Cucsat.G11872 (gene) Cucumber (B10) v3

Overview
NameCucsat.G11872
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionProtein CURVATURE THYLAKOID 1D
Locationctg1820: 2053735 .. 2056319 (-)
RNA-Seq ExpressionCucsat.G11872
SyntenyCucsat.G11872
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAGTAATAGGGGAAGTCTACGAGAGCAATCTAGAATGAGACGACGCTATATATATGGTTATCGTCGTTTCCTCAACCCTCAACCCTCAACCCTCAACCCTACCCTCCAATGTTATAAGAAACACTCATTTCACCCTCATCGCCTTCGCCCATTTCATTTTTAATTTCAACCACTGTTTCGCCCATTCCCCTCTCCCGCCATGGCCATCGACCTCTCTGCTTCCCCACCCCTTTTCTCTACTCTTCTCACCGGAAACCCCTACCTTCGCCCCAGGCCCGCTCTTCCTCTCAGAATTGCCATATCCTCCGCCTTTACCACCTCCCTCCACTCTCGTATGTTCTCCATTCATTACGTATGATTCTCTGTGTTTCTTATGTTCTTGATCACTTTATGGGTTTTTTTTTTTTTTTTTTTTTTTGTCTTTGTTTTTTCATTCTTCTTTACTTCTTGTATGACGATGAATTCATTAGCGATTTCCTTTCTTCTTAATTATTATTTCCTAGGACATCGTCATTTTGCTGTTTCATTGCCTAGAGCTGCAGCCTCTGATGAATCTAATGGATCTAGTTCATTCTTTACTGAACAACGCGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCACTCACTCTGGAAGATTCTCCTCCTGAGGAGATCCCTTCCGTCGTACTTGCGGCAACGGAAGTACCTAAACAAGAACCGGTTGAAGATGTGCCTGTGATAACTCTGGACGATTCTTCTTCTGCTGGGAAGGTCGAAATGGTGACGTCTGAAGAGCCTAAAGAACAACCACTTGAGGGTGCGCAAGAACAGGCATTTGAATTTTTGAATGATCTTAAAGTAAGAACCTTCATTGAATATGATTTGCGATTTTTTGCAAGTTAAATCCGAAAGTATGACATAATATTTTTTTCAAGAAAAGACTGATTTACATCAAATTAACTTGATTTTTGCTTCTGTTGGTTATTTGTTTATTCATTTAGCCAGATTGTGCAGTGTTCAATGCCATCCTTGGTGTCTTTGACAATTTTTTTAATCATAATTGTTGAGTAATTGGATATATCTTCTATTTGAACTTTTTCTGGGGCATTTTCCTCTTTTTTTAATAAATAAAAATATTTGGGTTTTGTTTTTTTCTTCCCATTTGTTTTCCTCATTTTTTCTTCCTTGGATCACATTTTTAAAGTTAGTTGCAGTGATGATATCATGAAACTTGATAGTATATACCAATGCTACATGAAACGTCGACAACTATGTCGGCCTGAGCGGTTAATCGAGCAACCTAACTCCTCTATTTGATTTTTAATTGTTGTATTTTTGTTCTATTTAAAAAAAATGTTTTTTTGTTTCTTTCTGCTTTGCATCCATTGTGTGTTAAACGTGCTGATGTTTTCTGATCGATTTAAGCGGCACCTACCTCTAAGGAACAAGTTTTTCACAAACTATATTGTTGTCCATTCTGTCTTTGTTCATAGGAAACTTTTTCAGCTTGGTTTTGGGATTTAAAACTGGGAATTTTGGTGTTGTCAACCCCCTTTCAAGTGTGGCGTTGAATGTGAAAGATAATTTCGAAAGGGATATCACATCCCCTTACATAGCTTTGTCAACTAGGAAAAACCCCATTTTCATATAACTGAAGTTTAATTGTACATTTTTCATTTTGGGATTGCAATAGCTTCACCCTGTGAATGCTTTGATGATTACTTGTGCTTGCAGCTTGAGTCTGTTGATACATACAGTCTTGCCTTGTATGGTGCTGGTGCTTTCTTTGGAATTTGGTTGGTTTCCGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTAAAGTTTGCATAGAATTGCATAAATAAGTTTTAGTTTTTTGAGATGTGAATTTATAACCATGGATTCTTGTAAATATAGGTACCAAAGTTATTGGAAGTTGTGGGGCTTGGTTACAGTGTGTGGTTCACTGCTCGCTACTTGTTATTCAAGGTAATTGCTTGAAGTGGCTTGGTTTGATGAAAACCTACCCTTTTCTGATTTTCTCCAAATATGTGATAATTGAGAGAATTCCTTTTGTGGGACGTTACAGGAAAGTAGAGATGAATTGGCTGCCAGGATTGACGAGTTAAAGGAGCAGGTTCTTGGTTCAGATTGACAACGGTTCGGTTGGATATATTTTTCTGTCATACCTAGGTAGTTAGTTATGTTTGGGTAGATAAAAGATAGCTGGATGTGCTGATAAACAATATATATGATATAGATGATGATTACATTGTCTCTGATGCAAATAAGCAAATACTTGATTCGCTTATAGAGAAATGTTTTTCTAATATTGAGTTTGGGTGAACTAAGGCCCATTTTTCAGGAAGAGTTTGGTAAGATGGTCGATAGCTATGAGAGAAATGCATCCATTCCACTCTTCTAAAAACAGAGTCAAGTATGAAACCCTTTGGATTTTGGAAGGTAGGTTTTTAGGTTAGTTTAATAATATATTTTGTTCTTTATATATATACACGTTTTGAGCTTATATTTTGAGTAAGGGTGTATTCAAAATTAATGCCAAATTTTGATAGTTAATTTGGGCTCGTTGAATTAGAAACGCAGTTTATTGAGCAAAATTGCTTCAAAATGATGAAAACTATCCCATTTTAAGCTCTTGTTTAAATGATGTATTAGGATATATTTGTT

