Cucsat.G11872 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCAAGTAATAGGGGAAGTCTACGAGAGCAATCTAGAATGAGACGACGCTATATATATGGTTATCGTCGTTTCCTCAACCCTCAACCCTCAACCCTCAACCCTACCCTCCAATGTTATAAGAAACACTCATTTCACCCTCATCGCCTTCGCCCATTTCATTTTTAATTTCAACCACTGTTTCGCCCATTCCCCTCTCCCGCCATGGCCATCGACCTCTCTGCTTCCCCACCCCTTTTCTCTACTCTTCTCACCGGAAACCCCTACCTTCGCCCCAGGCCCGCTCTTCCTCTCAGAATTGCCATATCCTCCGCCTTTACCACCTCCCTCCACTCTCGTATGTTCTCCATTCATTACGTATGATTCTCTGTGTTTCTTATGTTCTTGATCACTTTATGGGTTTTTTTTTTTTTTTTTTTTTTTGTCTTTGTTTTTTCATTCTTCTTTACTTCTTGTATGACGATGAATTCATTAGCGATTTCCTTTCTTCTTAATTATTATTTCCTAGGACATCGTCATTTTGCTGTTTCATTGCCTAGAGCTGCAGCCTCTGATGAATCTAATGGATCTAGTTCATTCTTTACTGAACAACGCGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCACTCACTCTGGAAGATTCTCCTCCTGAGGAGATCCCTTCCGTCGTACTTGCGGCAACGGAAGTACCTAAACAAGAACCGGTTGAAGATGTGCCTGTGATAACTCTGGACGATTCTTCTTCTGCTGGGAAGGTCGAAATGGTGACGTCTGAAGAGCCTAAAGAACAACCACTTGAGGGTGCGCAAGAACAGGCATTTGAATTTTTGAATGATCTTAAAGTAAGAACCTTCATTGAATATGATTTGCGATTTTTTGCAAGTTAAATCCGAAAGTATGACATAATATTTTTTTCAAGAAAAGACTGATTTACATCAAATTAACTTGATTTTTGCTTCTGTTGGTTATTTGTTTATTCATTTAGCCAGATTGTGCAGTGTTCAATGCCATCCTTGGTGTCTTTGACAATTTTTTTAATCATAATTGTTGAGTAATTGGATATATCTTCTATTTGAACTTTTTCTGGGGCATTTTCCTCTTTTTTTAATAAATAAAAATATTTGGGTTTTGTTTTTTTCTTCCCATTTGTTTTCCTCATTTTTTCTTCCTTGGATCACATTTTTAAAGTTAGTTGCAGTGATGATATCATGAAACTTGATAGTATATACCAATGCTACATGAAACGTCGACAACTATGTCGGCCTGAGCGGTTAATCGAGCAACCTAACTCCTCTATTTGATTTTTAATTGTTGTATTTTTGTTCTATTTAAAAAAAATGTTTTTTTGTTTCTTTCTGCTTTGCATCCATTGTGTGTTAAACGTGCTGATGTTTTCTGATCGATTTAAGCGGCACCTACCTCTAAGGAACAAGTTTTTCACAAACTATATTGTTGTCCATTCTGTCTTTGTTCATAGGAAACTTTTTCAGCTTGGTTTTGGGATTTAAAACTGGGAATTTTGGTGTTGTCAACCCCCTTTCAAGTGTGGCGTTGAATGTGAAAGATAATTTCGAAAGGGATATCACATCCCCTTACATAGCTTTGTCAACTAGGAAAAACCCCATTTTCATATAACTGAAGTTTAATTGTACATTTTTCATTTTGGGATTGCAATAGCTTCACCCTGTGAATGCTTTGATGATTACTTGTGCTTGCAGCTTGAGTCTGTTGATACATACAGTCTTGCCTTGTATGGTGCTGGTGCTTTCTTTGGAATTTGGTTGGTTTCCGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTAAAGTTTGCATAGAATTGCATAAATAAGTTTTAGTTTTTTGAGATGTGAATTTATAACCATGGATTCTTGTAAATATAGGTACCAAAGTTATTGGAAGTTGTGGGGCTTGGTTACAGTGTGTGGTTCACTGCTCGCTACTTGTTATTCAAGGTAATTGCTTGAAGTGGCTTGGTTTGATGAAAACCTACCCTTTTCTGATTTTCTCCAAATATGTGATAATTGAGAGAATTCCTTTTGTGGGACGTTACAGGAAAGTAGAGATGAATTGGCTGCCAGGATTGACGAGTTAAAGGAGCAGGTTCTTGGTTCAGATTGACAACGGTTCGGTTGGATATATTTTTCTGTCATACCTAGGTAGTTAGTTATGTTTGGGTAGATAAAAGATAGCTGGATGTGCTGATAAACAATATATATGATATAGATGATGATTACATTGTCTCTGATGCAAATAAGCAAATACTTGATTCGCTTATAGAGAAATGTTTTTCTAATATTGAGTTTGGGTGAACTAAGGCCCATTTTTCAGGAAGAGTTTGGTAAGATGGTCGATAGCTATGAGAGAAATGCATCCATTCCACTCTTCTAAAAACAGAGTCAAGTATGAAACCCTTTGGATTTTGGAAGGTAGGTTTTTAGGTTAGTTTAATAATATATTTTGTTCTTTATATATATACACGTTTTGAGCTTATATTTTGAGTAAGGGTGTATTCAAAATTAATGCCAAATTTTGATAGTTAATTTGGGCTCGTTGAATTAGAAACGCAGTTTATTGAGCAAAATTGCTTCAAAATGATGAAAACTATCCCATTTTAAGCTCTTGTTTAAATGATGTATTAGGATATATTTGTT ATGGCCATCGACCTCTCTGCTTCCCCACCCCTTTTCTCTACTCTTCTCACCGGAAACCCCTACCTTCGCCCCAGGCCCGCTCTTCCTCTCAGAATTGCCATATCCTCCGCCTTTACCACCTCCCTCCACTCTCGACATCGTCATTTTGCTGTTTCATTGCCTAGAGCTGCAGCCTCTGATGAATCTAATGGATCTAGTTCATTCTTTACTGAACAACGCGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCACTCACTCTGGAAGATTCTCCTCCTGAGGAGATCCCTTCCGTCGTACTTGCGGCAACGGAAGTACCTAAACAAGAACCGGTTGAAGATGTGCCTGTGATAACTCTGGACGATTCTTCTTCTGCTGGGAAGGTCGAAATGGTGACGTCTGAAGAGCCTAAAGAACAACCACTTGAGGGTGCGCAAGAACAGGCATTTGAATTTTTGAATGATCTTAAAGTAAGAACCTTCATTGAATATGATTTGCGATTTTTTGCAAGTTAA MAIDLSASPPLFSTLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPRAAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSVVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFLNDLKVRTFIEYDLRFFAS Homology
BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.9e-27 Identity = 60/104 (57.69%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.3e-18 Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.1e-05 Identity = 20/56 (35.71%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_011653358.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN53657.1 hypothetical protein Csa_014678 [Cucumis sativus]) HSP 1 Score: 205 bits (522), Expect = 1.24e-64 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_008455611.1 (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 201 bits (510), Expect = 2.19e-63 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_008455610.1 (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis melo] >KAA0045383.1 protein CURVATURE THYLAKOID 1D [Cucumis melo var. makuwa] >TYJ96953.1 protein CURVATURE THYLAKOID 1D [Cucumis melo var. makuwa]) HSP 1 Score: 201 bits (510), Expect = 5.85e-63 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_038903367.1 (protein CURVATURE THYLAKOID 1D, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 186 bits (471), Expect = 5.87e-57 Identity = 94/106 (88.68%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Cucsat.G11872 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 161 bits (408), Expect = 5.84e-47 Identity = 80/101 (79.21%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A0A0KZ51 (CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 SV=1) HSP 1 Score: 205 bits (522), Expect = 6.01e-65 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A1S3C1A4 (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1) HSP 1 Score: 201 bits (510), Expect = 1.06e-63 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A5D3BCB5 (Protein CURVATURE THYLAKOID 1D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00660 PE=4 SV=1) HSP 1 Score: 201 bits (510), Expect = 2.83e-63 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A1S3C1G0 (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1) HSP 1 Score: 201 bits (510), Expect = 2.83e-63 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cucsat.G11872 vs. ExPASy TrEMBL
Match: A0A6J1JJV3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 2.83e-47 Identity = 80/101 (79.21%), Postives = 91/101 (90.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|