Cucsat.G11703 (gene) Cucumber (B10) v3

Overview
NameCucsat.G11703
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description60S ribosomal protein L27
Locationctg1820: 3480557 .. 3486449 (+)
RNA-Seq ExpressionCucsat.G11703
SyntenyCucsat.G11703
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCGTCGTTCAAGCCTCGGATTAGGGTTTAGCTTCACCCTATAAGACATGGACGTCACCAAGAAGCGGAGGATGGACGAAAACGGTGTAAGCTATTGATTAAAAGATACAGTGCCGTCGGCCCAGTTGATTAACAAAAGCCCATTTAAATTATGGCCCAAATTGACTTGAAAAGCCCTAAAACCCTATTTTTAGGGAAAACCTAAATCAACGTTTCAACTGTTGGAGGCTTGGAGGCTTGGAGGCAGAGAGCAAGGAGACGGAAAACACAGACCAGAGGTGGAAGTTCGGAAATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGATGGAACTCGGGATCGCGCTTATGGCCACTGCTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTTATCCGCAAGGACTCCGCCAAGAAGACCGCTAAAAAATCCCGTGTCAAGGCCTTCATTAAGCTCGTTAATTATAGGCATCTGATGCCCACTAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTGTCGATTCGTTGCAGTCAAAGGACAAAAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACTAAGCTCAGATTCTGAAGTAGCTCATTCAGTTACTGGTTTCTTCTGGATTACTCTCGTATTAGGTTATTGAGCAATTTGATTTTTTGTTTTCGAGTTATCGTACGTTCTATCTTACTAATGTAGTTTGTTTTGGTGTTTAATTTTTGTCTGGACGTACTTTGAATGCTTGGATGAGAAATCTCTATGGTTATAATGATACATTTGAGACTTGCATTTATATAGATTCATATATTTTTCTGATATTATGTGATGGTTTTGGTATTCATATATTTTTCTTCTTCGTTTTAAAGTGAAAACCGCTTTACGAGATGTAGATTATGCAATGCAACTTATGTATCTGTATACTTTTAAATATTTGATGTCTGAGTATTTGCTTATGATTGAGTGGAGTTCCTTTAAACGTTTCCATCCCTTTTGTTTACCGGCCGGCTGTCTTGTTTTGAAGTCTTCGATCTTTTTTCGTTTCAACCAGAATGCTCTTGAAACGTCTTGAAATTCCAAGCATTCCCTTCTTCCTTTACAAATTTGTTACGATCTTAATGAGTTTTTAGATATACTGCTTGAATTACCTTTCCTTCTGAGATGGCTTCTGGGTTTTTATATATATATATATATATATATTTTTTTTTTAATCGATGAATTAAGCCTTCAATCTCTGGTATATTTGTCCGTAGTTCCGGATTTTACATTGAATATTAATGATTTATATCTGAAAAAAATAGGTATTGAAATTTATATCCCTATGATGATTGATTGGAATTATAAAAGTAGTGGACTGAGTCTTACTGGTGAGAAGTATCAATTCTGAGGGATATTTTTTTTGCAAATAGATTTCCTGAAGCTGTCATTGTGAGGTTTCAAATTTTGGTCAGGATTTCTTTTAAAAAATAATATATATGACCATGATGGATGTTGAGCAGAGGTTGTGTTCTTGTTTTGGGCAAGGGTACGGAGCATTTGAGTCTCTAATCCCTGTTTGTCGACCTTGAGTTTGGATGAAACTCACATTTTTTTTCTTTTTTTTCTTTTTTTTTTGTGAAAAATTCATTTATGGTTTGTGGTTTAGGGTTTGATTTTTATTTTAGGTTTGAAAGATGTTAGCTCCCATTGGGATTTTCGCGAGTTTGTTAAACTAAATATGATATACTCCTGAAAAATAATTTAGGATTTCTTTTTGTATTTTAACTATGTTATAATTGATGTCTAATTACACACAATTTCAATTTATTTTTTTATTTTAACTATGCTATAGTTGAAGTCTAATTACATGTTGATGAACAAATATCGATATTGGTTATGTACCCTTATTTGATGGATCACATCTACCTGTCCCTGATCTCTGAATAACACATAGTAGAAAGATGAAAAATTTGTTCTACTGTTTTCAGATCTAATGCATGATGAAAAATTTGTTCTACTATTTGGATACCATGTTACTTCAACTGGTAACTTTGCTCTGTGTAAGTTTCAATATCATCTATGCTTTGCTTGCGCTCATCTTCTCAAACATTTTGTCTTTGTTAATCAGAGATTAGACTGATTAGTTGCTGTATCCGTCTGCTATTTCAATAGTTTCTATTGCATTGGTTAATCAATTTATTGTGAATTTTCTATTGCATTTTATTTCCCTGTCTCGGAATATTCTACCAATGCATTGAATGCATGCCATGTTTAGGTCTTGGTGATGGCCTAGAGGGGAATACGATACCTTAATTAAATCTATGGAGCAATTTAGTCACGTTTATTTAAACTTACAACTCAAAAGTAATTTATTGTTGTTTTGGTGGAATCTGAGTTCAGTTCGAGTTGGTTTAGGACCGGTTGGTCCTGTGCTCTGTCTGGGTTTGAAAATCTTCAAAGTTAGATGAAATAAACATTATATTTTGTTGTGTGTGGTCTATTTCGTTTTTGTAGTTGATTATATTATTTTGGTATATGGTTTTATGAATGCCTGATGTTAATTTGAAATTCTAAAAACGTTCATATAATCTTACAGTTAAATTATACGTAAAAGACTATATCTCATGCATTGAGAGATTTTCATTTTCTTGTAGGGTCAGGGATAACTCTCTCAATCATTCATTTTTCATACACTTTCCCTTCTCGTCAATAGTAACCGTCTCTTCTCCCATGCTTCTGCCTCCTATGTTTAGTGTTTCCATTTCCACTCAGTATTTGTCTCCGACCACTTCACCTTTCATCGTTGGTCATAAGAATGTACAATTAGATTTGGCTTCCTCTTTCCTCCATTTTTTTCATGCTCGTTTTTTTGATTCCTTCATCTTCAAGTCATTTTTCCATTTCTCTTTTTCTCTAACTTTGATTTTTGCTAGTTTCTTCCCCTCTCTTTCTTTATCACTTTGCAGCCCTTTAGAAAGCTTTTGATGCATTGATATAGCATGCCTATGTATTCTTCTCTTTGCAATCTACAATCCATTTCTGCATCTACTCCCATATTCATAGAGTCTCTCCTCTTTCAACCACAGCGCATTTAGGTGTTTACTCCCAAGTCCCTTTCTCAATCGTGCCCGTGCTTTCTTCCATCCTTCCTTTACTTTTCAACACAAATTTCTTCGACATACTAGTTTCTTTTCGTAGATGATGAACACTATTTTCTCGTAATTCCTCTGCCATCCTTTCAACTTTCTTCGACATACTAGATTCTTTTCGTAGATGATGAACACTATTTTCTCGTAATTCCTCTGCCATCCTTTCAACTCTTTTGGACAACTCTAAATATTTAAGCTCCCTAATGTCTTCATTCTTTTCCAACCTCTCCTCTGTTTTGTTTCTACACATAACCTGTGTCATCCACAAAATGTTACAGCTCTGATACTAATTTGTTAGGATCTCACCTAACCAGAATTATCTCAATAAAATAAGATGAACTCAATAACTCTTAACAGAACATTCAAATATGAAATATATACTAGAAGATCATAAGAACAAGTAATCCTAGCCTTTTGAGAGGGCTGGACTTTCTCAAGGTTCCCTTACAAGGAAATATTTCTTCAAAATTCTTCACACCTCTTTTCAACCCCTCTCCCATACTATATATAACAAAAAGATGTAACCAACTTACTAACTATTTACTAATATGTTTGTTAACTACTATTTTTATTTTCTACATTTTCTACCAGTAATCCACTATTTTCCTATCTAGGGTCTTTACAAAATCCCTCTTCTTGAAAGCGACCGACGGAGAAAGAACTCCTTAAATATATCACTAAAAGATGTGTGACCCGCTAACAGAAAACCACATCCAAAATTTTTTCAAAGCAAACACATGTAAGCACAACTCGAAGGATAAAGAAAAGAGTTAAAACTTTTTCATTTCCGTTGTCTGGGAATTAAGTTTTATAATGCAATAATTAAAGTAACATAGCATAGCAGTGAACTGAAACCAACCTCTTCCCTAACAAACAATTAAAGGGATATCTTCATCCATCCCCACTTCTTCCAAGACATTTTGACAAAAAAAACCTCATATCGTGAAGCATCAAAAAGCGAATTGGGTGCATGAACAAAATAAGATTATTGATTAATCATTCTCAAAATAAAGAAGAGGAAAAAAGAGGTCATCAGCTGAAGACCATCTAATTGACCCCAATCACAAATTTCCACCTCGTTGCATATCTCAAAACAACCTAGTGAGATACTTAGGTTAAATAGAAAACAGAGACCTCAACAAGAATGGAACATAAGAACAAGAGGACCAAAACCCAGTAGCTGAGTAACTTGATCCAATAAAAGAAAGAAAATAAAAAGCAAACTAGATAACAGCTATGAGAAGGTAAAGGCTAAAGCACACTATTCCAAAGATATTAAGAGCTAATATCAATAATACCGTTCAAGTCATCACACAAAGGGGGTTTGTGGAGAATGCCTTCCAATTCCAACAAATCAGAACAAAACATGAATGCAAAACTTTTAACTACAAAAAAAATGGACAGCAAATCATCAAATGATGTAGGTAAGTAAGTCTCTGGGAGCCTTCTTTCATAGCAAAATTTAACCCCTTAGCAAAAAATTAGATCAAACGGATCATACCACAACAGGAATCACCAACTTAATAGCAAGAAAGCAACGTATACCATTTAAAGATGTTGTAGATAAGATTTGAACTCAAAATTTTGAAATTTTGAAAGGAATACACGTACTATTATGAAGTAGAATTCAATAGTAATAAAATATTATTTAATATATTATAATATAATATTTCAAAATTAATATTAAAATACAAAACTCGGTCTTCCTGGTCTCGAACAGTTGCATAACAATTAAAAACAAAATAAGCATATTTTTTTTTTTTGCTAATACTTCGGCCTAATTTCAAGTATGGCCCAGTGCAGTAGGAAGGCCCATTTTAATTGGGGCCCAATCTCAGTTGAAAATGCCCTAAAACCCAATATGTTGAGATAACCTAAATCTACGCCCCCTCTCTTGTTGAAGAAGAGCCGTCATAGAAGGGGAAGTACAGAGTGGAGGAGAAATCCGAAAATGGTGAAATTCCTCAAGCCCAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGTCGGAAGGCGGTCATCGTTCGCGCCTTTGACGACGGTACCCGGGATCGTGCTTATGGCCACTGTTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTCATCCGCAAGGACTCCGCCAAGAAAACCGCCAAAAAATCTCGAGTCAAGGCCTTTGTCAAGCTCGTCAACTACAGGCACCTGATGCCCACAAGGTACACTCTCGATGTCGATCTTAAAGACGTTGTCACTATTGATTCATTGCAGTCAAAAGACAAGAAGGTGACTGCCGCCAAGGAGACTAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTTTGAAGTGGCTGCTTCAATTATGGGTTTGTTCTGCATTACTCTCTTGTTAGGTTAACTGAACAACCTTATTTTTTGTTTTTGAGCTATCGTACGTTTTACATTACGAGTTTAGTTTGATTTGGTGTTATGGATTGTGTGCAAATTACATTTCCATCAGTTGAATTTATATTTAATACTTAATGTCTGAAGCCCGTGGATAGTTGCAAATATTCTTCTGGCTATTTTTGTTGTAGTTTGATAAGAGTTACTTTTACGCATATAAGAACTTAAATGAACAAATTTGATGTTTTAATGATTTTCAT

Coding sequence (CDS)

ATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGATGGAACTCGGGATCGCGCTTATGGCCACTGCTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTCATCCGCAAGGACTCCGCCAAGAAAACCGCCAAAAAATCTCGAGTCAAGGCCTTTGTCAAGCTCGTCAACTACAGGCACCTGATGCCCACAAGGTACACTCTCGATGTCGATCTTAAAGACGTTGTCACTATTGATTCATTGCAGTCAAAAGACAAGAAGGTGACTGCCGCCAAGGAGACTAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTTTGA

Protein sequence

MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Homology
[Close]
BLAST of Cucsat.G11703 vs. ExPASy Swiss-Prot
Match: Q05462 (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.7e-60
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVI+LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+P+KVI+KDSAK
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNY+HLMPTRYTLDVDLKD V  D LQSKDKKVTA KETKK  EER
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy Swiss-Prot
Match: Q8LCL3 (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-59
Identity = 113/135 (83.70%), Postives = 126/135 (93.33%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy Swiss-Prot
Match: P51419 (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-59
Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLK+V T+D+LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy Swiss-Prot
Match: Q9SKX8 (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.4e-55
Identity = 103/135 (76.30%), Postives = 123/135 (91.11%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy Swiss-Prot
Match: P41101 (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-53
Identity = 109/139 (78.42%), Postives = 119/139 (85.61%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           M KFLKPNKAVI+LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDSAK
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDL----KDVVTIDSLQSKDKKVTAAKETKKR 120
           K  KKSRVKAF+KLVNY H+MPTRYTLD DL    KDVV  D LQ++DKKVT A+ TK R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVT-ARRTKAR 120

Query: 121 FEERFKTGKNRWFFTKLRF 136
             ERFKTGKNRWFFTKLRF
Sbjct: 121 LAERFKTGKNRWFFTKLRF 138

[Close]
BLAST of Cucsat.G11703 vs. NCBI nr
Match: XP_004147739.1 (60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa_014739 [Cucumis sativus])

HSP 1 Score: 263 bits (671), Expect = 2.61e-88
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. NCBI nr
Match: XP_004147740.1 (60S ribosomal protein L27 [Cucumis sativus])

HSP 1 Score: 262 bits (670), Expect = 3.71e-88
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. NCBI nr
Match: KAE8649234.1 (hypothetical protein Csa_014974 [Cucumis sativus])

HSP 1 Score: 262 bits (670), Expect = 9.57e-88
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 29  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 88

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 89  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 148

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 149 FKTGKNRWFFTKLRF 163

[Close]
BLAST of Cucsat.G11703 vs. NCBI nr
Match: XP_008451849.1 (PREDICTED: 60S ribosomal protein L27-like [Cucumis melo] >KAA0062918.1 60S ribosomal protein L27-like [Cucumis melo var. makuwa] >TYK16424.1 60S ribosomal protein L27-like [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (667), Expect = 1.06e-87
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. NCBI nr
Match: XP_008451854.1 (PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >XP_008451855.1 PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >KAA0062915.1 60S ribosomal protein L27 [Cucumis melo var. makuwa] >TYK16427.1 60S ribosomal protein L27 [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (667), Expect = 1.06e-87
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy TrEMBL
Match: A0A0A0KXF9 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 1.26e-88
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy TrEMBL
Match: A0A0A0KVB4 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 1.79e-88
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy TrEMBL
Match: A0A1S3BSF6 (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1)

HSP 1 Score: 261 bits (667), Expect = 5.15e-88
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy TrEMBL
Match: A0A5A7V5M7 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002210 PE=3 SV=1)

HSP 1 Score: 261 bits (667), Expect = 5.15e-88
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]
BLAST of Cucsat.G11703 vs. ExPASy TrEMBL
Match: A0A5A7VAJ2 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002240 PE=3 SV=1)

HSP 1 Score: 261 bits (667), Expect = 5.15e-88
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 135
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

The following BLAST results are available for this feature:
BLAST of Cucsat.G11703 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q054625.7e-6085.9360S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1[more]
Q8LCL34.8e-5983.7060S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2[more]
P514194.8e-5983.7060S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2[more]
Q9SKX89.4e-5576.3060S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1[more]
P411013.0e-5378.4260S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1[more]
BLAST of Cucsat.G11703 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147739.12.61e-8899.2660S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa... [more]
XP_004147740.13.71e-8898.5260S ribosomal protein L27 [Cucumis sativus][more]
KAE8649234.19.57e-8898.52hypothetical protein Csa_014974 [Cucumis sativus][more]
XP_008451849.11.06e-8798.52PREDICTED: 60S ribosomal protein L27-like [Cucumis melo] >KAA0062918.1 60S ribos... [more]
XP_008451854.11.06e-8798.52PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >XP_008451855.1 PREDICTED: 6... [more]
BLAST of Cucsat.G11703 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXF91.26e-8899.2660S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1[more]
A0A0A0KVB41.79e-8898.5260S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1[more]
A0A1S3BSF65.15e-8898.5260S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1[more]
A0A5A7V5M75.15e-8898.5260S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7VAJ25.15e-8898.5260S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR10497:SF1660S RIBOSOMAL PROTEIN L27coord: 32..166
IPR005824KOWSMARTSM00739kow_9coord: 35..62
e-value: 0.0046
score: 26.2
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 32..166
e-value: 6.0E-60
score: 203.2
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 83..166
e-value: 4.8E-31
score: 107.0
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 32..166
IPR018262Ribosomal protein L27e, conserved sitePROSITEPS01107RIBOSOMAL_L27Ecoord: 155..166
IPR041991Eukaryotic Ribosomal Protein L27, KOW domainCDDcd06090KOW_RPL27coord: 37..119
e-value: 2.11227E-40
score: 129.226
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 33..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G11703.T1Cucsat.G11703.T1mRNA
Cucsat.G11703.T4Cucsat.G11703.T4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome