Cucsat.G12011 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12011
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat-containing protein
Location	ctg1820: 4896398 .. 4898602 (-)
RNA-Seq Expression	Cucsat.G12011
Synteny	Cucsat.G12011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAGAGTGGCCAATTGAAATATTATATAATACATAACAACGTTTAGTAGTCGGCGCTGCCGGACCGGAATGTTTGTAAAGGTCGGTCCTTTACAAATGTTCAAACAATGCATTCCTCTATCGTTGCTAAGCCCTTTTCACGTTTGTGTTTCCCTATTTTGATTTCCTCTCTTTCTGCTTTCAACTCCCCCACTACTACATTCTTCAATCCCTGTTCTTCTCAAGGTCTCTGCTACCTTGCCCACCAACTGTTCGATGAATTGCCTCAAACAGATATTCCTTCCCTTAATTCCCTTCTCACCTCCTATGTGCGTGGCTGTCGTCAATCTGACGCATGGTCTCTCTTCAGTCGAATGCACCGCTCCTTCTCTCCTCTCACTGCCCACACTCTCACCGCTGTCTTGGCTGCATGCTCCGCATTACCCACCTCCCAATATGGCCAACTAGTCCATGGGTTAATCATAAAAACAGGTGCGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGACTTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAAATGAGGGACGTGGTTGCTTGGAATTCGTTGTTATCTAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCATTAAACGTGTTTGAAGAAATGAAGAGAGAGAAAGTGGAGTTTAGTGAGTTTACTTTGTGTTCTGTGCTTAAAGCTTGTGCTGCCTTGGAAGATTATCGTTTGGGTAAGCAAGTTCATGGGGTGGTTGTAGTGATGAACAGAGATATGCTTGTTTTGGGTACCGCCTTGGTTGATTTTTACTCTAGTGTTGGGTGTATTAGTGAAGCCGTGAAAGTTTACACTAGCTTAAATTGTAGAAAGGATGATATCATACTTAATTCTTTAATTTCTGGATGTGTTAGGAATAAAAGATATGAAGAGGCTTTTTCATTGATGAGCAAGATGAGACCTAATGCAATTGCACTAACAAGTGCCCTGCATGCTTGCTCTGAGAATTCAGATCTATGGATAGGGAAGCAAATTCACTGTGTTTCGGTTCGTCATGGTTTGACATCTAATACTCAATTGTGCAATATCTTGCTCGATATGTATGCTAAATGTGGGAAAGTTTTGAATGCTCGAGCAGTGTTCGATGGAATGTGTCATAAGAATGTAGTATCGTGGAGCAGCATGATTCAAACATACGGAAGTCATGGAGATGGGCTAAAAGCTTTTGAACTGTTCAAGATAATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTGACGTTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGTTGGTGCAGCAGGGACAAGAATGTTTTTATTTGGCGAAGGAGAAGTATAGCTCATGTCTAGGTCCAGAACACTATGCCTGCTTCATAGATGTATTAGGCCGAGCTGGTAAGATTGATGAAGTATGGAGTCTGTTTCATGATATGGAGATGTGTGGTGTTAAGATTACTTCAAAAATATGGGCAGCAGTACTTAATGCTTGTAATCACAACCAAGATGTTTCCAGGGGTGAGTTTGCTGCCAAAAAACTCCTTCAATTGGATCCGAACAAGGCAGGGAATTACGTGCTGGCATCAAATTTCTATGCGTCAATAGGAAAGTGGGATTCGGTGGATGAATTGAGGAGACTCATGAAAGCAAAAGGACTAAGGAAGCTGGAAAAAGCTCAGTCACTTCTTCTTGCTTCTAGTGCTGGATGAGAGAATTAGCTCATCTATAATGTGATAGCCAAAAGAAAGAGGGGCTTCTGATGTGGAAAAAGAAGAAACACCTTATCGTGGACTGAAGCATCAGGTTAAATGTCACTCATTGTTGATCAAGACTCTGCCTAAGGGCTCTAATTTAAACCTCAACGTTCCTTCAACGACTGTCATTTAAGATGTCAACAAACGTGTTCTGTGGCTGAAGCCTGAAGATCAGCAAATTTTGTAGCTTGCTATTTTTCTGGTATGTAAACTGCCTCAAATTGAATGTTTCTGAATATCTTGTTAAATTTTTTCCAATTTATTCTTATTATGTTATTGGGTGAGGACCAAAGTCGTGACCAAAATCAAATCGGGTAGGACTTGTAAAGAAACTTTGCTTGATGTTATTGTAGGTGTAAATTATTTTGTAGTGATATGAGACAAGTATCATCAACGCTAAAGTGGGGATGTGTAGTA

Coding sequence (CDS)

ATGCATTCCTCTATCGTTGCTAAGCCCTTTTCACGTTTGTGTTTCCCTATTTTGATTTCCTCTCTTTCTGCTTTCAACTCCCCCACTACTACATTCTTCAATCCCTGTTCTTCTCAAGGTCTCTGCTACCTTGCCCACCAACTGTTCGATGAATTGCCTCAAACAGATATTCCTTCCCTTAATTCCCTTCTCACCTCCTATGTGCGTGGCTGTCGTCAATCTGACGCATGGTCTCTCTTCAGTCGAATGCACCGCTCCTTCTCTCCTCTCACTGCCCACACTCTCACCGCTGTCTTGGCTGCATGCTCCGCATTACCCACCTCCCAATATGGCCAACTAGTCCATGGGTTAATCATAAAAACAGGTGCGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGACTTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAAATGAGGGACGTGGTTGCTTGGAATTCGTTGTTATCTAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCATTAAACGTGTTTGAAGAAATGAAGAGAGAGAAAGTGGAGTTTAGTGAGTTTACTTTGTGTTCTGTGCTTAAAGCTTGTGCTGCCTTGGAAGATTATCGTTTGGGTAAGCAAGTTCATGGGGTGGTTGTAGTGATGAACAGAGATATGCTTGTTTTGGGTACCGCCTTGGTTGATTTTTACTCTAGTGTTGGGTGTATTAGTGAAGCCGTGAAAGTTTACACTAGCTTAAATTGTAGAAAGGATGATATCATACTTAATTCTTTAATTTCTGGATGTGTTAGGAATAAAAGATATGAAGAGGCTTTTTCATTGATGAGCAAGATGAGACCTAATGCAATTGCACTAACAAGTGCCCTGCATGCTTGCTCTGAGAATTCAGATCTATGGATAGGGAAGCAAATTCACTGTGTTTCGGTTCGTCATGGTTTGACATCTAATACTCAATTGTGCAATATCTTGCTCGATATGTATGCTAAATGTGGGAAAGTTTTGAATGCTCGAGCAGTGTTCGATGGAATGTGTCATAAGAATGTAGTATCGTGGAGCAGCATGATTCAAACATACGGAAGTCATGGAGATGGGCTAAAAGCTTTTGAACTGTTCAAGATAATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTGACGTTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGTTGGTGCAGCAGGGACAAGAATGTTTTTATTTGGCGAAGGAGAAGTATAGCTCATGTCTAGGTCCAGAACACTATGCCTGCTTCATAGATGTATTAGGCCGAGCTGGTAAGATTGATGAAGTATGGAGTCTGTTTCATGATATGGAGATGTGTGGTGTTAAGATTACTTCAAAAATATGGGCAGCAGTACTTAATGCTTGTAATCACAACCAAGATGTTTCCAGGGGTGAGTTTGCTGCCAAAAAACTCCTTCAATTGGATCCGAACAAGGCAGGGAATTACGTGCTGGCATCAAATTTCTATGCGTCAATAGGAAAGTGGGATTCGGTGGATGAATTGAGGAGACTCATGAAAGCAAAAGGACTAAGGAAGCTGGAAAAAGCTCAGTCACTTCTTCTTGCTTCTAGTGCTGGATGA

Protein sequence

MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLASSAG

Homology

[Close]

BLAST of Cucsat.G12011 vs. ExPASy Swiss-Prot
Match: Q9FJY9 (Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E38 PE=2 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 9.0e-157
Identity = 272/488 (55.74%), Postives = 363/488 (74.39%), Query Frame = 0


Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A  LFDELPQ D+ SLNS L+S++R    +D  +LF ++HR+   L++HT T VL ACS 
Sbjct: 37  ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSL 164
           L   + G+ VH L+IK GA +G ++KTA++DMYSK G L DSV+VFE +E +D+V+WN+L
Sbjct: 97  LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156

