Cucsat.G12195 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12195
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	selT-like protein
Location	ctg1837: 1966857 .. 1970422 (-)
RNA-Seq Expression	Cucsat.G12195
Synteny	Cucsat.G12195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCCTTCATATTTTCGTTTGTTAGATTTGCGTTTCCTCCCATATACATTTCGCCTTCTTCTCTCTTGGACTTCGAATCTCATTATCGAGAGCGTTGCGTCGTTGATTCCGATGGATCGAACTCAGATGGTTCTGTTAGGGCTGCCGATCCTTTTGCTTTTTACTGATATTGTGAATCTTTTTACTCCTCCGCCTCCGAAACCTGCTGCGAATCATCCTCCACCTCGGGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCCGAATTTCCTACCGAGGTGAATGATTTCGTGTTTCATTGGATAGATTTTGATTTTTGATACTGTTTTTGTCAGAAACTAACTTAATTTGTTGTCTCGTTTTGGAATACAGAAACGGAGCGTGATCGGAGGAATTGGCCAGGGCAGCATTATTAATATCAACTTCTGTGTTTCTTGTTCGTACAGGTAGGTAGTTCATCCTTTTTATTATTAATTTTTGTGTTTATCTGTCTCATTTTTCGCTGGAAGTGAGTGAATCGTCCTGTGTTTTTTATGTTTCTTGCATCTCTCATCGACTCTGATTACGCATGAAATTGCGGTAAACTTGGAGTTAAGGAAAGCTTGATTTCCTTGTTTTGTTTTTTCTCCTTAGCACATGTTACTTGGATTGACTTAATTTTCTTGATTGAACGAACATTTCAATCTCTCTCTCTCTAATGGCTGTAGAGAGTCTCTATGACGAAAATTAGGTTGTAGTCGTAATCTTTGCTGCTGCTGTTCTTCCTTCGATTTTGTTGCTTTTGTTCTTTGTTATTTTTCCCCTACAGAGCATGTCTCTTGTTATTTTGAACTGACTTCGGTGATTGAACAAATGTTTCGGTTTCTCTGCTCTTTAGTAGCTGTTTTTAATTTTTATTCGTAGAACATTACTCTCCAGTCTCCAGACGTTGTTGAGAGTCATTATGATGAACAATCGGTCGTACTTTGGAATTTTTCTTCTTGTTGTTTCTTTTTAACTTGTTCGATTGAACGAGCCTTTTGATTTCTCTACTTTATACATATACTGGTTGCTTCGAGTCATTATGATTAAAAAATCAGTAGTACTTTGAAATCTTGACTGTTGGTCTTTTATTTCTAACTTTGATTAGCATAGATTTATTTTATTGCCGTAACATCCTCGCTGAATTAATATTAAATTTCTCCACTCTTTCGTGGTCGTTGAGACTCATTATAGGGAAAAACTTGTTGTACTTTTCTTCATCGACGCTGTTACTCGGTGAATGTGTCTTTTCTTGCTAAGACACGAGCCTTGAAAAACATAGTTTGAAAACCTCAATTCAGAAACAATCACTCAATTAGTGCATGGAAATCCGTTTTTCTATGTTAGGTTATCTTGTTTGGAGAAGATATAGAAATGGAAGTTTTACTTGACCTTCGCTGTTTGAGAATGAAGTGGACCAATAGATTATTAAGTTTCACAAGGCTAATTAGAATTGAATTTACCTCATTTTTTGTTGTTATTACACACGATAGTATAAGAAAAGATTTCACACGTGATTCCAAGTGGACCAATAGATTAAGCCAATGTTCTTCATGGAGCATATATTATACCTTCCCTTAATTGAGTCAAATAAATATCTGATTGGCACTAAGTACGAGTGTTGGTTATCATGTAAAGTCTACAGGAAGATATAGTGATATTTATCTTTCAGTCTGTTTACTTTAATATTTGATCAAGAGGTTTTTTCTCCTACAAATAGGTAACATTTAGAAGCTGTGGCATGTATTTTATCTATTTTCTGGGGTTCTCTCTTTAAAATGTAGATGATATGAACTGTAATGTTATCTCAATCTGTGGAAATGCTTGGTGTGAAATTATTTTTTACACTTATTGTGGCAGAAGCACTGCAATAACCATGAAAAATATGCTGGAGTCGTCTTTTCCTGGAGTTGAAGTTATTTTAGCCAATTATCCGCCACCACTCCCAAAGCGCCTTCTTAGTAAAGTAGTTCCTGCTGTTCAATTTGGAATTATTGGAATAATAATGGCGGGGGAACATATTTTTCCAAGGCTTGGGATGGTTCCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCGTTCTTACAAAGTTCCGGAGCCTTTGAAGTATATTGCAACGGTGAAATGGTAAGATTCTTTTGTAAGTCCACTCTGTTTTATTCTTTTTTTCTTGGTAAGATATCTGTACTGACTATCCATTTTCTGAAGGTCTTTTCTAAGTTGAAGGAGCAAAGGTTTCCCGGTGAGATTGAGTTGAGAGATCTAATTGGAAGGAAACTTTCCGGGTTGAGATTTGTTGACAATTCTGGAGGAGTTTGGTCATAGGTATGTGATTTCTTGTGATCATTGCCATCAAATTAGCAACTGTTGAAGTCTTGTAGTCTAGATAAATCTAATCCAAGTTCATAAAAGCCAAGGGAGGAGGAGCTCGTCTTTAAGAGATTTTCAATTTGAATATGCCTCTTAGTTATATACCAAACGTTACTCCCTACTACCTTTTTCTTACGAAATTGAAACCCTTAAAATTTCAACTTCATCCCACTGAAAAGGAAATTTCTAATTCTTCTGTTGGTTTCATTTCCCAGTAAATCTTTGATATCATTTTGAATGCATTTGTCCAAAATATATAAAGAAACAGTCTATTACCATGGTAGGGTAGGTTTTATGTTGGTTGTAAGAAGCAAATACAGTAAATGATCAAGAAGATGTTTGAGAAATGGTTTTGGTAGCAATATTTTTTTTTAAAAGTTGACATTTTCATTCAGAAACATTCTCTTACTAGGTATTCATAGAGTTTTTTCTTTAAGTGGGTGTTTAGGACAAGTCTAAGGAGCAATGAACTCCTAGGTCCATTGGAGTTGATAAGGAATCGATATTTTTTACTTGTGGCACCTTAAACAAACTCCACACCAACTCTTTGGACCAAACACTTTGTTATACGTTTGCACCAAATGTGACTAACCCTTGATTTTATTTTTAGATTGTTTGTTTCATAGTGACATACTTTTTTAGTTTTTTTTATGAGTTTGTTAGATCATTTTTAGGTACTTTAAATTTCTTACAACAACGTCCGTCCCTCTAGGTTTGGTGATGCATATTCTAATAAATCTCCAGCCTTTAAGAACTCCTTTGTGCTACCATCTTAATGGCTGGAGAGATTTATTAGAATATGTTTTTATCTTTATCATTCGTAGTAGGACCGTAACATTCATCTTAATCAGAAAGCGAAGTTTTGATTAGATGGTCTAATACACGTGATCATTTTTCCCCACTTGTATAGTCTAAGAGATGCATTTTGATTTTTGTCTACTAGAATTAGAAATAGTTTCAGTATTAGTGTTGGTCGATGACCATGCGGTTGGTGCAATAGGCAGAAAATTTTTTGGGCCACCCACTCAAGTTAGTGGGTCATTTTATCCCACCCATGTTTGGAGCTCTAAATTATTGTGTTATTAGAGCCCTAAAGTTATGTTTACATAACTATT

Coding sequence (CDS)

TTGCCTTCATATTTTCGTTTGTTAGATTTGCGTTTCCTCCCATATACATTTCGCCTTCTTCTCTCTTGGACTTCGAATCTCATTATCGAGAGCGTTGCGTCGTTGATTCCGATGGATCGAACTCAGATGGTTCTGTTAGGGCTGCCGATCCTTTTGCTTTTTACTGATATTGTGAATCTTTTTACTCCTCCGCCTCCGAAACCTGCTGCGAATCATCCTCCACCTCGGGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCCGAATTTCCTACCGAGAAACGGAGCGTGATCGGAGGAATTGGCCAGGGCAGCATTATTAATATCAACTTCTGTGTTTCTTGTTCGTACAGAAGCACTGCAATAACCATGAAAAATATGCTGGAGTCGTCTTTTCCTGGAGTTGAAGTTATTTTAGCCAATTATCCGCCACCACTCCCAAAGCGCCTTCTTAGTAAAGTAGTTCCTGCTGTTCAATTTGGAATTATTGGAATAATAATGGCGGGGGAACATATTTTTCCAAGGCTTGGGATGGTTCCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCGTTCTTACAAAGTTCCGGAGCCTTTGAAGTATATTGCAACGGTGAAATGGTCTTTTCTAAGTTGAAGGAGCAAAGGTTTCCCGGTGAGATTGAGTTGAGAGATCTAATTGGAAGGAAACTTTCCGGGTTGAGATTTGTTGACAATTCTGGAGGAGTTTGGTCATAG

