Cucsat.G11811 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G11811
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic
Location	ctg1820: 4115619 .. 4118046 (+)
RNA-Seq Expression	Cucsat.G11811
Synteny	Cucsat.G11811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTAATTTGAATAAAGATTACCCAACTTAATTAAATTTTATTAAAAATAAATGGATAAACCCAAACCCACTTCTCGGGTTCGCCAATTTACGTTCACAGTATCGCACTCATCTCTATAATCAGTAGACTCATGTCCATGGCTTCCTCAATCTCCCTTCCATCTCCTCAAACTCCGCTTCTTAAATCCTCCTTTCTCCCACAAAACCGCCGCCGCCTCCTTCTCCACCGACCATTTCCCCTGCCCGGCCGTCACGCCTCATCAACCCAACACGCTTTCCGGCCCTCCGCCGCCTTCGATTTAGCCCAGCTTCTCGGCGGAAGAGGCCTCTGCAATGGCGAGCAAGGTCTAAAAGAGGAACTCAAGAGAAACGTCGACGACAATCCAGTCCTCGCAGATGGAAGCGAAATTCCAGGAACCTCCGATAAATTACCGGTTGATAGTGTTCCAGAAGATGGGTTCGAGAAGGAATTAATGGGCTTAACCGGTGGGTTTCCCGGCGGAGAGAAAGGATTAAAAAAATTCATATCGGAGAATCCTCCTCCTCGGAAAACCCTCCGCTTCAAAATCCGGCGAAATCGGCTCGATTATAAATACACAGAAACCAAAGCCGCCGGATCTTCCACTGTTGCTACCGGGAATGATTGCGATTGTGAAGAATCCTAACAATCCGTACTACATGTATTGTGGAATCGTTCAAAGAATCACAGATGGAAAAGCTGGGGTTCTTTTTGAAGGAGGAAATTGGGATCGATTGATAACGTTTAGATTGGAGGAGCTGGAACGAAGAGAAAAAGGACCGCCGATGAAGAACCCTAAATCGGCTGTTCTTGAACCGCTTCTTCAAAAGGATTCTCAATGATGATGAACAGATCGGTGATGGTGATTCCTTCTTTATCCTCTTCTTTGTAGTTATCTCATCTGTTTGTTCATCTCGAATTCCTACTTGGAAAAAATTTGTGAATATTTCCAATCTTCCAATCCAAGAAACGCGATTTTCTAGTTGTTATTAGAGATTTTTTTACGGCTAATTACATATTTACTCCTAATTTTATGACTAAACATCTAATTACACATTTTTTAGTTTTTAGTTTTTTGGCCCTGAAATTTTAAATTTTAGTTTGGTTTTCTTTTGGTTTTGGAAATTAGCCCAAATGTTACTTCATTAGTTATTTACTGATATCTTTATTTACATTTTGTTATATATATAAATTAAAGATTAAGTCCAATTTATAAATAAAAATTGAAAAGAAAAAGAAAAGAAATAGGGGTTTTTTTTCCCCCTAATGTAGTACTTAAGCTTAGAAATCATTTGTTTACTTGAAAAACATCAAATTACTTCTGAAAAGGGCGTAAGGTCCCATTTTCTTTCTTTTAATTGAGTTTTACTTTTCACACAAAAATGAAAGTTTGAAACGTGCATCTTTATCATACCTCAAGATTAATATTGAAGAAATTTCCTTTTCAGCTAAACGTTGGGTATGGGCTGCAAAATTTTCCACTCAAATATGTCTCTATCGTTTTTTGTTAAATTGACAACTCTATTGCCATGAAATTGAACGTTTATGGTTTTATTATACTCTTTAAATTTTGTGTCTATAGATTAATTAATTTCTAATAATTTTAAATTTAAAAAAAAAAAACACAAACTATTCAACACAAATTTAGAAGCTCCAAGACTAAATTTGTAACTTCATAAAGAATTTTTTTTTTAATAGACTGAGCAATAAGTGAATTGGAATCAGGTGGACGTGGTGTAAATTTATTTTTTATTTTTTAAATTTAAATTTTAGTTATAACGAGTAATTTCACTCATTTTAAAATTATTAAATAAATTAAATATTATAATTTGAGTTAGCTTAACTCAAAAATATTAAAATTTTGTTTATAATTTTATGTGTTAAATAAGATTTTTTTAGTCAAAATAGTTGGTATAATTTTTTATTGGTTTGAGAGAATAAATATATAATTTCTTTATTTTTTGTTTATGTAAAATAAAAAGAATTTTTTTTGTTACGTAGAAAATTGTACATTTTTGGAGAAAATATAAATCTAATTCTCATCTTAATAAAAATAAATAACAAAAGTTTTAAATTTTAAATATATTTAATAAATAATTAAATTTTTTAAAACTTAAGAGTATATTATAGTAGCGTACAAAATAGAATTTAAATATACGTTTTTTTCCCTTTGGTCACTCTCGTTCGAAAACTTATAACTTATTTGGATTAATTTAAGAAAAAAGTATTTTTTAGAAAAAAAAAATCATTTTTATTTAAACGTTTTTTATAAAAGCAGTTTAAATATTACATTGGAGGTACATTATAGAATGACAACCATAACTATCACTAAATGTAACTCTATTTAACTTTTGTTTTTGCAGGACTCTTTTGCATTATTTTTTGAAACCTAGCTATTAGACATTTTTT

Coding sequence (CDS)

ATGTCCATGGCTTCCTCAATCTCCCTTCCATCTCCTCAAACTCCGCTTCTTAAATCCTCCTTTCTCCCACAAAACCGCCGCCGCCTCCTTCTCCACCGACCATTTCCCCTGCCCGGCCGTCACGCCTCATCAACCCAACACGCTTTCCGGCCCTCCGCCGCCTTCGATTTAGCCCAGCTTCTCGGCGGAAGAGGCCTCTGCAATGGCGAGCAAGGTCTAAAAGAGGAACTCAAGAGAAACGTCGACGACAATCCAGTCCTCGCAGATGGAAGCGAAATTCCAGGAACCTCCGATAAATTACCGGTTGATAGTGTTCCAGAAGATGGGTTCGAGAAGGAATTAATGGGCTTAACCGGTGGGTTTCCCGGCGGAGAGAAAGGATTAAAAAAATTCATATCGGAGAATCCTCCTCCTCGGAAAACCCTCCGCTTCAAAATCCGGCGAAATCGGCTCGATTATAAATACACAGAAACCAAAGCCGCCGGATCTTCCACTGTTGCTACCGGGAATGATTGCGATTGTGAAGAATCCTAA

Protein sequence

MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRKTLRFKIRRNRLDYKYTETKAAGSSTVATGNDCDCEES

Homology

[Close]

BLAST of Cucsat.G11811 vs. ExPASy Swiss-Prot
Match: Q9T0A4 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhS PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-26
Identity = 66/138 (47.83%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 5   SSISLPSPQTPLLKSSFLPQNRRRLLLHRP-FPLPGRHASSTQHAFRPSAAFDLAQLLGG 64
           SSI++P+ +TP+ +S FL Q  +   ++R  FP P +   S  +  +    F+L +++GG
Sbjct: 4   SSITIPTIRTPIHRSKFLGQTHQFSTVNRSVFPPPKQ--QSKLYQVKAMGKFNLWEVMGG 63

Query: 65  RGLCNGEQGLKEELKRNVDDNPVL--ADGSEIPGTSDKLPVD-SVPEDGFEKELMGLTGG 124
           RGLCNGE+G+++EL+RN++D      A+ +E    SD   +   VPEDGFEKE+MGLTGG
Sbjct: 64  RGLCNGEKGIEKELQRNIEDEQETSKAENNETERESDDSNLSFKVPEDGFEKEMMGLTGG 123

Query: 125 FPGGEKGLKKFISENPPP 139
           FPGGEKGLK FI +NPPP
Sbjct: 124 FPGGEKGLKTFIEKNPPP 139

[Close]

BLAST of Cucsat.G11811 vs. NCBI nr
Match: XP_004148998.1 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucumis sativus] >KAE8649207.1 hypothetical protein Csa_014581 [Cucumis sativus])

HSP 1 Score: 283 bits (724), Expect = 4.57e-94
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQL 60
           MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQL
Sbjct: 1   MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQL 60

Query: 61  LGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGG 120
           LGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGG
Sbjct: 61  LGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGG 120

Query: 121 FPGGEKGLKKFISENPPPRK 140
           FPGGEKGLKKFISENPPPRK
Sbjct: 121 FPGGEKGLKKFISENPPPRK 140

[Close]

BLAST of Cucsat.G11811 vs. NCBI nr
Match: XP_008451952.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucumis melo] >KAA0044900.1 NAD(P)H-quinone oxidoreductase subunit S [Cucumis melo var. makuwa] >TYK16570.1 NAD(P)H-quinone oxidoreductase subunit S [Cucumis melo var. makuwa])

HSP 1 Score: 266 bits (680), Expect = 2.11e-87
Identity = 130/138 (94.20%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASST HAFRPSAAFDLAQLLG
Sbjct: 1   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTHHAFRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+G++EELKRNVDDNPV+ADG+EIP TS KLPVDSVPEDGFEKELMGLTGGFP
Sbjct: 61  GRGLCNGERGVEEELKRNVDDNPVIADGNEIPETSTKLPVDSVPEDGFEKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPPRK 140
           GGEKGLKKFISENPPPRK
Sbjct: 121 GGEKGLKKFISENPPPRK 138

[Close]

BLAST of Cucsat.G11811 vs. NCBI nr
Match: XP_038902579.1 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida] >XP_038902587.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida] >XP_038902595.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida] >XP_038902601.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida] >XP_038902605.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida])

HSP 1 Score: 233 bits (594), Expect = 2.55e-74
Identity = 119/136 (87.50%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLP+PQTPLLKS+FL QNRRR LLHRPFPLP R AS T HAFRPSAAFDLAQLLG
Sbjct: 1   MASSISLPTPQTPLLKSTFLGQNRRRFLLHRPFPLPHR-ASPTHHAFRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+GLKEELKRNV+DNPV ADG EIP TS+KL VD VPEDGFEKELMGLTGGFP
Sbjct: 61  GRGLCNGERGLKEELKRNVEDNPV-ADGGEIPETSEKLAVDRVPEDGFEKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPP 138
           GGEKGL+KFISENPPP
Sbjct: 121 GGEKGLRKFISENPPP 134

[Close]

BLAST of Cucsat.G11811 vs. NCBI nr
Match: XP_023553886.1 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204 bits (518), Expect = 7.86e-63
Identity = 104/136 (76.47%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQ+PLLKS+FL Q  RR  LHR FPLP R AS + H FRPSA+FDLAQLLG
Sbjct: 1   MASSISLPSPQSPLLKSTFLGQTTRRFHLHRQFPLP-RRASPSHHTFRPSASFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+GLKEELKRNV +  +   G+EIP T++KL VD VPEDGF+KELMGLTGGFP
Sbjct: 61  GRGLCNGEKGLKEELKRNVVEETI---GAEIPETTEKLAVDKVPEDGFDKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPP 138
           GGEKGL+KFISENPPP
Sbjct: 121 GGEKGLRKFISENPPP 132

[Close]

BLAST of Cucsat.G11811 vs. NCBI nr
Match: XP_022982522.1 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucurbita maxima])

HSP 1 Score: 202 bits (514), Expect = 3.17e-62
Identity = 103/136 (75.74%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQ+PLLKS+FL +  RR  LHR FPLP R AS + H FRPSAAFDLAQLLG
Sbjct: 1   MASSISLPSPQSPLLKSTFLGRTTRRFHLHRQFPLP-RRASPSHHTFRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+GLKEELKRNV +  +   G+EIP T++KL VD VPEDGF+KELMGLTGGFP
Sbjct: 61  GRGLCNGEKGLKEELKRNVVEETI---GAEIPETTEKLAVDKVPEDGFDKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPP 138
           GGEKGL+KFI+ENPPP
Sbjct: 121 GGEKGLRKFITENPPP 132

[Close]

BLAST of Cucsat.G11811 vs. ExPASy TrEMBL
Match: A0A0A0KV29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052580 PE=4 SV=1)

HSP 1 Score: 283 bits (724), Expect = 1.93e-94
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQL 60
           MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQL
Sbjct: 1   MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQL 60

Query: 61  LGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGG 120
           LGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGG
Sbjct: 61  LGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGG 120

Query: 121 FPGGEKGLKKFISENPPPRK 140
           FPGGEKGLKKFISENPPPRK
Sbjct: 121 FPGGEKGLKKFISENPPPRK 140

[Close]

BLAST of Cucsat.G11811 vs. ExPASy TrEMBL
Match: A0A5D3CYY1 (NAD(P)H-quinone oxidoreductase subunit S OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003910 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 1.02e-87
Identity = 130/138 (94.20%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASST HAFRPSAAFDLAQLLG
Sbjct: 1   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTHHAFRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+G++EELKRNVDDNPV+ADG+EIP TS KLPVDSVPEDGFEKELMGLTGGFP
Sbjct: 61  GRGLCNGERGVEEELKRNVDDNPVIADGNEIPETSTKLPVDSVPEDGFEKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPPRK 140
           GGEKGLKKFISENPPPRK
Sbjct: 121 GGEKGLKKFISENPPPRK 138

[Close]

BLAST of Cucsat.G11811 vs. ExPASy TrEMBL
Match: A0A1S3BSR5 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493099 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 1.02e-87
Identity = 130/138 (94.20%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASST HAFRPSAAFDLAQLLG
Sbjct: 1   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTHHAFRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+G++EELKRNVDDNPV+ADG+EIP TS KLPVDSVPEDGFEKELMGLTGGFP
Sbjct: 61  GRGLCNGERGVEEELKRNVDDNPVIADGNEIPETSTKLPVDSVPEDGFEKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPPRK 140
           GGEKGLKKFISENPPPRK
Sbjct: 121 GGEKGLKKFISENPPPRK 138

[Close]

BLAST of Cucsat.G11811 vs. ExPASy TrEMBL
Match: A0A6J1IWU0 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481312 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 1.54e-62
Identity = 103/136 (75.74%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQ+PLLKS+FL +  RR  LHR FPLP R AS + H FRPSAAFDLAQLLG
Sbjct: 1   MASSISLPSPQSPLLKSTFLGRTTRRFHLHRQFPLP-RRASPSHHTFRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+GLKEELKRNV +  +   G+EIP T++KL VD VPEDGF+KELMGLTGGFP
Sbjct: 61  GRGLCNGEKGLKEELKRNVVEETI---GAEIPETTEKLAVDKVPEDGFDKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPP 138
           GGEKGL+KFI+ENPPP
Sbjct: 121 GGEKGLRKFITENPPP 132

[Close]

BLAST of Cucsat.G11811 vs. ExPASy TrEMBL
Match: A0A6J1FWM0 (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448039 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 4.08e-60
Identity = 101/136 (74.26%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 3   MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLG 62
           MASSISLPSPQ+PLLKS+FL +  RR  LHR FPLP R A  + H  RPSAAFDLAQLLG
Sbjct: 1   MASSISLPSPQSPLLKSTFLGRTTRRFHLHRQFPLP-RRALPSHHTSRPSAAFDLAQLLG 60

Query: 63  GRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGFEKELMGLTGGFP 122
           GRGLCNGE+GL EELKRNV +  +   G+EIP T++KL VD VPEDGF+KELMGLTGGFP
Sbjct: 61  GRGLCNGEKGLNEELKRNVVEETI---GAEIPETTEKLAVDKVPEDGFDKELMGLTGGFP 120

Query: 123 GGEKGLKKFISENPPP 138
           GGEKGL+KFISENPPP
Sbjct: 121 GGEKGLRKFISENPPP 132

The following BLAST results are available for this feature:

BLAST of Cucsat.G11811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T0A4	3.2e-26	47.83	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Cucsat.G11811 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148998.1	4.57e-94	100.00	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucumis sativus] >KAE86...	[more]
XP_008451952.1	2.11e-87	94.20	PREDICTED: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucumis melo...	[more]
XP_038902579.1	2.55e-74	87.50	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida] >XP_...	[more]
XP_023553886.1	7.86e-63	76.47	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucurbita pepo subsp. p...	[more]
XP_022982522.1	3.17e-62	75.74	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucurbita maxima]	[more]

BLAST of Cucsat.G11811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV29	1.93e-94	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052580 PE=4 SV=1	[more]
A0A5D3CYY1	1.02e-87	94.20	NAD(P)H-quinone oxidoreductase subunit S OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BSR5	1.02e-87	94.20	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1IWU0	1.54e-62	75.74	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A6J1FWM0	4.08e-60	74.26	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Cucurbita moschata OX...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..105
IPR021659	NADH dehydrogenase-like complex, subunit S	PANTHER	PTHR35494	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC	coord: 3..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G11811.T1	Cucsat.G11811.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)