Coding sequence (CDS)

ATGGCCATCGACCTCTCTGCTTCCCCACCCCTTTTCTCTACTCTTCTCACCGGAAACCCCTACCTTCGCCCCAGGCCCGCTCTTCCTCTCAGAATTGCCATATCCTCCGCCTTTACCACCTCCCTCCACTCTCGACATCGTCATTTTGCTGTTTCATTGCCTAGAGCTGCAGCCTCTGATGAATCTAATGGATCTAGTTCATTCTTTACTGAACAACGCGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCACTCACTCTGGAAGATTCTCCTCCTGAGGAGATCCCTTCCGTCGTACTTGCGGCAACGGAAGTACCTAAACAAGAACCGGTTGAAGATGTGCCTGTGATAACTCTGGACGATTCTTCTTCTGCTGGGAAGGTCGAAATGGTGACGTCTGAAGAGCCTAAAGAACAACCACTTGAGGGTGCGCAAGAACAGGCATTTGAATTTTTGAATGATCTTAAAGTAAGAACCTTCATTGAATATGATTTGCGATTTTTTGCAAGTTAA

Protein sequence

MAIDLSASPPLFSTLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPRAAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSVVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFLNDLKVRTFIEYDLRFFAS
Homology
BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-27
Identity = 60/104 (57.69%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 4   SEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLV 63
           SE P+    E  + QA EFLND+KL+S  TYS+ LYG+GA   ++L SAIV ++++IPL 
Sbjct: 91  SEAPQ---AEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLF 150

Query: 64  PKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 108
           PKL+EVVGLGY++WFT RYLLFK +R+EL  ++ E+K+QVLGSD
Sbjct: 151 PKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-18
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 0

Query: 21  EFLNDLK-----LESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYS 80
           E + DLK     LE+  T  + +YG GA   +WL S +VGA++S+PL+PK++E+VGLGY+
Sbjct: 75  ELITDLKEKWDGLENKST--VLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYT 134

Query: 81  VWFTARYLLFKESRDELAARIDELKEQVLGSD 108
            WF  RYLLFK SR ELA  I+ LK+++ GS+
Sbjct: 135 GWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 32  DTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDE 91
           D Y++          +W  + ++ A+D +PLVP +LE+VG+GY+ WFT + L+FK  R+ 
Sbjct: 99  DKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREA 158

Query: 92  LAARIDELKEQVLGS 107
           L  ++    + +LGS
Sbjct: 159 LFEKVKSTYKDILGS 173

BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 0

Query: 29  ESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKES 88
           +S D   L   G      +W    ++ A+D +P++    E+VG+ +S WFT RYLLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 89  RDELAARIDELKEQVLG 106
           R EL+  + +    +LG
Sbjct: 139 RQELSKIVKKSVADILG 155

BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-05
Identity = 20/56 (35.71%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 50  VSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 106
           ++ ++ A+D IP++  + E++G+ Y VWF  RYLL + +R EL  +I+ +K ++ G
Sbjct: 823 MAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDKIENIKREIFG 878

BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_011653358.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN53657.1 hypothetical protein Csa_014678 [Cucumis sativus])

HSP 1 Score: 205 bits (522), Expect = 1.24e-64
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 133 MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 192

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD
Sbjct: 193 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 239

BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_008455611.1 (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 201 bits (510), Expect = 2.19e-63
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           + TSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 91  IATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 150

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQV GSD
Sbjct: 151 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFGSD 197

BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_008455610.1 (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis melo] >KAA0045383.1 protein CURVATURE THYLAKOID 1D [Cucumis melo var. makuwa] >TYJ96953.1 protein CURVATURE THYLAKOID 1D [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (510), Expect = 5.85e-63
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           + TSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 122 IATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 181

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQV GSD
Sbjct: 182 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFGSD 228

BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_038903367.1 (protein CURVATURE THYLAKOID 1D, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 186 bits (471), Expect = 5.87e-57
Identity = 94/106 (88.68%), Postives = 100/106 (94.34%), Query Frame = 0

Query: 2   VTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIP 61
           V SEEPKE+ +EGAQEQ FE LND KLESVDTYSL LYGAGAFFGIWLVSA++GAVDSIP
Sbjct: 129 VASEEPKEEAVEGAQEQGFELLNDFKLESVDTYSLILYGAGAFFGIWLVSAVIGAVDSIP 188

Query: 62  LVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           LVPKLLEVVGLGYSVWFTARYLLFKESRDELAA+IDE+KEQVLGSD
Sbjct: 189 LVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGSD 234

BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 161 bits (408), Expect = 5.84e-47
Identity = 80/101 (79.21%), Postives = 91/101 (90.10%), Query Frame = 0

Query: 5   EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVP 64
           EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +VGA DSIPLVP
Sbjct: 171 EEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVP 230

Query: 65  KLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 105
           KLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 231 KLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A0A0KZ51 (CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 6.01e-65
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 133 MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 192

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD
Sbjct: 193 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 239

BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A1S3C1A4 (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 1.06e-63
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           + TSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 91  IATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 150

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQV GSD
Sbjct: 151 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFGSD 197

BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A5D3BCB5 (Protein CURVATURE THYLAKOID 1D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00660 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 2.83e-63
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           + TSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 122 IATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 181

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQV GSD
Sbjct: 182 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFGSD 228

BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A1S3C1G0 (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 2.83e-63
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 1   MVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 60
           + TSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI
Sbjct: 122 IATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSI 181

Query: 61  PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGSD 107
           PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQV GSD
Sbjct: 182 PLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFGSD 228

BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A6J1JJV3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 2.83e-47
Identity = 80/101 (79.21%), Postives = 91/101 (90.10%), Query Frame = 0

Query: 5   EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVP 64
           EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +VGA DSIPLVP
Sbjct: 171 EEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVP 230

Query: 65  KLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 105
           KLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 231 KLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LDD32.9e-2757.69Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
O046164.3e-1850.00Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q8LCA11.4e-0834.67Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9M8121.3e-0633.77Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q119Z51.1e-0535.71Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=... [more]
Match NameE-valueIdentityDescription
XP_011653358.11.24e-64100.00protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN53657.1 hypo... [more]
XP_008455611.12.19e-6397.20PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis mel... [more]
XP_008455610.15.85e-6397.20PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis mel... [more]
XP_038903367.15.87e-5788.68protein CURVATURE THYLAKOID 1D, chloroplastic-like [Benincasa hispida][more]
XP_022990797.15.84e-4779.21protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A0A0KZ516.01e-65100.00CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 S... [more]
A0A1S3C1A41.06e-6397.20protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 OS=Cucumis melo OX=3656... [more]
A0A5D3BCB52.83e-6397.20Protein CURVATURE THYLAKOID 1D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3C1G02.83e-6397.20protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656... [more]
A0A6J1JJV32.83e-4779.21protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxim... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availablePANTHERPTHR33222:SF2PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTICcoord: 3..106
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 32..105
e-value: 1.4E-25
score: 88.9
IPR033344Protein CURVATURE THYLAKOID 1PANTHERPTHR33222FAMILY NOT NAMEDcoord: 3..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G11872.T3Cucsat.G11872.T3mRNA
Cucsat.G11872.T4Cucsat.G11872.T4mRNA
Cucsat.G11872.T1Cucsat.G11872.T1mRNA
Cucsat.G11872.T2Cucsat.G11872.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009579 thylakoid