Cucsat.G12499 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12499
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1837: 3237631 .. 3240629 (+)
RNA-Seq Expression	Cucsat.G12499
Synteny	Cucsat.G12499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAAAGAAATGGAAAAGGGTAAGACGTGGGAAATTGCAGATTGCACCTTGATGTTGTTGGTATTTAATTTGTAATCCATGGTTTGATGGAAGGTTTGTTGAAGGTGAGGTTGTTCGAGATTTTACTTGTATGGATTATGTGATGGGGTTTTAAGCTTAAAACCCGTGGCTCAAACTTTGTCATCTTTCTTCCTCATCTTCTCTCCACTCTCATTCAATCTCTTCACGATTATCCGCATCTTAGTGATCTTCACCCTTCTTCTCTCTACTCCCCTGCTCTCTCAACTCCGCCCCTCCCAATTATGTCCAAGAAAGGGCTTCCCGGTGGAGCCCCGCTTTCAAAGGACGCCCCTTGGAGGGCCTCCGGCAAACCCATTCCCAAAATCAACCATGCTCCTCTGCTCCGCATTTCCCAATCTCCCTTTTCCAATTACGCTCTCTCTGTAATGAAGGCAAGTTCTCTCATTCTTTTCCCACTCCCTTTTTTGTTTGATTGTTTTCTTGATTCAAGGGGGACTTTCTTAATTTTGTTTTTGCAGCATCCTGATCCTATTGGAAGTGGCTTGGCTACGGATGCCATTTTGGAAGCCGCTGGCCCTGATTGTATTGTGCCTGGACAATCCGCACCTGTTAAATTGCTTGGTCTCAAGGTACTGTTTCTTCTATCCATCTTTTCTTTCTTGTAACCCTTGTTTTATTTTCCTGGGATTACTTGAAATTTCAACTTCTGGGGTTTTCTTAGCTTTGTTTTCTTTAATTCAGCGTGTTTGAATTTCGGTAATTGGCTTTGCTGATTACTTCTACATTTTTGTGATGCTTTCAAATTGCCAGTAAATGAATTATGTATTTCTGCAAACTTTTGGATGGTGATTTTGCTTGAGAATGTGTTGAAATTGGACATTTACCTTTAGAATGCTTTAGGGAGAAGTAGTGGATGAAGTGAAAAACCCTTTTTTTTCAGTATCTTCTGGGTACTGCACAAACGTAGTTAAAGAGTAGAAGAACGAATTCTAATGCGAACAACTTATTAACTTGACCCATTTAGCCATAAAATTGTGTGTAAATTTGTACAAATTGGCTACTTCAGTAACAAACTGATGGTGTGCATGATTTTTGGGGTAACTAAACACTTCTTCATTTAGTTGTTTTGGAGAAACTACTAGTTCACAGTTCTTTGAAAAAACACTTCTGATCGTGTAAACAATGGATGAGAAAATTCGTAGTTTGCGATTCTGGAAGTTAAGCTAAGCCCACTCTGAACCATCCACATTTAGAACGTATATCAAAATATTATCAAGATATCAAAATCTTAGCCTGTTACATTGTCATTATTTTAGCAAATAACTTCATAGCAATGTCGTGTCTTGTTGATGATCTGTTCAATGTTTCAATGTTAGAAGGTAGGACGAGGGGCTAGAGGGGTTGATGAGGCCATATTTTGTAGTGTGGTGAAATAAGTATTGTTATAAATAATGGATGCTTCTTTATCTCAGTGAAAATGCAAACTACAGATTTGAGTTAAGAAATACCAATGAATCTCAGTAACTGGTTTGTTAATCTCTAGTTGTCTTTATCTGAGATAATAGAGAGGAAAATGATAAACCTTCAATAGACCACAATAACAGAAATTACAGTAAATGAATTAAGGAGTTTATATGGTGTTTTCTGTAATTAGTTATTTTATTTTATTTTATTTAGAATAGTATTGATTTGCATTGGTCTTAACTCTTTTCAACTATTTAGTGAGTCAATGACTGAGTAAAAGATGGGAAGGATCTTAAAGTCATGTTTGATATCAGTATTCTAAGAGAGTTGTTCGAGCTCTTATACGGTTGAAGTAAGATGCAATGCAATCTATATTATCAACGCAGTTTGTGTATGAGTTGAGTCATTGATTATTGTTTTTATGCTATCAGAAAAATGTTAAAGATGCTATGGCTTTAATTGTAGGGTGGATGCCAGTTGTACTTCTTTATCATTGTTAAAATGAAACAATATTTTGAGCTTAGGATAACTCTTTTGCTGCATATTTTGGTCTTATTTAGCCACTTGTGGACAGGTATGGCCCATTGATGTCGATCTGAAGTTTCTTGAGCCTGTTGGCCGTGAGCTTAAATTACTTGGAAAGGTAAATGGGAACAACTCTATATCTGTAAAAATTTTCTTTTCTCCCTGTATGTAGGTGTTTTAGTGCTTGGAAGTATATATATTGGTTTTACTTTCAAGAAACCTCATTGTCTCCCAATCCAGACGTGGATTTGGCCTTGGGTGGGTAAAACATCCTAAAAAATTAACACAACCATAGGAGTGATTCATGTTCAATAATCCAGTTATAAAAAGAACAAAGGAAGTAATTGTCTGTATTGAAATCATGTCAATCGTGTTTTAAACTGATCAATCCACATTGTAGAAGCATGAAATCAGGACAAGTTTTTTTTTATCCATAATTCAGATATTCACCCTATCAGATTTTGGGTGAAGTAGGATGAAGTTTTCCTATTCTTATTGTTGCCTCTTCTATTTGCAAAACATGATCTTGGAGTTGAAACAATATAGACACAAAATTTAATATTTTAGTTTTAGCCTTGAGACATTGAGGAATCTGACCAGCAATTTTTTTTTTATAAAATTATTGTCACTATTCTCATTCTTCTGTTGTTTTTCTTCCCTCTGAAGTTTATGGATGATGCGGTGGACCTCATGAACAAGTCGTTTATTGATCGCTAGACATGGCAGTTCTAATCGATGATGAAAAGTTGCATAGAAGCTGCAATTTTAGCTGGCTCTATGAGTGGCAACTTATACACCGGAATTGTCTTTTGATGATTGACTCTTATTACTAAATCTTCACATGTAAAAACAGTCTCTGGCCTCTGAAAGCGGTTTCGTTACTCCCGTTTCTGTGGCTTTTCATTTTGACTCTTAATAGTGAAGTGCCTTGTAAGGGTTTTCCATGGAGTTTTGATTGATAAAGGTTATTGTGTAAAATAAGCATTAATCAATGGCTCATCCAATTTTCACCCTCGTTGCTCAAGTGTCTACCAAAACACAATTAATTCCTTTTTGTACGCCATAGTTTCTACAGCAACAAATGCAATAATATTCAACATGATGGTTATGATCATAATGTTAATGATATAGGGATTACTGCACGTTGTGTGGTTTTAATTTAGGGATTTTACAAATACTGTGAAATGTATGTATGGT

Coding sequence (CDS)

ATGTCCAAGAAAGGGCTTCCCGGTGGAGCCCCGCTTTCAAAGGACGCCCCTTGGAGGGCCTCCGGCAAACCCATTCCCAAAATCAACCATGCTCCTCTGCTCCGCATTTCCCAATCTCCCTTTTCCAATTACGCTCTCTCTGTAATGAAGCATCCTGATCCTATTGGAAGTGGCTTGGCTACGGATGCCATTTTGGAAGCCGCTGGCCCTGATTGTATTGTGCCTGGACAATCCGCACCTGTTAAATTGCTTGGTCTCAAGGTATGGCCCATTGATGTCGATCTGAAGTTTCTTGAGCCTGTTGGCCGTGAGCTTAAATTACTTGGAAAGTTTATGGATGATGCGGTGGACCTCATGAACAAGTCGTTTATTGATCGCTAG

Protein sequence

MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGKFMDDAVDLMNKSFIDR

Homology

[Close]

BLAST of Cucsat.G12499 vs. NCBI nr
Match: XP_004137845.1 (uncharacterized protein LOC101222625 [Cucumis sativus])

HSP 1 Score: 227 bits (579), Expect = 1.50e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA
Sbjct: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK
Sbjct: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. NCBI nr
Match: KAE8651047.1 (hypothetical protein Csa_001390 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 2.52e-70
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALS   HPDPIGSGLA
Sbjct: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALS---HPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK
Sbjct: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 107

[Close]

BLAST of Cucsat.G12499 vs. NCBI nr
Match: XP_008442724.1 (PREDICTED: uncharacterized protein LOC103486514 [Cucumis melo])

HSP 1 Score: 213 bits (541), Expect = 9.32e-69
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKGL GGA LSKDAPWRASGKPIPKI+HAPLLRISQSPFS+YAL+VMKHPDPIGSGLA
Sbjct: 1   MSKKGLGGGAALSKDAPWRASGKPIPKIHHAPLLRISQSPFSDYALAVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDA+LEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLK LEPVGRELKLLGK
Sbjct: 61  TDAVLEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKVLEPVGRELKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. NCBI nr
Match: XP_038903012.1 (uncharacterized protein LOC120089717 [Benincasa hispida])

HSP 1 Score: 213 bits (541), Expect = 9.32e-69
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKGL GGA LSKDAPWRAS KPIPKI+HAPLLRISQSPFSNYALSVMKHPDPIGSGLA
Sbjct: 1   MSKKGLGGGAALSKDAPWRASSKPIPKIHHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDAILEAAGPDCIVPGQSAPVKLLGLKVWPID+DLK LEPVGRELKLLGK
Sbjct: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKVLEPVGRELKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. NCBI nr
Match: XP_022144765.1 (uncharacterized protein LOC111014375 [Momordica charantia])

HSP 1 Score: 209 bits (532), Expect = 2.20e-67
Identity = 100/110 (90.91%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MS+K + GGA LSKDAPWRASG+PIPKI+HAP+LRISQSPFSNYALSVMKHPDPIGSGLA
Sbjct: 1   MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDAILEAAGPDCIVPGQSAPVKLLGLKVWPID+DLKF EPVGRELKLLGK
Sbjct: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGRELKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. ExPASy TrEMBL
Match: A0A1S3B749 (uncharacterized protein LOC103486514 OS=Cucumis melo OX=3656 GN=LOC103486514 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 4.51e-69
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKGL GGA LSKDAPWRASGKPIPKI+HAPLLRISQSPFS+YAL+VMKHPDPIGSGLA
Sbjct: 1   MSKKGLGGGAALSKDAPWRASGKPIPKIHHAPLLRISQSPFSDYALAVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDA+LEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLK LEPVGRELKLLGK
Sbjct: 61  TDAVLEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKVLEPVGRELKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. ExPASy TrEMBL
Match: A0A6J1CSK2 (uncharacterized protein LOC111014375 OS=Momordica charantia OX=3673 GN=LOC111014375 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 1.06e-67
Identity = 100/110 (90.91%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MS+K + GGA LSKDAPWRASG+PIPKI+HAP+LRISQSPFSNYALSVMKHPDPIGSGLA
Sbjct: 1   MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDAILEAAGPDCIVPGQSAPVKLLGLKVWPID+DLKF EPVGRELKLLGK
Sbjct: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGRELKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. ExPASy TrEMBL
Match: A0A5A7TQX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002850 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 7.60e-65
Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKGL GGA LSKDAPWRASGKPIPKI+HAPLLRISQSPFS+YAL+   HPDPIGSGLA
Sbjct: 1   MSKKGLGGGAALSKDAPWRASGKPIPKIHHAPLLRISQSPFSDYALA---HPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
           TDA+LEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLK LEPVGRELKLLGK
Sbjct: 61  TDAVLEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKVLEPVGRELKLLGK 107

[Close]

BLAST of Cucsat.G12499 vs. ExPASy TrEMBL
Match: A0A6J1FEU8 (uncharacterized protein LOC111443428 OS=Cucurbita moschata OX=3662 GN=LOC111443428 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 3.41e-64
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKG  G  P+ KDAPWRA+GKP PKI+HAP+LRI+QSPFSNYA+SVMKHPDPIGSGLA
Sbjct: 1   MSKKGAAGRTPVLKDAPWRAAGKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
            DAILE+AGPDCIVPGQ+APVKLLGLKVWPIDVDLKFLEPVGR+LKLLGK
Sbjct: 61  MDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEPVGRDLKLLGK 110

[Close]

BLAST of Cucsat.G12499 vs. ExPASy TrEMBL
Match: A0A6J1KUA5 (uncharacterized protein LOC111498726 OS=Cucurbita maxima OX=3661 GN=LOC111498726 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 9.77e-64
Identity = 94/110 (85.45%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MSKKGLPGGAPLSKDAPWRASGKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIGSGLA 60
           MSKKG  G  P+ KDAPWRA+ KP PKI+HAP+LRI+QSPFSNYA+SVMKHPDPIGSGLA
Sbjct: 1   MSKKGAAGRTPVLKDAPWRAAAKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLA 60

Query: 61  TDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110
            DAILE+AGPDCIVPGQ+APVKLLGLKVWPIDVDLKFLEPVGRELKLLGK
Sbjct: 61  MDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGK 110

The following BLAST results are available for this feature:

BLAST of Cucsat.G12499 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G12499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137845.1	1.50e-74	100.00	uncharacterized protein LOC101222625 [Cucumis sativus]	[more]
KAE8651047.1	2.52e-70	97.27	hypothetical protein Csa_001390 [Cucumis sativus]	[more]
XP_008442724.1	9.32e-69	93.64	PREDICTED: uncharacterized protein LOC103486514 [Cucumis melo]	[more]
XP_038903012.1	9.32e-69	94.55	uncharacterized protein LOC120089717 [Benincasa hispida]	[more]
XP_022144765.1	2.20e-67	90.91	uncharacterized protein LOC111014375 [Momordica charantia]	[more]

BLAST of Cucsat.G12499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B749	4.51e-69	93.64	uncharacterized protein LOC103486514 OS=Cucumis melo OX=3656 GN=LOC103486514 PE=...	[more]
A0A6J1CSK2	1.06e-67	90.91	uncharacterized protein LOC111014375 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5A7TQX6	7.60e-65	90.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FEU8	3.41e-64	85.45	uncharacterized protein LOC111443428 OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
A0A6J1KUA5	9.77e-64	85.45	uncharacterized protein LOC111498726 OS=Cucurbita maxima OX=3661 GN=LOC111498726...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR36737	EXPRESSED PROTEIN	coord: 8..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12499.T1	Cucsat.G12499.T1	mRNA
Cucsat.G12499.T2	Cucsat.G12499.T2	mRNA
Cucsat.G12499.T7	Cucsat.G12499.T7	mRNA
Cucsat.G12499.T5	Cucsat.G12499.T5	mRNA
Cucsat.G12499.T8	Cucsat.G12499.T8	mRNA