Cucsat.G1258 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGTGTGTGAGTGAGAGTTTAGAAAATATGACGGTTAACAGCTTGAAGAAGAGATGGAAATCTGAAAATTTTATTGCAATTTTCTTCTTCTTCTTCTTCATTTCTTCTCTTTCTCTAGTGATCCCATTCAGTTCCATGGCGGAATTACTCTGTTTCAATCTACTCTTTCTCTTCACATTATCCATCTCCTTCCTTCTCCAGCGAGCTTCAGCCTCCTATGCAGGTTCCGCTAGCTCAATCGTCAACCCTGCAAAAGTCAAACAGATTTCATGGTCTCCTCGGTACTTCAATTTCTCCCTCTTCTTCTTCTTCTTCTACTACTACTACAACTACTACTACTACTTTCTAAGCTTTCATGATCGATTAGATTTGTTCACGGAACCCTGTTCCCGTTTCAATTTGAATGATTCTTCAGGGCTTTTGTGTATGAAGGTTTTCTCACGGATTTAGAATGCGATCATCTCATTTCCCTCGTGAGTAGAATTAGAATCGATTCGTTTTGCTTTTTTCGATATGCGGTTTTTTTTTTTTTTTTTTCTTTTTGGTTGATTTTGGTTTTGTTTGAATTAGGCTAAAGCGGAGCTGAAGAGATCTTCTGTTGCGGATAATTTGTCCGGAAAGAGCAAAGTCAGCGAGGTTCGAACTAGCTCTGGGGCGTTTATTCATAAAGCCAAGGTTTGTTTAAACTTTAGAGTTTGCTACTTTTAGTTCTTAAGTTTCCAGTAAGAGAACCATTGTGGCTTTATATATCATCTTTTAGTTTGAATCACAACAAACCTAAATCTTAAACTCTCGAGCTTGAAATGTATTGGTTGCATAACCATTGAGATTTCCTCATGGGTTTAAAGATCAGTTTGGTTCATGTTCATGAGATCCATCTTTTGAATATTGGTCTGCTTTATGAAATATATTTTCAAATGAAATGAGTGATGAGCAAGTATGACATTGCAGTAATTTGATCTCCTGATCTTTCATTCTATGATACTGGTATAAATCACCATCTGTGAGAAGCAAAAGAAAACAAAAAGGTTTAAACAGTTGGGTTGAAGCAACTTTCATCAATTAATCTATGCATCAATCTGTATTGATTTGAAAGGGACAGCTGTTATTATTGCTTCATTCTGTATTAATTTGTATTATCGGTATCTTGAATGACAAATTTTTTAAGGATGTGTTTAGCAGCCTGAGCTGATTGAAATTTCAGATTTTCCTGTCCTAGTTGGCTTTGTAGACGGAAAACATTAATGCTATCCTTGATCTTTCTGAGTATAGAGATAGGGAGCCAATTTTACTTTTAAACACCTATCCTGATGAGACACTCTCTTACTCCTTCTGTGGAAACTTATTGTTGTACATCTGTTGTAGGATCCTATTGTTTCTGGTATAGAAGACAAAATTGCAGCATGGACATTTCTGCCAAAAGGTATAATACCTCTAGTGGAAGCACGCAAATTTCTTGTCAAATCCCATAATCTTTAGCAATTTATCCTAGATTGCGAACTTCTTTCCTTTATCTTAAAATAAAGATTAAATTGACTGAAAATTGAGTGTTTACTTAAGATCTTTCTTATGACAACTATGGATGTTAACAGGATCTAGGCTTATGCAGTTGAATTCTGAATTTTGGGTTCTGAAGTTCTATCTATTCTCATGACTGAAACCATCAAGAGAAATCTTGCGCTAATTATTTTGAACTGCAATATGGAAAAAATAAATAGATAACGAAACGTTGTGTATCAGATAAGTTCTAATTCTCATTTTTCCCATGTGATTGAATGATTCTATCCGCAGGATTTTATTCCAAATTCCATATAAATTAGTGAACTTAGGAAGACATGATCCCCCGTCATAACTGTGAAATGCATAATCATCAATAGAGTCTGAGGAATAATTTTGCTGCTGGGAAGAAGCAGAGTTTGGACTAAGCCCTTCTCTTTTTTCTTTTTAGTGAGAAAAGAAAACTGTAAATATGAAACTCTATTTTTGTAAGATGTGAAGCATTTGACTCATGCATTAATAGATTGTTTGGGTATTTGATATTACTGGTAAAGTGAAACTTGAATGTGCTTGATTTCAGATAATGGCGAAGACATTCAAGTGTTGAGATATGAATATGGACAGAAGTACGATGCACACTTTGATTACTTTGCTGACAAGGTTAACATTGCTCGAGGTGGACATCGAATGGCAACCGTTCTCATGTATCTTTCTGATGTAGAAAAAGGCGGTGAAACTGTGTTTCCTTCTGCGGAGGTCCGTCCTTGTATTCCCCTTCAATCCAATTAATTGCAACTTCTTTTTTCTTTTTTAGCCTGAACCGTGACCATAATCAAGTGCCTTGGTTTTCTTAGTTCAATATTCTTTGCAGGAAGATATATCTGTCTATACTTCGAATTGGAAAATTTTCCTGTCTTGGCAATTATATCTGCTGTCATTACTCATTTATTGATGACTTTTTATTCAATATTTGATGTTTTTGTTCATTCATGTGAGTTCAGGAATCTCAAAGACGCCAGGCTTCCGAAACAAACGAAGATCTTTCAGATTGTGCAAAGAAAGGCATAGCAGGTGAGTGTTTTAAGTAGTAGTAGAAATCAATTTGCTAACTTCCGTCCTATTCGTAACATTCATCCAAACTTGTCGAGATTTCTCTCTTTAACCTCCATGTTCAAAATATTCAGTAAAACCCCGGAAAGGCGACGCTCTTCTCTTCTTCAGCCTCCATCCAAATGCTATTCCAGACACAAGTAGTCTACATGGTGGGTGCCCTGTGATTGAAGGTGAGAAATGGTCAGCAACAAAGTGGATTCGTGTCGATTCCTTCGACATGGTCGTGAGAGACCATACAAATTGCGGTGATGAAAATCCAAGTTGTGAGAGATGGGCTGAACTCGGCGAGTGCACGAATAACCCGGAGTATATGGTGGGATCTCCTGAGCTTCCTGGCTACTGCCGGAAAAGTTGTAAGGCATGTTCATAAACTTGGTTCATTCTTTATAATGAGCATTCCCTTGCCTTTTCTTTTTTGTACCAAAAACAGAAATGTTAGTTTTTCGAGAGCATTTTCGTTGAAATGTTTTGTGAGAGTTAGCATTTGTATTGATTACTCAATCATGTAACATTATTTGAACAATAATGTAGTTTGCAAAGTTCTTTTGGTTTTTATGGATAGTCCAATTATAACTCAGTTTAAAAATCTATTTGGATCGATAAGTGCTTACATATACGTATATGTGTAGACTTTAGAAGTTGTAAAAGTTAAATGTCGAAGAAGAAATTGAAAAAGAGAGAATCTGTTTTGAAGAAAGAAACAAAAATGGAGAATTTTGGGGAGAAATTGACAAAACTAACCTATTTTGTTCTATTTTGTTTTATATTTGAAGAGTAACGCAGTTTTAGTAAACTCGTAATTTTGTTTTTTAGTGTCGATCTTGAGAAGATTGACCTCGAGATTCTTCCCAAATTTTAAGAACTCCTCGAAGGAAATTTCTCAGTCTCTTGATTGAGTGCGTCACAAAGATAGTGTATTTTTATTAAAAATTTGAAGTTTATTAAACACTTCTTTAGCAAAGATAGTGTATATTTTATTAAAAATTTAAAGTTTATTAAACACTTCTTGGGCTAAAGTTGCCCCAAGATGACCCTAAGCTAATTAAGAACATAAGCACGAAATGATCTCGAGGTAAAGAACATAAGCATGATGTAATATAATTTTGGGTTAAGGTTACTTCGAGATGTACCTGAATTTAAAAAAACAGAAGCTAAAATAGA AAGTGTGTGAGTGAGAGTTTAGAAAATATGACGGTTAACAGCTTGAAGAAGAGATGGAAATCTGAAAATTTTATTGCAATTTTCTTCTTCTTCTTCTTCATTTCTTCTCTTTCTCTAGTGATCCCATTCAGTTCCATGGCGGAATTACTCTGTTTCAATCTACTCTTTCTCTTCACATTATCCATCTCCTTCCTTCTCCAGCGAGCTTCAGCCTCCTATGCAGGTTCCGCTAGCTCAATCGTCAACCCTGCAAAAGTCAAACAGATTTCATGGTCTCCTCGGGCTTTTGTGTATGAAGGTTTTCTCACGGATTTAGAATGCGATCATCTCATTTCCCTCGCTAAAGCGGAGCTGAAGAGATCTTCTGTTGCGGATAATTTGTCCGGAAAGAGCAAAGTCAGCGAGGTTCGAACTAGCTCTGGGGCGTTTATTCATAAAGCCAAGGATCCTATTGTTTCTGGTATAGAAGACAAAATTGCAGCATGGACATTTCTGCCAAAAGATAATGGCGAAGACATTCAAGTGTTGAGATATGAATATGGACAGAAGTACGATGCACACTTTGATTACTTTGCTGACAAGGTTAACATTGCTCGAGGTGGACATCGAATGGCAACCGTTCTCATGTATCTTTCTGATGTAGAAAAAGGCGGTGAAACTGTGTTTCCTTCTGCGGAGGAATCTCAAAGACGCCAGGCTTCCGAAACAAACGAAGATCTTTCAGATTGTGCAAAGAAAGGCATAGCAGTAAAACCCCGGAAAGGCGACGCTCTTCTCTTCTTCAGCCTCCATCCAAATGCTATTCCAGACACAAGTAGTCTACATGGTGGGTGCCCTGTGATTGAAGGTGAGAAATGGTCAGCAACAAAGTGGATTCGTGTCGATTCCTTCGACATGGTCGTGAGAGACCATACAAATTGCGGTGATGAAAATCCAAGTTGTGAGAGATGGGCTGAACTCGGCGAGTGCACGAATAACCCGGAGTATATGGTGGGATCTCCTGAGCTTCCTGGCTACTGCCGGAAAAGTTGTAAGGCATGTTCATAA KCVSESLENMTVNSLKKRWKSENFIAIFFFFFFISSLSLVIPFSSMAELLCFNLLFLFTLSISFLLQRASASYAGSASSIVNPAKVKQISWSPRAFVYEGFLTDLECDHLISLAKAELKRSSVADNLSGKSKVSEVRTSSGAFIHKAKDPIVSGIEDKIAAWTFLPKDNGEDIQVLRYEYGQKYDAHFDYFADKVNIARGGHRMATVLMYLSDVEKGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAIPDTSSLHGGCPVIEGEKWSATKWIRVDSFDMVVRDHTNCGDENPSCERWAELGECTNNPEYMVGSPELPGYCRKSCKACS Homology
BLAST of Cucsat.G1258 vs. ExPASy Swiss-Prot
Match: Q8LAN3 (Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana OX=3702 GN=P4H4 PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.4e-68 Identity = 132/174 (75.86%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy Swiss-Prot
Match: F4JAU3 (Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=P4H2 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.7e-66 Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy Swiss-Prot
Match: Q8L970 (Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana OX=3702 GN=P4H7 PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52 Identity = 110/187 (58.82%), Postives = 138/187 (73.80%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy Swiss-Prot
Match: F4J0A8 (Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana OX=3702 GN=P4H6 PE=2 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 9.3e-49 Identity = 100/170 (58.82%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy Swiss-Prot
Match: Q9LN20 (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43 Identity = 82/139 (58.99%), Postives = 107/139 (76.98%), Query Frame = 0
BLAST of Cucsat.G1258 vs. NCBI nr
Match: XP_004134175.2 (probable prolyl 4-hydroxylase 4 [Cucumis sativus] >KGN57053.1 hypothetical protein Csa_010114 [Cucumis sativus]) HSP 1 Score: 385 bits (988), Expect = 3.68e-132 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Cucsat.G1258 vs. NCBI nr
Match: XP_008438765.1 (PREDICTED: probable prolyl 4-hydroxylase 4 [Cucumis melo]) HSP 1 Score: 338 bits (868), Expect = 1.90e-114 Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Cucsat.G1258 vs. NCBI nr
Match: XP_038903083.1 (probable prolyl 4-hydroxylase 4 [Benincasa hispida]) HSP 1 Score: 333 bits (855), Expect = 1.80e-112 Identity = 170/181 (93.92%), Postives = 177/181 (97.79%), Query Frame = 0
BLAST of Cucsat.G1258 vs. NCBI nr
Match: KAA0049426.1 (putative prolyl 4-hydroxylase 4 [Cucumis melo var. makuwa] >TYK16104.1 putative prolyl 4-hydroxylase 4 [Cucumis melo var. makuwa]) HSP 1 Score: 327 bits (837), Expect = 8.88e-110 Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0
BLAST of Cucsat.G1258 vs. NCBI nr
Match: XP_022137761.1 (probable prolyl 4-hydroxylase 4 [Momordica charantia]) HSP 1 Score: 321 bits (822), Expect = 1.81e-107 Identity = 163/181 (90.06%), Postives = 174/181 (96.13%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy TrEMBL
Match: A0A0A0L5Q6 (Procollagen-proline 4-dioxygenase OS=Cucumis sativus OX=3659 GN=Csa_3G150820 PE=3 SV=1) HSP 1 Score: 385 bits (988), Expect = 1.78e-132 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy TrEMBL
Match: A0A1S3AWU7 (Procollagen-proline 4-dioxygenase OS=Cucumis melo OX=3656 GN=LOC103483779 PE=3 SV=1) HSP 1 Score: 338 bits (868), Expect = 9.22e-115 Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy TrEMBL
Match: A0A5A7U593 (Procollagen-proline 4-dioxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00280 PE=3 SV=1) HSP 1 Score: 327 bits (837), Expect = 4.30e-110 Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy TrEMBL
Match: A0A6J1C7M6 (Procollagen-proline 4-dioxygenase OS=Momordica charantia OX=3673 GN=LOC111009125 PE=3 SV=1) HSP 1 Score: 321 bits (822), Expect = 8.76e-108 Identity = 163/181 (90.06%), Postives = 174/181 (96.13%), Query Frame = 0
BLAST of Cucsat.G1258 vs. ExPASy TrEMBL
Match: A0A6J1I971 (Procollagen-proline 4-dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111472232 PE=3 SV=1) HSP 1 Score: 318 bits (816), Expect = 7.15e-107 Identity = 162/181 (89.50%), Postives = 174/181 (96.13%), Query Frame = 0
BLAST of Cucsat.G1258 vs. TAIR 10
Match: AT5G18900.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 260.0 bits (663), Expect = 1.7e-69 Identity = 132/174 (75.86%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of Cucsat.G1258 vs. TAIR 10
Match: AT3G06300.1 (P4H isoform 2 ) HSP 1 Score: 253.8 bits (647), Expect = 1.2e-67 Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 0
BLAST of Cucsat.G1258 vs. TAIR 10
Match: AT3G28480.1 (Oxoglutarate/iron-dependent oxygenase ) HSP 1 Score: 208.0 bits (528), Expect = 7.5e-54 Identity = 110/187 (58.82%), Postives = 138/187 (73.80%), Query Frame = 0
BLAST of Cucsat.G1258 vs. TAIR 10
Match: AT3G28490.1 (Oxoglutarate/iron-dependent oxygenase ) HSP 1 Score: 194.9 bits (494), Expect = 6.6e-50 Identity = 100/170 (58.82%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of Cucsat.G1258 vs. TAIR 10
Match: AT3G28480.2 (Oxoglutarate/iron-dependent oxygenase ) HSP 1 Score: 186.0 bits (471), Expect = 3.1e-47 Identity = 106/195 (54.36%), Postives = 133/195 (68.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|