Cucsat.G1310 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1310
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	30S ribosomal protein S1
Location	ctg1: 11337562 .. 11342174 (+)
RNA-Seq Expression	Cucsat.G1310
Synteny	Cucsat.G1310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATAACGTGAAAGATATTGTGGATGGAAATATTGGGGGAGATAAAAAGGTTAATGCTATATTGAATTCGATGATAGTAAAATACAATAACAGAAAGAGTGGGTAAGATTATATATTTGCGAAAAGCTATCTTCACTACCTTATCCAACCCAAACACCACATCAACTGTCGGAAGAAGGGAGATGGCTTCCATGGCTCAGCAATTTACTGGGTTGCGATGTGCTCCTCTTTCTTCATCGCGTCTCTCCAAGCCATTTTCTTCTAAGCATTTTCTGAACAAATCCCGTTCGCTTCCTGTTCAAGCTGCAGTCATTTCGGGCCCTATTCCCAGTCCTCAGACCAGGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAGGAGGCTTATGAACGTTGCCGTAATGCCCCTGTAGAAGGCATATCTTTCACTCTTGAGGACTTCCATGCCGCTCTTGAAAAATACGACTTCGATTCTGAATTGGGAACTAAGGTTATTTCTGGGTTGTCGTTTTTTTTTTCCTTTTCAATTGTGTATTTTTGTGGGGGCGTTTAGTTGATTATACTGGATGGGATGTCGTGAAGTTTAAAGGGTTGTTGGTTTGATGTTTGGGAATTGGGATTTTTTTATTTATTTTTTAATAGTGGTGGGTTTTAGTTTGTTTATGTAGTTCGATGATTTTTCTTGTTAATTACATTGGATTCTGGATTCTGTAACGTTGAATGTTTTGCTAATTTGATGTTATGGGAATTGGGAAGTAACAGCAATGAGATGCTTGAGGTGCATTTGAAGGAGATTGGGTTGTAATTTATGCAGTGTCTCTTTTCAGGTGAAAGGTACTGTGTTTTGTACGGATAATAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATATTTGCCATTGCAAGAGGCTTGCATTCACAGAATCAAGCATGTAGAAGAAGCAGGAGTATTTCCTGGCTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAATCTGATGATAGCTTGATTTTGAGCTTGAGATCCATTCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGACGTTGTTGTCAAGGGTAAGGTGGGTATTTCTACTCCAATTTTTGGTGCTTTTGTTTGTATACGTCGTCTGAAACGTGGGTGTGAGATCGCTGTCTAGTTGGGTAATAGGAAACTAAGATGTGTTATAGCATTTGCAGCATCATTTACCGAGAGGGGGATGGTTGTTCTATGCCATTTATCACTTGTTGTGCTTTTTTATACTCGTGTTTTTTTCCATAGGTCATTCATTTTAAATAACCACGAGACTCAAAGGCTTAAGGTTATGATTTCTTGTGAATGTTGTTCTATGCTTGTTATCGTTTGTTGTGCTTTTGTCGTACTCATGTTTTTTTTTCCATAGGTCATTCATTTTAAATAACCACTAGACCCAAAGGCTTAAGGTTATGATTTATTATAAATTTAATTTGTGGAGTTGGACATTTGCGCAAGGCTCAATAAGTGATTACGAATTAAGACTAGAAAATGGCATTTCGCAATGCCATACTAAATCACCCTTAAATATTAAAAGAAAGAAAGGTGCTAGGTTACTGTAAATTTTATATTGTATTAGTACTTAACAATTCATATGTGGCCATTTCTTCTGTGTTCAATGTTCAGGTGGTCGATGCTAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTTGTCCCTTTCTCACAGATATCAACGGTAATTTCTCGTAGCTATTGAGGACACTCACATTTTGAGAGTTCTTCTGGTTTTATTTATATATAATATATAACAGACTATAGTTACTGCTGGAGTAAAGCTTATTAGTTTCTCACAATTGTTAATCAATGAATGGTTGGTTGTACGTGGTGTTATTTGCAAAGGTCATGCTGATTTTCCACTTCCTTCCCCCACAATTATCAATTGGATACATTGGTACTATTTTAGTTTTGTTGATGTTAGTTATATACTGCTGATTAACGCCATGCCTGTTTTGTCTTTTTATCCCTGCAATGTTTCAGAAATCAAATGCTGAAGAGCTTCTCAGCAAGGAGCTTCCTCTAAAGTTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAACTTGGAATTGGATCAGTGGTCACCGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGATATTGGTGGAATCAATGGTCTTCTTCATGTTAGTCAAATCAGTCATGACCGGATATCGGATATTGCAACAGTCCTTCAGCCTGGGGACTCTCTCAAGGTAATTTAATGCCTTTCAAGTGATTTTAAGGTGCTTCTTACTCTCATGATTTCAAGTTTTACAATGAGCTCTTTTGGCATAGGTCATGATATTGAGCCACGATCGTGAGAGAGGCCGAGTTAGTCTCTCTACCAAGAAGTTAGAGCCCACTCCTGGGGACATGATTCGCAATCCAAAGCTTGTTTTTGAGAAGGTATCCTCTTTGCTGACTAGAGTTATCTATTTCTGTTATTTTTGTACCGATGCTGCTTTTTCTTGTTATACGTGGATTTACTTGCACAGGCTAACGTGCTTTGGTCTTTCAGCTACAATGCTACAATCTCATTTCATTAGTTAAAGTGCAAATTTTAATATGGCCAAGGTTTTGTGCTTTCTAGGGTAGCAGAAACTGCTGACTAATTGCTATTTCACCTTCACCTTAGCATGTCTTTTTTTTTTTTTCAGATTTTTAAAACTACGATTGCTAGACTTTTGGTGGTTATCCCTTGAATGTTTTTTTTCTTTATATTTGTAAGTGTTCCGACCAGTTTACACGCCCCTCAACTAATCTCATAGGACAACCCATCTGACCTAAAATCTAGAGTCATGTGGAGGGAGTAATGCTTAAAACCTCTGCTTTGCTGGTAAATTTGGATATGGATAGTAGTAAATATTTTGAAAATAGAAAGTAATCTTAGAGTTTCTGATCCTTTGTTTTGGGAAGTCTATTGTTAGAGCGCACTTGATAGTTGATAGGAATATTTGCAATCATTACTTGAAGGCCTATATGTAAACTTATGTACTTTCAGTTGGGGTTATATTTCTTTTTTCTAGATTCTTGTTTTCGATTACAGAGTTCATTTCCTATCAAATAGTGAAAAAAGGAGGAAGAAGCAAAATAGCAAGAGATATAATTGTAACTTTGATCTTTTTTCCATCTGCAGGCTGAGGAGATGGCACAAACGTTCAGGCAAAGAATAGCCCAGGCAGAGGCATTGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGGTACTGTACAGCCATCTATCCTTGAGATTTCTAAACTGTACCTTGAGAATAAAGAAAAAGTTAATGATAAATGCAATTAAATGGTACGTGTCGGAGTTCTAAACCATAAAGTGGAAAGTACATCGAGTCATTCACTTTGTGGTAGTATAATTGAGTACATGGTTTTACAGTTAGTACTGGCTTCGTGACTGAGGATGTATTCTTTATATTGGCTCACCATCCTGCTTTAGCTTAAACTCTCTCTATTAACCAACTTGATAAACAATCTACATCAATGCTCAGTAGGGTATTGTGTTGAATGTTCATATATTTTTTGTGTTGATATCCAATGGTTTATGAGAATTCTCGTAGGATAGTGTTGGACATTCCTATGGTTTAAAAGTGTATTGGGTATAAATTTTGGACTAAACGTATGTCTTTTTTATTAGAAATTAGAAATGTTTCTAACTAATTAAGAATACCTTTCCCTGTGGAGTACCATCAAAAGCATTTTAAAGTGCGTTTAAAAGAAACAGTTGTTTTTAACGATGGTTGAAAATGCTTATAGAAGTAGTCACTCACATGAAAGTCTCTCTAGTGTCATTGAAACACATTCCAAGTCCTCACTAACGATATCATATGAATAAGTTTTTCCAATCATCTGTTGTCGTCTTGTGTTTCTCTCTACATCATAATATCTATATATGTTGGATTTGAAATTAAATGGTTACTTGTTTTAACCATACAGAGTGGTTTGACTTTGACTACTGATGGAATATTGGGACCAATTACTCCAGAGTTACCTGTAGAGGGTTTAGATTTGAATGATGTACCTCCAGCTGAAGAGTGAAGATTCTTTCCCACCGTTGTATTCTGTACAATGTTTCACTTTGTATACAAACTTCTGCCATTGTAATTGGGTACGCAACTTCGTCCTTTCTGTCATAGCTTAGTGTTGAATGGTTGATGAAAGCCCATTTGCTAGTTTATTTTCGTTCTCTATTCTTTTCTTTCATTTTTATTTTAAGGAAACACAACTTTTCATTGATAAAATTAAGAGAGACTATCCTTCAAAATACAAGGACACAAAAAGAAGAGACACAAACTTTAAACGATATAGTCCCAAGAATACCATGAACTAAACCGACAAGGTGGCCCCTCTCAATTGTAGATTCATTTGTTAGTCTGTTCACAAACGACTTTGAAATTTTTTGCCTCTTTTCCTGTCATGGACCATATTTGATTTTCAAAACAACACTTTTCTTCTTCAATATTAAGGCTGC

