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Cucsat.G12453 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGTTGGAAAAGGTGACGAAGGTGTCAATAACTGATTCATCAAACACTATCCATTGCTCTATAGTCACGAGCATGGGGGAGATTTTCAGGTGCTCTTTCTGAAGTAAATCAAGTGTCCAGAGAGAGTCAACACAGCACATATAGAGCAAGAGGAAGTATATGAATTATTAGCAAGAGTTGAGGTGAGCGACTAAACATTTTACTTGGTGTTTACTTTCTCATCATGATGGACAACAGAGTCAAGAATTGCTCTCTAGGTTGACTGCAAAAAGATGTATAGTTTTCCACAGGCCCATTAAACTTTTTTTAAAAATCCAAAATCTTGATTGCTAAAGCCCAGTCTCAGGTCCAGTCCTTTTGTTATTTTTACTCATCTAGTTCAGATGATCTGTGAATATTGAGTCAAGTGTATGACAAATAATATCATCTCCAGTAGACCCTTGCAGCATGAATTAATTATTTAAAGTTCGTTATCTTGTGAAACAAATAACAAACATCTTTGAATTAGTTATTTTATAGTTTATTATTGACTTTGATTCTTCTTATTTAGAGTAGGTCAACCAATTCACTTGAAGAATCTGATGGTTGAAGTTTTCTTAAAAGGGAGTTGCTAGCTCAACTGCAACCGCCTGATTGTTGATGTGTGTCTATTATAGAAAAAACCATTAACTTACTGAAAATAATTGTGTATTTCTTTCTTAATTAATTGGTAAAAGCGTTTGATTGTTGCAAGGAATCATACAACCAAAAATTTACATATGCATAATATCAATTGACGTATTGAAGACTACAGCAAATATGTAGCCATTATACGGCATATTATATTTTAATATATTTGACAATTCTGTTTCTGTTTCATGCCATACACAAGCTATAGTTTGAACTTAATAGTGATTCATGAAGACATACGAAAATTTCAATTCTTGTTAGTCGTGGAAAAGGAAATAAATAAAACGAAGTTAATTGGGGTCTGAATTTTCTTCTTGTTTGTATATGACTATCTAAGCAGCCAAAAAAAGAAGTTTCTTTGTGTGAGAGAATTTTAACACAAGCCATCTCTCGTTAAGAACAGTTGGGCGTCTATCAAATATTAAGCGACCATGGTAGGTGATCTTTGACACTTGCACCCCAAACCATCATTCGTTAAGCTTCTATCATTGTCTAAAATAAACATACTGTTTTCTTCCATCTTTTTCTCTTTTGGGTTGTTGATCAGGTTCATCCCACCGTCTCATCCTAAACTTGAGAAGAGCTTCAATGGCAGAACACCATCCTTTAGATATTCAAATCAATTCCCGGCAAGGTACTGCAATCCACCCTATAGAGGCGGATGGCCAGTCGTTACAGGCATCAGGTTCAGTTGCTTTTTGGGAAGTCAAGCAATTCAGGAAATGGATACCTTGGTTAATTCCATCATTTGTTATAGCCAATATTGTTACGTTCTTTATCACCATGTCCGTTAATAACTGCCCTAAGAATTCAGTCTCTTGTATTGCTCGATTCTTGGGTAGATTCTCTTTCCAGTCCCTAAAAGAAAATCCTCTGCTTGGACCTTCATCTCTAACGTAAGTTGCTTTCACTGAATTCTTCCTTTTTTTTTCTTCCAGAATCCAGTTTGTATCAGTTAATCTTAAACTTTTCATCATTCAAGTGGTATAAATTTTCTGGGTTATTGCAAATTAATATGAACTATGCATCTTCCACTGAACCAGTTATTGCTTGTGTTTCAGGCTACGGAGGATGGGTGCACTAGAAGTTAATAAAGTTGTTCATGGAAACCAACTATGGCGTCTTATTACTTGTATATGGTTACATGCCGGTGTTTTTCATTTATTGGCAAATATGTTAAGTCTCTTGGTCATTGGAATTCGTCTTGAACAAGAATTCGGATTTAGTATGTATCTTTTATCATTCTTTCTTTTTCTTTTCTGGTGTTGGTAGCAGAACTATTGTTGGGCACTTTATTAAGAGTTATGTTTGTTGTATTCTCGGATATGGATTCTTTTATGTTTATATATTTAGTGGATTTGATCATCGCCATTCCACCCCTTACAAATTCGTTTGTGGATGTTTTACAGTACGGATAGGTTTGCTATATGTTATATCTGGATTTGGTGGGAGTCTGTTGTCTTCACTATTCATCCAATCTAACATTTCTGTTGGGGCTTCTGGTGCCTTATTTGGGTTGCTCGGAGGAATGCTTTCTGAACTCATCACTAACTGGACGATATATTCTAATAAGGTAGTCTTCAAAACGCATTTGTATTGGAATTTTCATATGAATCCTGACACTTGTCTTGGTTGTATTTTCTCGTCTTGTTGCCCCTTCAGGTTGCAGCTCTTGTTACTCTGTTGGTTATTATAGCGATCAATTTGGCAGTAGGAATTCTTCCTCATGTTGACAATTTTGCTCATATTGGAGGATTTATTTCTGGATTTCTTCTGGGGTTTGTATTTCTCATTCGCCCGCAGTTTGGATGGGTTAGCCAAAGATATACTTCTCAAACAAATTCTTCCTTTGGTGCCAATCATAAATTCAAGATATATCAATGTGTATTGTGGATCATTTCGCTAATACTTCTGATTGCCGGGTAACCAAATCACTCTATATTTCTACTCCCTTCTACCAATTCTATTGAGAGAGCATACAAAATTAGACGTGGAGTCACAGGGTATACCACAAGTAACCACGAACTTGTCCAAATATGCTTATAACTCTTGTTTTGATGGTGAAACAATATTCCAGTGTCCTATTTAACATTCTTTAGCTATTACACACGACGATAATCTTCAGAAATGTTTTTGTAATTATGGAAGGAATGATCTTGGAAAAGTTGTTAGGTTACTCCACGCCGTTTGTGGGTTTTGCCCTATAAACTACACTGGCAATTCTGAAATGTTGGGTAATTGGTTGCCCACTAGAAGTAAATACACCTTCACTCTATGATCTGAACACTTTATTCCTTCTAATGCCTTAAAACTGGACTCATGAAATGAGACCATGTTCTAGAGAGATTGTCTGTAATGCAACCTCAGATTCATTGTTGGTTGTAGTTCTTTAATTCCAAGGTCTCTTATTGACAGTAAAACTAAAAGATTCTTTATTTCAAAGAAGTTATTGAGAGTATACCTATCTTGTTGGCCTATTTGAGCAAAGATGTAGGAATTTCGAAACTGATTACTGATCTAAGATGTTATTTTCAGGTTCACCGTTGGTATGGTTTTACTTAGTCGAGGATTTGATGCAAACCGTCATTGTTCTTGGTGTCATTATTTGTCTTGCGTTCCTACTTCAAAATGGAGCTGTAATTCAGAACCTACATACTGTTTGGTAATATTTCCTTCTGCATTCTCTTTTCTCTGTTATTTTCTCCTTCGTTTTTTCTTGCAGAGTATTTTCTATAGCCTTTCCTATCAAAATTCAAGCGCTACTTAACAAGTATTCAAGGCCCTATCTTATAGTCATTTTGTTGTGTCTATTTTTTGGGAAAAAGTCACTTGACCCTACCCTAAACTTCCCATTCTAGGTGTTAATTTTACCTCTGTTCAATTGCTTTCTAATTTGTCCAATTTTAATGGAAAACAGTATACAAATATTCACAAACGCATTAATCAATCAAATAAAATTTACCAAAAAATCAAATTAGTGATGCACAAATTAAGCATCTAAAATTTTTTAGTAGCAACTCTTTTTTAATCTAACTGTTTGGTAGTAGCAACTTGAATCTAAACTTTTTCCAAATTTCCACTGTGGTTTTCAGTCACAGCAAGTAGGTAACCAGTTGAATCTAACATGCTCAAGCAACGGCAAATTCAGGACGTATATTCTACCAAATGCTTCAAATTCAGCGATACAAGGTTTGTGTTCTAGTCTTTGCAATTGATTTAATGTAAACTAGATCACTCGAGATTTGAGAAAATCACCCTTTGTTGGACATGTTTCATTGCGAAATATGCTTCTCTTCTTACTTCTTTTTGTATATGATATGTTTTTTTACCCCAAAACTCTTACCTAAGT ATGGCAGAACACCATCCTTTAGATATTCAAATCAATTCCCGGCAAGGTACTGCAATCCACCCTATAGAGGCGGATGGCCAGTCGTTACAGGCATCAGGTTCAGTTGCTTTTTGGGAAGTCAAGCAATTCAGGAAATGGATACCTTGGTTAATTCCATCATTTGTTATAGCCAATATTGTTACGTTCTTTATCACCATGTCCGTTAATAACTGCCCTAAGAATTCAGTCTCTTGTATTGCTCGATTCTTGGGTAGATTCTCTTTCCAGTCCCTAAAAGAAAATCCTCTGCTTGGACCTTCATCTCTAACGCTACGGAGGATGGGTGCACTAGAAGTTAATAAAGTTGTTCATGGAAACCAACTATGGCGTCTTATTACTTGTATATGGTTACATGCCGGTGTTTTTCATTTATTGGCAAATATGTTAAGTCTCTTGGTCATTGGAATTCGTCTTGAACAAGAATTCGGATTTATACGGATAGGTTTGCTATATGTTATATCTGGATTTGGTGGGAGTCTGTTGTCTTCACTATTCATCCAATCTAACATTTCTGTTGGGGCTTCTGGTGCCTTATTTGGGTTGCTCGGAGGAATGCTTTCTGAACTCATCACTAACTGGACGATATATTCTAATAAGGTTGCAGCTCTTGTTACTCTGTTGGTTATTATAGCGATCAATTTGGCAGTAGGAATTCTTCCTCATGTTGACAATTTTGCTCATATTGGAGGATTTATTTCTGGATTTCTTCTGGGGTTTGTATTTCTCATTCGCCCGCAGTTTGGATGGGTTAGCCAAAGATATACTTCTCAAACAAATTCTTCCTTTGGTGCCAATCATAAATTCAAGATATATCAATGTGTATTGTGGATCATTTCGCTAATACTTCTGATTGCCGGGTTCACCGTTGGTATGGTTTTACTTAGTCGAGGATTTGATGCAAACCGTCATTGTTCTTGGTGTCATTATTTGTCTTGCGTTCCTACTTCAAAATGGAGCTGTAATTCAGAACCTACATACTGTTTGTCACAGCAAGTAGGTAACCAGTTGAATCTAACATGCTCAAGCAACGGCAAATTCAGGACGTATATTCTACCAAATGCTTCAAATTCAGCGATACAAGGTTTGTGTTCTAGTCTTTGCAATTGA MAEHHPLDIQINSRQGTAIHPIEADGQSLQASGSVAFWEVKQFRKWIPWLIPSFVIANIVTFFITMSVNNCPKNSVSCIARFLGRFSFQSLKENPLLGPSSLTLRRMGALEVNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIRIGLLYVISGFGGSLLSSLFIQSNISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTLLVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANHKFKIYQCVLWIISLILLIAGFTVGMVLLSRGFDANRHCSWCHYLSCVPTSKWSCNSEPTYCLSQQVGNQLNLTCSSNGKFRTYILPNASNSAIQGLCSSLCN Homology
BLAST of Cucsat.G12453 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 1.5e-105 Identity = 191/264 (72.35%), Postives = 226/264 (85.61%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy Swiss-Prot
Match: F4JBM4 (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 3.3e-100 Identity = 183/294 (62.24%), Postives = 226/294 (76.87%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.5e-92 Identity = 174/283 (61.48%), Postives = 220/283 (77.74%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.2e-91 Identity = 168/274 (61.31%), Postives = 213/274 (77.74%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 9.9e-81 Identity = 148/259 (57.14%), Postives = 197/259 (76.06%), Query Frame = 0
BLAST of Cucsat.G12453 vs. NCBI nr
Match: XP_011651893.1 (RHOMBOID-like protein 1 [Cucumis sativus] >KAE8651010.1 hypothetical protein Csa_002249 [Cucumis sativus]) HSP 1 Score: 580 bits (1496), Expect = 2.45e-207 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G12453 vs. NCBI nr
Match: XP_008442542.1 (PREDICTED: RHOMBOID-like protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 569 bits (1466), Expect = 9.42e-203 Identity = 290/299 (96.99%), Postives = 295/299 (98.66%), Query Frame = 0
BLAST of Cucsat.G12453 vs. NCBI nr
Match: XP_008442541.1 (PREDICTED: RHOMBOID-like protein 1 isoform X1 [Cucumis melo] >XP_016899760.1 PREDICTED: RHOMBOID-like protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 569 bits (1466), Expect = 9.77e-203 Identity = 290/299 (96.99%), Postives = 295/299 (98.66%), Query Frame = 0
BLAST of Cucsat.G12453 vs. NCBI nr
Match: XP_038903263.1 (RHOMBOID-like protein 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 532 bits (1370), Expect = 4.05e-188 Identity = 274/301 (91.03%), Postives = 283/301 (94.02%), Query Frame = 0
BLAST of Cucsat.G12453 vs. NCBI nr
Match: XP_023528619.1 (RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023528620.1 RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023528621.1 RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023528622.1 RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023528623.1 RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 522 bits (1345), Expect = 2.59e-184 Identity = 272/301 (90.37%), Postives = 282/301 (93.69%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy TrEMBL
Match: A0A0A0LDP6 (RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G734200 PE=3 SV=1) HSP 1 Score: 580 bits (1496), Expect = 4.89e-207 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy TrEMBL
Match: A0A1S3B6K7 (RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103486383 PE=3 SV=1) HSP 1 Score: 569 bits (1466), Expect = 4.56e-203 Identity = 290/299 (96.99%), Postives = 295/299 (98.66%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy TrEMBL
Match: A0A1S3B5X7 (RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103486383 PE=3 SV=1) HSP 1 Score: 569 bits (1466), Expect = 4.73e-203 Identity = 290/299 (96.99%), Postives = 295/299 (98.66%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy TrEMBL
Match: A0A6J1F3R1 (RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441887 PE=3 SV=1) HSP 1 Score: 519 bits (1336), Expect = 1.81e-184 Identity = 269/301 (89.37%), Postives = 281/301 (93.36%), Query Frame = 0
BLAST of Cucsat.G12453 vs. ExPASy TrEMBL
Match: A0A6J1J374 (RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481435 PE=3 SV=1) HSP 1 Score: 520 bits (1340), Expect = 8.66e-184 Identity = 271/301 (90.03%), Postives = 282/301 (93.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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