Cucsat.G12853 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12853
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NAC domain-containing protein
Location	ctg1838: 5748701 .. 5755613 (-)
RNA-Seq Expression	Cucsat.G12853
Synteny	Cucsat.G12853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAGAACGCCGTACTTTTCCCTCTATATAAAACCCATTTCTCTTACCCCCTCCTAAGTTTCAATTCTCCAACAAAAAAAAAAGAAGGAAAAAAGACAACAAAGAAAAGCCTCAATTCTTGTTCTATCTTTAAAAAATATGGGAGTAGCTGAAAAGGATCCACTTTCAGAGCTTAGTCTGCCGCCGGGATTCCGATTTTACCCAACTGACGAAGAGCTTTTAGTTCAATATCTCTGCCGGAAAGTTGCCGGCCACAATTTCTCCCTTCAAATCATCGGCGACATCGACCTCTATAAATTCGACCCTTGGGTTCTCCCTAGTACGTATTCAGAAAAATATTATATCATTGCCATTTTATTTTTTGTAAATTTAAAATTTGTTAATTACTTAATATTTTTTTATTTATTTGGTTTTGCAGGTAAGGCTATGTTTGGAGAAAAAGAATGGTATTTTTTCAGTCCAAGAGACCGAAAATATCCAAACGGGTCAAGACCTAACCGGGTCGCTGGATCGGGATATTGGAAGGCTACCGGAACCGATAAGATTATTAGTACTCAAGGAAAAAAAGTTGGCATTAAAAAGGCTCTTGTTTTCTATGTTGGGAAAGCTCCTAAAGGAACTAAAACCAATTGGATCATGCATGAATATCGCCTCATTGATACTTCCCGCAAGACCGGTAGTACCAAGGTATATATATATATTAACTAAAATTCTGACTCACTCCAATCAGATTTAATTCAGTCTTTTGAGTTTGAGTTTAGCGGTGGTTTTCTTTTTCTTTATTATTTTGTTTTTTTTTTTTTTGGTATTATTCAGTTGGATGATTGGGTTTTATGCCGAATATACAAGAAGAATTCAAGTGCGCAAAAGCTGCCACGAATGACGAGTAGCATTTCGAGTATGGAATGCAGCAATGGGGGGTCATCGTCCACGTGTTCTTCGTCGCACCTCGACGACGTTCTCGAGTCATTGCCCGAGATTAAAGACGGGTTCTTCAGGTTGCCTAGAGTTAATTCCCTTCTAACTTTACAGCAAGATCATGAGAATCTCAAGTTTCAGAATCATCTTATGGGGTCCACTAATTTCGAGTGGGCTTCCACCGCCGCTGCAACCTCCTTTGAAGGCTACAACTCGGTGGCCGAACTCGCTCCTCTTGCTCAGTCTCAGGCTCCGTCGGGGCTTATTAGTTCCGACATGTATATTCCGGCCGGCCAACCTCCGAGGAGCACGGTGGAGCAGGAAGTACAGAGTGGATTTCAACGGTTTCATAACTTTGGTTGGTTGCAGCAGAATTTGTCCAACTCGGGCGACGGTTTTGGGTTTTGAAAAATGTCTGGTGAGCAGTTTGGCGAGAGTGGGTGGGGTTTTAGGGGAGCGTGTTGGAAGAATCTTTGTGTAGATAATTCTTTGGGCTAACATTTGGGATTTCAAAAAAACGACAAAAAAAATTAGGTCCAAAATTTGAGGCAATTTTTACTCTAATACTTACATCAAATATATTTGCACTTTTGATTTAATGTCCTAATAAATGTTGTAGTTTTTTACCCTATGGTAAATTTTTGTTTCAACATTTTATTAAAAAGGTATTCTCATGGGTCTTAATGAATCATATAATTCAGGAATAATGTTATTTTTTAGTTTTAAATTGTATCAAATTTCAATCTGTGGTACCAATTTACATCCTTTACTGG

Coding sequence (CDS)

ATGGGAGTAGCTGAAAAGGATCCACTTTCAGAGCTTAGTCTGCCGCCGGGATTCCGATTTTACCCAACTGACGAAGAGCTTTTAGTTCAATATCTCTGCCGGAAAGTTGCCGGCCACAATTTCTCCCTTCAAATCATCGGCGACATCGACCTCTATAAATTCGACCCTTGGGTTCTCCCTAGTAAGGCTATGTTTGGAGAAAAAGAATGGTATTTTTTCAGTCCAAGAGACCGAAAATATCCAAACGGGTCAAGACCTAACCGGGTCGCTGGATCGGGATATTGGAAGGCTACCGGAACCGATAAGATTATTAGTACTCAAGGAAAAAAAGTTGGCATTAAAAAGGCTCTTGTTTTCTATGTTGGGAAAGCTCCTAAAGGAACTAAAACCAATTGGATCATGCATGAATATCGCCTCATTGATACTTCCCGCAAGACCGGTAGTACCAAGTTGGATGATTGGGTTTTATGCCGAATATACAAGAAGAATTCAAGTGCGCAAAAGCTGCCACGAATGACGAGTAGCATTTCGAGTATGGAATGCAGCAATGGGGGGTCATCGTCCACGTGTTCTTCGTCGCACCTCGACGACGTTCTCGAGTCATTGCCCGAGATTAAAGACGGGTTCTTCAGGTTGCCTAGAGTTAATTCCCTTCTAACTTTACAGCAAGATCATGAGAATCTCAAGTTTCAGAATCATCTTATGGGGTCCACTAATTTCGAGTGGGCTTCCACCGCCGCTGCAACCTCCTTTGAAGGCTACAACTCGGTGGCCGAACTCGCTCCTCTTGCTCAGTCTCAGGCTCCGTCGGGGCTTATTAGTTCCGACATGTATATTCCGGCCGGCCAACCTCCGAGGAGCACGGTGGAGCAGGAAGTACAGAGTGGATTTCAACGGTTTCATAACTTTGGTTGGTTGCAGCAGAATTTGTCCAACTCGGGCGACGGTTTTGGGTTTTGA

Protein sequence

MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLPSKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFYVGKAPKGTKTNWIMHEYRLIDTSRKTGSTKLDDWVLCRIYKKNSSAQKLPRMTSSISSMECSNGGSSSTCSSSHLDDVLESLPEIKDGFFRLPRVNSLLTLQQDHENLKFQNHLMGSTNFEWASTAAATSFEGYNSVAELAPLAQSQAPSGLISSDMYIPAGQPPRSTVEQEVQSGFQRFHNFGWLQQNLSNSGDGFGF

Homology

[Close]

BLAST of Cucsat.G12853 vs. ExPASy Swiss-Prot
Match: Q9LDY8 (NAC domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=NAC055 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.4e-77
Identity = 128/151 (84.77%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MG+ E DPL++LSLPPGFRFYPTDEEL+V+YLCRK AGH+FSLQ+I +IDLYKFDPWVLP
Sbjct: 1   MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+IST+G++VGIKKALVFY
Sbjct: 61  SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 181
           +GKAPKGTKTNWIMHEYRLI+ SR+ GSTK+
Sbjct: 121 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKL 151

[Close]

BLAST of Cucsat.G12853 vs. ExPASy Swiss-Prot
Match: A0A3Q7HH64 (NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.1e-77
Identity = 130/151 (86.09%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGV E DPL++LSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQII +IDLYKFDPWVLP
Sbjct: 1   MGVQEMDPLTQLSLPPGFRFYPTDEELLVQYLCRKVAGHDFSLQIIAEIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+I+T G+KVGIKKALVFY
Sbjct: 61  SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTDGRKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 181
           +GKAPKGTKTNWIMHEYRL + + KTGS+++
Sbjct: 121 IGKAPKGTKTNWIMHEYRLSEPTTKTGSSRL 151

[Close]

BLAST of Cucsat.G12853 vs. ExPASy Swiss-Prot
Match: Q9C932 (NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.4e-77
Identity = 128/151 (84.77%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MG+ E DPL++LSLPPGFRFYPTDEEL+VQYLCRK AG++FSLQ+I +IDLYKFDPWVLP
Sbjct: 1   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           +KA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST+G++VGIKKALVFY
Sbjct: 61  NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 181
           +GKAPKGTKTNWIMHEYRLI+ SR+ GSTK+
Sbjct: 121 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKL 151

[Close]

BLAST of Cucsat.G12853 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 7.0e-77
Identity = 131/151 (86.75%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGV EKDPL++LSLPPGFRFYPTDEELLVQYLCRKVAG++FSLQ+IGDIDLYKFDPW LP
Sbjct: 1   MGVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+  G++VGIKKALVFY
Sbjct: 61  SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 181
            GKAPKGTKTNWIMHEYRLI+ SR  GS+K+
Sbjct: 121 AGKAPKGTKTNWIMHEYRLIEHSRSHGSSKL 151

[Close]

BLAST of Cucsat.G12853 vs. ExPASy Swiss-Prot
Match: Q9SQL0 (NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-76
Identity = 132/152 (86.84%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGV EKDPL +LSLPPGFRFYPTDEELLVQYLC+KVAGH+F LQIIG+IDLYKFDPWVLP
Sbjct: 1   MGVQEKDPLLQLSLPPGFRFYPTDEELLVQYLCKKVAGHDFPLQIIGEIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+I++QG+KVGIKKALVFY
Sbjct: 61  SKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITSQGRKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRK-TGSTKV 181
           VGKAPKG+KTNWIMHEYRL ++SRK  GS+K+
Sbjct: 121 VGKAPKGSKTNWIMHEYRLFESSRKNNGSSKL 152

[Close]

BLAST of Cucsat.G12853 vs. NCBI nr
Match: XP_004147806.1 (NAC domain-containing protein 72 isoform X2 [Cucumis sativus] >KGN59898.1 hypothetical protein Csa_002477 [Cucumis sativus])

HSP 1 Score: 319 bits (817), Expect = 6.02e-107
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 180
           VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKL 151

[Close]

BLAST of Cucsat.G12853 vs. NCBI nr
Match: KAA0057157.1 (NAC domain-containing protein 72-like [Cucumis melo var. makuwa])

HSP 1 Score: 317 bits (811), Expect = 3.41e-106
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK 179
           VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK 150

[Close]

BLAST of Cucsat.G12853 vs. NCBI nr
Match: XP_008454666.1 (PREDICTED: NAC domain-containing protein 72-like [Cucumis melo])

HSP 1 Score: 317 bits (812), Expect = 3.46e-106
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 180
           VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKL 151

[Close]

BLAST of Cucsat.G12853 vs. NCBI nr
Match: XP_038897025.1 (NAC domain-containing protein 72-like [Benincasa hispida])

HSP 1 Score: 310 bits (795), Expect = 1.42e-103
Identity = 145/151 (96.03%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKV+GH+FSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVSGHHFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGK+VGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKRVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 180
           VGKAPKGTKTNWIMHEYRLID SRKTGS K+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDASRKTGSIKL 151

[Close]

BLAST of Cucsat.G12853 vs. NCBI nr
Match: MBA0676066.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 296 bits (759), Expect = 1.60e-100
Identity = 138/155 (89.03%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGV E DPL++LSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIG+IDLYKF+PW LP
Sbjct: 1   MGVPETDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFNPWDLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+T+G+KVGIKKALVFY
Sbjct: 61  SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKVYIYI 184
           VGKAPKGTKTNWIMHEYRLI+TSRK+GS+KV IY+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIETSRKSGSSKV-IYL 154

[Close]

BLAST of Cucsat.G12853 vs. ExPASy TrEMBL
Match: A0A0A0LDN6 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852470 PE=4 SV=1)

HSP 1 Score: 319 bits (817), Expect = 2.91e-107
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 180
           VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKL 151

[Close]

BLAST of Cucsat.G12853 vs. ExPASy TrEMBL
Match: A0A5A7UR91 (NAC domain-containing protein 72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00250 PE=4 SV=1)

HSP 1 Score: 317 bits (811), Expect = 1.65e-106
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK 179
           VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK 150

[Close]

BLAST of Cucsat.G12853 vs. ExPASy TrEMBL
Match: A0A1S3C0D5 (NAC domain-containing protein 72-like OS=Cucumis melo OX=3656 GN=LOC103495020 PE=4 SV=1)

HSP 1 Score: 317 bits (812), Expect = 1.68e-106
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIGDIDLYKFDPWVLP
Sbjct: 1   MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGDIDLYKFDPWVLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY
Sbjct: 61  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKV 180
           VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKL 151

[Close]

BLAST of Cucsat.G12853 vs. ExPASy TrEMBL
Match: A0A7J8WM49 (NAC domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_017576 PE=4 SV=1)

HSP 1 Score: 296 bits (759), Expect = 7.74e-101
Identity = 138/155 (89.03%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGV E DPL++LSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIG+IDLYKF+PW LP
Sbjct: 1   MGVPETDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFNPWDLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+T+G+KVGIKKALVFY
Sbjct: 61  SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTKVYIYI 184
           VGKAPKGTKTNWIMHEYRLI+TSRK+GS+KV IY+
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIETSRKSGSSKV-IYL 154

[Close]

BLAST of Cucsat.G12853 vs. ExPASy TrEMBL
Match: A0A7J8Z1N7 (NAC domain-containing protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_017701 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 8.64e-101
Identity = 136/150 (90.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 30  MGVAEKDPLSELSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGDIDLYKFDPWVLP 89
           MGV E DPL++LSLPPGFRFYPTDEELLVQYLCRKVAGH+FSLQIIG+IDLYKF+PW LP
Sbjct: 1   MGVPETDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFNPWDLP 60

Query: 90  SKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTQGKKVGIKKALVFY 149
           SKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+T+G+KVGIKKALVFY
Sbjct: 61  SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY 120

Query: 150 VGKAPKGTKTNWIMHEYRLIDTSRKTGSTK 179
           VGKAPKGTKTNWIMHEYRLI+TSRK+GSTK
Sbjct: 121 VGKAPKGTKTNWIMHEYRLIETSRKSGSTK 150

The following BLAST results are available for this feature:

BLAST of Cucsat.G12853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDY8	2.4e-77	84.77	NAC domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=NAC055 PE=2 ...	[more]
A0A3Q7HH64	4.1e-77	86.09	NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 ...	[more]
Q9C932	5.4e-77	84.77	NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 ...	[more]
Q93VY3	7.0e-77	86.75	NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ...	[more]
Q9SQL0	1.2e-76	86.84	NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV...	[more]

BLAST of Cucsat.G12853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147806.1	6.02e-107	99.34	NAC domain-containing protein 72 isoform X2 [Cucumis sativus] >KGN59898.1 hypoth...	[more]
KAA0057157.1	3.41e-106	99.33	NAC domain-containing protein 72-like [Cucumis melo var. makuwa]	[more]
XP_008454666.1	3.46e-106	98.68	PREDICTED: NAC domain-containing protein 72-like [Cucumis melo]	[more]
XP_038897025.1	1.42e-103	96.03	NAC domain-containing protein 72-like [Benincasa hispida]	[more]
MBA0676066.1	1.60e-100	89.03	hypothetical protein [Gossypium aridum]	[more]

BLAST of Cucsat.G12853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDN6	2.91e-107	99.34	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852470 PE=4 SV...	[more]
A0A5A7UR91	1.65e-106	99.33	NAC domain-containing protein 72-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C0D5	1.68e-106	98.68	NAC domain-containing protein 72-like OS=Cucumis melo OX=3656 GN=LOC103495020 PE...	[more]
A0A7J8WM49	7.74e-101	89.03	NAC domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_017576 PE=4 ...	[more]
A0A7J8Z1N7	8.64e-101	90.67	NAC domain-containing protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_01...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 15..139 e-value: 4.7E-37 score: 127.8
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..162 score: 60.232838
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..168 e-value: 2.6E-63 score: 214.2
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 10..163
None	No IPR available	PANTHER	PTHR31719	NAC TRANSCRIPTION FACTOR 56	coord: 1..291
None	No IPR available	PANTHER	PTHR31719:SF172	NAC DOMAIN-CONTAINING PROTEIN 55	coord: 1..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12853.T1	Cucsat.G12853.T1	mRNA
Cucsat.G12853.T2	Cucsat.G12853.T2	mRNA
Cucsat.G12853.T3	Cucsat.G12853.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding