Cucsat.G12654 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12654
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1838: 1845714 .. 1848229 (-)
RNA-Seq Expression	Cucsat.G12654
Synteny	Cucsat.G12654

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATTATGGTGGTAGACAACAACAATATTAAGAAAGAGCCTTCTAAACTCATTCTGCTCATCTATTTTAAAGACTACAAAACTAAACTTCATCTCACATATTGACAAAGATCATTTTCTGTCCACCACTTCAAGGCCACACAGCCTCACACGAAACCTCCAACCCTTCATTCCAAAAAAAAGTCACACCAAGCTCAAGAAATGGCTCCAATTTCTCGAGCTTCTTCAATCAATCGACAATGGCTTCTCTTCTATCACTCTATATTTCCTCCTCCTTCCCATCCCCTCTTCCGCCTCACCGCACTTTCAGCTCCATTTCCCCCCATGGCTCCACCCTCCAAAGCTCTCCAAGAACCACGAACAGTCGAAGAATAACCACGATACCCCTCTCCTTTCGTACCTCCTACCGATTCACCGCTGACCACGAAGACGGAGATGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGGCTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTCAATCGGGTTTGTGATTTCATAATCTCTATTTTCGTTTGGTGGTATCATATCGTTGCTGTGTGTTTGTTTGAATTTGTTTCTGGGTTAGAATCATAGAGGGGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCCGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACTGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGAGTTCTTCTTTTTCTCCATTACAACTCCAATTTTTGCTCTGAAACTTTTTAGTGCTCTTCTGGAACAGAGATTGCTTTCGTAATTCCATTCTTGTTTTTAGTGTATAAACTTTGAAAGGACAAACTTGCTTGCTGATTTAATAATTCAACTTTCTTCTTGTTGTGTCATGTTTTCAAACTTTGAGAGATTTGAGAAGTGGATGATTTACTTTCCATCGGAACTTTTTTTTTTATTTTTATTAAACCTATTTTCTTATAAATTTTACAAAGGGCATATATCATTTTTTAAGTATTAAGAGTTAAAATTTAACAAAATTCCAAAAACAAAACAAGTTTTAATTTAATCTTTTTTTTTGGTCAGCTTTTAAAATTTTGACTTGATTTTAAAAACACTTGAAAAAGATAGCCACATCTAACCTTAGTATTCATACCAAATGATTATCAAATGTAAACTTAAACGTGGAACTTGGGTATGTTTCAAGGACTATATTGAACTAGGAATTGCACTTTTACGTGTTCTTTCCTAGTTAACATTGTTTATTAAATGATATGATGTGGGAAAATCTATAGAATAAATGAATTTGAAGTGACCTATAAATAATGAAAAAGAAAATGTTAATAAAATTTGTTGCGCTTGAATTTTCATTGTTTACCTTTAGAAAAATTAAGGTATTGCACATTCTTTATAAGACAAATGAGTTACTCTTTTCGTTGTCACTTGACTTTGAGATGAAACTCTATAAATTTAATACAACGAATTAACTATTTAATCTCCGGAAGAGTTATAGAGTTAAGAAATCCTTTGACTAAGGCCGTCTTTAAAAGTTCATAACTAAGGTCGGGTTGGTAACTGTTTTGCTCTTTAAAATTAACCCCATAAACACTAGTAACCTCTAAATTTATTCCATTGTTATATGCTTAGCAACGGTTTAAAAAACCAAGCTAAAATCTGAATACTAAAAAAAAAAAGGTAGATCTTAGAAACTTGTTTTTGTTTTTAGAATTTGGCTAAGTATGCATGCAACTTTTTACTTAAAATTGATACAAAAACCATGTAAGGAAGTATAAGTTTATAATCTAAATTTTTAACTTTAAACTACTTGTCCTTGATACTGAAACAAATATGAATGGATGAAATAACATAATGAAATGAAATGATTATTTTGGATATGAAACAGGTGATGAGAGTGTATGTGTCACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATGGAGAAACAAGTTGATGGAAGTACGTGCATTGTTTTTTCTTCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCACTCTTGATGCTACCAAACAACACCTTTTAGCCCTTGATTCCCATTGATATTACTTGTCATTTTCTTTTACAAGCATTCAGGAGATACAAGAAATATCTCACTTTACTAGTACAATAGTATAGGTAGTATTTGGTATCTGTTAGAAACGAACCATTCAAGGTTAAATTATCGATTAAGTTATTTGAACTTTGATGATTGTGTATATTTACTTCATATAACATTTCGTGATTTTAGTTGCGTTTTTTACTTTGAATTTAAGGACATTCTATCTTAAAGCAAAATACTAATGGAAGAATTCCCTCTAAGACAATTGA

Coding sequence (CDS)

ATGGCTTCTCTTCTATCACTCTATATTTCCTCCTCCTTCCCATCCCCTCTTCCGCCTCACCGCACTTTCAGCTCCATTTCCCCCCATGGCTCCACCCTCCAAAGCTCTCCAAGAACCACGAACAGTCGAAGAATAACCACGATACCCCTCTCCTTTCGTACCTCCTACCGATTCACCGCTGACCACGAAGACGGAGATGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGGCTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTCAATCGGGTTTGTGATTTCATAATCTCTATTTTCGTTTGGTGGTATCATATCGTTGCTGTGTGTTTGTTTGAATTTGTTTCTGGGTTAGAATCATAG

Protein sequence

MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLHHLFNRVCDFIISIFVWWYHIVAVCLFEFVSGLES

Homology

[Close]

BLAST of Cucsat.G12654 vs. NCBI nr
Match: XP_004136604.1 (uncharacterized protein LOC101210744 [Cucumis sativus] >KGN59378.1 hypothetical protein Csa_001543 [Cucumis sativus])

HSP 1 Score: 254 bits (650), Expect = 3.86e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA
Sbjct: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60

Query: 61  DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120
           DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH
Sbjct: 61  DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120

Query: 121 HLFNR 125
           HLFNR
Sbjct: 121 HLFNR 125

[Close]

BLAST of Cucsat.G12654 vs. NCBI nr
Match: XP_008443170.1 (PREDICTED: uncharacterized protein LOC103486836 [Cucumis melo] >KAA0053937.1 Uncharacterized ypuF [Cucumis melo var. makuwa] >TYK25467.1 Uncharacterized ypuF [Cucumis melo var. makuwa])

HSP 1 Score: 226 bits (576), Expect = 7.21e-72
Identity = 115/127 (90.55%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHG--STLQSSPRTTNSRRITTIPLSFRTSYRF 60
           MASLLSL+ISSSFPSPL PHRTF+SIS HG  S   SSPRTTNSRRITTI  SFRTSYRF
Sbjct: 1   MASLLSLHISSSFPSPLLPHRTFNSISRHGHGSIPPSSPRTTNSRRITTISFSFRTSYRF 60

Query: 61  TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLE+LWNEAEDPTRTLIHGILQCAVG
Sbjct: 61  TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLESLWNEAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

[Close]

BLAST of Cucsat.G12654 vs. NCBI nr
Match: XP_038905159.1 (uncharacterized protein LOC120091273 [Benincasa hispida])

HSP 1 Score: 191 bits (484), Expect = 6.06e-58
Identity = 95/125 (76.00%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASL +LY+SSS PSPL PHR+ +SI  H ++L   PRT +S+R TTI LSFRTSY F A
Sbjct: 1   MASLPALYVSSSLPSPLRPHRSLNSIFSHETSLPCPPRTRSSQRRTTISLSFRTSYLFAA 60

Query: 61  DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120
           DHED DE+I  DFGFDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTL HGILQCAVGLH
Sbjct: 61  DHEDEDEQIARDFGFDEAVDLFNQGAYYDCHDVLETLWNGAEDPTRTLFHGILQCAVGLH 120

Query: 121 HLFNR 125
           HLFNR
Sbjct: 121 HLFNR 125

[Close]

BLAST of Cucsat.G12654 vs. NCBI nr
Match: XP_022945654.1 (uncharacterized protein LOC111449825 [Cucurbita moschata] >XP_022945663.1 uncharacterized protein LOC111449825 [Cucurbita moschata])

HSP 1 Score: 176 bits (447), Expect = 2.56e-52
Identity = 93/127 (73.23%), Postives = 100/127 (78.74%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASL SL +SSS PS LPPHR  +S+  HGS+L + PR T  R  TT  LSFRTSYRF  
Sbjct: 1   MASLPSLCVSSSAPSLLPPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60

Query: 61  DHEDGDE--KITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           DHED DE  +I  +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61  DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

[Close]

BLAST of Cucsat.G12654 vs. NCBI nr
Match: XP_022971602.1 (uncharacterized protein LOC111470277 [Cucurbita maxima] >XP_022971603.1 uncharacterized protein LOC111470277 [Cucurbita maxima] >KAG6596201.1 hypothetical protein SDJN03_09381, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 173 bits (438), Expect = 5.87e-51
Identity = 92/127 (72.44%), Postives = 99/127 (77.95%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASL SL +SSS PS L PHR  +S+  HGS+L + PR T  R  TT  LSFRTSYRF  
Sbjct: 1   MASLPSLCVSSSAPSLLRPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60

Query: 61  DHEDGDE--KITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           DHED DE  +I  +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61  DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

[Close]

BLAST of Cucsat.G12654 vs. ExPASy TrEMBL
Match: A0A0A0LC38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815420 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.87e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA
Sbjct: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60

Query: 61  DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120
           DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH
Sbjct: 61  DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120

Query: 121 HLFNR 125
           HLFNR
Sbjct: 121 HLFNR 125

[Close]

BLAST of Cucsat.G12654 vs. ExPASy TrEMBL
Match: A0A5A7UHC0 (Uncharacterized ypuF OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006130 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 3.49e-72
Identity = 115/127 (90.55%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHG--STLQSSPRTTNSRRITTIPLSFRTSYRF 60
           MASLLSL+ISSSFPSPL PHRTF+SIS HG  S   SSPRTTNSRRITTI  SFRTSYRF
Sbjct: 1   MASLLSLHISSSFPSPLLPHRTFNSISRHGHGSIPPSSPRTTNSRRITTISFSFRTSYRF 60

Query: 61  TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLE+LWNEAEDPTRTLIHGILQCAVG
Sbjct: 61  TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLESLWNEAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

[Close]

BLAST of Cucsat.G12654 vs. ExPASy TrEMBL
Match: A0A1S3B7D9 (uncharacterized protein LOC103486836 OS=Cucumis melo OX=3656 GN=LOC103486836 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 3.49e-72
Identity = 115/127 (90.55%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHG--STLQSSPRTTNSRRITTIPLSFRTSYRF 60
           MASLLSL+ISSSFPSPL PHRTF+SIS HG  S   SSPRTTNSRRITTI  SFRTSYRF
Sbjct: 1   MASLLSLHISSSFPSPLLPHRTFNSISRHGHGSIPPSSPRTTNSRRITTISFSFRTSYRF 60

Query: 61  TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLE+LWNEAEDPTRTLIHGILQCAVG
Sbjct: 61  TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLESLWNEAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

[Close]

BLAST of Cucsat.G12654 vs. ExPASy TrEMBL
Match: A0A6J1G1I9 (uncharacterized protein LOC111449825 OS=Cucurbita moschata OX=3662 GN=LOC111449825 PE=4 SV=1)

HSP 1 Score: 176 bits (447), Expect = 1.24e-52
Identity = 93/127 (73.23%), Postives = 100/127 (78.74%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASL SL +SSS PS LPPHR  +S+  HGS+L + PR T  R  TT  LSFRTSYRF  
Sbjct: 1   MASLPSLCVSSSAPSLLPPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60

Query: 61  DHEDGDE--KITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           DHED DE  +I  +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61  DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

[Close]

BLAST of Cucsat.G12654 vs. ExPASy TrEMBL
Match: A0A6J1I2E8 (uncharacterized protein LOC111470277 OS=Cucurbita maxima OX=3661 GN=LOC111470277 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 2.84e-51
Identity = 92/127 (72.44%), Postives = 99/127 (77.95%), Query Frame = 0


Query: 1   MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
           MASL SL +SSS PS L PHR  +S+  HGS+L + PR T  R  TT  LSFRTSYRF  
Sbjct: 1   MASLPSLCVSSSAPSLLRPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60

Query: 61  DHEDGDE--KITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVG 120
           DHED DE  +I  +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61  DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120

Query: 121 LHHLFNR 125
           LHHLFNR
Sbjct: 121 LHHLFNR 127

The following BLAST results are available for this feature:

BLAST of Cucsat.G12654 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G12654 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136604.1	3.86e-83	100.00	uncharacterized protein LOC101210744 [Cucumis sativus] >KGN59378.1 hypothetical ...	[more]
XP_008443170.1	7.21e-72	90.55	PREDICTED: uncharacterized protein LOC103486836 [Cucumis melo] >KAA0053937.1 Unc...	[more]
XP_038905159.1	6.06e-58	76.00	uncharacterized protein LOC120091273 [Benincasa hispida]	[more]
XP_022945654.1	2.56e-52	73.23	uncharacterized protein LOC111449825 [Cucurbita moschata] >XP_022945663.1 unchar...	[more]
XP_022971602.1	5.87e-51	72.44	uncharacterized protein LOC111470277 [Cucurbita maxima] >XP_022971603.1 uncharac...	[more]

BLAST of Cucsat.G12654 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC38	1.87e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815420 PE=4 SV=1	[more]
A0A5A7UHC0	3.49e-72	90.55	Uncharacterized ypuF OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352...	[more]
A0A1S3B7D9	3.49e-72	90.55	uncharacterized protein LOC103486836 OS=Cucumis melo OX=3656 GN=LOC103486836 PE=...	[more]
A0A6J1G1I9	1.24e-52	73.23	uncharacterized protein LOC111449825 OS=Cucurbita moschata OX=3662 GN=LOC1114498...	[more]
A0A6J1I2E8	2.84e-51	72.44	uncharacterized protein LOC111470277 OS=Cucurbita maxima OX=3661 GN=LOC111470277...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005500	Protein of unknown function DUF309	PFAM	PF03745	DUF309	coord: 75..126 e-value: 7.8E-20 score: 70.4
IPR005500	Protein of unknown function DUF309	PANTHER	PTHR34796	EXPRESSED PROTEIN	coord: 19..125
None	No IPR available	GENE3D	1.10.3450.10		coord: 29..135 e-value: 5.1E-20 score: 73.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..41
IPR023203	TTHA0068-like superfamily	SUPERFAMILY	140663	TTHA0068-like	coord: 69..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12654.T1	Cucsat.G12654.T1	mRNA
Cucsat.G12654.T2	Cucsat.G12654.T2	mRNA
Cucsat.G12654.T3	Cucsat.G12654.T3	mRNA