Cucsat.G12628 (gene) Cucumber (B10) v3

Overview
NameCucsat.G12628
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg1838: 1254978 .. 1256852 (-)
RNA-Seq ExpressionCucsat.G12628
SyntenyCucsat.G12628
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTCAAAATCATCATTCATTAACACCAACGGTTTAATTTCCTTCTTCATTATTTCTAAATCCAACCTTTCCCCAATTTCTCACTCAACATTTTCCCAATTATTTCTCTCTCTCTCTCTCTCTCTAGATCTATGGATTCTTCAATAGGCAATGTCCAGCACGTTCCCAGAAAATCCTCCGATGAGCTTTTGAGGAAATTTGCTGAGGTGGGGTCGGAGTCCGGTGGTGGAAGAAGGTTGTTGACGGTGGTTAAGAGGCGGCGGAAGAGGGTTAATAACGAGGAGTACTGTGATAGCCCCTCCGGTACTGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCTGTGGGGAGAAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGGTAATTCCATATATACATATACATATATATTTATACACACACACTTCCTCTCCTTGTTTGTTTGAACTATTCAATGTGCACTGTTTCATAAGAATTCAGTGTTTATTAGATTGTTAATTTTGTGATGAATTTACCCAATTAAGTTAGCTATTATAAAGAGAAAAATCAAAGATATTTTACACTATTAAAAATTAATTAAACACAATGATTAAAAAGTTTAACCATATATTCATTCTTTTTAAAGTGTACGATTTAAGGGATGAATTTGTAATTTAAATTTTATTATATTTGAAAAAGAAAATTTTATTGTGTTTGAGTGATTATTAGTTTGATGACCTTATTGAATTATAGGTCCTTTTTCTTTTCTTTTATTCAAAACAAAAGCTAGTTGGGGGGTTTCATGGATGGGGTTTCCATTGTGTTTAACATAATATGCCATAACAAACATTTGTCACAATTCATCATTTTGTATCTAATTGAAAATAAAAAGGATTGGTTCTGTATTGAATAATTATAAACATTATTCAAATATAGTCTCATTTTTTATAATCAAAATGAAAAAGAAAAAAAAATAAAAGTATTCGAGTTAGGTAATATTTAAACATAATTACTATAATTATAAAATTGTATAGCAATGTATATGGTGATGATTTCCCCCTACCAGGTGGCATTATTGTCACTTTCATTAATGTTATTTCTTTCCCCTAAGTTTCCATAACCATGACCTCTCTACTATACCCTTTCACTCAACTTTAATTCCCACCCATTTCCATTTTAAATATCATTTCCAAATTTCAAATCATTATATTCGTATTAACAAAAAAAAAAAAAGTGTTTTCAACCCATTTGTTTTTCTTCTAAAACTCTCTCAACTAACAAATTCATTTATAATAATATAAGCTATACTGAATATGATATAGTATAGTTTGTGCTTATGTTGATTAATTTTCCATGATCTTACCTTAAAACATTGAGTAGCACTTAGTTAATTTGATAGTTGAATGATTTAGTTTGGTATTGTATGATGTAGACATGGCGAAGAACAGTGGAAGGAGCATCAAAGGTTTTGTTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTAATTAATTTCTCTTCTTTTTCTCCATTTTTCTCTCCTTATCTACTTAATTATATTTGTTTCTAATCTTTTCTGTTTAGGAAGCTCTGATTATTTTGTTTAATCTTCATGGAAAAAATAAATTATATGTTTAATCTTCTATACAAATCCATAACACACATGTAATGTAACCCCCTACTTGTTCAATTAACCTCTTATTTCCATGAATCAATCTATTGTTTTTCCAGATTCTCTCACAATCATCTATCTATCTATCTATATAATGCATATAAGATTTGGATAAAATCAAATAGACTTGAGGTGA

Coding sequence (CDS)

