Cucsat.G12511 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12511
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DEAD-box ATP-dependent RNA helicase 38
Location	ctg1837: 3393670 .. 3397778 (+)
RNA-Seq Expression	Cucsat.G12511
Synteny	Cucsat.G12511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTACAACCCAATTAATTTTAATAAAAATCTAAATTTAATAAATAAAATATATTTGTTGTTTCCTCACCCCCCCAAAATATATATATATATAAACCATACCCTTTTTTCTTTTTCTTCCCTCCTAAGTTCTACCGTTCTCTGTTTCGCCCTCTCCAACACCCGCGTCAAGCTTACTATTTGATTCTTCACCTTCCCCATTGTGTACCAGCGATGGTAGATGATGCGGCTCCAGGTTCTACCACCAATGACTCGTACTGTGACGCCACCATCACTCATTCCCCGACTACTGCCCCATTCGTAGTTTCACCATTGCCAAAACGAGGTTGGGGCGATGAAGAACACCATGATGTGGTTGCTGATACTGGAGATTTATCCTCTGTGCCGTCCGAGGTCATGGAATCCCTTAAAATTGAAGACGAAACAACGCTTGAAGAACCCATAGACTCTAACATCACAGCTGTAAGTCTCTCACGTACTCCATCAAATGTGTTTAAATGGCGTCTAGGAATCAAGGACATAGGAAAAAGGCAATGAAATATGAATTTGAGGCGGAATCTTGTCATATTTTAATTGATGAAACTTGTAGGGTTTAAGCGAGGATTAAGGATAGGATTTGGTTCTTTGTGTATCGGAATTAACATGATTGAAATTTCCGACCTGCATAGATATAAAAGAACTGTTTTTAGATCGTTGACAACCGGTGAAATTGTTTTGAGGTTTTAGTTTGTGTGCTCGGTTGTATAGCAATGCGGGGTTTCTTGTTATGCTTTTCGGTTAATTTATTTTTTATTTGATGTAGGTGACAACTGGTGATACTCCATATTCATCGGCTAGTACTTTTGAGGATTTGAATCTGTCTAAGGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAAGTTTGCCTATGATCCTGACTCCTCCTTACAAACATTTAATTGCTCAAGCACACAATGGTTCTGGAAAGACTACATGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTAAAGGCTCCTCAGGCATTTTGCATATGTCCTACAAGGGAGTTAGCAATGCAAGTAAGAAGCTCTCTTTTATGTTTAAATGAATGCCATTGGCTTCTATCTATGTTAGATCTTAATTCTTCTTGAATATTATTATTGTAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACCGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCAAACTATATGCCAGTATCAAAGCGGCCACCCACAACTGCACAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCAGGGAGGAAGTTGGGAGTAAGTTGCGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGTAAGTTACTATGTATAGACTGGACATATTGTAGCATCTGTGTCCATGGGAAGCAGTATCTTCTCTTGATCTGTTATTCAAGATCATAGTTTTGTAATGTATATTTTTGTATCATTAATGATCCGTTAAATGTATTAGTTATTTTGAGTTATTGTGAGGGTGGACAATGGTAGTTATTTTTTCTTTGTCTTTTGTTTTTATTCAGGATGGCTTTCAGGATGATTCATTGAGAATCATGAGGGACATTGAGAGAAGTAGCTCTCATTTCCAGGTTTGTCTATATTATCACATAACCATTTCTAATCATAGTAATCTCATTTTTCCTTTTCTTATTGTTAAAAACTTTGTTTCAGGTGCTTCTGTTCTCTGCTACATTCGATGAGAATGTTAAAAACTTTGTCTCTAGGGTGGTTAAAGACTACAACCAACTGTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATTCAAGTTGATATGTCCAAATGAACAAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTAGCAGACAAATTGGGTCAAACAATTATATTTGTGGGCACAAGAAAGAGTGCTGGAGTGTTACACAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATCAAAGGGGCAATGACCAATGACATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACAAAAGTTCTTATTTCAACTGACCTTCTAGCTCGAGGCTTTGATCAGCAGCAAGTACGAATATCAGTTCTCCATCCACTCCTCTGTTTGCTGTGATAGTATATAACGTGATGCCTTTTCAGATCTCTAATATATGTTTATTTTAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAACACGATCCTTCTTCACAAGCAATGAAATACAGATCTTCCTCATCATCAGAGCCTAACTTCGAGGTGTACCTCCATCGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGTAAGTTTCCGTTGCTATTGTACTTTCATATCTATGTTTCTAAATTCTTCCAGCCCTAAACCCTGGATATGCCTCCATGTTTCTAGATTGTTGATGCTAAGCAACTTTACAAGGGTTAGAAGCAATCTTTTAAACTGGCTTCTTGGTTGTCCCGGACACTCATGGATATAAAAAATTATTTATATAGATTGCGTCCATCACTTTTTTCTTGATTTGCAAACGCTTTTTGTAGTATCATTTGCAATGAAGAGTTGCTAAACATACAATCTTTTGGGTATATTGTTAAATGAAAGCTCATGACTGTTGTGTGATCACTACAGGAGCTGTGTTTAACTTGCTCTGTGGCGATCAGGAAATCAAGCGAATGGACAAAATTCAGAAGCATTTTGGCTCTGAAGTAATAGAGGTAAGATTCCTTCTTTGGTTGACAACATTTGAATTCCACCCGTTTTCTGACCTATCTGGATATCGAATTTCTATCTCAGTACCTTTTGAAATGTATATTTCAGGTTAGAGACACTGATGAGGACATTGAAGCAGCCTTAAAATCTGCTGGATTGATTTGATGTATAGAAAAGGAGTTTACATAGCTAATTTCCATTGATGCCAACCACACACCAAAAAGGCGATTAAAACCTTGGAACAAGATGGATGCAGAAATGGATTGAAGCAACGCTGCACAGTTTTTGTTTTGCCTTCAACTTAACATTTGGCTTCTGAGGTATATATCGTGAAGAGTCATGCAAGTTTGCTAAATAATTTTTATCGATGAAACCTGTTGGAAAGAATAGCCTTATTTTTCTTTTCAATCTTCAAATGAAACGGAAATCAAGGATCATAGAATCGGTAAAAGCAAGCGTTTTGTAGTGTAGGTTAGCTTACGAGCATTTGATATTTGCAATTAATTAATAAAAGACATCAACTTGAAAAAACTTAGGAGTATTTAATGAAAATCAATGCTAAAATTGTCGAAACTCAAAACCTATTGGGTTTCCATTTTAAATTAAATTAATTGCAAAGAAATGGTTAGTGACAGATTGAAGTAAAAATGTAGAGGGTGAATCAAAACAAATAAAAATGGTCTGTGACAAAACTTAAATGAGAAAAAAGAATTTGTTCCAAAGTTTGAGACCAAGTAAATATTTAAACCTCTATTCTTCCCCCTTCAACGTTGCATCTCCTTGCCTTTGACTTTCAAACACATAATCAATGGAGCTCCAATGGTGGAACGCACGTCGCCAAGTAGTGCCTCTCCATTTTCTTCTTCCTTCTCCTTGTCTATATGAACCTCCGCAACCCTGCCCGATCCACACACTGGCTTTTTCAGAAACAAAAAGCTCAAAATGGGACCTTTATTGCGCCTCACAATGGCAGCTTCACTTTTGATCGGCTGCATCAACATTGTAGCAGCCGGCGACGTCATTCATATCGGTGGAAAAGTTCTCTGCCAGGACTGCACTCAGGGCTGGAACGAGTGGATCAACGGAAAGCCTCTCAAAGGTAATACAAATCAATTATTAACGAACAAGTACTTCAAAACTGAAATCGCATTTTCTAATGATGTTTATCGATGCTCTTGACCTCAGATTGTAAAGTATCTGTAACGTGTTTGGATGAGAGAAGTAGAGTGATGCATTACGCGAGCGATCTGACGGACGAATTAGGGCAATTTGATATCACTATCAACAAGTTTATTAACGGAAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTCGTTTCGTCTCCGGATCTTGCGTGCA

Coding sequence (CDS)

ATGGTAGATGATGCGGCTCCAGGTTCTACCACCAATGACTCGTACTGTGACGCCACCATCACTCATTCCCCGACTACTGCCCCATTCGTAGTTTCACCATTGCCAAAACGAGGTTGGGGCGATGAAGAACACCATGATGTGGTTGCTGATACTGGAGATTTATCCTCTGTGCCGTCCGAGGTCATGGAATCCCTTAAAATTGAAGACGAAACAACGCTTGAAGAACCCATAGACTCTAACATCACAGCTGTGACAACTGGTGATACTCCATATTCATCGGCTAGTACTTTTGAGGATTTGAATCTGTCTAAGGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAAGTTTGCCTATGATCCTGACTCCTCCTTACAAACATTTAATTGCTCAAGCACACAATGGTTCTGGAAAGACTACATGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTAAAGGCTCCTCAGGCATTTTGCATATGTCCTACAAGGGAGTTAGCAATGCAAAATATTGAGGTTCTTAAGAAAATGGGAAAATACACCGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCAAACTATATGCCAGTATCAAAGCGGCCACCCACAACTGCACAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCAGGGAGGAAGTTGGGAGTAAGTTGCGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCATTGAGAATCATGAGGGACATTGAGAGAAGTAGCTCTCATTTCCAGGTGCTTCTGTTCTCTGCTACATTCGATGAGAATGTTAAAAACTTTGTCTCTAGGGTGGTTAAAGACTACAACCAACTGTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATTCAAGTTGATATGTCCAAATGAACAAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTAGCAGACAAATTGGGTCAAACAATTATATTTGTGGGCACAAGAAAGAGTGCTGGAGTGTTACACAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATCAAAGGGGCAATGACCAATGACATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACAAAAGTTCTTATTTCAACTGACCTTCTAGCTCGAGGCTTTGATCAGCAGCAAGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAACACGATCCTTCTTCACAAGCAATGAAATACAGATCTTCCTCATCATCAGAGCCTAACTTCGAGGTGTACCTCCATCGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTCTGTGGCGATCAGGAAATCAAGCGAATGGACAAAATTCAGAAGCATTTTGGCTCTGAAGTAATAGAGGTTAGAGACACTGATGAGGACATTGAAGCAGCCTTAAAATCTGCTGGATTGATTTGA

Protein sequence

MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKGAVFNLLCGDQEIKRMDKIQKHFGSEVIEVRDTDEDIEAALKSAGLI

Homology

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BLAST of Cucsat.G12511 vs. ExPASy Swiss-Prot
Match: Q93ZG7 (DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 PE=1 SV=2)

HSP 1 Score: 542.0 bits (1395), Expect = 7.7e-153
Identity = 289/476 (60.71%), Postives = 362/476 (76.05%), Query Frame = 0


Query: 50  VPAMVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSV 109
           VP +V+ ++  +    +  + T    PTT         K+ WGD      V D  D    
Sbjct: 8   VPTVVESSSSSTVEASNSAEKT---EPTT--------EKKKWGD------VEDDDDEEEA 67

Query: 110 PSEVMESLKIEDE----TTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVE 169
            SE + SL I++E    + LEEP DSNI AVT+GDTPY+SAS FEDLNLS EL+KGLYVE
Sbjct: 68  VSE-LNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVE 127

Query: 170 MRFHKPSKIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCIC 229
           M+F KPSKIQAISLPMI+TPP+KHLIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CIC
Sbjct: 128 MKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCIC 187

Query: 230 PTRELAMQNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWM 289
           PTRELA QN+EVL+KMGK+TGIT+E AVP  +      ++  P +A VVIGTPGT+KKWM
Sbjct: 188 PTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWM 247

Query: 290 SGRKLGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKN 349
           + ++LG++ +KILVFDEADHML  DGF+DDSL+IM+DI R + +FQVLLFSATF+E VK+
Sbjct: 248 AFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKD 307

Query: 350 FVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVG 409
           FV+R VKD NQLFVK+E+L+L+SVKQ+K++CP EQ KI VIKD+I EL D +GQTIIFV 
Sbjct: 308 FVARTVKDPNQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGD-IGQTIIFVK 367

Query: 410 TRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQ 469
           T+ SA  +HKAL ++GYDVT++ G +T   RDKI+KEFK+ LT+VLI+TD++ARGFDQQ+
Sbjct: 368 TKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQR 427

Query: 470 VNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKGK-FPLLL 521
           VNLV+NY+LP K++            + EP++EVYLHR+GRAGRFGRKG  F LLL
Sbjct: 428 VNLVVNYNLPTKYE------------TGEPDYEVYLHRVGRAGRFGRKGAVFNLLL 452

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BLAST of Cucsat.G12511 vs. ExPASy Swiss-Prot
Match: Q10RI7 (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0158200 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.2e-134
Identity = 246/390 (63.08%), Postives = 302/390 (77.44%), Query Frame = 0


Query: 125 LEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILT 184
           L++  +S I AVT+G T Y SA+ FEDL L+ ELLKGL+ EM F +PSKIQA++LPMILT
Sbjct: 78  LDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILT 137

Query: 185 PPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKY 244
           PPYK LIAQAHNGSGKTTCFVLGMLSRVD N K  QA CICPTRELA QN  VL +MGK+
Sbjct: 138 PPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKF 197

Query: 245 TGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSCVKILVFDEAD 304
           TGIT  CA+P    +Y+P++K P  T QVVIGT GT+ KW++ +K+  + +KILVFDEAD
Sbjct: 198 TGITCACAIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKWINHKKILTNDIKILVFDEAD 257

Query: 305 HMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEEL 364
           HML EDGF+ DS RIMRDI+RS+   QVLLFSATF+E VK+FV+RV+KD NQ+FVKKEEL
Sbjct: 258 HMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTRVIKDGNQIFVKKEEL 317

Query: 365 SLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDV 424
           +LE VKQ+K+  P+E+ KI VIKD+IFE   K+GQ IIFV T++S   +H AL    Y  
Sbjct: 318 TLEKVKQYKVQVPDERAKIAVIKDKIFEFGQKVGQVIIFVRTKQSTKDVHNALTLEDYVC 377

Query: 425 TTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQA 484
           ++I+G++    R+KII+EFK+G TKVLISTD+LARGFDQ QVNLVINYD+P+K       
Sbjct: 378 SSIQGSLDQSEREKIIQEFKNGYTKVLISTDVLARGFDQAQVNLVINYDMPIKF------ 437

Query: 485 MKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 515
                 +  EP++EVYLHRIGRAGRFGRKG
Sbjct: 438 -----GTRDEPDYEVYLHRIGRAGRFGRKG 456

