Cucsat.G13155 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13155
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Growth-regulating factor
Location	ctg1838: 1204235 .. 1206506 (+)
RNA-Seq Expression	Cucsat.G13155
Synteny	Cucsat.G13155

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGAAACGATAAAACTACCCACTTGCATCCTTTTGCATTCCATCACCCTCTCCTCTCCCTCCGTACTCTCCACTCTGCTCCTCCGATTCCCCCTTCCCCCTTTACCTGCTACCTTCTCTTCCGGTTTCCCACCCCCCCGGTGCAACTCACAATTAAAACCATACACACACTCCCTCACAAAAATCCCATTCCCCAAATTCTCCCCCAAGATAAGACCATCCCCCTCTAGTTACTTCTTCCTTTCCGATCACTTCCCCCGATATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGTTAGTATATTCATTTCCATCTACCTCCGATTTCTCTCTTCTCTTTTTCTTTTTCTTCAATTGCACCCCACGATTTCTTTACACTACTAACACACCGCCCACCCTCTTCTCAATTTTTTTTACATCTATCACTCATCATTCATTCATGGGGGTTATTCTCCCATTTTTCTCTACTGTAGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGTACCCATTAACTCAAATCTCCCCCCCCCTCCCTATTTCTTTCTTCCTCCAACAATTAGTAAAAAAGTTTTCTTTTTTCTTTTTTCTTTTTTATTGGTATCCAATCAGAATAGAGGGGAAAAGAAAGGGGGGCAAGTGGAAATACTGTTGGGATATTTTTTTTTATATACATATATTTCATTAGTCTATTGTGCGCTCATGGGCTCTGCATGTTCTTCTTCACTATAAATGGTCCACACCCTCCCCTTTCCTCTGATCACTTACCAGTAATTAATTGTACACTTTACATATTCTTTTTGTTTTCCTTACGATTAATTGTTTTTTTTTTTTTTTTTTTTTGCATTACATGAGTACCTCAGCTATGGGTTGTGATCACTTTTTCTTTTCTCTTTGGTTTTTAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGGTTAATACCTTTCTTGTCCCTTTTAATTTAACTTACTCTTTCGCTATTTGGCTACCTACTGCACTGCACCCATTTTTCATTTTTCATTTATATTATATTCTCATTTATTCAATTATACTTTTTCTGTTGTGAGATTTTGTATGTTTAATTCATATGGAAGGTCTTGTTTTGGGCTCTTTTTCTTTTTGAACTTTGTGATTGATGGTGGGAATTATATTCTTGTTTAATTTGTTTATATATATATGTGTGTGTGTTCTTGTATTAGTTGTGCTTATGTTTGATGTAGTAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTGTTACATAGATAACAGCTTCCTGATCTTTCCCTAAATTTTCAGTTTCTGTTCTTTCGATGGTATTTGGAAAAGTTTCTATTTAGATTGTTTTTTTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAATTGTATTGTTTTATGTATTTGGACAATTGAACATATATATTATATATATTAATGTGTATACTACGTTTGTTTATATAGCAAATACTATGTGTGTGGATGAAGAAAATCAATTAAATTAAG

Coding sequence (CDS)

ATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGTAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAA

Protein sequence

MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK

Homology

[Close]

BLAST of Cucsat.G13155 vs. NCBI nr
Match: XP_004136730.1 (uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus] >KGN59436.2 hypothetical protein Csa_001252 [Cucumis sativus])

HSP 1 Score: 561 bits (1447), Expect = 1.75e-201
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120
           NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ
Sbjct: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120

Query: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240

Query: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290

[Close]

BLAST of Cucsat.G13155 vs. NCBI nr
Match: XP_011652086.1 (uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus])

HSP 1 Score: 555 bits (1430), Expect = 6.58e-199
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120
           NNALLPHSSSSSSQ GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ
Sbjct: 61  NNALLPHSSSSSSQ-GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120

Query: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240

Query: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 289

[Close]

BLAST of Cucsat.G13155 vs. NCBI nr
Match: XP_008443038.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo])

HSP 1 Score: 488 bits (1256), Expect = 2.01e-172
Identity = 267/295 (90.51%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQV 120
           GAETINNALLPHSSSSS QVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+KD   QV
Sbjct: 61  GAETINNALLPHSSSSS-QVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDI--QV 120

Query: 121 ATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
           ATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPS 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP    S FPS
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP----SQFPS 240

Query: 241 SPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 287

[Close]

BLAST of Cucsat.G13155 vs. NCBI nr
Match: XP_008443039.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo])

HSP 1 Score: 484 bits (1245), Expect = 9.17e-171
Identity = 265/295 (89.83%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQV 120
           GAETINNALLPHSSSSS   GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+KD   QV
Sbjct: 61  GAETINNALLPHSSSSSQ--GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDI--QV 120

Query: 121 ATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
           ATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPS 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP    S FPS
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP----SQFPS 240

Query: 241 SPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 286

[Close]

BLAST of Cucsat.G13155 vs. NCBI nr
Match: XP_008443037.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo] >KAA0043742.1 WRC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 483 bits (1244), Expect = 1.74e-170
Identity = 266/301 (88.37%), Postives = 273/301 (90.70%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQV------GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120
           GAETINNALLPHSSSSS  V      GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP   
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP--- 240

Query: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 290
            S FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 -SQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 294

[Close]

BLAST of Cucsat.G13155 vs. ExPASy TrEMBL
Match: A0A0A0LGX5 (Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_3G806230 PE=3 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 3.19e-199
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120
           NNALLPHSSSSSSQ GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ
Sbjct: 61  NNALLPHSSSSSSQ-GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120

Query: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240

Query: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 289

[Close]

BLAST of Cucsat.G13155 vs. ExPASy TrEMBL
Match: A0A1S3B760 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 488 bits (1256), Expect = 9.71e-173
Identity = 267/295 (90.51%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQV 120
           GAETINNALLPHSSSSS QVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+KD   QV
Sbjct: 61  GAETINNALLPHSSSSS-QVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDI--QV 120

Query: 121 ATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
           ATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPS 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP    S FPS
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP----SQFPS 240

Query: 241 SPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 287

[Close]

BLAST of Cucsat.G13155 vs. ExPASy TrEMBL
Match: A0A1S3B7U9 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 4.44e-171
Identity = 265/295 (89.83%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQV 120
           GAETINNALLPHSSSSS   GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+KD   QV
Sbjct: 61  GAETINNALLPHSSSSSQ--GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDI--QV 120

Query: 121 ATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
           ATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPS 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP    S FPS
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP----SQFPS 240

Query: 241 SPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 286

[Close]

BLAST of Cucsat.G13155 vs. ExPASy TrEMBL
Match: A0A5A7TKD1 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00710 PE=3 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 8.43e-171
Identity = 266/301 (88.37%), Postives = 273/301 (90.70%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQV------GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120
           GAETINNALLPHSSSSS  V      GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP   
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP--- 240

Query: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 290
            S FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 -SQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 294

[Close]

BLAST of Cucsat.G13155 vs. ExPASy TrEMBL
Match: A0A1S3B737 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 8.43e-171
Identity = 266/301 (88.37%), Postives = 273/301 (90.70%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQV------GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120
           GAETINNALLPHSSSSS  V      GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPSP   
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSP--- 240

Query: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 290
            S FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 -SQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 294

The following BLAST results are available for this feature:

BLAST of Cucsat.G13155 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13155 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136730.1	1.75e-201	100.00	uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus] >KGN59436.2 hy...	[more]
XP_011652086.1	6.58e-199	99.66	uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus]	[more]
XP_008443038.1	2.01e-172	90.51	PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo]	[more]
XP_008443039.1	9.17e-171	89.83	PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo]	[more]
XP_008443037.1	1.74e-170	88.37	PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo] >KAA00...	[more]

BLAST of Cucsat.G13155 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGX5	3.19e-199	99.66	Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_3G806230 PE=3 SV=1	[more]
A0A1S3B760	9.71e-173	90.51	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]
A0A1S3B7U9	4.44e-171	89.83	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]
A0A5A7TKD1	8.43e-171	88.37	Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3B737	8.43e-171	88.37	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 89..129 e-value: 3.1E-15 score: 55.6
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 87..131 score: 21.18947
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..178
None	No IPR available	PANTHER	PTHR31602:SF19	OS02G0773600 PROTEIN	coord: 6..204
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 6..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13155.T3	Cucsat.G13155.T3	mRNA
Cucsat.G13155.T1	Cucsat.G13155.T1	mRNA
Cucsat.G13155.T2	Cucsat.G13155.T2	mRNA
Cucsat.G13155.T8	Cucsat.G13155.T8	mRNA
Cucsat.G13155.T4	Cucsat.G13155.T4	mRNA
Cucsat.G13155.T6	Cucsat.G13155.T6	mRNA
Cucsat.G13155.T7	Cucsat.G13155.T7	mRNA
Cucsat.G13155.T10	Cucsat.G13155.T10	mRNA
Cucsat.G13155.T11	Cucsat.G13155.T11	mRNA
Cucsat.G13155.T5	Cucsat.G13155.T5	mRNA
Cucsat.G13155.T9	Cucsat.G13155.T9	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding