTCCTGTAATACATGTTTGTTCCCTCCGCATGAGAGACGTATGAATGAATACTTCAGCAATATAAAAAACATTGAAACATGTTCTAAAAATCAAAAGCAAAAATCATATGAATGAAGAACGATAGTGTTTATTTCAATCATCAAAGCACAAAAGTATATGCTGTAAACTATACTTCGATTGCTTCTTCGGTATATGGATTTGTTTCGTTGAAATAACTTGAAATCAAAAGTTAAAAAGCACAAAAGGAAGAAAAATTGGATAGATTGTTCTAGTTTCCAAAGCACAACCATTAGCTTCTTCAAATCGATATTTTGATTGCTACCCGCCACGCCTTTTTCTAAATAACATAATTATAGATTAAAGAAGACTGACCTGTAAAAGAGGGAAGAAATCTATCTTAGTTGTTTGATGGTGGAAGTAATCTCATCCATACAAGTTGCTTGCTTCCCTATTTACCATTTGCCTGTGAATATGGCTGACAATGAGAGATGGAGTGGATATTAATAACAGGAAATTTGCTGTTATAAGGAAGCGACAATGTTATAAACATACCAAATGATAAATCAAATGTGATTTTAACAAATTTCTATGACTCTAAAGATTAATTTTGAACCGTCTGCTTGCAAGTGTTATATGATCTTATATAAACAAAGAATAAAACATACAGCAGACCCAATGAAGAGAGCTTGGACTACCAAAACGAAAATTTCCATCTCAAAAGAAAATTTTACGTTTTTTTACACACTTCTCCACTTTTTTCTCTTGATTTCCTGGTTTAAATATAAGGATGTAAGAAGTAAGAAACCATTACACAAAATCTCTAGAACAAAGAAAATTACAAATTCAAGGAACTTGTCACTCGAAAATGTATTTAACTAACCACTGAGTAACCAAAAATAAACAAGTAAACGTAGAATAAATTATAAATAACCTACTTTTCTAAATCATATCTTAAATATATTTAAGACAATAAAGTACAATTTTAACAAAAAAAATTATCTTTTACTTTTGTAATAACTATAAAAGAATACCTGACCTCAAAATTAGCAGGCCAAGGAGAGATTCGATCAACTTCAGAATAAAAGAAAATCACCATGGTCTCACTATGGCTCTAAACCCTAGGTTCAGACCTCAAAATTCACAAGTCAAATTATGATATTCATCAGAAAACGCAACTAGGAAGCATATTGAGTGAAAATGCTATTATTGAAACAATCAAGTAAGCGTAGTCTATGAATTATGTGTGTTGGATAATTCTTGTATCATGGAGATAGGAATTGAACCATCCATTTCTACTAGTTCTCACTGCGAAGCTGAGAAAGGACAAAAAAATGGCTGGTTTATCTTTCTTGCTTTGATTTAATTTTCGTAACAGGTGCATCCAGGTTTTGAAAGCCAACTGGAAGGCCAAGAATATGGACATTACACTGTTACTGTGATGTTAATATTCTGTAAAAATCTTGTGAAACACATAACCGAATGAGCGCCCTGATCCAACAGAGTTCTGTACCCTACCTGTGGTGTCAATGTCAACACATCTCATCGACACATGGAAACTGTTACATGATCATCCAAGTAAGAAGGAATTAGGTAGCCGACCATAAAGCAAATAAATATTCTCTTATATTCTTCCACAATTTAATTGCAACGCATTTAGCATCATTGAAGAAGATAAGGCTGGCCATGCAAATTTCCCGACAGTTCCAGGCTCATGCCATCATAAATTGAAATCCATTGTTAAATCCTCATGCAATGTATGACCAATCTTCTTCATTTTCGTATGTAGATCGTGAAGTAAAAGGTAAATATTTTCAAATTCGCAATGAGAATTGTCATCCACTACGAATGCATGCACTGTATTTCCAACGTCTATCCAACTGCAACCAGGCTGCTTCTTCAATCCTTTGTCCTTGGTTTTCTTTCTTACTCTGGCAGCTTCTCTCCATTTTCCAGTTGAAGCATATGTGTTAGATAGCAGCAAAAAGGTTCCTGCATTCTCTGGCTCTGTTTCTAAGAGTTCTTCAGCCGTTTTTATGCCCATGAACATATCTGGCAAGAAGAGCTGCCCAAACAGGTGCCGAAGGCTTGACCTCAAGCCCCTTGAGGAAATCAAATTGCATCAACGCTGAGCTTCATCCGATTAAAAAGCTGAGCTTCATTCTCTGGCATCCGATTAAAAAGCTCCTGAGCTTCGTCTACTCTCCTATGTTGCATCAACGCTGTAATAATAATATTCCAAGACACCACATTCCTCTCAGGCATTTTTTCAAACAATCATAGTGTTCCACGACACGACATTCTTAACAGGCATGGCATCAAACAATCTGCTAACCTCCTCAATCCTGTTCAATCTTACATACCCACTAACCCATGCTGTCCAAGTAACAACATTCTTTATAGCATCATTTCTATCAAATAACGTCTTGGCTTCCTCAATCATTCCACTTTCAATATACCCAGAAATCACAGCAGTTCATGAGACCACATCTCGATCAGGCATTTCCTCAAAAACCTTACGTGCTTCTCCAATTTTTCCTTCTTTACCAAGCTTTTTAATCAACCAGTTACTACGAGCAAGATTTGAAATGGTACTGAAATCTCTAACTGGTGATGGGATTTTGGAA

Coding sequence (CDS)

ATGACATTCTTAACAGGCATGGCATCAAACAATCTTCTAGCCTCCTCAATCCTGTTCCATCTTACATACCCACTAACCAATGCTGTCCAAGTAACAACATTCTTTATAGCATCATTTCTATCAAATAACGTCTTGGCTTCCTCAATCATTCCACATTTAATATACCCAGTAATCACAGCAGTCCATGAGACCACATCTCGATCAGGCATTTCCTCAAAAACCTTACGTGCTTCTCCAATTTTTCCTTCTTTACCAAGCTTTTTAATCAACCAGTTACTACGAGCAAGATTTGAAATGGTACTGAAATCTCTAACTGGTGATGGGATTTTGGAA

Protein sequence

MTFLTGMASNNLLASSILFHLTYPLTNAVQVTTFFIASFLSNNVLASSIIPHLIYPVITAVHETTSRSGISSKTLRASPIFPSLPSFLINQLLRARFEMVLKSLTGDGILE
Homology
[Close]
BLAST of Cucsat.G13213 vs. ExPASy TrEMBL
Match: A0A7C9EII7 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.72e-05
Identity = 35/70 (50.00%), Postives = 39/70 (55.71%), Query Frame = 0 

Query: 9  SNNLLASSILFHLTYPLTNAVQVTTFFIASFLSNNVLASSIIPHLIYPVITAVHETTSRS 68
          S  LLASSI      P +  V  TTFF +   SNN  AS + P   YP+  AVHETT  S
Sbjct: 2  SKTLLASSISPACISPPSITVHETTFF-SGIRSNNNFASEVNPSCTYPLTIAVHETTFLS 61

Query: 69 GISSKTLRAS 78
          GI S T RAS
Sbjct: 62 GIESNTSRAS 70

The following BLAST results are available for this feature:
BLAST of Cucsat.G13213 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G13213 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G13213 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7C9EII77.72e-0550.00Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G13213.T3Cucsat.G13213.T3mRNA