Cucsat.G12964 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12964
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	EngB-type G domain-containing protein
Location	ctg1838: 7995843 .. 7998735 (-)
RNA-Seq Expression	Cucsat.G12964
Synteny	Cucsat.G12964

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACAAAACGTTTTGGTTAGCATGATCGACAAGTCGTAGTCTCGAGGCAACTCGTACGACAAGTCGAACTCTTTATCAACTAAGCAGCCTTCTGTACATAGGCAAATGGTCCGACAAGAACCCACCGCATTTTCATCTTCAAAAAACTTCCACTCAGAGCCGAGCAAGTGCTCAAAGTCACAGAGATGGTTCTCTCTCACCTCTCTAGAATCAACAACTTTCTCTTTACTTCACCAATTCATCGAAATTTCAGCTTATTTGCAAAAACCAATAAACCCATTATCGCGGCAACAGGAGCCCCCATTCTCACATCGACCCCATTCCCCGTCCCCAAATCCACTCTCACAGCCGCCGAACCAATTCCTATCACCGAATTTACAGAGTATCCGGAAGAAACCCAGCTACCCATTTCCCCTGAGAAGCTATTTGTGCCGCCGGATACTGATATCTCCGGCGGCGGGGGGGCAAGAATCTTGAAGGGATCGAACATTGTGTTGGGTCGGTACGCAAGAGATGCGCAAGTTTCTCAGGCGGATTTTGTAAAGAGTAGTGTGAGAACTGAGGACTGCCCTTCTGATGGGCTTCCTGAATTTGCCCTTGTTGGGCGCTCGAATGTGGGGAAATCATCTCTGTTGAATTCACTCGTTCGGCGGAAGAAGCTCGCTCTCACCTCCAAGAAACCAGGTGAGTGGTTTGTTCTGACCCAAGTTCATCTTGATTAATTGGACTGTGAAGTCACTGTAGTCGCAAGGAAAAAATGTAGTTCCATCCAATAGAATCCATGAGAATTCTCTAGCTCTTGTCATTTTTTTTTTTTTTTTGTGTAATTTCAAACTATGTTCAATATGAATATGGATAAAAGAATTAGAGAGCTGTACAATGAAATAGAAGATAATTGTACAATATAGCTTGAACAGAACAAAAACCTTAACAGCTAGTGACCTAGTAGAAGATCCACTAATCAAAGCTTTGTAAGTTAGGATGATTCTTTATTTCCAGTGCTCTGCTTGGTTCTATTACATCTATGGTGCTGCAATGCCATTAATTTTGACCTTATAAAATATCTGCTCGATTAATTGGATCTCTCTCCATTGTCTGTCTTTATTCATTAAGTTTTTGTTGTTTTGAATTATCATTTTCCCCATGAGAATCCGACAGACATGTTAAACCCACATCCAATTTACGGATGTAAGTTAGGTACAGAGCAAAAAAGGAAGGAAGGAAGGGAGAACCTGCTCTTGTAGTCCGTCTTGGATACAAATATCATACATGAACATAAAGATGCTGAAGCTTTTTCTGATTTGCCTTATGATTGTCTATATAGAAGGAAAAGACAGAATGCTTTTGAATGTAAACACGTATATGTGAGCTAAATTATTGGAAGTGAAAGGACTTATTTGCATTATAGTTGTTGTTGGACCATATGCCTTTTATGTTATGACGTACAAGGGGTCTATATGTACTAAGGAATAGTGACAAGGGGGTTCGTTGGTGACCAAATATTATAGGCTCAAGTGGTTATCCTACGAAAACAGTTGAAGTGTGTGCAATGTTAAAGGAAAAAAGTGGGGGAGAAGAGTTTGGCATGTAAACATTGTTTATGTGAGCTTCAAACCTCTTGGATGTGTGAAATCTCTCGTACTCTTTAGACACAGACAGTCTTGCCCTATTGTTTTATTACTTAATCAGGTTTTTGGATATGGACATAAACATTGTTGTGATTTCTTGCAGGAAAGACACAGTGCATAAACCACTTTCGAATTAACGATAGTTGGTACTTGGTCGATTTGCCTGGATATGGGTATGTCTCAACTTCAAGTTGCGTCGATATTTGTCAAAAGATCTCTGACTCTTAAACTCAATTTTAAGTGATTTGCATAGCGATGGGATACAAGTTCACTCTCCAAATTTTTTCCACGTGCGACTCCTACATGAATGAATGTCAATGAGATTTGTTTCTTCCTCCTTTTTAGGTATGCAGCTGCACCACAGGAACTCCGAACAGATTGGAACAAGTTTACCAGAGACTATTTTCTGAATCGGTCCACATTGGTTTCAGTTTTCCTTCTCATAGATGCAAGCATTCCTGCCAAACCAATTGATCTTGACTATGCTAGTTGGTTGGGTCAGAATCAGGTAATATTCTCTTTGTTTTAGGGGTCTTATAGAAGGAAAATATTTAAATTGCATATCCTTTGTTTTCTTTAAAAGACAACTTTTAAAAAGTTGAAAGTATAGACGACCACAAAAAATAACAAAAACAAGAGCTGATACAAAAGCATAATAGATACCAAATTCTAGAAGTAGAGAGACTGAGGTGGTGAATAATTTCAGATTCTCTTCCAATTTCTATAAATAAAAAAAAGAGAGGATAATCCCTAAGCAATAAAGACAAACAGATTCTTGCAAGAGGTTCGAAGTATGCATTGCTACAGACCGTCAGACCTCCTACCGAGACAAGGCCTTTTCTTGGGAAGGCCAATTTCGTTTATGTCAAATTTGACAACTAAAGATTCTAATAGAACTCGAATATATCGAAAGATAAACGATAATGAAAATATAAGATAAACCAAGTGTTCAAGGTACTAGAACCCTCCCAGTCTTGAGATACTTTCAAGCCCTACTTCATATTCCAAAATATTGCTTATCCTTCCCCTACCTTACCTAGTGTATTTATAATCAAATTTACTTAACAAACTCCTTCAACTCATTGCTAATGTACTGTTAAGACTCTTCAACCTGAAACTCAGAAAAATCCCAACAATGGCCAAACAGAGGCAGCACTCTGCTATAATATATTGCAATATCAACCAAGAGTTCTACAACCTAACATACAATCAAAGATGAAAACAAGAAAGCAAAATACAAAATAAAGATGGAAATAAACTCAACTCCTTTGATAAGGCTGGAAACCTTCCCCTTTAAAGCTTACATTAGCTTTTACTGAAAGATACCTAATTCAGCAATCCTAAAAATTATTCCCTATTTATGCCAGCAAACCAAGTTGGCTCAGGTATTTCCTTCCTTTCCATTCAGCTCCCCAAATGAATTATTTTGGGAATTTCCCTTCTTGCCTCTTCTTTACAAGTGTGAAGGATTGGAGGTCTAGCACATACCTCTTAATATTCTTCCAATACCATTCTAATCAGATCCCTCACCTTTTGAAAACAAAGTTTGACAAGTGTGCATAATTGAGATTTCTTCTAAAACCCAAGTTCCAATTAGTATGGAAATCATCCAAAGTATAATATCGCTCTTCGTCATCATAGTAGGGACTAGGGAGATTATAGAGCCCGTGAAGAGATCTAAAGATTTACCTTCATTTAGAACAGTGTTTGAAGTTTCCAACTTTTTTTTCTCCATTACCAAGCTTAAAAGCAAATGCAGCTCAACTGTCCATTCTCCAAAGGAAATCACTTTCCCAAAACAAACCTCCCCATTCTTTTTAATAACAATGTGCCTAGTCATGACACGCTTCTATGGCAAGCATGTAATCTTCCAATTAATAAGGTGACTTCCTTTGATTTGCTAAAAGAGGAAAAAACCTAAGATAAGCTTTCTGTTGCATGCCTCCATTGATAACCCAAGTCTGATTGAAAAGTCTCGTTTGACTGATTGGGTCCTCCTTTCTCTTTGCTAATTTGCTCTTTTGATTGAGTACCCCCATTTCTCTTCTTAAGATAGTGCATCGTGATTTTTTAACAATGAATAGTAGAAATTTAGCTTTTACTTCAATTGTTGATGTCTTGGTTTTCAAGAAAAATTGACATAGAATGGTTTCTATAGATTCCAATGACGATAATATTCACGAAATGTGACAAACGGAAGAAGAAAAAGAATGGGGGAAAAAGACCAGAAGAAAATGTGAGCGACTTTCAGGAACTTATAAGTGGTTTTTTCCAAACGACTCCGCCGTGGATTATGACTAGCAGTGTCACCCATCAAGGTCGGGATGAAATTCTTCTACATATTGCTCAGCTGAGGAACTACTGGCTCAAGCACTGAATTTTTTTTTGCAGCCTCATCTTCTTGAATCAACCAGGTACAATGCATTGTTTGTTATGATTCCTAATGACGTATTGACACACGAAAAGTCGGTCTTATGATTTTGAACTTTTTACTATTAAAATTAACAGTAAATGCAAATGTTTCAGCTGGAAGATGCTTCTCAACGCTATTTGAATTGCTTGATCTTGACTCAAAATGAGAATGTGTTGATTGAATATGAATCTTGAATAGCCTAAGCTGTTTGATCAAGAACATGAATTTTGGAGAGTTAACAAAGCAACCATGCTAGCAATAATGGCTTAATAGTTGCACAATTTTCATTACGTTCCTACTTAAAAACTTCAAACATTCAATAGAATGGAAGATTGGTGGAAAGTTACTGTTATCTTGTGGGTGAATACTCTTCTCAGTTTGCTATTAGTTGTTAGAGCAATTGGATCCCATTTATTCATATTCTGGATAAAGGACAGCTTACCCCCTTTGTCCAAACTTGTAATATGATGTGTATAGTATAGCAAAGTTGTAGGGAAATTGGAAAAAAACAAGATTTTTTTGGGTGGGTAAAAGACTTTTGAGATGCTTTTTAAAAATAATGAATTTTGGGTAAAAAATTAGCATATGAAAAGTTCAAAGTGCCCTTTAGTTTTAGAAAAACCCTAACAGTGAATATGTGCAGTGATTCCTTCTCCCTCTCCCTCGCGTGCGATTCTTCTCAGTGAACGAGGTTGTGATGAACAACGAGCACGGAGCTTCAGACGGTGGCACAGCCAATGGAGGTGGAGACTTTGACGGTGGCGACTAAGTTGCGGTTCAACAACTTGGATGGCTGCTAAACTCTTCTATTCGACATCTTAATGAAGTGATACGATGTGTTGGGAGATTTAATATCTCAAGTGTACACTGTACAAAAAACTTAAATTAACGGCAGATTGTGATCCCAGACATTCAACTTTTAATAGCTAACATATGGTTTAGATTCTGTAACACTATGTCAAGAAAACAAATAACAGGACAAATACCATCTTCAATTGCTGTGTTTCATACATATCCAAGAAATAAGAATAATGAAAATAACTAACATGTTCAAAGTA

Coding sequence (CDS)

ATGGTTCTCTCTCACCTCTCTAGAATCAACAACTTTCTCTTTACTTCACCAATTCATCGAAATTTCAGCTTATTTGCAAAAACCAATAAACCCATTATCGCGGCAACAGGAGCCCCCATTCTCACATCGACCCCATTCCCCGTCCCCAAATCCACTCTCACAGCCGCCGAACCAATTCCTATCACCGAATTTACAGAGTATCCGGAAGAAACCCAGCTACCCATTTCCCCTGAGAAGCTATTTGTGCCGCCGGATACTGATATCTCCGGCGGCGGGGGGGCAAGAATCTTGAAGGGATCGAACATTGTGTTGGGTCGGTACGCAAGAGATGCGCAAGTTTCTCAGGCGGATTTTGTAAAGAGTAGTGTGAGAACTGAGGACTGCCCTTCTGATGGGCTTCCTGAATTTGCCCTTGTTGGGCGCTCGAATGTGGGGAAATCATCTCTGTTGAATTCACTCGTTCGGCGGAAGAAGCTCGCTCTCACCTCCAAGAAACCAGGAAAGACACAGTGCATAAACCACTTTCGAATTAACGATAGTTGGTACTTGGTCGATTTGCCTGGATATGGGTATGCAGCTGCACCACAGGAACTCCGAACAGATTGGAACAAGTTTACCAGAGACTATTTTCTGAATCGGTCCACATTGGTTTCAGTTTTCCTTCTCATAGATGCAAGCATTCCTGCCAAACCAATTGATCTTGACTATGCTAGTTGGTTGGGTCAGAATCAGATTCCAATGACGATAATATTCACGAAATGTGACAAACGGAAGAAGAAAAAGAATGGGGGAAAAAGACCAGAAGAAAATGTGAGCGACTTTCAGGAACTTATAAGTGGTTTTTTCCAAACGACTCCGCCGTGGATTATGACTAGCAGTGTCACCCATCAAGGTCGGGATGAAATTCTTCTACATATTGCTCAGCTGAGGAACTACTGGCTCAAGCACTGA

Protein sequence

MVLSHLSRINNFLFTSPIHRNFSLFAKTNKPIIAATGAPILTSTPFPVPKSTLTAAEPIPITEFTEYPEETQLPISPEKLFVPPDTDISGGGGARILKGSNIVLGRYARDAQVSQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLRNYWLKH

Homology

[Close]

BLAST of Cucsat.G12964 vs. ExPASy Swiss-Prot
Match: O81004 (GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 5.7e-39
Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 12  FRYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMT 71
           + +A      +TDW+ FT+ YFLNR +LV V LLIDAS+P + IDLD A+WLG+N +PMT
Sbjct: 176 YGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLIDASVPPQKIDLDCANWLGRNNVPMT 235

Query: 72  IIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQ 131
            +FTKCDK K  K  GKRP+EN+  FQ++I   F+  PPWI+TSSV+  GRDE+LLH++Q
Sbjct: 236 FVFTKCDKMKATK--GKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDELLLHMSQ 295

Query: 132 LRNYW 137
           LRNYW
Sbjct: 296 LRNYW 298

[Close]

BLAST of Cucsat.G12964 vs. ExPASy Swiss-Prot
Match: Q8A8T4 (Probable GTP-binding protein EngB OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=engB PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 12  FRYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMT 71
           + YA   Q+ +        DY L R  + ++F+LID+ +  + IDL++  WLG+N IP +
Sbjct: 79  YGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIPFS 138

Query: 72  IIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQ 131
           IIFTK DK K     G R + N++++   +S  ++  PP+ ++SS    GR EIL +I  
Sbjct: 139 IIFTKADKLK-----GGRLKMNINNYLRELSKEWEELPPYFISSSENRTGRTEILDYIEN 194

Query: 132 L 133
           +
Sbjct: 199 I 194

[Close]

BLAST of Cucsat.G12964 vs. ExPASy Swiss-Prot
Match: Q5LDL2 (Probable GTP-binding protein EngB OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) OX=272559 GN=engB PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-15
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 12  FRYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMT 71
           + YA   Q+ +        DY L R  + ++F+LID+ +  + IDL++  WLG+N IP  
Sbjct: 79  YGYARRGQKGQKQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIPFA 138

Query: 72  IIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQ 131
           IIFTK DK K     G R + N+S +   +   ++  PP+ +TSS    GR E+L +I  
Sbjct: 139 IIFTKADKLK-----GGRLKINISAYLRELRKQWEELPPYFITSSEERLGRTEVLNYIES 194

Query: 132 L 133
           +
Sbjct: 199 I 194

[Close]

BLAST of Cucsat.G12964 vs. ExPASy Swiss-Prot
Match: Q64UN4 (Probable GTP-binding protein EngB OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=engB PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-15
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 12  FRYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMT 71
           + YA   Q+ +        DY L R  + ++F+LID+ +  + IDL++  WLG+N IP  
Sbjct: 79  YGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIPFA 138

Query: 72  IIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQ 131
           IIFTK DK K     G R + N+S +   +   ++  PP+ +TSS    GR E+L +I  
Sbjct: 139 IIFTKADKLK-----GGRLKINISAYLRELRKQWEELPPYFITSSEERLGRTEVLNYIES 194

Query: 132 L 133
           +
Sbjct: 199 I 194

[Close]

BLAST of Cucsat.G12964 vs. ExPASy Swiss-Prot
Match: A6LBY4 (Probable GTP-binding protein EngB OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=engB PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.5e-15
Identity = 41/123 (33.33%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 12  FRYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMT 71
           + +A   +E R    +   +Y L+R  L ++F+L+D    A+ IDL++  WLG++ +P +
Sbjct: 79  YGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQKIDLEFMEWLGESGVPFS 138

Query: 72  IIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQ 131
           IIFTK DK  K      R +EN+  + + +   ++  PP  ++SS   +GRDEIL +I  
Sbjct: 139 IIFTKIDKISK-----GRLKENLKVYTDKLLETWEELPPIFLSSSEKKEGRDEILDYIES 196

Query: 132 LRN 135
           + N
Sbjct: 199 INN 196

[Close]

BLAST of Cucsat.G12964 vs. NCBI nr
Match: XP_004136299.1 (GTP-binding protein At2g22870 [Cucumis sativus] >XP_031739374.1 GTP-binding protein At2g22870 [Cucumis sativus] >KGN60199.1 hypothetical protein Csa_002016 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 3.80e-87
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII
Sbjct: 191 YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 250

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 251 FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 310

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 311 NYWLKH 316

[Close]

BLAST of Cucsat.G12964 vs. NCBI nr
Match: KAA0038722.1 (GTP-binding protein [Cucumis melo var. makuwa] >TYK31334.1 GTP-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (674), Expect = 4.39e-86
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDL+YASWLGQNQIPMTII
Sbjct: 191 YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTII 250

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLH+AQLR
Sbjct: 251 FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHMAQLR 310

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 311 NYWLKH 316

[Close]

BLAST of Cucsat.G12964 vs. NCBI nr
Match: XP_038900017.1 (GTP-binding protein At2g22870 [Benincasa hispida])

HSP 1 Score: 264 bits (674), Expect = 4.83e-86
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFT+DYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII
Sbjct: 194 YAAAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 253

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 254 FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 313

Query: 134 NYWLKH 139
           NYWL+H
Sbjct: 314 NYWLEH 319

[Close]

BLAST of Cucsat.G12964 vs. NCBI nr
Match: XP_023535583.1 (GTP-binding protein At2g22870-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259 bits (663), Expect = 2.55e-84
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTR+YFLNRSTLVSVFLLIDASIPAK IDLDYASWLGQNQIPMTII
Sbjct: 198 YAAAPQELRTDWNKFTRNYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTII 257

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDF ELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 258 FTKCDKRKKKKNGGKRPEENVSDFHELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 317

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 318 NYWLKH 323

[Close]

BLAST of Cucsat.G12964 vs. NCBI nr
Match: XP_022936076.1 (GTP-binding protein At2g22870-like [Cucurbita moschata])

HSP 1 Score: 259 bits (663), Expect = 2.55e-84
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTR+YFLNRSTLVSVFLLIDASIPAK IDLDYASWLGQNQIPMTII
Sbjct: 198 YAAAPQELRTDWNKFTRNYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTII 257

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDF ELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 258 FTKCDKRKKKKNGGKRPEENVSDFHELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 317

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 318 NYWLKH 323

[Close]

BLAST of Cucsat.G12964 vs. ExPASy TrEMBL
Match: A0A0A0LGU2 (EngB-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G888580 PE=3 SV=1)

HSP 1 Score: 266 bits (681), Expect = 1.84e-87
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII
Sbjct: 191 YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 250

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 251 FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 310

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 311 NYWLKH 316

[Close]

BLAST of Cucsat.G12964 vs. ExPASy TrEMBL
Match: A0A5A7T5H0 (GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006340 PE=3 SV=1)

HSP 1 Score: 264 bits (674), Expect = 2.13e-86
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDL+YASWLGQNQIPMTII
Sbjct: 191 YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTII 250

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLH+AQLR
Sbjct: 251 FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHMAQLR 310

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 311 NYWLKH 316

[Close]

BLAST of Cucsat.G12964 vs. ExPASy TrEMBL
Match: A0A6J1F6H7 (GTP-binding protein At2g22870-like OS=Cucurbita moschata OX=3662 GN=LOC111442787 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 1.23e-84
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFTR+YFLNRSTLVSVFLLIDASIPAK IDLDYASWLGQNQIPMTII
Sbjct: 198 YAAAPQELRTDWNKFTRNYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTII 257

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDF ELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 258 FTKCDKRKKKKNGGKRPEENVSDFHELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 317

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 318 NYWLKH 323

[Close]

BLAST of Cucsat.G12964 vs. ExPASy TrEMBL
Match: A0A6J1IKL5 (GTP-binding protein At2g22870-like OS=Cucurbita maxima OX=3661 GN=LOC111476474 PE=3 SV=1)

HSP 1 Score: 258 bits (660), Expect = 3.52e-84
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQELRTDWNKFT++YFLNRSTLVSVFLLIDASIPAK IDLDYASWLGQNQIPMTII
Sbjct: 198 YAAAPQELRTDWNKFTKNYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTII 257

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDF ELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR
Sbjct: 258 FTKCDKRKKKKNGGKRPEENVSDFHELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 317

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 318 NYWLKH 323

[Close]

BLAST of Cucsat.G12964 vs. ExPASy TrEMBL
Match: A0A6J1CLQ0 (GTP-binding protein At2g22870 OS=Momordica charantia OX=3673 GN=LOC111012429 PE=3 SV=1)

HSP 1 Score: 256 bits (654), Expect = 2.52e-83
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 14  YAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTII 73
           YAAAPQ+LRTDWNKFT+DYFL RSTLVSVFLLIDASIPAK IDLDYASWLGQNQIPMTII
Sbjct: 194 YAAAPQDLRTDWNKFTKDYFLKRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTII 253

Query: 74  FTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLR 133
           FTKCDKRKKKKNGGKRPEENVSDFQELISGFF+TTPPWIMTSSVTHQGRDEILLHI+QLR
Sbjct: 254 FTKCDKRKKKKNGGKRPEENVSDFQELISGFFRTTPPWIMTSSVTHQGRDEILLHISQLR 313

Query: 134 NYWLKH 139
           NYWLKH
Sbjct: 314 NYWLKH 319

The following BLAST results are available for this feature:

BLAST of Cucsat.G12964 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81004	5.7e-39	57.60	GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV...	[more]
Q8A8T4	1.2e-15	34.71	Probable GTP-binding protein EngB OS=Bacteroides thetaiotaomicron (strain ATCC 2...	[more]
Q5LDL2	5.7e-15	34.71	Probable GTP-binding protein EngB OS=Bacteroides fragilis (strain ATCC 25285 / D...	[more]
Q64UN4	5.7e-15	34.71	Probable GTP-binding protein EngB OS=Bacteroides fragilis (strain YCH46) OX=2954...	[more]
A6LBY4	7.5e-15	33.33	Probable GTP-binding protein EngB OS=Parabacteroides distasonis (strain ATCC 850...	[more]

BLAST of Cucsat.G12964 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136299.1	3.80e-87	100.00	GTP-binding protein At2g22870 [Cucumis sativus] >XP_031739374.1 GTP-binding prot...	[more]
KAA0038722.1	4.39e-86	98.41	GTP-binding protein [Cucumis melo var. makuwa] >TYK31334.1 GTP-binding protein [...	[more]
XP_038900017.1	4.83e-86	98.41	GTP-binding protein At2g22870 [Benincasa hispida]	[more]
XP_023535583.1	2.55e-84	97.62	GTP-binding protein At2g22870-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936076.1	2.55e-84	97.62	GTP-binding protein At2g22870-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G12964 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGU2	1.84e-87	100.00	EngB-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G888580...	[more]
A0A5A7T5H0	2.13e-86	98.41	GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G...	[more]
A0A6J1F6H7	1.23e-84	97.62	GTP-binding protein At2g22870-like OS=Cucurbita moschata OX=3662 GN=LOC111442787...	[more]
A0A6J1IKL5	3.52e-84	96.83	GTP-binding protein At2g22870-like OS=Cucurbita maxima OX=3661 GN=LOC111476474 P...	[more]
A0A6J1CLQ0	2.52e-83	95.24	GTP-binding protein At2g22870 OS=Momordica charantia OX=3673 GN=LOC111012429 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 136..253 e-value: 1.4E-21 score: 76.7
IPR019987	GTP-binding protein, ribosome biogenesis, YsxC	TIGRFAM	TIGR03598	TIGR03598	coord: 116..306 e-value: 6.8E-58 score: 193.4
IPR019987	GTP-binding protein, ribosome biogenesis, YsxC	HAMAP	MF_00321	GTPase_EngB	coord: 121..310 score: 24.251057
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 107..312 e-value: 5.8E-53 score: 181.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 127..312
None	No IPR available	PANTHER	PTHR11649	MSS1/TRME-RELATED GTP-BINDING PROTEIN	coord: 73..313
None	No IPR available	PANTHER	PTHR11649:SF75	PROTEIN, PUTATIVE, EXPRESSED-RELATED	coord: 73..313
IPR030393	EngB-type guanine nucleotide-binding (G) domain	PROSITE	PS51706	G_ENGB	coord: 132..312 score: 36.012215
IPR030393	EngB-type guanine nucleotide-binding (G) domain	CDD	cd01876	YihA_EngB	coord: 135..309 e-value: 8.42639E-67 score: 205.052

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12964.T1	Cucsat.G12964.T1	mRNA
Cucsat.G12964.T5	Cucsat.G12964.T5	mRNA
Cucsat.G12964.T7	Cucsat.G12964.T7	mRNA
Cucsat.G12964.T3	Cucsat.G12964.T3	mRNA
Cucsat.G12964.T2	Cucsat.G12964.T2	mRNA
Cucsat.G12964.T6	Cucsat.G12964.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046872	metal ion binding