Coding sequence (CDS)

ATGGCTTCCATGGCTCAGCAATTTACTGGGTTGCGATGTGCTCCTCTTTCTTCATCGCGTCTCTCCAAGCCATTTTCTTCTAAGCATTTTCTGAACAAATCCCGTTCGCTTCCTGTTCAAGCTGCAGTCATTTCGGGCCCTATTCCCAGTCCTCAGACCAGGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAGGAGGCTTATGAACGTTGCCGTAATGCCCCTGTAGAAGGCATATCTTTCACTCTTGAGGACTTCCATGCCGCTCTTGAAAAATACGACTTCGATTCTGAATTGGGAACTAAGGTGAAAGGTACTGTGTTTTGTACGGATAATAATGGAGCACTTGTTGACATTACTGCCAAGTCATCTGCATATTTGCCATTGCAAGAGGCTTGCATTCACAGAATCAAGCATGTAGAAGAAGCAGGAGTATTTCCTGGCTTGAGAGAGGAGTTTGTTATTATTGGTGAGAATGAATCTGATGATAGCTTGATTTTGAGCTTGAGATCCATTCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGACGTTGTTGTCAAGGGTAAGGTGGTCGATGCTAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTTGTCCCTTTCTCACAGATATCAACGAAATCAAATGCTGAAGAGCTTCTCAGCAAGGAGCTTCCTCTAAAGTTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAACTTGGAATTGGATCAGTGGTCACCGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGATATTGGTGGAATCAATGGTCTTCTTCATGTTAGTCAAATCAGTCATGACCGGATATCGGATATTGCAACAGTCCTTCAGCCTGGGGACTCTCTCAAGGTCATGATATTGAGCCACGATCGTGAGAGAGGCCGAGTTAGTCTCTCTACCAAGAAGTTAGAGCCCACTCCTGGGGACATGATTCGCAATCCAAAGCTTGTTTTTGAGAAGGCTGAGGAGATGGCACAAACGTTCAGGCAAAGAATAGCCCAGGCAGAGGCATTGGCACGTGCAGACATGCTTAGGTTTCAGCCTGAGAGTGGTTTGACTTTGACTACTGATGGAATATTGGGACCAATTACTCCAGAGTTACCTGTAGAGGGTTTAGATTTGAATGATGTACCTCCAGCTGAAGAGTGA

Protein sequence

MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE

Homology

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BLAST of Cucsat.G1310 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 3.8e-192
Identity = 346/414 (83.57%), Postives = 384/414 (92.75%), Query Frame = 0


Query: 1   MASMAQQFT-GLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKL 60
           MAS+AQQ   GLRC PLS+S LSKPFS KH L K R  P+ +AV    + + QTRER KL
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTL-KPRFSPIVSAV---AVSNAQTRERQKL 60

Query: 61  KEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDIT 120
           K++FE+AYERCRNAP+EG+SFT++DFH AL+KYDF+SE+G++VKGTVFCTD NGALVDIT
Sbjct: 61  KQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDIT 120

Query: 121 AKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWER 180
           AKSSAYLPL EACI+RIK+VEEAG+ PG+REEFVIIGENE+DDSLILSLR IQY+LAWER
Sbjct: 121 AKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWER 180

Query: 181 CRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEV 240
           CRQLQAEDVVVKGK+V ANKGGVVA+VEGLRGFVPFSQIS+KS+AEELL KE+PLKFVEV
Sbjct: 181 CRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEV 240

Query: 241 DEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300
           DEEQSRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 241 DEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300

Query: 301 ISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360
           +SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF
Sbjct: 301 VSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360

Query: 361 RQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 414
           RQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+T +LP EGLDL+ VPPA E
Sbjct: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVE 410

[Close]

BLAST of Cucsat.G1310 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 5.4e-178
Identity = 323/415 (77.83%), Postives = 377/415 (90.84%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPL-SSSRLSKPFSSKHFLNKSRSL-PVQAAVISGPIPSPQTRERFK 60
           MAS+AQQF+GLRC+PL SSSRLS+  S     NKS S+ P   A ++  + S QT+ER +
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERLE 60

Query: 61  LKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDI 120
           LK++FE+AYERCR +P+EG++FT++DF AA+E+YDF+SE+GT+VKGTVF TD NGALVDI
Sbjct: 61  LKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDI 120

Query: 121 TAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWE 180
           +AKSSAYL +++ACIHRIKHVEEAG+ PG+ EEFVIIGENESDDSL+LSLR+IQY+LAWE
Sbjct: 121 SAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWE 180

Query: 181 RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVE 240
           RCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVE
Sbjct: 181 RCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVE 240

Query: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD 300
           VDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHD
Sbjct: 241 VDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHD 300

Query: 301 RISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360
           R+SDIATVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
Sbjct: 301 RVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360

Query: 361 FRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL--NDVPPA 412
           FRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+  ELP +G+DL  +D+P A
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]

BLAST of Cucsat.G1310 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 301.6 bits (771), Expect = 1.4e-80
Identity = 157/301 (52.16%), Postives = 216/301 (71.76%), Query Frame = 0


Query: 71  RNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQE 130
           ++ P   I FT EDF A L++YD+    G  V GTVF  +  GAL+DI AK++A+LP+QE
Sbjct: 4   QDIPAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQE 63

Query: 131 ACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVV 190
             I+R++  EE      +RE F++  ENE D  L LS+R I+Y  AWER RQLQ ED  V
Sbjct: 64  MSINRVESPEEVLQPSEMREFFILSDENE-DGQLTLSIRRIEYMRAWERVRQLQTEDATV 123

Query: 191 KGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSN 250
           + +V   N+GG +  +EGLRGF+P S IST+   E+L+ +ELPLKF+EVDE+++RLVLS+
Sbjct: 124 RSEVFATNRGGALVRIEGLRGFIPGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSH 183

Query: 251 RKAMADSQA-QLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQP 310
           R+A+ + +  +L +G VV G V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V   
Sbjct: 184 RRALVERKMNRLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNV 243

Query: 311 GDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI-AQAEA 370
            D +KVMI+  D ERGR+SLSTK+LEP PGDM+RNP++V+EKAEEMA  +R+++  QAE 
Sbjct: 244 NDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKLKQQAEG 303

[Close]

BLAST of Cucsat.G1310 vs. ExPASy Swiss-Prot
Match: P73530 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1A PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.1e-77
Identity = 154/312 (49.36%), Postives = 212/312 (67.95%), Query Frame = 0


Query: 78  ISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIK 137
           I FTLEDF A L+KYD+    G  V GTVF  ++ GAL+DI AK++AY+P+QE  I+R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 138 HVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDA 197
             EE  + P    EF I+ +   D  L LS+R I+Y  AWER RQLQAED  V+  V   
Sbjct: 70  DPEEV-LQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFAT 129

Query: 198 NKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADS 257
           N+GG +  +EGLRGF+P S IS +   E+L+ ++LPLKF+EVDEE++RLVLS+R+A+ + 
Sbjct: 130 NRGGALVRIEGLRGFIPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVER 189

Query: 258 QAQ-LGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVM 317
           +   L +  VV G+V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V    D +KVM
Sbjct: 190 KMNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVM 249

Query: 318 ILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLR 377
           I+  D ERGR+SLSTK+LEP PG M+++  LV E A+EMA+ FRQ+      LA A  + 
Sbjct: 250 IIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQK-----RLAEAQGIP 309

Query: 378 FQPESGLTLTTD 389
           ++P + +  T D
Sbjct: 310 YEPPTSVDDTDD 315

[Close]

BLAST of Cucsat.G1310 vs. ExPASy Swiss-Prot
Match: O33698 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsA PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.4e-46
Identity = 100/282 (35.46%), Postives = 167/282 (59.22%), Query Frame = 0


Query: 83  EDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEA 142
           +DF  ALE    DS+ G  V+G V     +GA +DI  K+ A+LP +EA +H +  + EA
Sbjct: 12  DDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDL-EA 71

Query: 143 GVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGV 202
            +      EF++I +   D  + +SLR++  + AW R  +LQ     V+ KV  +NKGGV
Sbjct: 72  HLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGV 131

Query: 203 VAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QL 262
            A +EGLR F+P S ++ K + + L  K L + F+EV+    +LVLS R+A   +   ++
Sbjct: 132 TADLEGLRAFIPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREI 191

Query: 263 GIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHD 322
            +G ++ G V  LKP+G F+D+GG   LL ++QIS   ++D+  + + GD ++ ++++ D
Sbjct: 192 EVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAID 251

Query: 323 RERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 364
             +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Sbjct: 252 NTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]

BLAST of Cucsat.G1310 vs. NCBI nr
Match: XP_004147619.1 (30S ribosomal protein S1, chloroplastic [Cucumis sativus] >KAE8650407.1 hypothetical protein Csa_009967 [Cucumis sativus])

HSP 1 Score: 796 bits (2056), Expect = 3.76e-290
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. NCBI nr
Match: XP_008438974.1 (PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo])

HSP 1 Score: 786 bits (2030), Expect = 3.45e-286
Identity = 406/413 (98.31%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. NCBI nr
Match: XP_038878013.1 (30S ribosomal protein S1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 772 bits (1994), Expect = 1.06e-280
Identity = 396/413 (95.88%), Postives = 408/413 (98.79%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSS+H  +K+RSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSRHLQSKARSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGI+FTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGIAFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVIIGENE+DDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENEADDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDI TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIGTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. NCBI nr
Match: KAA0052175.1 (30S ribosomal protein S1 [Cucumis melo var. makuwa] >TYK05147.1 30S ribosomal protein S1 [Cucumis melo var. makuwa])

HSP 1 Score: 772 bits (1994), Expect = 2.71e-280
Identity = 406/438 (92.69%), Postives = 410/438 (93.61%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV------------------ 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV                  
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 -------KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVII 180
                  KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300
           SQISTKS AEELL+KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 413
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]

BLAST of Cucsat.G1310 vs. NCBI nr
Match: XP_022138241.1 (30S ribosomal protein S1, chloroplastic [Momordica charantia])

HSP 1 Score: 761 bits (1966), Expect = 1.95e-276
Identity = 390/413 (94.43%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLS PFS +H  NK+RSLPV AAVIS PIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPG+REEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL+DVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. ExPASy TrEMBL
Match: A0A1S3AXL6 (30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 PE=4 SV=1)

HSP 1 Score: 786 bits (2030), Expect = 1.67e-286
Identity = 406/413 (98.31%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. ExPASy TrEMBL
Match: A0A5A7UEP7 (30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00520 PE=4 SV=1)

HSP 1 Score: 772 bits (1994), Expect = 1.31e-280
Identity = 406/438 (92.69%), Postives = 410/438 (93.61%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAAVISGPIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV------------------ 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKV                  
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 -------KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVII 180
                  KGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAG+FPGLREEFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300
           SQISTKS AEELL+KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 413
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]

BLAST of Cucsat.G1310 vs. ExPASy TrEMBL
Match: A0A6J1C966 (30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009464 PE=4 SV=1)

HSP 1 Score: 761 bits (1966), Expect = 9.45e-277
Identity = 390/413 (94.43%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLS PFS +H  NK+RSLPV AAVIS PIPSPQT+ERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAG+FPG+REEFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KS AEELL+KELPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL+DVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. ExPASy TrEMBL
Match: A0A0A0L5E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168960 PE=4 SV=1)

HSP 1 Score: 753 bits (1945), Expect = 1.29e-273
Identity = 394/413 (95.40%), Postives = 398/413 (96.37%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIST       L  +L + ++E  
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTVMLIFHFLPPQLSIGYIE-- 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
             QSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI
Sbjct: 241 --QSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 409

[Close]

BLAST of Cucsat.G1310 vs. ExPASy TrEMBL
Match: A0A6J1F6H4 (30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442576 PE=4 SV=1)

HSP 1 Score: 750 bits (1936), Expect = 3.52e-272
Identity = 380/413 (92.01%), Postives = 403/413 (97.58%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60
           MASMAQQF GLRCAPLSSSRLSKPFSS+H  N++RSLPVQAAVI+ PIPSPQ +ERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120
           E+FEEAYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG++PGLR+EFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKS AEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413
           QRIA AEA+ARADML+FQPESGLTLTTDGILGP+TPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Cucsat.G1310 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 625.2 bits (1611), Expect = 3.8e-179
Identity = 323/415 (77.83%), Postives = 377/415 (90.84%), Query Frame = 0


Query: 1   MASMAQQFTGLRCAPL-SSSRLSKPFSSKHFLNKSRSL-PVQAAVISGPIPSPQTRERFK 60
           MAS+AQQF+GLRC+PL SSSRLS+  S     NKS S+ P   A ++  + S QT+ER +
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERLE 60

Query: 61  LKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDI 120
           LK++FE+AYERCR +P+EG++FT++DF AA+E+YDF+SE+GT+VKGTVF TD NGALVDI
Sbjct: 61  LKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDI 120

Query: 121 TAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWE 180
           +AKSSAYL +++ACIHRIKHVEEAG+ PG+ EEFVIIGENESDDSL+LSLR+IQY+LAWE
Sbjct: 121 SAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWE 180

Query: 181 RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVE 240
           RCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVE
Sbjct: 181 RCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVE 240

Query: 241 VDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD 300
           VDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHD
Sbjct: 241 VDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHD 300

Query: 301 RISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360
           R+SDIATVLQPGD+LKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
Sbjct: 301 RVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT 360

Query: 361 FRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDL--NDVPPA 412
           FRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+  ELP +G+DL  +D+P A
Sbjct: 361 FRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]

BLAST of Cucsat.G1310 vs. TAIR 10
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 106.7 bits (265), Expect = 4.6e-23
Identity = 66/205 (32.20%), Postives = 121/205 (59.02%), Query Frame = 0


Query: 165 ILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNA 224
           +LS R     +AW R RQ++  +  ++ K+ + N GG++  +EGLR F+P  ++  K N 
Sbjct: 261 LLSSRRYFRRIAWHRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNT 320

Query: 225 ----EELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAF 284
               +E + +   ++   ++E+++ L+LS +  +A  +  L  G+++ GTV  + PYGA 
Sbjct: 321 FTELKENVGRRFLVQITRLNEDKNDLILSEK--VAWEKLYLREGTLLEGTVVKILPYGAQ 380

Query: 285 IDIG--GINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTP 344
           + +G    +GLLH+S I+  RI  ++ VLQ  +S+KV+++       ++SLS   LE  P
Sbjct: 381 VKLGDSSRSGLLHISNITRRRIGSVSDVLQVDESVKVLVVK-SLFPDKISLSIADLESEP 440

Query: 345 GDMIRNPKLVFEKAEEMAQTFRQRI 364
           G  I + + VF +AEEMA+ +R+++
Sbjct: 441 GLFISDREKVFTEAEEMAKKYREKM 462

[Close]

BLAST of Cucsat.G1310 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-21
Identity = 58/180 (32.22%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 177 WERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEE---------- 236
           W+  +         +G+V   N GG++     L GF+P+ Q+S   + +E          
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156

Query: 237 -LLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQSLKPYGAFIDIG 296
            L+  +LP+K V+ DEE  +L+LS + A+    +Q + +G V  G V S++ YGAFI + 
Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216

Query: 297 ------GINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTP 339
                  + GL+HVS++S D + D+  VL+ GD ++V++ + D+E+ R++LS K+LE  P
Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 276

[Close]

BLAST of Cucsat.G1310 vs. TAIR 10
Match: AT5G14580.1 (polyribonucleotide nucleotidyltransferase, putative )

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-11
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 237 VEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVTGTVQSLKPYGAFIDI-GGIN 296
           + +D     +V  N+  M  +Q Q        L +G V  GTV S+K YGAF++  GG  
Sbjct: 643 LSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQ 702

Query: 297 GLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTP 339
           GLLH+S++SH+ +S ++ VL  G  +  M +  D  RG + LS K L P P
Sbjct: 703 GLLHMSELSHEPVSKVSDVLDIGQCITTMCIETD-VRGNIKLSRKALLPKP 752

[Close]

BLAST of Cucsat.G1310 vs. TAIR 10
Match: AT3G11964.1 (RNA binding;RNA binding )

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-10
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 0


Query: 260  QLGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDSLKVMI 319
            +L +G +++G ++ ++P+G FIDI   G+ GL H+SQ+S DR+ ++    + G+S++  I
Sbjct: 1431 KLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKI 1490

Query: 320  LSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRF 379
            L  D E+ R+SL  K      GD  +   L  +              ++E LA  D   F
Sbjct: 1491 LKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPIND--PKSEVLAAVDDFGF 1550

Query: 380  QPESGLTLTTDGILGPI--TPELPVEGLDLNDV 409
            Q  SG    T  +L  +     +P   +DL+D+
Sbjct: 1551 QETSG---GTSLVLAQVESRASIPPLEVDLDDI 1578

The following BLAST results are available for this feature:

BLAST of Cucsat.G1310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29344	3.8e-192	83.57	30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=...	[more]
Q93VC7	5.4e-178	77.83	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ...	[more]
P46228	1.4e-80	52.16	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA...	[more]
P73530	3.1e-77	49.36	30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]
O33698	8.4e-46	35.46	30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805...	[more]

BLAST of Cucsat.G1310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147619.1	3.76e-290	100.00	30S ribosomal protein S1, chloroplastic [Cucumis sativus] >KAE8650407.1 hypothet...	[more]
XP_008438974.1	3.45e-286	98.31	PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo]	[more]
XP_038878013.1	1.06e-280	95.88	30S ribosomal protein S1, chloroplastic-like [Benincasa hispida]	[more]
KAA0052175.1	2.71e-280	92.69	30S ribosomal protein S1 [Cucumis melo var. makuwa] >TYK05147.1 30S ribosomal pr...	[more]
XP_022138241.1	1.95e-276	94.43	30S ribosomal protein S1, chloroplastic [Momordica charantia]	[more]

BLAST of Cucsat.G1310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXL6	1.67e-286	98.31	30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 ...	[more]
A0A5A7UEP7	1.31e-280	92.69	30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1C966	9.45e-277	94.43	30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0L5E7	1.29e-273	95.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168960 PE=4 SV=1	[more]
A0A6J1F6H4	3.52e-272	92.01	30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Cucsat.G1310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G30510.1	3.8e-179	77.83	ribosomal protein S1	[more]
AT1G71720.1	4.6e-23	32.20	Nucleic acid-binding proteins superfamily	[more]
AT3G23700.1	3.3e-21	32.22	Nucleic acid-binding proteins superfamily	[more]
AT5G14580.1	1.4e-11	36.94	polyribonucleotide nucleotidyltransferase, putative	[more]
AT3G11964.1	2.6e-10	29.41	RNA binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..157
None	No IPR available	GENE3D	2.40.50.140		coord: 42..125 e-value: 1.0E-23 score: 85.0
None	No IPR available	PANTHER	PTHR10724	30S RIBOSOMAL PROTEIN S1	coord: 5..201
None	No IPR available	PANTHER	PTHR10724:SF11	30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC	coord: 5..201
None	No IPR available	CDD	cd05692	S1_RPS1_repeat_hs4	coord: 52..120 e-value: 2.60518E-33 score: 111.994
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 50..120 e-value: 3.1E-25 score: 99.8
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 51..120 e-value: 3.9E-18 score: 65.6
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 52..120 score: 22.270998
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 51..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1310.T1	Cucsat.G1310.T1	mRNA
Cucsat.G1310.T2	Cucsat.G1310.T2	mRNA
Cucsat.G1310.T3	Cucsat.G1310.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0000481	maturation of 5S rRNA
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0034337	RNA folding
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding