Cucsat.G12428 (gene) Cucumber (B10) v3

Overview
NameCucsat.G12428
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPAR1 protein
Locationctg1837: 2261467 .. 2262967 (+)
RNA-Seq ExpressionCucsat.G12428
SyntenyCucsat.G12428
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCCCTTTAAAAGCCGGCGTTGCTTTGTTTCTCTCTATTTATAGTCCTTTCCCCTTTTTTCTCTCCACAGTTTAAATTCTTTTTCTTCTTTTTCATATATATACAAAAACTGAATCTCCTCTCTCAATAATTCCTCCCTCCATTTTCCAATTTTACTTTACATTTCTTAGCCACACACACAAACATCTCTATTTACCCAATGGCTATCCCCAACAAATTCGCTTTCCTCTTTTGCATCTCATCTCTTTTCGTCTCTGCAGCTTTTGGTACGTTTTTCCTTCTTTCACACCTATTAATTTTGTTTGTTTTCTTTCCATATATAATCTCAACTTAATTATTTATTATGATTGTATTCATTTCTTTGTTAATTAACGTTAACAGGGGAAATTGTGTGTGAGGAATTGTCTGTGGATGTTTGTGCATTCTCAATAGCCTCATCTGGAAAGAGATGTTTGTTGGAGACATCAGAGACGAAAGAAGGAAAATTTGAATATCAATGTAGAACCTCTGAGGTTATTGTTGAATGGATGGCTGATTACATTGAGTCTGATCAATGCATCAATGCCTGTGGCCTCGACCGTAACTCCGTTGGTATCGCCTCCGATGCCCTCCTCGAGCCTCAATTCACTGCCAAGCTTTGCTCCCCTTCCTGCTACCAGAAATGTCCCAACATTGTTGACCTCTACTTCAACATGGCCGCAGGAGAAGGTCAGCAATATTTCATAATCTCTTAACAAGATTTTCCTTTTTTTAATCTCTTATAGCGCTTAACTTGAGATCAAAGGAAAGAACTCATTAGTTCTATTAATTAATATTGCATGATTATTTTAACTGAAAAAAAATTCCTTCATGATTAATTCTACTTTTTACTTTTCTTTTCTTTTCTGCATGCATTGGGAAGCTTCATAATACCTTGCTTAATTCTCTTGCAATAACATTTATATGAATCTGAAATATCTTCAACATAATAATTTCTTTTATATATTTATTAATACGTCATAAATTTTAATTATATTGCAGGAGTGTTCTTGCCTGACCTTTGTGAGAAACAACGTACGAACCCACGCCGTGCCATGGCACAGCTGTTGAGCTCCGGTGTTGCAGCAGGTCCAGTGTCATCAGCACAAATCAATGCAGTATTCCCCAACCATTATCGCTGAAGCCCCAGCTCCGATGTGAAAAGGAAGTTAATATTTTATTATTTGGTTGGTTAATATTGCTTCTTCATTATTGTTGATTTAATTTCCTTTGTACACATACACACACAGCTGAGGAAATAAATAGAATTGGTAAATGGGTTGTAAGGGAGAAACAAAAATATGAGTGAATCTCTTTAAAATTCACTTTTGTTTTGATAGCACTATACGTGAGACGTGACGATGTATTACGTCCTTTTCCATATCTTTTATTTTTCTTTTCAATATTCCCCATATAATACAATACAGTGAGTTGTGTAATAAAACTTTGTTTAATTTATTTATTAATTTCCTTCTTCCAATT

Coding sequence (CDS)

ATGGCTATCCCCAACAAATTCGCTTTCCTCTTTTGCATCTCATCTCTTTTCGTCTCTGCAGCTTTTGGGGAAATTGTGTGTGAGGAATTGTCTGTGGATGTTTGTGCATTCTCAATAGCCTCATCTGGAAAGAGATGTTTGTTGGAGACATCAGAGACGAAAGAAGGAAAATTTGAATATCAATGTAGAACCTCTGAGGTTATTGTTGAATGGATGGCTGATTACATTGAGTCTGATCAATGCATCAATGCCTGTGGCCTCGACCGTAACTCCGTTGGTATCGCCTCCGATGCCCTCCTCGAGCCTCAATTCACTGCCAAGCTTTGCTCCCCTTCCTGCTACCAGAAATGTCCCAACATTGTTGACCTCTACTTCAACATGGCCGCAGGAGAAGGAGTGTTCTTGCCTGACCTTTGTGAGAAACAACGTACGAACCCACGCCGTGCCATGGCACAGCTGTTGAGCTCCGGTGTTGCAGCAGGTCCAGTGTCATCAGCACAAATCAATGCAGTATTCCCCAACCATTATCGCTGA

Protein sequence

MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEYQCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNIVDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFPNHYR
Homology
BLAST of Cucsat.G12428 vs. NCBI nr
Match: XP_004137744.1 (uncharacterized protein LOC101218677 [Cucumis sativus] >KGN58812.1 hypothetical protein Csa_002214 [Cucumis sativus])

HSP 1 Score: 349 bits (895), Expect = 5.28e-121
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY
Sbjct: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI
Sbjct: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173

BLAST of Cucsat.G12428 vs. NCBI nr
Match: XP_008442484.1 (PREDICTED: uncharacterized protein LOC103486338 [Cucumis melo] >KAA0044137.1 PAR1 protein [Cucumis melo var. makuwa] >TYK25000.1 PAR1 protein [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (845), Expect = 2.07e-113
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAIPNK AFL  ISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY
Sbjct: 1   MAIPNKLAFLLFISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWMADYIE+DQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI
Sbjct: 61  QCRTSEVMVEWMADYIETDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCEKQRTNP RAMA+LLSSG+AA P+SSA+INAVFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPHRAMAELLSSGIAAAPMSSAEINAVFP 173

BLAST of Cucsat.G12428 vs. NCBI nr
Match: XP_038905047.1 (uncharacterized protein LOC120091203 [Benincasa hispida])

HSP 1 Score: 317 bits (813), Expect = 1.56e-108
Identity = 154/173 (89.02%), Postives = 164/173 (94.80%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAI NK A +  ISSLFVSA+FGE+VCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY
Sbjct: 1   MAISNKLALVLFISSLFVSASFGELVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWMADYIE+DQCI+ACGLDRNSVGIASDALLEPQFTAKLCSP+CYQKCPNI
Sbjct: 61  QCRTSEVVVEWMADYIETDQCIDACGLDRNSVGIASDALLEPQFTAKLCSPACYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCE+QRTNP RAM +LLSSG AAGPVSSA +NAVFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCERQRTNPHRAMVELLSSGAAAGPVSSADVNAVFP 173

BLAST of Cucsat.G12428 vs. NCBI nr
Match: XP_022934276.1 (uncharacterized protein LOC111441487 [Cucurbita moschata])

HSP 1 Score: 297 bits (760), Expect = 1.87e-100
Identity = 144/173 (83.24%), Postives = 157/173 (90.75%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAI NK A L  ISS+FVSAA GE+VCEELSVDVCAFSIASSGKRCLLETSE K+GK EY
Sbjct: 1   MAISNKMALLLFISSVFVSAALGELVCEELSVDVCAFSIASSGKRCLLETSENKDGKLEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWM++YIE+D+CINACGLDRNSVGIASDALL+P+FTA LCSP+CYQKCPNI
Sbjct: 61  QCRTSEVMVEWMSNYIETDRCINACGLDRNSVGIASDALLDPRFTASLCSPACYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCE+QRTNP RAM +LLSSG AAGPVSSA    VFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCERQRTNPHRAMVELLSSGAAAGPVSSAAATGVFP 173

BLAST of Cucsat.G12428 vs. NCBI nr
Match: XP_023528262.1 (uncharacterized protein LOC111791231 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297 bits (760), Expect = 1.87e-100
Identity = 144/173 (83.24%), Postives = 157/173 (90.75%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAI NK A L  ISS+FVSAA GE+VCEELSVDVCAFSIASSGKRCLLETSE K+GK EY
Sbjct: 1   MAISNKMALLLFISSVFVSAALGELVCEELSVDVCAFSIASSGKRCLLETSENKDGKLEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWM++YIE+D+CINACGLDRNSVGIASDALL+P+FTA LCSP+CYQKCPNI
Sbjct: 61  QCRTSEVMVEWMSNYIETDRCINACGLDRNSVGIASDALLDPRFTASLCSPACYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCE+QRTNP RAM +LLSSG AAGPVSSA    VFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCERQRTNPHRAMVELLSSGAAAGPVSSAAATGVFP 173

BLAST of Cucsat.G12428 vs. ExPASy TrEMBL
Match: A0A0A0LDJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732680 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.55e-121
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY
Sbjct: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI
Sbjct: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173

BLAST of Cucsat.G12428 vs. ExPASy TrEMBL
Match: A0A5A7TQL9 (PAR1 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001180 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 1.00e-113
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAIPNK AFL  ISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY
Sbjct: 1   MAIPNKLAFLLFISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWMADYIE+DQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI
Sbjct: 61  QCRTSEVMVEWMADYIETDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCEKQRTNP RAMA+LLSSG+AA P+SSA+INAVFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPHRAMAELLSSGIAAAPMSSAEINAVFP 173

BLAST of Cucsat.G12428 vs. ExPASy TrEMBL
Match: A0A1S3B6J4 (uncharacterized protein LOC103486338 OS=Cucumis melo OX=3656 GN=LOC103486338 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 1.00e-113
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAIPNK AFL  ISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY
Sbjct: 1   MAIPNKLAFLLFISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWMADYIE+DQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI
Sbjct: 61  QCRTSEVMVEWMADYIETDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCEKQRTNP RAMA+LLSSG+AA P+SSA+INAVFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPHRAMAELLSSGIAAAPMSSAEINAVFP 173

BLAST of Cucsat.G12428 vs. ExPASy TrEMBL
Match: A0A6J1F1D5 (uncharacterized protein LOC111441487 OS=Cucurbita moschata OX=3662 GN=LOC111441487 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 9.05e-101
Identity = 144/173 (83.24%), Postives = 157/173 (90.75%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MAI NK A L  ISS+FVSAA GE+VCEELSVDVCAFSIASSGKRCLLETSE K+GK EY
Sbjct: 1   MAISNKMALLLFISSVFVSAALGELVCEELSVDVCAFSIASSGKRCLLETSENKDGKLEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWM++YIE+D+CINACGLDRNSVGIASDALL+P+FTA LCSP+CYQKCPNI
Sbjct: 61  QCRTSEVMVEWMSNYIETDRCINACGLDRNSVGIASDALLDPRFTASLCSPACYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCE+QRTNP RAM +LLSSG AAGPVSSA    VFP
Sbjct: 121 VDLYFNMAAGEGVFLPDLCERQRTNPHRAMVELLSSGAAAGPVSSAAATGVFP 173

BLAST of Cucsat.G12428 vs. ExPASy TrEMBL
Match: A0A6J1CV35 (uncharacterized protein LOC111015053 OS=Momordica charantia OX=3673 GN=LOC111015053 PE=4 SV=1)

HSP 1 Score: 296 bits (759), Expect = 1.29e-100
Identity = 144/173 (83.24%), Postives = 155/173 (89.60%), Query Frame = 0

Query: 1   MAIPNKFAFLFCISSLFVSAAFGEIVCEELSVDVCAFSIASSGKRCLLETSETKEGKFEY 60
           MA  NKFA L  +SSLF+SAA GE+VCEELSVDVCAFSIASSGKRCLLETSE K+GKFEY
Sbjct: 1   MAFSNKFAALLFVSSLFLSAAVGELVCEELSVDVCAFSIASSGKRCLLETSENKDGKFEY 60

Query: 61  QCRTSEVIVEWMADYIESDQCINACGLDRNSVGIASDALLEPQFTAKLCSPSCYQKCPNI 120
           QCRTSEV+VEWMA+YIESD CINACGLDRNSVGIASDALLEP FTAKLCSP CYQKCPNI
Sbjct: 61  QCRTSEVMVEWMAEYIESDHCINACGLDRNSVGIASDALLEPHFTAKLCSPPCYQKCPNI 120

Query: 121 VDLYFNMAAGEGVFLPDLCEKQRTNPRRAMAQLLSSGVAAGPVSSAQINAVFP 173
           VDLYFNMAAGEGVFLPDLCE+QRT+P RAMA+LLSSG AAGP+SS     + P
Sbjct: 121 VDLYFNMAAGEGVFLPDLCERQRTSPHRAMAELLSSGAAAGPMSSEAATGILP 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_004137744.15.28e-121100.00uncharacterized protein LOC101218677 [Cucumis sativus] >KGN58812.1 hypothetical ... [more]
XP_008442484.12.07e-11393.64PREDICTED: uncharacterized protein LOC103486338 [Cucumis melo] >KAA0044137.1 PAR... [more]
XP_038905047.11.56e-10889.02uncharacterized protein LOC120091203 [Benincasa hispida][more]
XP_022934276.11.87e-10083.24uncharacterized protein LOC111441487 [Cucurbita moschata][more]
XP_023528262.11.87e-10083.24uncharacterized protein LOC111791231 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A0A0LDJ22.55e-121100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732680 PE=4 SV=1[more]
A0A5A7TQL91.00e-11393.64PAR1 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001180 ... [more]
A0A1S3B6J41.00e-11393.64uncharacterized protein LOC103486338 OS=Cucumis melo OX=3656 GN=LOC103486338 PE=... [more]
A0A6J1F1D59.05e-10183.24uncharacterized protein LOC111441487 OS=Cucurbita moschata OX=3662 GN=LOC1114414... [more]
A0A6J1CV351.29e-10083.24uncharacterized protein LOC111015053 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009489PAR1PFAMPF06521PAR1coord: 25..169
e-value: 5.8E-72
score: 240.5
IPR009489PAR1PANTHERPTHR33649PAR1 PROTEINcoord: 8..168
NoneNo IPR availablePANTHERPTHR33649:SF4PAR1 PROTEINcoord: 8..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G12428.T1Cucsat.G12428.T1mRNA