ATGGATTCTTCAATAGGCAATGTCCAGCACGTTCCCAGAAAATCCTCCGATGAGCTTTTGAGGAAATTTGCTGAGGTGGGGTCGGAGTCCGGTGGTGGAAGAAGGTTGTTGACGGTGGTTAAGAGGCGGCGGAAGAGGGTTAATAACGAGGAGTACTGTGATAGCCCCTCCGGTACTGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCTGTGGGGAGAAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGACATGGCGAAGAACAGTGGAAGGAGCATCAAAGGTTTTGTTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTAA

Protein sequence

MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTGGVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Homology
[Close]
BLAST of Cucsat.G12628 vs. NCBI nr
Match: XP_004136571.1 (uncharacterized protein LOC101222384 [Cucumis sativus] >KGN59301.1 hypothetical protein Csa_001466 [Cucumis sativus])

HSP 1 Score: 271 bits (694), Expect = 9.40e-92
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 137
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 137

[Close]
BLAST of Cucsat.G12628 vs. NCBI nr
Match: XP_008443054.1 (PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo] >KAA0043733.1 uncharacterized protein E6C27_scaffold236G00620 [Cucumis melo var. makuwa] >TYK25399.1 uncharacterized protein E5676_scaffold352G005410 [Cucumis melo var. makuwa])

HSP 1 Score: 257 bits (657), Expect = 3.87e-86
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE CDSPSG G
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE-CDSPSG-G 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 137
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 135

[Close]
BLAST of Cucsat.G12628 vs. NCBI nr
Match: XP_038905728.1 (uncharacterized protein LOC120091691 [Benincasa hispida])

HSP 1 Score: 245 bits (626), Expect = 2.07e-81
Identity = 128/137 (93.43%), Postives = 129/137 (94.16%), Query Frame = 0 

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSI NVQHVPRKSSDELLRKFAEVGSES GGRRL TVVKRRRKRVN E  C+SPS  G
Sbjct: 1   MDSSIANVQHVPRKSSDELLRKFAEVGSESDGGRRLSTVVKRRRKRVNEE--CESPSSGG 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 137
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 135

[Close]
BLAST of Cucsat.G12628 vs. NCBI nr
Match: XP_022983155.1 (uncharacterized protein LOC111481793 [Cucurbita maxima] >KAG7017556.1 hypothetical protein SDJN02_19422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221 bits (562), Expect = 1.39e-71
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MDSSI----GNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSP 60
           MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R N E  C+SP
Sbjct: 1   MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEE--CESP 60

Query: 61  SGTGGVVERKWLISPVGRKSVVLKKVGIGNG--RSQQLRIRDFRNKSILGAIQKTWRRTV 120
           SG GGVVERKWLI P GRKSVVLKK+GIG+G  RSQQLRIRDFRNKS LGAIQKTWRRTV
Sbjct: 61  SG-GGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLGAIQKTWRRTV 120

Query: 121 EGASKVLLEKHYNTHRRLISDIV 137
           EGASKVLLEKHYNTHRRLISDIV
Sbjct: 121 EGASKVLLEKHYNTHRRLISDIV 140

[Close]
BLAST of Cucsat.G12628 vs. NCBI nr
Match: XP_022935142.1 (uncharacterized protein LOC111442101 [Cucurbita moschata])

HSP 1 Score: 221 bits (562), Expect = 1.39e-71
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MDSSI----GNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSP 60
           MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R N E  C+SP
Sbjct: 1   MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRSNEE--CESP 60

Query: 61  SGTGGVVERKWLISPVGRKSVVLKKVGIGNG--RSQQLRIRDFRNKSILGAIQKTWRRTV 120
           SG GGVVERKWLI P GRKSVVLKK+GIG+G  RSQQLRIRDFRNKS LGAIQKTWRRTV
Sbjct: 61  SG-GGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLGAIQKTWRRTV 120

Query: 121 EGASKVLLEKHYNTHRRLISDIV 137
           EGASKVLLEKHYNTHRRLISDIV
Sbjct: 121 EGASKVLLEKHYNTHRRLISDIV 140

[Close]
BLAST of Cucsat.G12628 vs. ExPASy TrEMBL
Match: A0A0A0LGY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807310 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 4.55e-92
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 137
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 137

[Close]
BLAST of Cucsat.G12628 vs. ExPASy TrEMBL
Match: A0A5A7TJU8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005410 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.87e-86
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE CDSPSG G
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE-CDSPSG-G 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 137
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 135

[Close]
BLAST of Cucsat.G12628 vs. ExPASy TrEMBL
Match: A0A1S3B7W3 (uncharacterized protein LOC103486764 OS=Cucumis melo OX=3656 GN=LOC103486764 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.87e-86
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE CDSPSG G
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE-CDSPSG-G 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 137
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 135

[Close]
BLAST of Cucsat.G12628 vs. ExPASy TrEMBL
Match: A0A6J1J4Z4 (uncharacterized protein LOC111481793 OS=Cucurbita maxima OX=3661 GN=LOC111481793 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 6.75e-72
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MDSSI----GNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSP 60
           MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R N E  C+SP
Sbjct: 1   MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEE--CESP 60

Query: 61  SGTGGVVERKWLISPVGRKSVVLKKVGIGNG--RSQQLRIRDFRNKSILGAIQKTWRRTV 120
           SG GGVVERKWLI P GRKSVVLKK+GIG+G  RSQQLRIRDFRNKS LGAIQKTWRRTV
Sbjct: 61  SG-GGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLGAIQKTWRRTV 120

Query: 121 EGASKVLLEKHYNTHRRLISDIV 137
           EGASKVLLEKHYNTHRRLISDIV
Sbjct: 121 EGASKVLLEKHYNTHRRLISDIV 140

[Close]
BLAST of Cucsat.G12628 vs. ExPASy TrEMBL
Match: A0A6J1F4R1 (uncharacterized protein LOC111442101 OS=Cucurbita moschata OX=3662 GN=LOC111442101 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 6.75e-72
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MDSSI----GNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSP 60
           MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R N E  C+SP
Sbjct: 1   MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRSNEE--CESP 60

Query: 61  SGTGGVVERKWLISPVGRKSVVLKKVGIGNG--RSQQLRIRDFRNKSILGAIQKTWRRTV 120
           SG GGVVERKWLI P GRKSVVLKK+GIG+G  RSQQLRIRDFRNKS LGAIQKTWRRTV
Sbjct: 61  SG-GGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLGAIQKTWRRTV 120

Query: 121 EGASKVLLEKHYNTHRRLISDIV 137
           EGASKVLLEKHYNTHRRLISDIV
Sbjct: 121 EGASKVLLEKHYNTHRRLISDIV 140

The following BLAST results are available for this feature:
BLAST of Cucsat.G12628 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G12628 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136571.19.40e-92100.00uncharacterized protein LOC101222384 [Cucumis sativus] >KGN59301.1 hypothetical ... [more]
XP_008443054.13.87e-8698.54PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo] >KAA0043733.1 unc... [more]
XP_038905728.12.07e-8193.43uncharacterized protein LOC120091691 [Benincasa hispida][more]
XP_022983155.11.39e-7183.92uncharacterized protein LOC111481793 [Cucurbita maxima] >KAG7017556.1 hypothetic... [more]
XP_022935142.11.39e-7183.92uncharacterized protein LOC111442101 [Cucurbita moschata][more]
BLAST of Cucsat.G12628 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGY24.55e-92100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807310 PE=4 SV=1[more]
A0A5A7TJU81.87e-8698.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B7W31.87e-8698.54uncharacterized protein LOC103486764 OS=Cucumis melo OX=3656 GN=LOC103486764 PE=... [more]
A0A6J1J4Z46.75e-7283.92uncharacterized protein LOC111481793 OS=Cucurbita maxima OX=3661 GN=LOC111481793... [more]
A0A6J1F4R16.75e-7283.92uncharacterized protein LOC111442101 OS=Cucurbita moschata OX=3662 GN=LOC1114421... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36355EXPRESSED PROTEINcoord: 3..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G12628.T1Cucsat.G12628.T1mRNA