Protein sequence

LPSYFRLLDLRFLPYTFRLLLSWTSNLIIESVASLIPMDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEKRSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS

Homology

[Close]

BLAST of Cucsat.G12195 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 4.3e-72
Identity = 135/210 (64.29%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MD+TQ++LLGLPI LL +D+ NLFTPPPPK            Q +S P I E  +FP +K
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKS-----------QHQSPPSISETLDFPAQK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
            +   G+G G+ + INFC+SCSY+ TA++MK MLES FPG++V+LANYP P PKR+L+KV
Sbjct: 61  ST---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMV-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSG 217
           VP  Q G+IG+IM GE IFP +G+  PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSG
Sbjct: 121 VPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSG 180

Query: 218 AFEVYCNGEMVFSKLKEQRFPGEIELRDLI 247
           AFEV CNGE+VFSKLKE RFPGEIELRDLI
Sbjct: 181 AFEVSCNGELVFSKLKEGRFPGEIELRDLI 196

[Close]

BLAST of Cucsat.G12195 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.6e-20
Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 110 ININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPAVQFGIIGII 169
           +  +FCVSC YR        +L   +PG+++   NYPP + + + ++V+  V+  +I  +
Sbjct: 83  VKFSFCVSCGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCV 142

Query: 170 MAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 229
           ++G   FP LG+  P ++  + +NR  +    +LF N I+  LQS+GAFE+Y   E ++S
Sbjct: 143 VSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWS 202

Query: 230 KLKEQRFPGEIELRDLIGRKLS 252
           KL+  R P   EL   I   L+
Sbjct: 203 KLESGRVPSPPELFQAIDSHLA 224

[Close]

BLAST of Cucsat.G12195 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-15
Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 0


Query: 110 ININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPAVQFGIIGII 169
           + I +CVSC Y+          +  +PG+ +   N+ P   K  L+++V   + G+I I+
Sbjct: 72  LTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIV 131

Query: 170 MAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 229
           + G + F  +G   P    +   NRF      ++ GN  +S L S+GAFE++   + ++S
Sbjct: 132 ITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWS 191

Query: 230 KLKEQRFPGEIELRDLIGRKLSGLR 255
           K+ ++R P + E  +LI  +L  +R
Sbjct: 192 KISKERVPTQEEFLNLIDLQLKTIR 216

[Close]

BLAST of Cucsat.G12195 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.2e-14
Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 96  EKRSVIGGIGQGSIININF--CVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRL 155
           EK   +   GQ     + F  C SC YR        +L   +P ++V   NY PP     
Sbjct: 28  EKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGEKYPQIQVNGGNYDPPGLNYY 87

Query: 156 LSKVVPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 215
           LSK++ A++  II  +++    F  LG+  P W+  ++AN+  +    +  GN +++ L 
Sbjct: 88  LSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQANKIYACMMIFFLGNMLEAQLI 147

Query: 216 SSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKL 251
           SSGAFE+  N   V+SKL+  RFP    L  +I   L
Sbjct: 148 SSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDNHL 184

[Close]

BLAST of Cucsat.G12195 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-14
Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 0


Query: 110 ININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPAVQFGIIGII 169
           + I +CVSC Y+          +  +P + +  AN+ P L K  +++ +  V+  ++ ++
Sbjct: 87  LRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVLV 146

Query: 170 MAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 229
           + G + F R G+  P        N+  S    ++ GN ++  L S+GAFEVY   E ++S
Sbjct: 147 LGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWS 206

Query: 230 KLKEQRFPGEIELRDLIGRKLSGL 254
           K++  R P   E   LI  +L+ L
Sbjct: 207 KIESGRVPSPQEFMQLIDAQLAVL 230

[Close]

BLAST of Cucsat.G12195 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus])

HSP 1 Score: 459 bits (1182), Expect = 1.51e-162
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. NCBI nr
Match: XP_008442408.1 (PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precursor [Cucumis melo subsp. melo] >ADN34273.1 selenoprotein t [Cucumis melo subsp. melo] >KAA0044178.1 selT-like protein [Cucumis melo var. makuwa] >TYK24955.1 selT-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 437 bits (1124), Expect = 1.05e-153
Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRT++VLLGLPI LLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYR TAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFGIIGII+AGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSG RFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida])

HSP 1 Score: 434 bits (1117), Expect = 1.22e-152
Identity = 213/227 (93.83%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKPA NHPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAVNHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYR TAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAIAMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFGIIG IMAGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRK+SG RFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKVSGSRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430 bits (1106), Expect = 5.58e-151
Identity = 212/227 (93.39%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKP  NHPPPRVHYQPKSQPVIQEP EFPTEK
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPV-NHPPPRVHYQPKSQPVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RS IGGIGQGS+ININFCVSCS+R TAI MKNMLESSFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSGIGGIGQGSVININFCVSCSFRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFG+IGII AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDN+GGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNAGGVWS 226

[Close]

BLAST of Cucsat.G12195 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima])

HSP 1 Score: 422 bits (1086), Expect = 6.22e-148
Identity = 209/227 (92.07%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKP  NHPPPRVHYQPKSQPVIQEP EFPTEK
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPV-NHPPPRVHYQPKSQPVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RS IG IGQGS+ININFCVSCS+R TAI MKNMLE SFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSGIGEIGQGSVININFCVSCSFRGTAINMKNMLELSFPGVEVILANYPPPLPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFG+IGII AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSG RFVDN+GGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNAGGVWS 226

[Close]

BLAST of Cucsat.G12195 vs. ExPASy TrEMBL
Match: A0A0A0LCS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 7.32e-163
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 437 bits (1124), Expect = 5.06e-154
Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRT++VLLGLPI LLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYR TAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFGIIGII+AGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSG RFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. ExPASy TrEMBL
Match: A0A5D3DMW2 (SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00710 PE=4 SV=1)

HSP 1 Score: 437 bits (1124), Expect = 5.06e-154
Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRT++VLLGLPI LLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYR TAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFGIIGII+AGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSG RFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. ExPASy TrEMBL
Match: A0A1S3B6A1 (selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1)

HSP 1 Score: 437 bits (1124), Expect = 5.06e-154
Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRT++VLLGLPI LLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RSVIGGIGQGS+ININFCVSCSYR TAI MKNMLESSFPGVEVILANYPPP PKRLLSKV
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFGIIGII+AGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSG RFVDNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

[Close]

BLAST of Cucsat.G12195 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1)

HSP 1 Score: 430 bits (1106), Expect = 2.70e-151
Identity = 212/227 (93.39%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 38  MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 97
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKP  NHPPPRVHYQPKSQPVIQEP EFPTEK
Sbjct: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPV-NHPPPRVHYQPKSQPVIQEPLEFPTEK 60

Query: 98  RSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 157
           RS IGGIGQGS+ININFCVSCS+R TAI MKNMLESSFPGVEVILANYPPPLPKRLLSKV
Sbjct: 61  RSGIGGIGQGSVININFCVSCSFRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 158 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 217
           VP VQFG+IGII AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 218 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 264
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDN+GGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNAGGVWS 226

The following BLAST results are available for this feature:

BLAST of Cucsat.G12195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STZ2	4.3e-72	64.29	SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2	[more]
Q9BN19	8.6e-20	33.10	Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=510...	[more]
Q19892	1.7e-15	28.28	Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis el...	[more]
Q9VMV6	3.2e-14	31.85	Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanoga...	[more]
Q9U3N5	5.4e-14	27.78	Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis el...	[more]

BLAST of Cucsat.G12195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137713.1	1.51e-162	99.56	selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 ...	[more]
XP_008442408.1	1.05e-153	94.27	PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precurso...	[more]
XP_038903844.1	1.22e-152	93.83	selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Beninca...	[more]
XP_022935564.1	5.58e-151	93.39	selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurb...	[more]
XP_022983567.1	6.22e-148	92.07	selT-like protein [Cucurbita maxima]	[more]

BLAST of Cucsat.G12195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS3	7.32e-163	99.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1	[more]
E5GBE6	5.06e-154	94.27	Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DMW2	5.06e-154	94.27	SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B6A1	5.06e-154	94.27	selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1	[more]
A0A6J1F5S6	2.70e-151	93.39	selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011893	Selenoprotein, Rdx-type	PFAM	PF10262	Rdx	coord: 110..246 e-value: 1.7E-15 score: 56.9
IPR011893	Selenoprotein, Rdx-type	TIGRFAM	TIGR02174	TIGR02174	coord: 110..247 e-value: 1.9E-23 score: 80.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 194..252 e-value: 7.6E-9 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..90
None	No IPR available	PANTHER	PTHR13544:SF12	SELT-LIKE PROTEIN	coord: 38..258
IPR019389	Selenoprotein T	PANTHER	PTHR13544	SELENOPROTEIN T	coord: 38..258
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 109..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12195.T1	Cucsat.G12195.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0098869	cellular oxidant detoxification
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0004791	thioredoxin-disulfide reductase activity