Cucsat.G12354 (gene) Cucumber (B10) v3

Overview
NameCucsat.G12354
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg1837: 932610 .. 933611 (+)
RNA-Seq ExpressionCucsat.G12354
SyntenyCucsat.G12354
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAATATCGGAGTGGAGCCCAACTGTGCGGTCTCTCCCACTCTTCCATCTCCATTTGCATCAGCTCCATTCTCTAAACTTCCACACCGCTTTCTCTCTCTCTCTCTCTATCTCTCCAAACTCAATCCAAAACCCCCAAATTCTACCTTCTTCAACCCTAGAAACTCCCAATTTGCTTCCGGAAAACCCTTTCTTCTCCCTTCAACCATGCTCCAATTCTTCTTCACCGTCGCTTTCTCCGCAGTTCCTCTTACTCTCTACGTTCCTCCACTCCGTAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGCGAGTCTCGAACATACACCAATCGAGTCTATCCCCGAGCTCGGCATGTTTGGTTGAGGGTTTTGGATTGTATTCTTTGCAGCACCAGGTAGATTGTTTTTCTTCTTTTTTCTTTTCAAGATTTCCCAACCCCAGGACTCTCATCTCTCTGTAAATATTCTTTTCTTTTCATAAGATTTGATTGAGTGTGGTTTGTGGTGCTGACTCCTCATACTCTTCTTGCGGGATTCCGTTGTAAATTGCTTCATGTAAAATGTAAGAGGATGTGCTTCTACTTAACTTTTAGAAATAAAATAAAATAAAATGAAGAGATGATGTTCACAAGTTAATATGTGTTAGCTGTGATGTTCGGTTTCTCTTCTTACATTTAATTTTATGTTTTCGAAATTTGTTTTGCTGAATCTTGGGAGTGAAATTGCTTCACTGTCCTGACTTAACTAGTAGTTTTGATGTTATATACTTATGTTGATTCGTTTACAGTTGATGAATTGATTGCAAATCTGAAAATGGAAGCTCCAGATTTAGATGAATTTATTAACTGTATTTTGATGCCTAAAGTCTTTCATCTAAGATTTTAGGCATCTGAATAATTGGGTTATTGGGTGCTTGTGAATCTAATTGGTGTTTATTCCACAGCAACTGCAGGATTGATTCCTATGAAGTTGATTGGATGGGAATATCAGATTGTTGGCCTAAATTCATACTTTCACTTCCATTTTTTGTCTGTTTTCTAAGGTTGTTTTCAAAATGCCAAAATTTGATAACTCAAAAATAGTTTTTAAAAGTGTATTTTTTGCTTTTCCAATTTGACTGCAAATGCAAATATTCCTTAATAATGATAAAAACTACAGTAAGAACATAGTGTAAAAACAACACGATTTTTAAAAATCAAATAGTTATAGATTTTCTGTTTTATTTTTCTTACATTGAGATTAGGTTAGTACTGAAAGAGGAAGACTACAAAAATACTAAACTTATTGAGTTTCCAGCTTGAACTAGAAGTTTAGAGGGTATTTTTTGAGCAGCCCAAGGCTTTATTACTAAGATCTTTGTTCACTAAAATCAAAATGTTACAAAATTCATGCTCCCTTCCTATACTGACTCTGTTAATTTATTGTTTAATAACTCTATATATCATCAGCCCCTTTACAACACAAAGTTTCCTTTTCTCTCTCTTTTAAGTTCAATGGAACTTTACAATACAGACTGATTTACGATTTATAGGCTAATTATCTCATACGAATTCATGTATAGATAAAATTGCTTGTTTTTGTCTGTTGGGGGATCACCTTAGAATGGTACAGTGCAAGTATTGTGTATGTTTATATATTTCATTGGTGTGGAAATGAAAATGGGAATCTGAGAATAATTTTTGATAGCATGGTTGTGTATAAGATGTTTGAGTATCTTTTATCTGATGCAAAACAAATACTATCACCATGATCGTCCTGATAGGTAACCATTTGTTATTTTGTCTTTGAAGATTAATTTTACAAGTACTATTCCCACCCTTTGTTTCTATATCCTGTTATCCACTTTCTACTCAATTTTTAAAACTAATTGTATTTTGAAAGAAACGAAAAATTGAATTTAGGTGAAATTACCATTTTTAAAATAGAAAATTGAAAACAAAATTGTTATTAAATGGATCAAAGCAAATTTATGTTTTTTAAAGTATTGGTCTATTAAATGGATATGCTCAACATTGGGATGAGTTATTGTTTGCTAGCAAACAAAACATTGGGTGGTTACCCAGAATCCATTACACTAGAAAACAAGGTGGTATAGCAATCCTTCTGGGGAATTTTGGCCCTTCCAATGTATTAAGCTGATTAAAGGCCTGCAAGAATACAGCCAAAAAAATATGTTGTTTATCCTGAAAAATGTTACAAATTTGGTCACAATAATTCAAAGTAGTCATCCAATGCCAGTTTCTGTTTCCTGAACGTTATTGTTTGATCTTGATTTTGTTTTAGTTTATTAGGGGTCCGAGGATTTGGATCATATATCTATGTATTATCCAGAAATTTTCATTTTAGTTAAAGTAAAGTTATGCCTGTTTTGACTTCAACTTTTATGTATTCGTTATGATTACATGAAAATCTCATAAATTGTCCCTAAATTGCCTAGGCAGAAGCAGTTTCAAGAATCGTTTTTGGTTTCAAGGTTCTGATTCTGAAAATG

Coding sequence (CDS)

AAAAATATCGGAGTGGAGCCCAACTGTGCGGTCTCTCCCACTCTTCCATCTCCATTTGCATCAGCTCCATTCTCTAAACTTCCACACCGCTTTCTCTCTCTCTCTCTCTATCTCTCCAAACTCAATCCAAAACCCCCAAATTCTACCTTCTTCAACCCTAGAAACTCCCAATTTGCTTCCGGAAAACCCTTTCTTCTCCCTTCAACCATGCTCCAATTCTTCTTCACCGTCGCTTTCTCCGCAGTTCCTCTTACTCTCTACGTTCCTCCACTCCGTAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGCGAGTCTCGAACATACACCAATCGAGTCTATCCCCGAGCTCGGCATGTTTGGTTGAGGGTTTTGGATTGTATTCTTTGCAGCACCAGGCAGAAGCAGTTTCAAGAATCGTTTTTGGTTTCAAGGTTCTGA

Protein sequence

KNIGVEPNCAVSPTLPSPFASAPFSKLPHRFLSLSLYLSKLNPKPPNSTFFNPRNSQFASGKPFLLPSTMLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDCILCSTRQKQFQESFLVSRF
Homology
[Close]
BLAST of Cucsat.G12354 vs. NCBI nr
Match: KAE8650936.1 (hypothetical protein Csa_001741 [Cucumis sativus])

HSP 1 Score: 134 bits (337), Expect = 4.50e-38
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 60

Query: 119 ILCSTS 124
           ILCSTS
Sbjct: 61  ILCSTS 66

[Close]
BLAST of Cucsat.G12354 vs. NCBI nr
Match: XP_011651782.1 (uncharacterized protein LOC105434940 [Cucumis sativus] >XP_016902752.1 PREDICTED: uncharacterized protein LOC107991865 [Cucumis melo])

HSP 1 Score: 132 bits (333), Expect = 1.83e-37
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 60

Query: 119 ILCST 123
           ILCST
Sbjct: 61  ILCST 65

[Close]
BLAST of Cucsat.G12354 vs. NCBI nr
Match: XP_038905300.1 (uncharacterized protein LOC120091370 [Benincasa hispida])

HSP 1 Score: 132 bits (332), Expect = 2.59e-37
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLY+PPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYIPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 60

Query: 119 ILCST 123
           ILCST
Sbjct: 61  ILCST 65

[Close]
BLAST of Cucsat.G12354 vs. NCBI nr
Match: XP_022934952.1 (uncharacterized protein LOC111441965 [Cucurbita moschata] >XP_022983303.1 uncharacterized protein LOC111481923 [Cucurbita maxima] >XP_023527102.1 uncharacterized protein LOC111790442 [Cucurbita pepo subsp. pepo] >KAG7018085.1 hypothetical protein SDJN02_19951, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130 bits (328), Expect = 1.05e-36
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVW RVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWFRVLDC 60

Query: 119 ILCST 123
           +LCST
Sbjct: 61  VLCST 65

[Close]
BLAST of Cucsat.G12354 vs. NCBI nr
Match: KAG6581581.1 (hypothetical protein SDJN03_21583, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130 bits (328), Expect = 1.56e-36
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVW RVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWFRVLDC 60

Query: 119 ILCST 123
           +LCST
Sbjct: 61  VLCST 65

[Close]
BLAST of Cucsat.G12354 vs. ExPASy TrEMBL
Match: A0A0A0LD25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697900 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 8.84e-38
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 60

Query: 119 ILCST 123
           ILCST
Sbjct: 61  ILCST 65

[Close]
BLAST of Cucsat.G12354 vs. ExPASy TrEMBL
Match: A0A1S4E3E9 (uncharacterized protein LOC107991865 OS=Cucumis melo OX=3656 GN=LOC107991865 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 8.84e-38
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 60

Query: 119 ILCST 123
           ILCST
Sbjct: 61  ILCST 65

[Close]
BLAST of Cucsat.G12354 vs. ExPASy TrEMBL
Match: A0A6J1J7E0 (uncharacterized protein LOC111481923 OS=Cucurbita maxima OX=3661 GN=LOC111481923 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 5.09e-37
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVW RVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWFRVLDC 60

Query: 119 ILCST 123
           +LCST
Sbjct: 61  VLCST 65

[Close]
BLAST of Cucsat.G12354 vs. ExPASy TrEMBL
Match: A0A6J1F484 (uncharacterized protein LOC111441965 OS=Cucurbita moschata OX=3662 GN=LOC111441965 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 5.09e-37
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVW RVLDC
Sbjct: 1   MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWFRVLDC 60

Query: 119 ILCST 123
           +LCST
Sbjct: 61  VLCST 65

[Close]
BLAST of Cucsat.G12354 vs. ExPASy TrEMBL
Match: A0A6J1DEC8 (uncharacterized protein LOC111020277 OS=Momordica charantia OX=3673 GN=LOC111020277 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 2.93e-36
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 59  MLQFFFTVAFSAVPLTLYVPPLRSFNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 118
           MLQFFFT+AFSAVPLTLYVPPLRS NLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC
Sbjct: 1   MLQFFFTLAFSAVPLTLYVPPLRSLNLFVETMEEILRESRTYTNRVYPRARHVWLRVLDC 60

Query: 119 ILCST 123
           +LCST
Sbjct: 61  VLCST 65

The following BLAST results are available for this feature:
BLAST of Cucsat.G12354 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G12354 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650936.14.50e-38100.00hypothetical protein Csa_001741 [Cucumis sativus][more]
XP_011651782.11.83e-37100.00uncharacterized protein LOC105434940 [Cucumis sativus] >XP_016902752.1 PREDICTED... [more]
XP_038905300.12.59e-3798.46uncharacterized protein LOC120091370 [Benincasa hispida][more]
XP_022934952.11.05e-3696.92uncharacterized protein LOC111441965 [Cucurbita moschata] >XP_022983303.1 unchar... [more]
KAG6581581.11.56e-3696.92hypothetical protein SDJN03_21583, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cucsat.G12354 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD258.84e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697900 PE=4 SV=1[more]
A0A1S4E3E98.84e-38100.00uncharacterized protein LOC107991865 OS=Cucumis melo OX=3656 GN=LOC107991865 PE=... [more]
A0A6J1J7E05.09e-3796.92uncharacterized protein LOC111481923 OS=Cucurbita maxima OX=3661 GN=LOC111481923... [more]
A0A6J1F4845.09e-3796.92uncharacterized protein LOC111441965 OS=Cucurbita moschata OX=3662 GN=LOC1114419... [more]
A0A6J1DEC82.93e-3695.38uncharacterized protein LOC111020277 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36616:SF4BNAC07G32700D PROTEINcoord: 70..136
NoneNo IPR availablePANTHERPTHR36616BNAC07G32700D PROTEINcoord: 70..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G12354.T1Cucsat.G12354.T1mRNA
Cucsat.G12354.T2Cucsat.G12354.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane