Cucsat.G12375 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACCATGATGAGTAATGATTAATGTAATTTAGAATATAGAGATGGTTTGAAGTACTAAATAGACATAAATTTGGAAAATTTAATGTATAATAAATGTAAAAGTAGAGTAAATTTAGAGGGGAGAGATGGTGGTGAGAAGGGAGGTGAACAGGAAAAAGAGAGGAGAGAGAAACGAAGGGAAGGAGGTTATTTAAGGGAGAGAGAAGTCTGAAAGAGTAAGCAAAGCGGGAGCTCTGACCACCGGCTTATCAAATCCACCATCATCAACGCTCTTATCATATTCTGGATTAAGGTTTGTTCTTTTAATAACCCTTTTCTTCAATTTCATTTTCGTTCCGGATCATTTGCCTGAATTCCCTGTTTTGCTTTTTTGGAAAATATCGTAGAAAATTTAGCCAACTGAGATCTATTGCCCCTTTTTTCCTTTCTCTTTTTACCCCGAATGCCTTCTTTTCCAATTCTTCGATAAGATTGTGTCTATACAATTCTCTTTCGACGTTTTTTGAGTTGTTCTGAACAGGGGATCAGTTTTTAGTTCTTGATATTGTGTAATTTTTCCTTATCTGAGTCTACTCTTACTTTATTTTCGTCAAATTTCTCGCTTTAGTTGTTTTCTGATGGAGATAGCAAATGGGTTGTGCTTCTTTGTTTACTCTGACTATTCTTTCTAGCTAACTTTTCGGATTTCGTTTTGTTTCAGAAAGAGGGGAGGCATAAGAGGAACAATAAAATGGCTGCTGGAGGGTCTGGTTCTGGGCAGCCACAATTCCTTGTGAGAGCTGGGGATGAGAGTTTTTCGCATGCTCCGTTGATCGAGAACCCAGAAACTGATCAGATTATTGTTCCTGATGTGAGCCTTTTAGTTTCTTAATGTTTTGATGATTAATCCTTGTGAATTTTCAACTGATAGGAGAATTAGTCATTAAATTGCACTTTGAATGAGATTATATTAAAGTTTAAGCAACTTGTGTAAGCTATGGATTATGTGGTATGGAAAAAAGTGCTGAAGGAATTTTTTTGATTGAGAGCTACTGTTGCGTGTTATGTGCAGAAGAAAAGCTGGAAGAACCTTTTTGCATACATGGGCCCGGGATTTCTTGTTTCTATTGCATATATTGATCCTGGGAATTGTAAGCTTTCTAGTTTATCTCTTTTGTACACTACTTTTTCATTTGTGGTTTGTCTCTTTTATTCCATTATGAATGGGATTCTGAGATTTTGTTTGGTTATTCTCAGTTGAGACTGATCTGCAATCTGGTGCACAGTACAAGTATGGGGTACGTGGCTGGTCCTTTCGATATAGTTGCTTTACTTTTAACAACCATCAAACACATGATTTTGTGGTCAAAGGCTAAAGTTTATTATCATCTTTCAGTCTTTTATTCCCACACCCTTCTATGTGGATGGATTAGTTTAATAAGTAATAAACTAAGTATGCTGCTATGAAGAGCTGAGATGACCCATTCACCATAGGCCTCTTTGTTTATATAAATACATGTATGGTGCTACCTCCAGCCTAATTGCATAAATATACTCAAGACAAGTTTCAGAACTAGAAATTTTCTACAAGTTTTCAAATATGTAATGTACTGAGTTTTGAACAGGGTCCAATTTTGTTTATATTTATCTTTTCTTGTTGAAGCTGGTAACTCCTGTCATGTCACTAAAAGTCACTTGCTTGTTATATTCCTAGTGGACCTGACAACTAATACTGCTTCTCTCCGTGTAGTTGCTTTGGATCATATTAGTGGCTTCCTTTGCTGCCCTCATCATTCAGTCTTTTAGCAGCCAATCTAGGGGTTGTCACGGGTAAATGACTTCTGCATAACTTTTTTTTTTATTATCAAAAGTTGTGATATTTTCATAGTTCCAAGTGTTGTTTGACATCTTTGTCTTCTTGTTTTTATGGTAAGTGTAGGAAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGCGCAAAATTTCATCCTCTGGGTCCTTGCTGAAATTGCAATTGTTGCATGTGATATTCCTGAAGGTAATGTGAAGTGATTCTATTCATTAGGAACCTAATCGTTGAGTGAAAAATACTCTTGGTCATAGAAGAAATAAGCACACTTATTGCATGTTTAGTCTTTTGAATTCTGTGTACTCATGTTGGATGGCTTGTTTAAAATGAAATTTCTGAGATTTGTACAATAAAAGTTACCCAATTGAAAAGATTGTGTTTGGAGATTTATAGTAGTTGCTAATAGGCCAATATGAATGCATTGTTAAAGCTAGTATTGTAAGCTGATTTGATGCACATTGACCAACTGTAGTGTTTGACATTTCTGTGGTCAAGTGTACAAACCAAACCAAAAGCATATTTCGAGTTAAGTTAAATTATGTTCAGAGAAAAAATTGAATGTTCAGGAACTTATTATACCAAAAATTGAAAGTTTAGGGACCTATTAAACATATTTTAAAATTCATGAACCAAATAAATACAAATTTCAAAGTTTAAGGGACTGAGTATGTTATTTAACATTCGAGTTAAAATATGTAAACATAGGATCATGAGTTCCACAAGGAGAAGAAAATTATCATTATTATTATTTTTCTCAGTAATATTAGCTTTCAGACTTTCTATGGTGTAGTATTATGTATTTGCTACACGATTTCCGTTGCTATATAATTCTTGTTTGCTGTTGAACTCATTCTTATATTTCCTCCTTTATGTTTCCAGTTATAGGAACTGCTTTTGCATTGAATATGCTCTTCAGCATTCCTGTTTGGTGTGGAGTTCTTCTGACAGGGCTTAGTACACTATTACTTCTTGCACTGCAGCAATATGGGGTATTTCGAGATTTACTTTCTTTTTGGGATTTTACTTATCTTCCAGGAATAGAGTTCCCAAGCCTTGCATCAAATAATTCTCCTGTTTGTGCTAGTATAGTCAAGCGGATAGCATAATTTTAGAGCTGAACTTTAGCTATGCTCTCCATGACTGAGTTTCAATCCACAATGCAGATTAGAAAGCTTGAATTCTTGATTGCCTTTCTTGTGTTGACAATTGCGATTTGCTTCTTCCTGGAGCTGGGCTATGCAAAGCCGGATGTTGGAGAAATATTTTATGGGCTGTTTGTCCCTCAATTGAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCGTATGTCGTTGATATCCTTCAATAACATTCATAGACTTTCATACCTTATTCTTGTCATTATTCTAAGTCCAATTTACCTTCTGCAGACACAATCTCTTTCTTCATTCAGCACTGGTTCTCTCTAGGAAAATACCCCGTTCCCTTTCTGGCATCAAGGTGATGTTTTGTCTTCATCAATCTTAACCTTTGTTCTCCTTATTGCTTAAAAATATCCAGGTTGAGTTATAATCTATTTAATAAATAACCCAATATGTTAGTATCTGATAGGTTCACACAAGCATGCATCAGCTTTGGTTGCTGCTTCATCATTTAAATTGCAATTCTACATTCTCTCAACTAACGTTAGACACTTTTTTCAGGAAGCTTGCAGATTTTATATGATCGAGAGTGGCTTTGCTCTTATGGTGGCCTTCCTCATTAATGTGTCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATTCCCCAGATCTAAATAAGGAGGACCAAATGAGCTGCAATGACTTGGACTTGAATAAAGCTTCATTTTTATTGAGAGTATGTGTGATCTAGCAACTCTTTTCTGTATCCTTTTTGTTTACCTCGTAGGATTTTGTTCCTCGTTAAGGGTGCACCAGTTTTATTCAGAAGTTTTCTATACTTTTTTTCAGAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCTATTGCTTTGTTGGCATCGGGGCAGAGTTCTACCATAACAGGAACCTACGCAGGACAGTATGTTATGCAGGTATTGTGCTGGTCCTTTTTCATGTTAAAGATCTGCTTCTTTTCCATTTTCTGAATTCTGGCTCTCAACCATATACATTATTGGTATGGAGTAAATTGGAAATAACATGTTAGAGGTTTCATAATTTTCTAAATGCTCATGGTCATAAACCAGCTACTTGTGGGTACTTCATAATTCTTGATTTCAAGTAGCCTCTTGATACTTGTGTTTCTTGAAGTTTGCTCCTTTTTTAACACATTCGTGTTTGTAGGGGTTTCTCGATTTGAAACTGACGCCATGGGTCAGAAACTTTTTAACTCGAAGCTTAGCAATTGTTCCTAGTTTGATCGTTGCAATCATTGGTGGATCTTCTGGGGCTGGGAAGTTGATCATTATTGCGTCGGTAAGAGATATAGTTTCCATATGCTTCCAGCGAATGTAATTAAGTTTTAACTGCCAATCAGCTATGCATTGCCCATACCTCTTGTCTTTGTTCTAAGCATGCTAGTGAACAAATTCAATTAAGGTAGAAGTTAGAAAGCCGTTGTAGAACTCACTTTGAAACATGCACTGTTGTTCGTTGAAGCGGTAAAACATAACCGCTCAACAACTCTAGGATTGATTTCTTATTTCATATGCTTCAGATTGAATGTTGATCCACCGTTTTTATTCACTGGGGGCACAAGTTTCCTTGGATAGTTGAATTGTAGTGTGCTGACCAACCCTCTTAAGATTGAATGCCAAATAATTTTTTACTCCTTGCAAAATCTTGTCTTTTGGCAGATGATTTTGTCATTTGAACTCCCTTTTGCTCTAGTCCCCCTTCTGAAGTTTACAAGCAGCAAGGCCAAGATGGGACCGCATGTCAACTCTACTGCGGTAATTTCTTACAACTCTATGATACTTGACTTTTTCTCTGATAACGAAGGATAGCTATTTGGTTTTGATATTGTTTTTTTTTAAAAAAAGTTGTGCTTGTTTCCCACTTCTCTAGCATGACTCCCATCTTTTCTTAGGAAACATTTGAGTTAGCTATATTCCAAAAACAAAAACAATTTTTTAAAGATTTACCTTTTTTGTTTTATTTTACGTAATCAGCTTGTAGTTTGAAAACATTTCTTAAATCTAGATAACAAAACAAAGAAAACCATATGTAAAAGTACAGTTTAAAACTTATTTATGAAAAATCAAAAACTAAAAACCACATAGTTATCGAACATGATTAAAAAAAAATTGAATTGGACATTAGACATTGTACTCTCAATTACCCACTAGCATCATGAAGAAAATAGCACTATTATTTATTTGCTAAAGTGGTTCTTATCTTGAATAATATTCTGTAGAGTTGAATATGAAGCTTTTTGTAATTTTACCCCTACCATTATACCAAAAATGAATGGCTGAATAAGCTTACAATAAAGATCATAATATTTTATCACACTAGTCCTATTAACCAAGGAAGGTGAAAGTATTCTGCTTGAAATGCATTATCCTTTTAGTTTTTATCTCAAGGATGAACTGATGAATGCCATGAAATAGTTCTCACTCTTGAAAACTCCAAGCTGATCAACATAGTTTTCTGACATTCTTCGTTGAATATTTTTGAAATGCAGATTACAGTATTGACATGGATTATTGGATTCCTCATCATGGCTATCAATATATACTACCTCATGAGCCGTTTCATCCATGTGCTCCTTCATAACGACCTCCATCTCGCAGTGGTCATCTTCATAGGAATACTTGGATTTTCAGGCGTGGCATTATATTTAGCTGGAATTGCTTACCTAGTTTTTGAGAAAGACCAAGGAGATAAGTCATCTCTTAGCACTAACAGCAGAAGAAAGTCGAAGACTGAGCAACGAGCTGAGTAAGACATCGGGATATGATCTCCCAAACGAAGATGTAAGCATGCAGTTGCCTCAAAGAATTAGAACTACCAATGATGTAAACTGACAGATGATAATATAATTAAAAACTTGAACCCCATAGAAGGAAGGCAGATCCTTGGGTGCTGGTTTCATTTGTTTAGAAATAGAACAAACAAATGAAAATCAGAAGCACAGAAAAATGGAGAAAAAAAGAAAAAGAAAAGGGTTTAAAAAATAAGCCTAAGCCAACTCTCTCTACCCATATTTCATCCCCTACTTTCTGCCTACTTAGCCAAGCCAACTGCATTACTTTTGCAGTGTCCACTTGAGCTTTCAATTAGGGTATTAATTAGCAACAATAATTAGATACTTACCTTTTTGCCCTTCTATCCTCTCAGAAATGTCACTTTATTTTTATTATGTTTGGGTTTTAACTTTTAATTAACCTAAATAATATTGGATGGTTGCTTATTAGATAAACATTAACTGAGTTCTTTTTTCTTCTTTTGTTGAGTTCAATGATTGTCAACCTTCCACCTCCATAGTAATAGTGATGGGTTATGTCAATTACTAATAAACTGTATATGCTGTAACATTGAAG ATGCTCTTCAGCATTCCTGTTTGGTGTGGAGTTCTTCTGACAGGGCTTAGTACACTATTACTTCTTGCACTGCAGCAATATGGGCTGGGCTATGCAAAGCCGGATGTTGGAGAAATATTTTATGGGCTGTTTGTCCCTCAATTGAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTCTTTCTTCATTCAGCACTGGTTCTCTCTAGGAAAATACCCCGTTCCCTTTCTGGCATCAAGGAAGCTTGCAGATTTTATATGATCGAGAGTGGCTTTGCTCTTATGGTGGCCTTCCTCATTAATGTGTCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATTCCCCAGATCTAAATAAGGAGGACCAAATGAGCTGCAATGACTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCTATTGCTTTGTTGGCATCGGGGCAGAGTTCTACCATAACAGGAACCTACGCAGGACAGTATGTTATGCAGGGGTTTCTCGATTTGAAACTGACGCCATGGGTCAGAAACTTTTTAACTCGAAGCTTAGCAATTGTTCCTAGTTTGATCGTTGCAATCATTGGTGGATCTTCTGGGGCTGGGAAGTTGATCATTATTGCGTCGATGATTTTGTCATTTGAACTCCCTTTTGCTCTAGTCCCCCTTCTGAAGTTTACAAGCAGCAAGGCCAAGATGGGACCGCATGTCAACTCTACTGCGATTACAGTATTGACATGGATTATTGGATTCCTCATCATGGCTATCAATATATACTACCTCATGAGCCGTTTCATCCATGTGCTCCTTCATAACGACCTCCATCTCGCAGTGGTCATCTTCATAGGAATACTTGGATTTTCAGGCGTGGCATTATATTTAGCTGGAATTGCTTACCTAGTTTTTGAGAAAGACCAAGGAGATAAGTCATCTCTTAGCACTAACAGCAGAAGAAAGTCGAAGACTGAGCAACGAGCTGAGTAA MLFSIPVWCGVLLTGLSTLLLLALQQYGLGYAKPDVGEIFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSLSGIKEACRFYMIESGFALMVAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRSLAIVPSLIVAIIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSKAKMGPHVNSTAITVLTWIIGFLIMAINIYYLMSRFIHVLLHNDLHLAVVIFIGILGFSGVALYLAGIAYLVFEKDQGDKSSLSTNSRRKSKTEQRAE Homology
BLAST of Cucsat.G12375 vs. ExPASy Swiss-Prot
Match: Q9SAH8 (Metal transporter Nramp1 OS=Arabidopsis thaliana OX=3702 GN=NRAMP1 PE=1 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 7.0e-115 Identity = 216/250 (86.40%), Postives = 237/250 (94.80%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy Swiss-Prot
Match: Q9S9N8 (Metal transporter Nramp6 OS=Arabidopsis thaliana OX=3702 GN=NRAMP6 PE=2 SV=2) HSP 1 Score: 414.5 bits (1064), Expect = 9.1e-115 Identity = 216/250 (86.40%), Postives = 237/250 (94.80%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy Swiss-Prot
Match: Q653V6 (Metal transporter Nramp3 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP3 PE=2 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.6e-109 Identity = 203/250 (81.20%), Postives = 230/250 (92.00%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy Swiss-Prot
Match: Q0D7E4 (Metal transporter Nramp1 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP1 PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 4.3e-88 Identity = 164/250 (65.60%), Postives = 207/250 (82.80%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy Swiss-Prot
Match: Q8H4H5 (Metal transporter Nramp5 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 4.0e-86 Identity = 164/250 (65.60%), Postives = 205/250 (82.00%), Query Frame = 0
BLAST of Cucsat.G12375 vs. NCBI nr
Match: XP_011651819.2 (metal transporter Nramp6 [Cucumis sativus] >XP_031739044.1 metal transporter Nramp6 [Cucumis sativus] >KGN58926.2 hypothetical protein Csa_002390 [Cucumis sativus]) HSP 1 Score: 468 bits (1205), Expect = 2.75e-161 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Cucsat.G12375 vs. NCBI nr
Match: KAA0048292.1 (metal transporter Nramp6 [Cucumis melo var. makuwa] >TYK14176.1 metal transporter Nramp6 [Cucumis melo var. makuwa]) HSP 1 Score: 466 bits (1198), Expect = 3.27e-160 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. NCBI nr
Match: XP_038905496.1 (metal transporter Nramp6-like [Benincasa hispida] >XP_038905497.1 metal transporter Nramp6-like [Benincasa hispida]) HSP 1 Score: 466 bits (1198), Expect = 3.27e-160 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. NCBI nr
Match: KAA0037704.1 (metal transporter Nramp6 [Cucumis melo var. makuwa]) HSP 1 Score: 465 bits (1197), Expect = 4.63e-160 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. NCBI nr
Match: TYK27020.1 (metal transporter Nramp6 [Cucumis melo var. makuwa]) HSP 1 Score: 465 bits (1197), Expect = 1.01e-159 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy TrEMBL
Match: A0A5A7TXN6 (Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G00430 PE=3 SV=1) HSP 1 Score: 466 bits (1198), Expect = 1.58e-160 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy TrEMBL
Match: A0A0A0LD68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G714870 PE=3 SV=1) HSP 1 Score: 466 bits (1200), Expect = 2.02e-160 Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy TrEMBL
Match: A0A5A7T2K9 (Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00280 PE=3 SV=1) HSP 1 Score: 465 bits (1197), Expect = 2.24e-160 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy TrEMBL
Match: A0A5D3DUP0 (Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00300 PE=3 SV=1) HSP 1 Score: 465 bits (1197), Expect = 4.90e-160 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Cucsat.G12375 vs. ExPASy TrEMBL
Match: A0A6J1J3T2 (metal transporter Nramp6-like OS=Cucurbita maxima OX=3661 GN=LOC111481537 PE=3 SV=1) HSP 1 Score: 463 bits (1192), Expect = 1.06e-159 Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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