Query: 165 LSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNR 224
           LS FLR G  +EAL VF  M RE+VE SEFTL SV+K CA+L+  + GKQVH +VVV  R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216

Query: 225 DMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSK 284
           D++VLGTA++ FYSSVG I+EA+KVY SLN   D+++LNSLISGC+RN+ Y+EAF LMS+
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276

Query: 285 MRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNAR 344
            RPN   L+S+L  CS+NSDLWIGKQIHCV++R+G  S+++LCN L+DMY KCG+++ AR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336

Query: 345 AVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGH 404
            +F  +  K+VVSW+SMI  Y  +GDG+KA E+F+ M E  +GVLPNSVTFL V+SAC H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396

Query: 405 SGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHD-MEMCGVKITS 464
           +GLV++G+ECF + KEKY    G EHY CFID+L +AG+ +E+W L    ME     I  
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456

Query: 465 KIWAAVLNACNHNQDVSRGEFAAKKLL-QLDPNKAGNYVLASNFYASIGKWDSVDELRRL 524
            IW AVL+AC+ N D++RGE+ A++L+ +  P  A  YVL SNFYA++GKWD V+ELR  
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516

Query: 525 MKAKGLRK 531
           +K KGL K
Sbjct: 517 LKNKGLVK 524

[Close]

BLAST of Cucsat.G12011 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-85
Identity = 183/529 (34.59%), Postives = 298/529 (56.33%), Query Frame = 0


Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A  LF  +P+ D  + NS+++ + +  R  +A   F+ MH+    L  ++  +VL+ACS 
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSG 164

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSL 164
           L     G  VH LI K+   S +   +A++DMYSKCG ++D+ +VF+EM  R+VV+WNSL
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSL 224

Query: 165 LSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMN- 224
           ++ F + G A EAL+VF+ M   +VE  E TL SV+ ACA+L   ++G++VHG VV  + 
Sbjct: 225 ITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284

Query: 225 -RDMLVLGTALVDFYSSVGCISEAVKVYTSLNCR-------------------------- 284
            R+ ++L  A VD Y+    I EA  ++ S+  R                          
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344

Query: 285 ----KDDIILNSLISGCVRNKRYEEAFSLMSKMR-----PNAIALTSALHACSENSDLWI 344
               ++ +  N+LI+G  +N   EEA SL   ++     P   +  + L AC++ ++L +
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404

Query: 345 GKQIHCVSVRHGL------TSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSM 404
           G Q H   ++HG         +  + N L+DMY KCG V     VF  M  ++ VSW++M
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464

Query: 405 IQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEK 464
           I  +  +G G +A ELF+ M+E  +G  P+ +T + VLSACGH+G V++G+  F      
Sbjct: 465 IIGFAQNGYGNEALELFREMLE--SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 524

Query: 465 YSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSR 524
           +      +HY C +D+LGRAG ++E  S+  +M M   +  S IW ++L AC  +++++ 
Sbjct: 525 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM---QPDSVIWGSLLAACKVHRNITL 584

Query: 525 GEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRK 531
           G++ A+KLL+++P+ +G YVL SN YA +GKW+ V  +R+ M+ +G+ K
Sbjct: 585 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628

[Close]

BLAST of Cucsat.G12011 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.8e-81
Identity = 172/492 (34.96%), Postives = 281/492 (57.11%), Query Frame = 0


Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A ++FD +P+ D+ S N+++  Y +      A  +   M       +  T+ +VL A SA
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSL 164
           L     G+ +HG  +++G  S +   TA++DMY+KCG L+ + ++F+ M  R+VV+WNS+
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 165 LSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNR 224
           + ++++    +EA+ +F++M  E V+ ++ ++   L ACA L D   G+ +H + V +  
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 225 DMLV-LGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMS 284
           D  V +  +L+  Y     +  A  ++  L  R   +  N++I G  +N R  +A +  S
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYFS 428

Query: 285 KMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCG 344
           +MR     P+     S + A +E S     K IH V +R  L  N  +   L+DMYAKCG
Sbjct: 429 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 488

Query: 345 KVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSV 404
            ++ AR +FD M  ++V +W++MI  YG+HG G  A ELF+ M +G   + PN VTFLSV
Sbjct: 489 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLSV 548

Query: 405 LSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCG 464
           +SAC HSGLV+ G +CFY+ KE YS  L  +HY   +D+LGRAG+++E W     M    
Sbjct: 549 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP--- 608

Query: 465 VKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDE 524
           VK    ++ A+L AC  +++V+  E AA++L +L+P+  G +VL +N Y +   W+ V +
Sbjct: 609 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 668

Query: 525 LRRLMKAKGLRK 531
           +R  M  +GLRK
Sbjct: 669 VRVSMLRQGLRK 674

[Close]

BLAST of Cucsat.G12011 vs. ExPASy Swiss-Prot
Match: Q9FLZ9 (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.4e-80
Identity = 167/501 (33.33%), Postives = 272/501 (54.29%), Query Frame = 0


Query: 40  GLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVL 99
           G   +A  +FD +   D+ S N++++ Y R    +DA  +F  M      L   T+ ++L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225

Query: 100 AACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVV 159
             C  L   + G+ VH L+ +      I  K A+++MY KCG +D++  VF+ ME RDV+
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285

Query: 160 AWNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVV 219
            W  +++ +  +G  E AL +   M+ E V  +  T+ S++  C        GK +HG  
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345

Query: 220 VVMN-RDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEA 279
           V       +++ T+L+  Y+    +    +V++  + +      +++I+GCV+N+   +A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDA 405

Query: 280 FSLMSKMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDM 339
             L  +MR     PN   L S L A +  +DL     IHC   + G  S+      L+ +
Sbjct: 406 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 465

Query: 340 YAKCGKVLNARAVFDGMCH----KNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVL 399
           Y+KCG + +A  +F+G+      K+VV W ++I  YG HGDG  A ++F  MV  R+GV 
Sbjct: 466 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV--RSGVT 525

Query: 400 PNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWS 459
           PN +TF S L+AC HSGLV++G   F    E Y +     HY C +D+LGRAG++DE ++
Sbjct: 526 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 585

Query: 460 LFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYAS 519
           L   +     + TS +W A+L AC  +++V  GE AA KL +L+P   GNYVL +N YA+
Sbjct: 586 LITTIPF---EPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 645

Query: 520 IGKWDSVDELRRLMKAKGLRK 531
           +G+W  ++++R +M+  GLRK
Sbjct: 646 LGRWKDMEKVRSMMENVGLRK 660

[Close]

BLAST of Cucsat.G12011 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.0e-80
Identity = 179/539 (33.21%), Postives = 285/539 (52.88%), Query Frame = 0


Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAH-TLTAVLAACS 104
           A ++FDE+   D+ S NS++ SY +  +   A  +FSRM   F     + TL  VL  C+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 105 ALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNS 164
           +L T   G+ +H   + +     +     ++DMY+KCG++D++  VF  M ++DVV+WN+
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300

Query: 165 LLSSFLREGLAEEALNVFEEMKREKVEF-------------------------------- 224
           +++ + + G  E+A+ +FE+M+ EK++                                 
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360

Query: 225 ---SEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLG--------TALVDFYSSV 284
              +E TL SVL  CA++     GK++H   +    D+   G          L+D Y+  
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420

Query: 285 GCISEAVKVYTSLNCRKDDIIL-NSLISGCVRNKRYEEAFSLMSKM-------RPNAIAL 344
             +  A  ++ SL+ ++ D++    +I G  ++    +A  L+S+M       RPNA  +
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480

Query: 345 TSALHACSENSDLWIGKQIHCVSVRHGLTS-NTQLCNILLDMYAKCGKVLNARAVFDGMC 404
           + AL AC+  + L IGKQIH  ++R+   +    + N L+DMYAKCG + +AR VFD M 
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540

Query: 405 HKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQG 464
            KN V+W+S++  YG HG G +A  +F  M   R G   + VT L VL AC HSG++ QG
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEM--RRIGFKLDGVTLLVVLYACSHSGMIDQG 600

Query: 465 QECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLN 524
            E F   K  +    GPEHYAC +D+LGRAG+++    L  +M M   +    +W A L+
Sbjct: 601 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM---EPPPVVWVAFLS 660

Query: 525 ACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRK 531
            C  +  V  GE+AA+K+ +L  N  G+Y L SN YA+ G+W  V  +R LM+ KG++K
Sbjct: 661 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKK 714

[Close]

BLAST of Cucsat.G12011 vs. NCBI nr
Match: XP_004146551.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis sativus] >KGN53295.1 hypothetical protein Csa_014387 [Cucumis sativus])

HSP 1 Score: 1092 bits (2825), Expect = 0.0
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0


Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL
Sbjct: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK
Sbjct: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
           TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV
Sbjct: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180

Query: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA
Sbjct: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540

Query: 541 SSAG 544
           SSAG
Sbjct: 541 SSAG 544

[Close]

BLAST of Cucsat.G12011 vs. NCBI nr
Match: XP_008452095.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_008452096.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_008452097.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_008452099.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_016901139.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_016901140.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >TYK16676.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1030 bits (2663), Expect = 0.0
Identity = 510/544 (93.75%), Postives = 528/544 (97.06%), Query Frame = 0


Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           M SS VAKPFSRLCFPILISSLSAFNSPTT+F NPCSSQGLCYLAH LFDE PQTDIPSL
Sbjct: 1   MISSFVAKPFSRLCFPILISSLSAFNSPTTSF-NPCSSQGLCYLAHHLFDEFPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           N  LTSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIK
Sbjct: 61  NCRLTSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
           TGAY GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV
Sbjct: 121 TGAYPGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180

Query: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           F EMKREK+EFSEFTLCSVLKACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 FVEMKREKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVT 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLA
Sbjct: 481 RGEFAAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLA 540

Query: 541 SSAG 544
           SSAG
Sbjct: 541 SSAG 543

[Close]

BLAST of Cucsat.G12011 vs. NCBI nr
Match: KAA0044788.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 506/540 (93.70%), Postives = 524/540 (97.04%), Query Frame = 0


Query: 5   IVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNSLL 64
           I A PFSRLCFPILISSLSAFNSPTT+F NPCSSQGLCYLAH LFDE PQTDIPSLN  L
Sbjct: 430 IQALPFSRLCFPILISSLSAFNSPTTSF-NPCSSQGLCYLAHHLFDEFPQTDIPSLNCRL 489

Query: 65  TSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTGAY 124
           TSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIKTGAY
Sbjct: 490 TSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIKTGAY 549

Query: 125 SGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEM 184
            GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVF EM
Sbjct: 550 PGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFVEM 609

Query: 185 KREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCIS 244
           KREK+EFSEFTLCSVLKACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCIS
Sbjct: 610 KREKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCIS 669

Query: 245 EAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSENSD 304
           EA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACSENSD
Sbjct: 670 EAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACSENSD 729

Query: 305 LWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQT 364
           LWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSSMIQT
Sbjct: 730 LWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSSMIQT 789

Query: 365 YGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 424
           YGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS
Sbjct: 790 YGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 849

Query: 425 CLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEF 484
           CLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+RGEF
Sbjct: 850 CLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVTRGEF 909

Query: 485 AAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLASSAG 544
           AA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLASSAG
Sbjct: 910 AAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLASSAG 968

[Close]

BLAST of Cucsat.G12011 vs. NCBI nr
Match: XP_038901893.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Benincasa hispida])

HSP 1 Score: 914 bits (2361), Expect = 0.0
Identity = 455/525 (86.67%), Postives = 486/525 (92.57%), Query Frame = 0


Query: 6   VAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNSLLT 65
           V+ PFSRLC PI ISS SA NS  T+F +PC S+GLC LA QLFDELPQ DIPSLNSLL 
Sbjct: 41  VSNPFSRLCLPISISSRSALNSHPTSF-HPCYSEGLCSLARQLFDELPQRDIPSLNSLLI 100

Query: 66  SYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTGAYS 125
           S+VRG R SDAWSLF RMHRS S LTAHTLTA LAACSALPTS YGQ VHGLIIK+  YS
Sbjct: 101 SFVRGYRHSDAWSLFCRMHRS-SALTAHTLTAALAACSALPTSGYGQQVHGLIIKSDTYS 160

Query: 126 GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEMK 185
           GI+TKTAILDMYSKCGLLDDSVKVFEEME+RDVVAWN+LLSSFLREGLAEEALNVFEEMK
Sbjct: 161 GIITKTAILDMYSKCGLLDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEEALNVFEEMK 220

Query: 186 REKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISE 245
           REKV FSEFTLCSVLKACAAL+D+RLGKQVHGVVVVM+RD+LVLGTALVDFYSSVGCISE
Sbjct: 221 REKVVFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDILVLGTALVDFYSSVGCISE 280

Query: 246 AVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSENSDL 305
           A+KVYTSLNCRKDDI+LNSLISGCV+NK+YEEAFSLMSKMRPNAIALTSAL ACSENSDL
Sbjct: 281 AMKVYTSLNCRKDDIMLNSLISGCVKNKKYEEAFSLMSKMRPNAIALTSALAACSENSDL 340

Query: 306 WIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQTY 365
           W G+QIHCV VRHG  SNT LCNILLDMYAKCGK+LNA+ VFDGMCHK+VVSWSSMIQ Y
Sbjct: 341 WRGRQIHCVLVRHGFASNTLLCNILLDMYAKCGKILNAQTVFDGMCHKDVVSWSSMIQAY 400

Query: 366 GSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSC 425
           GSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQE FYLAKEK+SS 
Sbjct: 401 GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQESFYLAKEKFSSY 460

Query: 426 LGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFA 485
           LGPEHYAC ID+LGRAGKIDEVWS F+DMEMCGVKITSK+WAAVLNAC+HNQDVSRGEFA
Sbjct: 461 LGPEHYACIIDILGRAGKIDEVWSTFNDMEMCGVKITSKVWAAVLNACSHNQDVSRGEFA 520

Query: 486 AKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRK 530
           AKKLLQ+D  KAGNYVLASNFYASIGKWDSVDE+RR+M+AKGL K
Sbjct: 521 AKKLLQMDSKKAGNYVLASNFYASIGKWDSVDEMRRIMRAKGLTK 563

[Close]

BLAST of Cucsat.G12011 vs. NCBI nr
Match: KAG7015318.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 908 bits (2346), Expect = 0.0
Identity = 451/541 (83.36%), Postives = 491/541 (90.76%), Query Frame = 0


Query: 1    MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
            + S  V  PFSR C PILI SLS+ NS TT+F NPC S   C LAHQLFD+LPQ DIPSL
Sbjct: 479  IKSLYVTNPFSRFCLPILIPSLSSLNSATTSF-NPCCSDSFCSLAHQLFDKLPQRDIPSL 538

Query: 61   NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
             S+LTSYVRG R SDAWSLF +MHRS SP+TAHTLTA LAACSALPTS YGQ VHGLIIK
Sbjct: 539  TSILTSYVRGHRHSDAWSLFRQMHRSCSPVTAHTLTAALAACSALPTSDYGQQVHGLIIK 598

Query: 121  TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
            TG YSGIVTKTAILDMYSKCGLLD SVKVFEEME++DVVAWN+LLSSFLREGLA EALNV
Sbjct: 599  TGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNALLSSFLREGLAGEALNV 658

Query: 181  FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
            FEEMKREKVE SEFTLCSVLKACAAL+D++LGKQVHG+VVVM+RDMLVLGTALVDFYSSV
Sbjct: 659  FEEMKREKVECSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTALVDFYSSV 718

Query: 241  GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
            GCISEA+KVYTSL+C KDDI+LNSLISGC  NK+YEEAFSLMSKMRPNAIALTSAL ACS
Sbjct: 719  GCISEAMKVYTSLDCIKDDIMLNSLISGCFVNKKYEEAFSLMSKMRPNAIALTSALAACS 778

Query: 301  ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
            ENSDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGK+LNAR VFD M H++VVSWSS
Sbjct: 779  ENSDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKILNARIVFDEMRHRDVVSWSS 838

Query: 361  MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
            MIQ YGSHGDGLKAFELFK+M++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFYLAKE
Sbjct: 839  MIQAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFYLAKE 898

Query: 421  KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
            +YSS L PEHYACFID+LGRAGKI+EVWS+FHDMEMCGVKITSK+WAA+LNAC+HNQDVS
Sbjct: 899  RYSSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHNQDVS 958

Query: 481  RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
            RGEFAAK+LL+LDPNKAGN+VLASNFYASIGKWDSVDELRR+M  KGL K E   SL+ +
Sbjct: 959  RGEFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVDELRRIMWEKGLSK-EAGNSLVSS 1017

[Close]

BLAST of Cucsat.G12011 vs. ExPASy TrEMBL
Match: A0A0A0KUI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046580 PE=4 SV=1)

HSP 1 Score: 1092 bits (2825), Expect = 0.0
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0


Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL
Sbjct: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK
Sbjct: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
           TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV
Sbjct: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180

Query: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA
Sbjct: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540

Query: 541 SSAG 544
           SSAG
Sbjct: 541 SSAG 544

[Close]

BLAST of Cucsat.G12011 vs. ExPASy TrEMBL
Match: A0A1S3BTV7 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493206 PE=4 SV=1)

HSP 1 Score: 1030 bits (2663), Expect = 0.0
Identity = 510/544 (93.75%), Postives = 528/544 (97.06%), Query Frame = 0


Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           M SS VAKPFSRLCFPILISSLSAFNSPTT+F NPCSSQGLCYLAH LFDE PQTDIPSL
Sbjct: 1   MISSFVAKPFSRLCFPILISSLSAFNSPTTSF-NPCSSQGLCYLAHHLFDEFPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           N  LTSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIK
Sbjct: 61  NCRLTSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
           TGAY GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV
Sbjct: 121 TGAYPGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180

Query: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           F EMKREK+EFSEFTLCSVLKACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 FVEMKREKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVT 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLA
Sbjct: 481 RGEFAAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLA 540

Query: 541 SSAG 544
           SSAG
Sbjct: 541 SSAG 543

[Close]

BLAST of Cucsat.G12011 vs. ExPASy TrEMBL
Match: A0A5D3D1V2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005070 PE=4 SV=1)

HSP 1 Score: 1030 bits (2663), Expect = 0.0
Identity = 510/544 (93.75%), Postives = 528/544 (97.06%), Query Frame = 0


Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           M SS VAKPFSRLCFPILISSLSAFNSPTT+F NPCSSQGLCYLAH LFDE PQTDIPSL
Sbjct: 1   MISSFVAKPFSRLCFPILISSLSAFNSPTTSF-NPCSSQGLCYLAHHLFDEFPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           N  LTSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIK
Sbjct: 61  NCRLTSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
           TGAY GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV
Sbjct: 121 TGAYPGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180

Query: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           F EMKREK+EFSEFTLCSVLKACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 FVEMKREKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVT 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLA
Sbjct: 481 RGEFAAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLA 540

Query: 541 SSAG 544
           SSAG
Sbjct: 541 SSAG 543

[Close]

BLAST of Cucsat.G12011 vs. ExPASy TrEMBL
Match: A0A5A7TPH0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00790 PE=3 SV=1)

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 506/540 (93.70%), Postives = 524/540 (97.04%), Query Frame = 0


Query: 5   IVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNSLL 64
           I A PFSRLCFPILISSLSAFNSPTT+F NPCSSQGLCYLAH LFDE PQTDIPSLN  L
Sbjct: 430 IQALPFSRLCFPILISSLSAFNSPTTSF-NPCSSQGLCYLAHHLFDEFPQTDIPSLNCRL 489

Query: 65  TSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTGAY 124
           TSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIKTGAY
Sbjct: 490 TSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIKTGAY 549

Query: 125 SGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEM 184
            GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVF EM
Sbjct: 550 PGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFVEM 609

Query: 185 KREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCIS 244
           KREK+EFSEFTLCSVLKACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCIS
Sbjct: 610 KREKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCIS 669

Query: 245 EAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSENSD 304
           EA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACSENSD
Sbjct: 670 EAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACSENSD 729

Query: 305 LWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQT 364
           LWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSSMIQT
Sbjct: 730 LWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSSMIQT 789

Query: 365 YGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 424
           YGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS
Sbjct: 790 YGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 849

Query: 425 CLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEF 484
           CLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+RGEF
Sbjct: 850 CLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVTRGEF 909

Query: 485 AAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLASSAG 544
           AA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLASSAG
Sbjct: 910 AAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLASSAG 968

[Close]

BLAST of Cucsat.G12011 vs. ExPASy TrEMBL
Match: A0A6J1JAF9 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482726 PE=4 SV=1)

HSP 1 Score: 905 bits (2339), Expect = 0.0
Identity = 449/541 (82.99%), Postives = 490/541 (90.57%), Query Frame = 0


Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           + S  V  PFSR C PI I S SA NS TT+F NPC S+  C  AHQLFDELPQ DIPSL
Sbjct: 6   VKSLYVTNPFSRFCLPISIPSFSALNSATTSF-NPCCSESFCSHAHQLFDELPQRDIPSL 65

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
            SLLTSYVRG R SDAWSLF +MHRS SPLTAHTLTA LAACSALPTS YGQ VHGLIIK
Sbjct: 66  TSLLTSYVRGHRHSDAWSLFRQMHRSCSPLTAHTLTAALAACSALPTSDYGQQVHGLIIK 125

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNV 180
           TG YSGIVTKTAILDMYSKCGLLD SVKVFEEME++DVVAWN+LLSSFLREGLA +ALNV
Sbjct: 126 TGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNALLSSFLREGLAGKALNV 185

Query: 181 FEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           FEEMKREKVE+SEFTLCSVLKACAAL+D++LGKQVHG+VVVM+RDMLVLGT+LVDFYSSV
Sbjct: 186 FEEMKREKVEYSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTSLVDFYSSV 245

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEA+KVYTSLNC KDDI+LNSLISGCV NK+YEEAFSLMSKMRPNAIALTSAL ACS
Sbjct: 246 GCISEAMKVYTSLNCTKDDIMLNSLISGCVVNKKYEEAFSLMSKMRPNAIALTSALAACS 305

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHC  VRHG+ SNTQLCN LLDMYAKCGK+ NAR VFD M H++VVSWSS
Sbjct: 306 ENSDLWIGKQIHCALVRHGMASNTQLCNTLLDMYAKCGKISNARIVFDEMRHRDVVSWSS 365

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQ YGSHGDGLKAFELFK+MV+G+TGVLPNSVTFLSVLSACGHSGLV+QGQECFYLAKE
Sbjct: 366 MIQAYGSHGDGLKAFELFKMMVDGKTGVLPNSVTFLSVLSACGHSGLVEQGQECFYLAKE 425

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           +YSS LGPEHYACFID+LGRAGKI+EVWS+FHDMEMCGVKITSK+WAA+LNAC+HNQDVS
Sbjct: 426 RYSSYLGPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHNQDVS 485

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAAK+LL+L+PNKAGN+VLASNFYASIGKW+SVDELRR+M  KGL K E   SL+ +
Sbjct: 486 RGEFAAKRLLRLEPNKAGNFVLASNFYASIGKWNSVDELRRIMWEKGLSK-EAGNSLVSS 544

The following BLAST results are available for this feature:

BLAST of Cucsat.G12011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJY9	9.0e-157	55.74	Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidop...	[more]
Q9SIT7	1.1e-85	34.59	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q3E6Q1	2.8e-81	34.96	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9FLZ9	2.4e-80	33.33	Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX...	[more]
Q9LFL5	4.0e-80	33.21	Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cucsat.G12011 vs. NCBI nr


Match Name	Identity	Description
XP_004146551.1	100.00	pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis sa...	[more]
XP_008452095.1	93.75	PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial ...	[more]
KAA0044788.1	93.70	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_038901893.1	86.67	pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Benincasa ...	[more]
KAG7015318.1	83.36	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]

BLAST of Cucsat.G12011 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KUI3	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046580 PE=4 SV=1	[more]
A0A1S3BTV7	93.75	pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Cucumis ...	[more]
A0A5D3D1V2	93.75	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7TPH0	93.70	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1JAF9	82.99	pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 146..176 e-value: 5.0E-4 score: 18.1 coord: 176..207 e-value: 1.6E-7 score: 29.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 173..221 e-value: 1.1E-13 score: 51.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 12.156139
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 75..237 e-value: 1.9E-31 score: 111.6
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 54..229
None	No IPR available	PANTHER	PTHR47925:SF41	SUBFAMILY NOT NAMED	coord: 54..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12011.T1	Cucsat.G12011.T1	mRNA
Cucsat.G12011.T2	Cucsat.G12011.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding