Cucsat.G12125 (gene) Cucumber (B10) v3

Overview
NameCucsat.G12125
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionWD-40 repeat family protein / notchless protein, putative
Locationctg1837: 744463 .. 751162 (-)
RNA-Seq ExpressionCucsat.G12125
SyntenyCucsat.G12125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTAAGTTATATATGGTTATTGTTGTGAAGGTTTAATCAGCCCATTGTACTTTTCTTCAGGTCATGCTGAAGCTGTTCTTTCTGTTTCTTTTAGCCCTGATGGACGCCAGTTGGCAAGTGGTTCAGGTGACACTACAGTTCGACTATGGGACCTTAATACGCAAACACCGTTGTTCACCTGTACAGGTAAGAAACACATCTATGCAGCTAAGTTGTTAGCCTGATATTGAAGCTTTTGAATATACTATATCAAAACTTAATTTTATTATTAATTTTATTCAATGCAAATCTTCCTTCAAGGTATATGATGTATATATGTATATATTTGTCATTCCTAGAGGGTAAAAGATGTCTACTTTGTATCATAGTGGTTCATATGTGGATTTTTGTTATGGCACTGCCCTTGGTTTGAAAAATGCCATATTTTTGTTTTTGTTCTTTTTTGTGTGTTTTCTTTTTCTTTTTCTTTTCATTTTTGAACTAGTTTGCTTTGCCATTTATTAATATCCATAGTTTCTACACATCAAGCTGTAGTCAGGAAGTTTTTCCTTTCTCCCAGGGCATAAAAATTGGGTTCTTTCTATTGCTTGGTCTCCTGATGGGAAGCATCTTGTAAGCGGGAGCAAAGCTGGGGAACTTTTTTGCTGGGATCCGCTGACGGGGAAGCCATTGGGCAATCCACTCACTGTAAAGACTTTTCCCATAATTTACTGTACTTTTGAAATGTTTGTTAAGTTTGATGACTATTTTGCCCAACCGAGAGTCAAACCAGACAAACCAAAATCCGATTTCTAAGTTTTATAGTTGTATGGTGTGCTATTTTGTTCAAGAGTATTTTTGTTCTGGAATTTGATATATTTTTTCTATATTTCACCAGTGGATTTCAAGTTATAAAGAAAGATCGTGGAAATAATTCCATTGCATTGCCCAACTTTTATTTATTGATGTATTTCTGTGCAGCTAAGAAATTTTCTATTTTCTTCTTTGTTTGACCATTGGCTAGCATGTCCATGTCTGACACTTGAACGCTCCAACACTTATTAGCACAATGGATATCCTAAATTTGTTAATCACATATCAAACACTTGACTTTGAATAAATTTTGAGAGTTAAATGCCTGAAAATCATTTTTAAACATATAAATGTATTGAACCTATTGACTTTGAAGTTTATTTTGTATAAAAATGATATTTATTTTAAAGAATGTATATTATAATAAATGTTTCCTTGTATTGATCGTGTCCTAGGTTTTTTACATATGAATTGTCAAAAATTCGTGCTTGTACTCATGGCGGTGTGTCATATTTATGTTTTATATCCATGTCCGTGCTTCTTAACTTTGCAAGGTTTCAAACTGTTCCAATATTATTGTTTGAAGTCACTTCAACCTTTTATTCTTTGAGTAAACTTGTTTGTGCAACCCTAGGTACCCAGTTACTTTCAAGTTTTCTGTCTGGAGTTAAAAATTATGTCATATTGAAGCATCTATGTCTTGAAGCAATAAACTCTGGGGGCATGTTCATAGATTGTATAGTAGGAGCAGTAGTTTTCAACTGCATGCTTTTATTATTGTATGAATATTTAATCGTATTCATGTTTCCACTCTTTAAATGTTCTAATGGTTGTAGGGCATGTTTACACCGTGGTTAGAATCAAACTTTGGTGGCCACCTATCTGGAATAAAATCCTACATGTTTTCTTGACAACAAAATATTGTAGAGTATGGTGGTTGTCCTATGAGATTAGCCCAAGGGTGAGCAGGATTAGGCACTTGTAGATATCAAAAAATTTGTAGGACACTAAGTTTCAAATTTTCAACTCATTGTTGCTTTTTGTCTTTTCTATTCATATTGTTAGATGCTGTTGGTTGTTAGTTAGCAAAACAATTTATATAAGCTCTATGGTAAACAGTGCTTAGAAGTTTGATTATAGTTGGAATGGTATACACTGTAAATGTTGAAATGCTTGAGCCACAGGAATTTTTTTTGTAACTAAAACCTCCTCATAATTTAATGATCATTATTGATTGGAAGGGCATTCTTCTGTAGTTCTTTGGGGAGGGTTGTGTACTAGAGACTCTTAGTTTGTTCTCCTTTTTGTTAATAGACTATTACTCCGTTTCTTTTCCTACAACCAGAAGAGATTGGTTCTATTTTCTTATTGACAAGGAAAAACCTAAAATCATGGTGGCATTTTTCATCACTCTTTGATGCCTAAACGATGATTAAATATAAATTATTTTTATATTTATAGGTTTATTGGGGTGAAATAATTAATTATGTTTGAAACTCATGTTATAGGGCCACAAGAAATGGATTACTGGTATTTCATGGGAGCCTTTGCATTTAAGTGCTCCATGCCGTCGCTTTGTGAGTTCTAGCAAGGATGGTGATGCACGCATATGGGATGTTTCTTTGAAAAAGTGTGTTATATGTCTCAGTGGTCATACTCTTGCAATAACCTGCGTCAAATGGGGTGGAGATGGAGTTATATACACAGGGTATGCTGATGTTCCTTTTTTTCATTTTTTCTCAATGGAAGTGGTTGTTTCTATAGAAAAAAGGGTATGCTGATGTTCCTTATTTCTCTATGTTACTTAAGAAAATAAAATGAAAAATGAAGTGAGAAAGTGAGAGGGAGGAGCCACTATGGAAGCATTCTAGCATTCTTGATGCCATTGAGTTTGAACATCTACGTATAGTGTACTTGAGCCTGATCTACCTTCTTACATCTGATAGCAAACAAAATCACTTCACACCTGTGCATGCTTAGAGTCAGTTTGATAACTGACCATGGACTAAATTTGTACTACTAAAGGCTAAAATGTCTGCTTCTTTCAGTCTGTAGAAATGCTAACTTTTGGTACCATTCATTGCCTATGCAGTCAGCAATTGAGCTACAGTTAATTTTTCTGAAGACTGATCGCATTTCCAACTTTTCTTGTATTCTGAAATCAAAATGTTTTTTCTCAAATGCCCCAGTTCTCAGGATTGTACTATTAAGGTTTGGGAAACTAAGCAAGGAAAACTAATACGTGAATTGAAGGTATGCTGCATAACACTTTCTGTACTATGAACTTTTTAAATTATTATTTATTATTATTCTGGGTTAAAATACGTTAGGAGTTATTCAATCCTTTTGGGATCATCTTTGTGAGTTTCTGAAGGGCTATTTTGTTGCTTTACGAGTCAAAAAATCTAACAGTTGCGATACAGAGTTCACTTTTATTTATTATAAAGAAAAATGAAAAAAATTGTATTTATTATTTAGTGATAAGCCCTCTCAATTTTTAACATTTTCCAAACGATGTTTGAGAATTTGATTTGGACCTATTTTGTTTTTCATAATGAGTAGTTCAGTTCCTCATACTGCACCTTTTTTTCTATCTGGTATTGTGACAGGGACATGGTCATTGGGTTAACTCTCTTGCACTAAGCACTGAATATGTTCTCCGCACAGGAGCTTTTGATCATACAGGGAAACAGTTCTCTTCCCCAGAGGAAATGAAGAAGGTAAGATGATTTGGAGTGTTCTGATTCTTCTTAGTGTCCTTTCTCATACTAAACGAAACAATTTTGTATAAACACAATTTTATGCAAATGATGGTTTTTTTTTTTTACATGGAAATGAAAACTTTTGTGAAGCCTTTTGAGAGGGTGTGAGTGTGAGTGAGGTGTGGTCCAGCATTAGGTTCAATATATTTGTAATTATCCATTAGGTCTTATTTTGTTGGATTGGAAGCCGTTTTTGTAGGCTGTCTCCCTTTCTTGTGGGCTCTCCTTATGCGTATGCATGTGTCATTTTTCATTTCTTCTCATTGAAACTTCAGCTGTTCATAACACATATGTATAGAATCAGATTATTAGTGCAATCTTTTAAATTTATTCTTAAAAATTTTCAGGACCAAAAACTCTGGGGCCAAATATACATGTTATTCAAAACTCTATTTCTCAAACAGGGTCTTAGTTTTCATTTTTTTAAAAAAATAAAAATTGACTACAGTTTCAAAAGTACTTTCAGGAAGTGGAAAAACATGCATACAAAGTTGTTCTTCGTCCTATCAACAAAAGGCATACACACATGATTTTTAAGAAACTGAACTAAACAAATTAGTTATTCTTTTTAAAAAAATTTAAAAACCAAAATAGTCACTAAATGGAGTCATTGGTTTCTAATCAGTTAACTATCTATTTCATTTTGCACTTTCTTCTTCCATGATTCGCAGGTTGCTTTAGAAAGGTATAATAAGATGAAAGGCAGTGCTCCGGAAAGATTGGTTTCAGGATCTGATGATTTTACTATGTTTCTATGGGAACCTGCAGTTAGCAAGCAACCTAAGATACGTATGACAGGCCATCAACAGGTATATTTCTTTGTAAATGTTTTTCTTCCTGGAATATCATGCATCACACATGAATTGTGGCATTCCATAGTCATCCTGCTTCTTATCAACTGCATTTTCACCATGTTACCATGTTTCTAGTCTTTTGTGAACTAGATGCCACAAGAACTCTTCATAAACATTACCATTTGGACATGGTCATTTGTCCTAGTTCTTATTTCTAATGGGTGAAATGGAGTAGCCGAAACAATTTTTTGTAGTGACACCTGTCAGCATTCTCTCTATCAAACTAGATCGGAAGGTCTTCTTGTAATTTTTGTATCAGGGAGGGGATTCCTTGCCCCCTTTTCCTTTAGGTTCTCTGAATTTTTTGGAGGAATAAAGTTCTGCTGATCTTTTCTTGTAAAGAAAAAGGAAAAGAAAAGAAAAAGAATAAGGGTATGATGTATTTTTTTGGGACTGTTCATTTGATCGACTAGTCAAGATGAAATTTTTTGTACACCTCCCATCATTGATTTGCTTGAATCCTTAGCTAAGTTTGTCAAATTGTAAAGTCTCTACCGTTGAAGGAAAGAAAGCTACGGGAAAAGTTTTGAAGTGAAAATAATTGACTTTAAGTCATATCATTAGCATACTTTCCTATCGAAATAATATCCCAAGCATACTCGAATTAACATGTTCATTAGATGTTTATCCATGTAAGTCAAACGGATATGCTTGTATGAGTATGCAATTTAAAAAGTTTGTGCATTGAGCCTTTTTGGAGTTCTCATTCATAAGTGAAGCATAAACTTCTTGCGTACTTTCAGCTTGTGAATCATGTTTATTTCTCACCCGATGGACAATGGGTGGCCAGTGCATCCTTTGATAAGTCTGTGAAACTGTGGAATGGCATTACCGGAAAATTTGTTGCTGCTTTTCGGGGTCACGTAGGACCTGTTTATCAAATCAGGTTTGTTTCATTTAATTTCTGTGCTTCAATTAACCATTCAATTTACTGAATTTATTTATTGTTTTCCCCTTGCAGTTGGTCTGCTGATAGTAGGCTTCTTTTGAGCGGCAGCAAAGACTCCACCCTGAAGGTATTTTGGATGTATATGTTTGCCCTAATCCGTCTAGTGTTTCCTAAAATGAATGCATTGAGTTGAGTTGGTGCGTGATGCATGTTCTGTTTAGATGCAAATGCAAACTGTAAATGAATCAAATGGTTGAAGTTGTATCTCTATCCTCTAGGGACTGGTGGTTTTACAAGTGCACTGGAGATTTACTGTTTTTTTTACAGTTGTCTGCGTGTTTTGTGGAATTTTTCCATACTATTTTAGGCTAAAAGTTGATTTCTATGGTTTGCGTTTTGTGTCTCAAGGAGTTTGCTCCGTACTACTTTAGGCTAAATGTTGATTTCTATTTGTCTAGATTTGGGATATCAGAACACACAAGTTGAAAGAGGATCTTCCAGGCCATGCGGATGAGGTATGGTTCCATCATATTGTTAGACACATCGTGGTTCCCCTTAATGCATTCCTCTCATCACCATATTCTAAAGTTAGGTCTTGATTTTGTGCAGGTTTTTGCTGTTGATTGGAGTCCTGATGGTGAGAAGGTGGCTTCTGGTGGAAAGGATAAAGTATTAAAGCTATGGATGGGCTAGGGGATAGCTGAGGGTGCTAATTCAATTGTAATTGTGGAAGTCGGTAAAAATATGTCACTGAATGTATGCGTCACAATCATACTGCCAAAGGATATAGGTGTTGAATGATATAAAGGCAAGCAAAAGGGATGTGGATGGAAAGCAGAACCGGCATACAGGTTGGGTTTTGCACTAACATTTTGGTTCTGCTGTGGCTGCTGATCTTGAGCAGGATTTGGGGCTGGGTCTCGACCATTATTATTGGCTCACTCTCTTCTTTGCACGACTGCTGCAGAGTGCAGAAACTGGAGAATATGCAGTACATGACATGATATCCTAATCTTTGTCTTGGCTGGTTTGTCATATTCTACAAGTTTGTGTTGTGTTAACATATCCACCAGTATTTGTAATTTTCTTTTTCCATTGCATATTATGTCCTTTTGACTAGTAATGGAATAGATGCCAATTTATACAATAAATTGTTAGCTGTCACCATTTGGGATGTAGATTTTTATTCTCTGCAAATGGTATTTTTTGAACGATGAAGCTACTGAAATTTGTATTACTGCAACCCGAATCAGTTAATGTTAGTTGAGTTTTGTTGAGGAACCATGTTGCTTTCTGAGGTTGTTAATCCTAACTAAGAACAATTTTATTATTTGGAATGTTACATACAGTTGCTGGAAAATATTTTGATTTAGAGCCTCCTTTAGAACTAGATCTTGTTT

Coding sequence (CDS)

ATGAAGAAGGTTGCTTTAGAAAGGTATAATAAGATGAAAGGCAGTGCTCCGGAAAGATTGGTTTCAGGATCTGATGATTTTACTATGTTTCTATGGGAACCTGCAGTTAGCAAGCAACCTAAGATACGTATGACAGGCCATCAACAGCTTGTGAATCATGTTTATTTCTCACCCGATGGACAATGGGTGGCCAGTGCATCCTTTGATAAGTCTGTGAAACTGTGGAATGGCATTACCGGAAAATTTGTTGCTGCTTTTCGGGGTCACGTAGGACCTGTTTATCAAATCAGTTGGTCTGCTGATAGTAGGCTTCTTTTGAGCGGCAGCAAAGACTCCACCCTGAAGATTTGGGATATCAGAACACACAAGTTGAAAGAGGATCTTCCAGGCCATGCGGATGAGGTTTTTGCTGTTGATTGGAGTCCTGATGGTGAGAAGGTGGCTTCTGGTGGAAAGGATAAAGTATTAAAGCTATGGATGGGCTAG

Protein sequence

MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIRTHKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Homology
[Close]
BLAST of Cucsat.G12125 vs. ExPASy Swiss-Prot
Match: Q9FLX9 (Notchless protein homolog OS=Arabidopsis thaliana OX=3702 GN=NLE1 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.8e-82
Identity = 139/160 (86.88%), Postives = 151/160 (94.38%), Query Frame = 0 

Query: 2   KKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDGQ 61
           K+ ALERYNK KG +PERLVSGSDDFTMFLWEP+VSKQPK R+TGHQQLVNHVYFSPDG+
Sbjct: 314 KQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGK 373

Query: 62  WVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIRT 121
           W+ASASFDKSV+LWNGITG+FV  FRGHVGPVYQ+SWSADSRLLLSGSKDSTLKIW+IRT
Sbjct: 374 WIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRT 433

Query: 122 HKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 162
            KLK+DLPGHADEVFAVDWSPDGEKV SGGKD+VLKLW G
Sbjct: 434 KKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWKG 473

[Close]
BLAST of Cucsat.G12125 vs. ExPASy Swiss-Prot
Match: Q5RFF8 (Notchless protein homolog 1 OS=Pongo abelii OX=9601 GN=NLE1 PE=2 SV=3)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-65
Identity = 112/159 (70.44%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           +K+ AL RYN M+G  PERLVSGSDDFT+FLW PA  K+P  RMTGHQ L+N V FSPD 
Sbjct: 325 LKERALSRYNLMRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDS 384

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           + VASASFDKS+KLW+G TGK++A+ RGHV  VYQI+WSADSRLL+SGS DSTLK+WD++
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLW 160
             KL  DLPGHADEV+AVDWSPDG++VASGGKDK L++W
Sbjct: 445 AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483

[Close]
BLAST of Cucsat.G12125 vs. ExPASy Swiss-Prot
Match: Q58D20 (Notchless protein homolog 1 OS=Bos taurus OX=9913 GN=NLE1 PE=2 SV=3)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-65
Identity = 110/159 (69.18%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           +K+ AL RYN ++G  PERLVSGSDDFT+FLW PA  K+P  RMTGHQ L+N V FSPD 
Sbjct: 326 LKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDS 385

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           + +ASASFDKS+KLW+G TGK++A+ RGHV  VYQI+WSADSRLL+SGS DSTLK+WD++
Sbjct: 386 RVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 445

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLW 160
             KL  DLPGHADEV+AVDWSPDG++VASGGKDK L++W
Sbjct: 446 AQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484

[Close]
BLAST of Cucsat.G12125 vs. ExPASy Swiss-Prot
Match: Q9NVX2 (Notchless protein homolog 1 OS=Homo sapiens OX=9606 GN=NLE1 PE=1 SV=4)

HSP 1 Score: 249.2 bits (635), Expect = 3.1e-65
Identity = 111/159 (69.81%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           +K+ AL RYN ++G  PERLVSGSDDFT+FLW PA  K+P  RMTGHQ L+N V FSPD 
Sbjct: 325 LKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDS 384

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           + VASASFDKS+KLW+G TGK++A+ RGHV  VYQI+WSADSRLL+SGS DSTLK+WD++
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLW 160
             KL  DLPGHADEV+AVDWSPDG++VASGGKDK L++W
Sbjct: 445 AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483

[Close]
BLAST of Cucsat.G12125 vs. ExPASy Swiss-Prot
Match: Q8VEJ4 (Notchless protein homolog 1 OS=Mus musculus OX=10090 GN=Nle1 PE=1 SV=4)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-64
Identity = 110/159 (69.18%), Postives = 133/159 (83.65%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           +K+ A  RYN ++G  PERLVSGSDDFT+FLW PA  K+P  RMTGHQ L+N V FSPD 
Sbjct: 325 LKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDS 384

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           + VASASFDKS+KLW+G TGK++A+ RGHV  VYQI+WSADSRLL+SGS DSTLK+WD++
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLW 160
             KL  DLPGHADEV+AVDWSPDG++VASGGKDK L++W
Sbjct: 445 AQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483

[Close]
BLAST of Cucsat.G12125 vs. NCBI nr
Match: KAA0048388.1 (notchless protein-like protein [Cucumis melo var. makuwa] >TYJ99865.1 notchless protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 335 bits (858), Expect = 6.53e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG
Sbjct: 279 MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 338

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 339 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 398

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 399 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 439

[Close]
BLAST of Cucsat.G12125 vs. NCBI nr
Match: XP_004149723.1 (notchless protein homolog [Cucumis sativus] >XP_008461819.1 PREDICTED: notchless protein homolog [Cucumis melo] >KAE8650926.1 hypothetical protein Csa_002095 [Cucumis sativus])

HSP 1 Score: 335 bits (858), Expect = 2.17e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG
Sbjct: 318 MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 377

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 378 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 437

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 438 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 478

[Close]
BLAST of Cucsat.G12125 vs. NCBI nr
Match: XP_038905776.1 (notchless protein homolog [Benincasa hispida])

HSP 1 Score: 332 bits (850), Expect = 3.52e-110
Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKG+APERLVSGSDDFTMFLWEPAVSKQPK RMTGHQQLVNHVYFSPDG
Sbjct: 318 MKKVALERYNKMKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 377

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 378 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 437

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 438 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 478

[Close]
BLAST of Cucsat.G12125 vs. NCBI nr
Match: XP_022152686.1 (notchless protein homolog [Momordica charantia])

HSP 1 Score: 330 bits (845), Expect = 2.01e-109
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKG+APERLVSGSDDFTMFLWEPAVSK PK RMTGHQQLVNHVYFSPDG
Sbjct: 318 MKKVALERYNKMKGNAPERLVSGSDDFTMFLWEPAVSKHPKTRMTGHQQLVNHVYFSPDG 377

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 378 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 437

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 438 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 478

[Close]
BLAST of Cucsat.G12125 vs. NCBI nr
Match: PSS24449.1 (Notchless protein, partial [Actinidia chinensis var. chinensis])

HSP 1 Score: 318 bits (814), Expect = 2.58e-109
Identity = 150/158 (94.94%), Postives = 155/158 (98.10%), Query Frame = 0 

Query: 4   VALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDGQWV 63
           VALERYNKMKGSAPERLVSGSDDFTMFLWEPAV+K PK RMTGHQQLVNHVYFSPDGQWV
Sbjct: 1   VALERYNKMKGSAPERLVSGSDDFTMFLWEPAVNKHPKTRMTGHQQLVNHVYFSPDGQWV 60

Query: 64  ASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIRTHK 123
           ASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLK+WDIRT K
Sbjct: 61  ASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 120

Query: 124 LKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           LK+DLPGHADEVFAVDWSPDGEKVASGG+D+VLKLWMG
Sbjct: 121 LKQDLPGHADEVFAVDWSPDGEKVASGGRDRVLKLWMG 158

[Close]
BLAST of Cucsat.G12125 vs. ExPASy TrEMBL
Match: A0A5D3BNJ4 (Notchless protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00070 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 3.16e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG
Sbjct: 279 MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 338

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 339 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 398

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 399 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 439

[Close]
BLAST of Cucsat.G12125 vs. ExPASy TrEMBL
Match: A0A1S3CGX2 (notchless protein homolog OS=Cucumis melo OX=3656 GN=LOC103500329 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 1.05e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG
Sbjct: 318 MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 377

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 378 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 437

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 438 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 478

[Close]
BLAST of Cucsat.G12125 vs. ExPASy TrEMBL
Match: A0A0A0LET9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G687770 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 3.67e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG
Sbjct: 441 MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 500

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 501 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 560

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 561 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 601

[Close]
BLAST of Cucsat.G12125 vs. ExPASy TrEMBL
Match: A0A6J1DIH2 (notchless protein homolog OS=Momordica charantia OX=3673 GN=LOC111020346 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 9.72e-110
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0 

Query: 1   MKKVALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDG 60
           MKKVALERYNKMKG+APERLVSGSDDFTMFLWEPAVSK PK RMTGHQQLVNHVYFSPDG
Sbjct: 318 MKKVALERYNKMKGNAPERLVSGSDDFTMFLWEPAVSKHPKTRMTGHQQLVNHVYFSPDG 377

Query: 61  QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 120
           QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR
Sbjct: 378 QWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIR 437

Query: 121 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG
Sbjct: 438 THKLKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 478

[Close]
BLAST of Cucsat.G12125 vs. ExPASy TrEMBL
Match: A0A2R6RA60 (Notchless protein (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09290 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.25e-109
Identity = 150/158 (94.94%), Postives = 155/158 (98.10%), Query Frame = 0 

Query: 4   VALERYNKMKGSAPERLVSGSDDFTMFLWEPAVSKQPKIRMTGHQQLVNHVYFSPDGQWV 63
           VALERYNKMKGSAPERLVSGSDDFTMFLWEPAV+K PK RMTGHQQLVNHVYFSPDGQWV
Sbjct: 1   VALERYNKMKGSAPERLVSGSDDFTMFLWEPAVNKHPKTRMTGHQQLVNHVYFSPDGQWV 60

Query: 64  ASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIRTHK 123
           ASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLK+WDIRT K
Sbjct: 61  ASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 120

Query: 124 LKEDLPGHADEVFAVDWSPDGEKVASGGKDKVLKLWMG 161
           LK+DLPGHADEVFAVDWSPDGEKVASGG+D+VLKLWMG
Sbjct: 121 LKQDLPGHADEVFAVDWSPDGEKVASGGRDRVLKLWMG 158

The following BLAST results are available for this feature:
BLAST of Cucsat.G12125 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLX94.8e-8286.88Notchless protein homolog OS=Arabidopsis thaliana OX=3702 GN=NLE1 PE=2 SV=1[more]
Q5RFF81.1e-6570.44Notchless protein homolog 1 OS=Pongo abelii OX=9601 GN=NLE1 PE=2 SV=3[more]
Q58D202.4e-6569.18Notchless protein homolog 1 OS=Bos taurus OX=9913 GN=NLE1 PE=2 SV=3[more]
Q9NVX23.1e-6569.81Notchless protein homolog 1 OS=Homo sapiens OX=9606 GN=NLE1 PE=1 SV=4[more]
Q8VEJ41.2e-6469.18Notchless protein homolog 1 OS=Mus musculus OX=10090 GN=Nle1 PE=1 SV=4[more]
BLAST of Cucsat.G12125 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048388.16.53e-112100.00notchless protein-like protein [Cucumis melo var. makuwa] >TYJ99865.1 notchless ... [more]
XP_004149723.12.17e-111100.00notchless protein homolog [Cucumis sativus] >XP_008461819.1 PREDICTED: notchless... [more]
XP_038905776.13.52e-11098.76notchless protein homolog [Benincasa hispida][more]
XP_022152686.12.01e-10998.14notchless protein homolog [Momordica charantia][more]
PSS24449.12.58e-10994.94Notchless protein, partial [Actinidia chinensis var. chinensis][more]
BLAST of Cucsat.G12125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BNJ43.16e-112100.00Notchless protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3CGX21.05e-111100.00notchless protein homolog OS=Cucumis melo OX=3656 GN=LOC103500329 PE=4 SV=1[more]
A0A0A0LET93.67e-110100.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G... [more]
A0A6J1DIH29.72e-11098.14notchless protein homolog OS=Momordica charantia OX=3673 GN=LOC111020346 PE=4 SV... [more]
A0A2R6RA601.25e-10994.94Notchless protein (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 20..34
score: 36.55
coord: 105..119
score: 40.9
coord: 63..77
score: 36.93
IPR001632G-protein, beta subunitPRINTSPR00319GPROTEINBcoord: 86..102
score: 37.25
coord: 105..119
score: 43.43
coord: 142..159
score: 37.71
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 121..160
e-value: 2.3E-8
score: 43.8
coord: 79..118
e-value: 5.2E-11
score: 52.6
coord: 37..76
e-value: 3.0E-9
score: 46.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 128..159
e-value: 3.2E-7
score: 30.9
coord: 43..76
e-value: 3.3E-9
score: 37.2
coord: 81..118
e-value: 4.9E-9
score: 36.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 44..85
score: 14.685726
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 86..127
score: 16.991583
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 128..161
score: 15.086744
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..160
e-value: 4.9E-54
score: 185.8
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 6..161
NoneNo IPR availablePANTHERPTHR19848:SF0NOTCHLESS HOMOLOG 1 (DROSOPHILA)coord: 6..161
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 86..121
score: 13.659216
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 44..76
score: 12.051043
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 128..161
score: 13.764669
NoneNo IPR availableCDDcd00200WD40coord: 18..159
e-value: 2.78707E-45
score: 148.252
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 105..119
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 18..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G12125.T9Cucsat.G12125.T9mRNA
Cucsat.G12125.T8Cucsat.G12125.T8mRNA
Cucsat.G12125.T4Cucsat.G12125.T4mRNA
Cucsat.G12125.T1Cucsat.G12125.T1mRNA
Cucsat.G12125.T10Cucsat.G12125.T10mRNA
Cucsat.G12125.T3Cucsat.G12125.T3mRNA
Cucsat.G12125.T2Cucsat.G12125.T2mRNA
Cucsat.G12125.T12Cucsat.G12125.T12mRNA
Cucsat.G12125.T5Cucsat.G12125.T5mRNA
Cucsat.G12125.T7Cucsat.G12125.T7mRNA
Cucsat.G12125.T6Cucsat.G12125.T6mRNA
Cucsat.G12125.T11Cucsat.G12125.T11mRNA
Cucsat.G12125.T13Cucsat.G12125.T13mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000027 ribosomal large subunit assembly
cellular_component GO:0005730 nucleolus
molecular_function GO:0005515 protein binding