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BLAST of Cucsat.G12511 vs. ExPASy Swiss-Prot
Match: Q2TBP1 (ATP-dependent RNA helicase DDX25 OS=Bos taurus OX=9913 GN=DDX25 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 8.5e-75
Identity = 162/390 (41.54%), Postives = 243/390 (62.31%), Query Frame = 0


Query: 141 TPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILTPPYKHLIAQAHNGSGK 200
           +P  S  TFE+L L +ELLKG+Y  M F++PSKIQ ++LPM+L  P ++LIAQ+ +G+GK
Sbjct: 91  SPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGK 150

Query: 201 TTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY 260
           T  FVL MLSRV+     PQ  C+ PT ELA+Q   V+++MGK+        + A   N 
Sbjct: 151 TAAFVLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKF--CVDVQVMYAIRGNR 210

Query: 261 MPVSKRPPTTAQVVIGTPGTIKKWMSGRKL-GVSCVKILVFDEADHMLGEDGFQDDSLRI 320
           +P  +    T Q+VIGTPGT+  W   RKL  ++ +++ V DEAD M+   GF+D S+RI
Sbjct: 211 IP--RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRI 270

Query: 321 MRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNE 380
            R +    S  Q+LLFSATF+++V  F  R++ D N + ++KEEL+L +++Q+ ++C N 
Sbjct: 271 QRAL---PSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNR 330

Query: 381 QTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKI 440
           + K + + +    +   +GQ IIF  TR++A  L   ++  G+ V+ + G +T D R  I
Sbjct: 331 KDKYQALCNIYGGIT--IGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASI 390

Query: 441 IKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEV 500
           I+ F+DG  KVLI+T++ ARG D +QV +V+N+DLP+             + + EP++E 
Sbjct: 391 IQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV-------------NQAEEPDYET 450

Query: 501 YLHRIGRAGRFGRKG---------KFPLLL 521
           YLHRIGR GRFG+KG         K PLL+
Sbjct: 451 YLHRIGRTGRFGKKGLAFNMIEVDKLPLLM 457

[Close]

BLAST of Cucsat.G12511 vs. ExPASy Swiss-Prot
Match: Q5AJD0 (ATP-dependent RNA helicase DBP5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP5 PE=3 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-74
Identity = 172/435 (39.54%), Postives = 255/435 (58.62%), Query Frame = 0


Query: 93  DEEHHDVVADTGDLSSVPSEVMESLKIEDETTLE--EPIDSNITA-----VTTGD----- 152
           DE   +V    G       EV E  K E +   E  EP  + I +     V   D     
Sbjct: 83  DESKDEVKDGDGAKEETKEEVKEESKEEPKEPKEPKEPATNLIKSSYEVKVKLADIQADP 142

Query: 153 -TPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILTPPYKHLIAQAHNGSG 212
            +P  S  +FE+L LS ELLKGLY  M+F+KPSKIQ  +LP++L+ P +++I Q+ +G+G
Sbjct: 143 NSPLYSVKSFEELGLSPELLKGLYA-MKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTG 202

Query: 213 KTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN 272
           KT  F L MLSRVD  +K PQ  C+ PTRELA Q +EV+  MGK+T IT++  VP    N
Sbjct: 203 KTAAFSLTMLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVP----N 262

Query: 273 YMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSCVKILVFDEADHMLGEDGFQDDSLRI 332
            +P  +     AQV++GTPG     +  R+L +S +K+ V DEAD+ML   G  D ++R+
Sbjct: 263 AIP--RGSSVNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRV 322

Query: 333 MRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNE 392
            + + R     Q++LFSATF   V+ +  R+V D N L +K+EEL+++ +KQ  + C +E
Sbjct: 323 KKALPRG---VQLVLFSATFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSE 382

Query: 393 QTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKI 452
           Q K  V+ +    L   +G +IIFV  +++A VL+  +   G+ V+ + G + N  RD++
Sbjct: 383 QHKFEVLCELYGLLT--IGSSIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNTDRDRL 442

Query: 453 IKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEV 512
           I +F++G +KVLI+T++LARG D   V++V+NYD+P             +    +P+   
Sbjct: 443 IDDFREGRSKVLITTNVLARGIDIASVSMVVNYDMP-------------TDKYGKPDPST 492

Query: 513 YLHRIGRAGRFGRKG 515
           YLHRIGR GRFGR G
Sbjct: 503 YLHRIGRTGRFGRVG 492

[Close]

BLAST of Cucsat.G12511 vs. ExPASy Swiss-Prot
Match: Q9QY16 (ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus OX=10116 GN=Ddx25 PE=1 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 5.5e-74
Identity = 161/390 (41.28%), Postives = 242/390 (62.05%), Query Frame = 0


Query: 141 TPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILTPPYKHLIAQAHNGSGK 200
           +P  S  TFE+L L +ELLKG+Y  M F++PSKIQ ++LPM+L  P ++LIAQ+ +G+GK
Sbjct: 91  SPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGK 150

Query: 201 TTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY 260
           T  FVL ML+RV+     PQ  C+ PT ELA+Q   V+++MGK+        + A   N 
Sbjct: 151 TAAFVLAMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKF--CVDVEVMYAIRGNR 210

Query: 261 MPVSKRPPTTAQVVIGTPGTIKKWMSGRKL-GVSCVKILVFDEADHMLGEDGFQDDSLRI 320
           +P  +    T Q+VIGTPGT+  W   RKL  ++ +++ V DEAD M+   GF D S+RI
Sbjct: 211 IP--RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRI 270

Query: 321 MRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNE 380
            R +    S  Q+LLFSATF+++V  F  R++ D N + ++KEEL+L +++Q+ ++C N 
Sbjct: 271 QRAL---PSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENR 330

Query: 381 QTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKI 440
           + K + + +    +   +GQ IIF  TR++A  L   ++  G+ V+ + G +T + R  I
Sbjct: 331 KDKYQALCNIYGGIT--IGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASI 390

Query: 441 IKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEV 500
           I+ F+DG  KVLI+T++ ARG D +QV +V+N+DLP+             + S EP++E 
Sbjct: 391 IQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV-------------NQSEEPDYET 450

Query: 501 YLHRIGRAGRFGRKG---------KFPLLL 521
           YLHRIGR GRFG+KG         K PLL+
Sbjct: 451 YLHRIGRTGRFGKKGLAFNMIEVDKLPLLM 457

[Close]

BLAST of Cucsat.G12511 vs. NCBI nr
Match: XP_004137993.3 (DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus] >KAE8651061.1 hypothetical protein Csa_002116 [Cucumis sativus])

HSP 1 Score: 913 bits (2359), Expect = 0.0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0


Query: 53  MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSE 112
           MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSE
Sbjct: 1   MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSE 60

Query: 113 VMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPS 172
           VMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPS
Sbjct: 61  VMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPS 120

Query: 173 KIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 232
           KIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 233 QNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGV 292
           QNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGV 240

Query: 293 SCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVK 352
           SCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVK
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVK 300

Query: 353 DYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGV 412
           DYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGV
Sbjct: 301 DYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGV 360

Query: 413 LHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINY 472
           LHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINY
Sbjct: 361 LHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINY 420

Query: 473 DLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 514
           DLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG
Sbjct: 421 DLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 462

[Close]

BLAST of Cucsat.G12511 vs. NCBI nr
Match: XP_008442767.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo])

HSP 1 Score: 868 bits (2242), Expect = 7.55e-315
Identity = 442/460 (96.09%), Postives = 447/460 (97.17%), Query Frame = 0


Query: 55  DDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVM 114
           DD AP ST+N S CDATITHSP+TAPFVVSP+PKR WG+EE  DVVADTG  SSVPSEVM
Sbjct: 4   DDVAPDSTSNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVM 63

Query: 115 ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 174
           ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI
Sbjct: 64  ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 123

Query: 175 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 234
           QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN
Sbjct: 124 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 183

Query: 235 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSC 294
           IEVLKKMGKYTGITSECAVPADSANYMPVSKRPP TAQVVIGTPGTIKKWMSGRKLGVSC
Sbjct: 184 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSC 243

Query: 295 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDY 354
           VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH QVLLFSATFDENVKNFVSRVVKDY
Sbjct: 244 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSRVVKDY 303

Query: 355 NQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLH 414
           NQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFV TR SAGVLH
Sbjct: 304 NQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVATRNSAGVLH 363

Query: 415 KALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDL 474
           KALVDLGYDVTTI+GAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDL
Sbjct: 364 KALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDL 423

Query: 475 PLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 514
           PLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG
Sbjct: 424 PLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 463

[Close]

BLAST of Cucsat.G12511 vs. NCBI nr
Match: KAA0043945.1 (DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo var. makuwa])

HSP 1 Score: 856 bits (2212), Expect = 7.57e-310
Identity = 443/487 (90.97%), Postives = 448/487 (91.99%), Query Frame = 0


Query: 55  DDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVM 114
           DD AP ST+N S CDATITHSP+TAPFVVSP+PKR WG+EE  DVVADTG  SSVPSEVM
Sbjct: 4   DDVAPDSTSNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVM 63

Query: 115 ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 174
           ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI
Sbjct: 64  ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 123

Query: 175 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 234
           QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN
Sbjct: 124 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 183

Query: 235 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSC 294
           IEVLKKMGKYTGITSECAVPADSANYMPVSKRPP TAQVVIGTPGTIKKWMSGRKLGVSC
Sbjct: 184 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSC 243

Query: 295 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH------------------------- 354
           VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH                         
Sbjct: 244 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVCLYYYITISNHSNLIFPFLIVK 303

Query: 355 --FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 414
             FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK
Sbjct: 304 NLFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 363

Query: 415 DRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGL 474
           DRIFELADKLGQTIIFV TR SAGVLHKALVDLGYDVTTI+GAMTNDIRDKIIKEFKDGL
Sbjct: 364 DRIFELADKLGQTIIFVATRNSAGVLHKALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGL 423

Query: 475 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 514
           TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA
Sbjct: 424 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 483

[Close]

BLAST of Cucsat.G12511 vs. NCBI nr
Match: TYK25195.1 (DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo var. makuwa])

HSP 1 Score: 831 bits (2146), Expect = 7.54e-300
Identity = 434/487 (89.12%), Postives = 440/487 (90.35%), Query Frame = 0


Query: 55  DDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVM 114
           DD AP ST+N S CDATITHSP+TAPFVVSP+PKR WG+EE  DVVADTG  SSVPSEVM
Sbjct: 4   DDVAPDSTSNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVM 63

Query: 115 ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 174
           ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI
Sbjct: 64  ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 123

Query: 175 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 234
           QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQ 
Sbjct: 124 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQ- 183

Query: 235 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSC 294
             V   +  YTGITSECAVPADSANYMPVSKRPP TAQVVIGTPGTIKKWMSGRKLGVSC
Sbjct: 184 --VRTSLLLYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSC 243

Query: 295 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH------------------------- 354
           VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH                         
Sbjct: 244 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVCLYYYITISNHSNLIFPFLIVK 303

Query: 355 --FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 414
             FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK
Sbjct: 304 NLFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 363

Query: 415 DRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGL 474
           DRIFELADKLGQTIIFV TR SAGVLHKALVDLGYDVTTI+GAMTNDIRDKIIKEFKDGL
Sbjct: 364 DRIFELADKLGQTIIFVATRNSAGVLHKALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGL 423

Query: 475 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 514
           TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA
Sbjct: 424 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 483

[Close]

BLAST of Cucsat.G12511 vs. NCBI nr
Match: XP_038906287.1 (DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906288.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906289.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida])

HSP 1 Score: 792 bits (2045), Expect = 8.11e-285
Identity = 410/467 (87.79%), Postives = 431/467 (92.29%), Query Frame = 0


Query: 53  MVDDAAPGSTTNDSYCDA----TITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSS 112
           M D AAP STT+D+   A    T T   ++AP +V+P+PKR WGDEE  DV  DTGD SS
Sbjct: 1   MADHAAPDSTTSDASAPAAATATATDGSSSAPPIVTPVPKRAWGDEEDDDV-GDTGDSSS 60

Query: 113 VPSEVMESLKIED-ETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMR 172
            PSE +ESLKIED ETTL+EPIDSNITAVTTG TPY+SASTFEDLNLSKELLKGLYVEMR
Sbjct: 61  APSEYLESLKIEDDETTLDEPIDSNITAVTTGGTPYTSASTFEDLNLSKELLKGLYVEMR 120

Query: 173 FHKPSKIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPT 232
           FHKPSKIQAISLPMILTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPT
Sbjct: 121 FHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPT 180

Query: 233 RELAMQNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSG 292
           RELAMQNIEVLKKMGKYTGITSECAVPADSANY+P+SKRPP TAQVVIGTPGTIKKWMS 
Sbjct: 181 RELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSS 240

Query: 293 RKLGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFV 352
           RKLGVSCV+ILVFDEADHMLGEDGFQDDSLRIM+DIERSS H QVLLFSATFDENVK FV
Sbjct: 241 RKLGVSCVRILVFDEADHMLGEDGFQDDSLRIMKDIERSSPHCQVLLFSATFDENVKKFV 300

Query: 353 SRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTR 412
           SRVVKDYNQLFVKKEELSLESVKQFKLICP+E TKIRVIKDRIFELADKLGQTIIFV TR
Sbjct: 301 SRVVKDYNQLFVKKEELSLESVKQFKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTR 360

Query: 413 KSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVN 472
            SAG+LHKALVDLGYDVTTI+GA+TNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVN
Sbjct: 361 NSAGMLHKALVDLGYDVTTIQGALTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVN 420

Query: 473 LVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 514
           LVINYDLPLKH+PS QA KYRSSSSS+PN+EVYLHRIGRAGRFGRKG
Sbjct: 421 LVINYDLPLKHEPSLQATKYRSSSSSDPNYEVYLHRIGRAGRFGRKG 466

[Close]

BLAST of Cucsat.G12511 vs. ExPASy TrEMBL
Match: A0A0A0LDT3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746560 PE=4 SV=1)

HSP 1 Score: 909 bits (2350), Expect = 0.0
Identity = 461/462 (99.78%), Postives = 461/462 (99.78%), Query Frame = 0


Query: 53  MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSE 112
           MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSE
Sbjct: 1   MVDDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSE 60

Query: 113 VMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPS 172
           VMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPS
Sbjct: 61  VMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPS 120

Query: 173 KIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 232
           KIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 233 QNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGV 292
           QNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGV 240

Query: 293 SCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVK 352
           SCVKILVFDEADHMLGEDGFQD SLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVK
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDYSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVK 300

Query: 353 DYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGV 412
           DYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGV
Sbjct: 301 DYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGV 360

Query: 413 LHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINY 472
           LHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINY
Sbjct: 361 LHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINY 420

Query: 473 DLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 514
           DLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG
Sbjct: 421 DLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 462

[Close]

BLAST of Cucsat.G12511 vs. ExPASy TrEMBL
Match: A0A1S3B601 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo OX=3656 GN=LOC103486545 PE=4 SV=1)

HSP 1 Score: 868 bits (2242), Expect = 3.65e-315
Identity = 442/460 (96.09%), Postives = 447/460 (97.17%), Query Frame = 0


Query: 55  DDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVM 114
           DD AP ST+N S CDATITHSP+TAPFVVSP+PKR WG+EE  DVVADTG  SSVPSEVM
Sbjct: 4   DDVAPDSTSNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVM 63

Query: 115 ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 174
           ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI
Sbjct: 64  ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 123

Query: 175 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 234
           QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN
Sbjct: 124 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 183

Query: 235 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSC 294
           IEVLKKMGKYTGITSECAVPADSANYMPVSKRPP TAQVVIGTPGTIKKWMSGRKLGVSC
Sbjct: 184 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSC 243

Query: 295 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVVKDY 354
           VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH QVLLFSATFDENVKNFVSRVVKDY
Sbjct: 244 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSRVVKDY 303

Query: 355 NQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAGVLH 414
           NQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFV TR SAGVLH
Sbjct: 304 NQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVATRNSAGVLH 363

Query: 415 KALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDL 474
           KALVDLGYDVTTI+GAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDL
Sbjct: 364 KALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDL 423

Query: 475 PLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 514
           PLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG
Sbjct: 424 PLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKG 463

[Close]

BLAST of Cucsat.G12511 vs. ExPASy TrEMBL
Match: A0A5A7TRB4 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002860 PE=4 SV=1)

HSP 1 Score: 856 bits (2212), Expect = 3.67e-310
Identity = 443/487 (90.97%), Postives = 448/487 (91.99%), Query Frame = 0


Query: 55  DDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVM 114
           DD AP ST+N S CDATITHSP+TAPFVVSP+PKR WG+EE  DVVADTG  SSVPSEVM
Sbjct: 4   DDVAPDSTSNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVM 63

Query: 115 ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 174
           ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI
Sbjct: 64  ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 123

Query: 175 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 234
           QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN
Sbjct: 124 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 183

Query: 235 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSC 294
           IEVLKKMGKYTGITSECAVPADSANYMPVSKRPP TAQVVIGTPGTIKKWMSGRKLGVSC
Sbjct: 184 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSC 243

Query: 295 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH------------------------- 354
           VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH                         
Sbjct: 244 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVCLYYYITISNHSNLIFPFLIVK 303

Query: 355 --FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 414
             FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK
Sbjct: 304 NLFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 363

Query: 415 DRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGL 474
           DRIFELADKLGQTIIFV TR SAGVLHKALVDLGYDVTTI+GAMTNDIRDKIIKEFKDGL
Sbjct: 364 DRIFELADKLGQTIIFVATRNSAGVLHKALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGL 423

Query: 475 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 514
           TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA
Sbjct: 424 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 483

[Close]

BLAST of Cucsat.G12511 vs. ExPASy TrEMBL
Match: A0A5D3DNK6 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003240 PE=4 SV=1)

HSP 1 Score: 831 bits (2146), Expect = 3.65e-300
Identity = 434/487 (89.12%), Postives = 440/487 (90.35%), Query Frame = 0


Query: 55  DDAAPGSTTNDSYCDATITHSPTTAPFVVSPLPKRGWGDEEHHDVVADTGDLSSVPSEVM 114
           DD AP ST+N S CDATITHSP+TAPFVVSP+PKR WG+EE  DVVADTG  SSVPSEVM
Sbjct: 4   DDVAPDSTSNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVM 63

Query: 115 ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 174
           ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI
Sbjct: 64  ESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKPSKI 123

Query: 175 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQN 234
           QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQ 
Sbjct: 124 QAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQ- 183

Query: 235 IEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLGVSC 294
             V   +  YTGITSECAVPADSANYMPVSKRPP TAQVVIGTPGTIKKWMSGRKLGVSC
Sbjct: 184 --VRTSLLLYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLGVSC 243

Query: 295 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH------------------------- 354
           VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSH                         
Sbjct: 244 VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVCLYYYITISNHSNLIFPFLIVK 303

Query: 355 --FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 414
             FQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK
Sbjct: 304 NLFQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIK 363

Query: 415 DRIFELADKLGQTIIFVGTRKSAGVLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGL 474
           DRIFELADKLGQTIIFV TR SAGVLHKALVDLGYDVTTI+GAMTNDIRDKIIKEFKDGL
Sbjct: 364 DRIFELADKLGQTIIFVATRNSAGVLHKALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGL 423

Query: 475 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 514
           TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA
Sbjct: 424 TKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRA 483

[Close]

BLAST of Cucsat.G12511 vs. ExPASy TrEMBL
Match: A0A0A0KR39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G308770 PE=4 SV=1)

HSP 1 Score: 795 bits (2053), Expect = 6.70e-287
Identity = 410/470 (87.23%), Postives = 434/470 (92.34%), Query Frame = 0


Query: 53  MVDDAAPGSTTNDSYCDATITHSPTTAP-FVVSPLPKRGWGDEEHHDVVADTGDLSSVPS 112
           M D AAP STT+ S   A  T   ++AP  V++P+PKR WGDEE  DVV ++GD SS PS
Sbjct: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVV-ESGDSSSAPS 60

Query: 113 EVMESLKIEDETTLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKP 172
           E +ESLKI+D+T LEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEM+FHKP
Sbjct: 61  EYLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKP 120

Query: 173 SKIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELA 232
           SKIQAISLPMILTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELA
Sbjct: 121 SKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELA 180

Query: 233 MQNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPTTAQVVIGTPGTIKKWMSGRKLG 292
           MQNIEVLKKMGKYTGITSECAVPADSANY+P+SKRPP TAQVVIGTPGTIKKWMS RKLG
Sbjct: 181 MQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLG 240

Query: 293 VSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHFQVLLFSATFDENVKNFVSRVV 352
           VSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSS H QVLLFSATFDENVKNFVSRVV
Sbjct: 241 VSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV 300

Query: 353 KDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVGTRKSAG 412
           KDYNQLFVKKEELSLESVKQ+KLICP+E TKIRVIKDRIFELADKLGQTIIFV TR SAG
Sbjct: 301 KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAG 360

Query: 413 VLHKALVDLGYDVTTIKGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVIN 472
           +LHKALVDLGY+VTTI+GA+T +IRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVIN
Sbjct: 361 MLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVIN 420

Query: 473 YDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKGKFPLLLY 521
           YDLPLK++PS QA KYRSSS SEPN+EVYLHRIGRAGRFGRKGKF  LLY
Sbjct: 421 YDLPLKYEPSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGKFLCLLY 469

The following BLAST results are available for this feature:

BLAST of Cucsat.G12511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZG7	7.7e-153	60.71	DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 P...	[more]
Q10RI7	1.2e-134	63.08	DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q2TBP1	8.5e-75	41.54	ATP-dependent RNA helicase DDX25 OS=Bos taurus OX=9913 GN=DDX25 PE=2 SV=1	[more]
Q5AJD0	1.4e-74	39.54	ATP-dependent RNA helicase DBP5 OS=Candida albicans (strain SC5314 / ATCC MYA-28...	[more]
Q9QY16	5.5e-74	41.28	ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus OX=10116 GN=Ddx25 PE=1 SV=...	[more]

BLAST of Cucsat.G12511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137993.3	0.0	100.00	DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus] >KAE8651061.1 hypotheti...	[more]
XP_008442767.1	7.55e-315	96.09	PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo]	[more]
KAA0043945.1	7.57e-310	90.97	DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo var. makuwa]	[more]
TYK25195.1	7.54e-300	89.12	DEAD-box ATP-dependent RNA helicase 38 [Cucumis melo var. makuwa]	[more]
XP_038906287.1	8.11e-285	87.79	DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906288.1 DEAD-...	[more]

BLAST of Cucsat.G12511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDT3	0.0	99.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746560 PE=4 SV=1	[more]
A0A1S3B601	3.65e-315	96.09	DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo OX=3656 GN=LOC103486545 P...	[more]
A0A5A7TRB4	3.67e-310	90.97	DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3DNK6	3.65e-300	89.12	DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KR39	6.70e-287	87.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G308770 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 115..320 e-value: 1.4E-36 score: 137.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 129..305 score: 23.190769
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 359..459 e-value: 1.3E-23 score: 94.4
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 331..459 e-value: 3.7E-23 score: 82.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 333..499 score: 19.666046
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 312..499 e-value: 7.0E-42 score: 144.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 78..311 e-value: 3.0E-54 score: 185.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 167..475
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 121..293 e-value: 5.7E-34 score: 117.4
None	No IPR available	PANTHER	PTHR47958:SF31	DEAD-BOX HELICASE DBP80	coord: 74..489
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 74..489
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 317..468 e-value: 3.14342E-39 score: 136.868
None	No IPR available	CDD	cd17963	DEADc_DDX19_DDX25	coord: 102..305 e-value: 3.65888E-99 score: 295.253
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 95..124 score: 9.577528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12511.T1	Cucsat.G12511.T1	mRNA
Cucsat.G12511.T2	Cucsat.G12511.T2	mRNA
Cucsat.G12511.T3	Cucsat.G12511.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0071944	cell periphery
cellular_component	GO:0010494	cytoplasmic stress granule
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding