Cucsat.G11669 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G11669
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ras-related protein RABA1b-like
Location	ctg1820: 2870075 .. 2872853 (+)
RNA-Seq Expression	Cucsat.G11669
Synteny	Cucsat.G11669

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATATGTACAAAATTTCATAGTTTAGGTGTATTTTTCCGAAAACATAATTCCTTTGTTGATTTCACACTCTTCCCCCCCACTTGATTCTGCATTTCATTGTTTTTCACTTTCTTTTCTTTTTCTCACATTCATTCCTTCCTCTTCCCCTTCTCTGTTCTTCTTCCTCTTCTTCCTCTTCTTCCTCCATAAAGTTTGAGGTAAATCTAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTTTGATTGGGGACTCCGGCGTTGGAAAGTCCAATTTGCTCTCCAGATTTACTAAGAACGAGTTCAATCTCGAGTCCAAATCCACCATTGGTGTCGAGTTTGCTACCAGGACCTTGAACGTCGATGGCAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTTTTCTTTATTCTCTTTCCTTGGATTTCTCTTCTTTTCTTGCCTTCTCTTTCGTTTTCCCTTCCCTTGATTTCCCTCTCACTTGTTGCTTCTTTCCCTTTTCGATTCTGCTTTCTGCTTACTGTCTGCTCTGTTGATTTGAGTGTTCTGATTTCTGGGGTTTGGTTGAATAGCATGTTATTTTTCGTCTCGAGGGTTGTAATAACCTAGATCTGTAGGATGGCAACTGCGTTTTCCTCTCAATCTTGTGTTGTTCTGCTTTAATTCAGTGTTTTAATACTCGTTCAGTTCGTTTTCATATCTTCCTATTGTGTTATGTTGCGGCTTTGTTCTTCAGCTTCCATGACTGTGTACGTAATTTTGCTGTAAACTTAGATTCAGAAGGCATTGAAGAATTCATTTATTAGATGTTAATGAAGTAGTTGGGACTTGAGGACCCTTGTTGAGGAAGACTTTGGATTTCTTCTGTTTTGTAGATCGTGTGTTCTGAGCCATTTCTTTTTCTTTTTCCTTTCCTTTTTCCTTTTTTATTTTTTTATTTTAAAAAAACTCTTATAATTTATATTAGCGACAGAGAGTGGTTTGATTTTTTTCAATTATTCGTTTCCCTGTCTCCCGAGAAAAGTATAAAGGTATTTAGCTTCCTTCTACATGAATTCGTTTCCTGTTTTCCAAGAAGGGATTGATTTGAATAAAAAATGGAACCAAGATTTCATAATATTTCAATGAAATTTACAGGGTCTCATCACAACTACTGCAATTGATTTCCTATTGTAAGAGAAGCTTAAACTGGTGTTATAATTACTTAGAAGTACTTTAGAGCATCCTACTAACAAGTGAACCTATGTCATCTACTGGAATATTGTTGTTGTGTGTGGAGCTTTTGTCATAAGTTCTAGGGCTTCTATTCTTACTAGAACCTAAGGGTACCGTGTACAACTTATAGAACATATGTGTTGCTACTTGCTCCTAGTCTCCACTATTATGAATTTCTATTGTTTTTTGTGATATTAGCCCAAGCTCTCATAAATGGGAACCTTCTAAATATGGACTGTCTAGAAGAAATAAAGGTGTGAATTCTTAAAATTATAAAATCCTCACTACCACTTCTCAGCACTCTCCTTCCACAAAATAAGCATCTGACAAAGGAAATAAAATGATCTGCATGCAGTTCTTTATGAGTTTTCCAACTCTCTATTAACGGTTTTACTTTTTATTTTTGTTCTAAATGTAATGATGCCTATGAACGTTGTTAGTAAATTGCGATTTCTGTGGTGGGTTACAATTCTTTTTCTAATCAGTTGATAAGATCGCTTCTTTATTCATCAATACAATTCTGCTCTATTTCGATTGTACAATCTAGTTTACAATCTCACAGGTTTTCTTTAAGTTGAATGAGCTGTTCAGATCTTTGTGGCTTCTGTGTCTGTAGGTACCGCGCCATCACTAGTGCCTACTATCGTGGAGCGGTCGGTGCACTCCTTGTATATGATGTCACTCGCCATGCAACATTCGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTCGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCGACGGAAGATGGTAAGTCATATGCGGAGAGGGAATCACTGTACTTCATCGAAACGTCTGCACTAGAAGCAGTCAATGTGGAGAAAGCATTTGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCGCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCAGTAATAATCTGTGTAGGTGATTTTGAATTCGATGTACTGTGTAATATTTTTTTTCCCCCTTGAAGATGGTTAAGAAAGAGGAAGATATATCCCCCCAAGACCCTGAATCTTGCTGTATTACAGAAAAAGAGGAGTACCTGAGCCACATGATTGGTTTGTGGTTGCTGTTGTGTCCATCATTATTAGCTTCTACCCAAAAAGAAAAAAAAAAAAAAAAATCTTGGTTACAAGTTTGGTTTCTTTGGTAAATTTCCTCCATTTTAGCTTTATTTAAGCATTCATGATGTGCTATGATGATGAAGATGATGATGAACCCTTATATTCATTCATATGTTAAGTCAGTTATGATGGCTCTTTGAGCTGTGAACTTCATATTTGTAATAGTTTTACATTAAAGTTTTAATTCCATGCTTCAATTTTATTCAATTTATTCTGCCATGTTCTTTTAGGTTCAAATATATTTTAGGTTTGTGT

Coding sequence (CDS)

ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTTTGATTGGGGACTCCGGCGTTGGAAAGTCCAATTTGCTCTCCAGATTTACTAAGAACGAGTTCAATCTCGAGTCCAAATCCACCATTGGTGTCGAGTTTGCTACCAGGACCTTGAACGTCGATGGCAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGCGCCATCACTAGTGCCTACTATCGTGGAGCGGTCGGTGCACTCCTTGTATATGATGTCACTCGCCATGCAACATTCGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTCGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCGACGGAAGATGGTAAGTCATATGCGGAGAGGGAATCACTGTACTTCATCGAAACGTCTGCACTAGAAGCAGTCAATGTGGAGAAAGCATTTGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCGCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAA

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS

Homology

[Close]

BLAST of Cucsat.G11669 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVPTEDGKS+AERESLYF+ETSALEA NVE AF EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESG-LNRIKCCSS 218
           +AVE G++GS+S +P++G+ IN+K++S  L R  CCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Cucsat.G11669 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+AS VP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNAS-VP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Cucsat.G11669 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 6.0e-96
Identity = 174/218 (79.82%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++LN+DGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE   RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLV V TEDGK++AE+ESLYF+ETSALEA NVE AF+EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINI-KDESGLNRIKCCSS 218
           +AVE G+  S S VP+QG+ IN+ +D S LNR +CCS+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218

[Close]

BLAST of Cucsat.G11669 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.8e-95
Identity = 175/218 (80.28%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV T++ K  AERE LYF+ETSALEA NVE AF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVE G+ G+ S+ P +GE INIKDE S   +  CCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Cucsat.G11669 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-94
Identity = 175/217 (80.65%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 218
           KA+E GE+  +  VP++GEKI++ D S + +  CCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Cucsat.G11669 vs. NCBI nr
Match: XP_004137233.1 (ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Csa_015307 [Cucumis sativus])

HSP 1 Score: 429 bits (1104), Expect = 1.23e-151
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. NCBI nr
Match: XP_022982677.1 (ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related protein RABA1b-like [Cucurbita pepo subsp. pepo] >XP_038877813.1 ras-related protein RABA1b-like [Benincasa hispida] >KAG6600502.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031142.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428 bits (1101), Expect = 3.52e-151
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. NCBI nr
Match: XP_008451755.1 (PREDICTED: ras-related protein RABA1b-like [Cucumis melo])

HSP 1 Score: 428 bits (1101), Expect = 3.52e-151
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSASAVPAQGEKINIKDESGLNR+KCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. NCBI nr
Match: XP_022942927.1 (ras-related protein RABA1b-like [Cucurbita moschata])

HSP 1 Score: 427 bits (1098), Expect = 1.01e-150
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSAS+VPAQGEKINI+DESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. NCBI nr
Match: XP_022142868.1 (ras-related protein Rab11D-like [Momordica charantia])

HSP 1 Score: 426 bits (1095), Expect = 2.89e-150
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. ExPASy TrEMBL
Match: A0A0A0KXK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 5.95e-152
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. ExPASy TrEMBL
Match: A0A6J1IX83 (ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 1.70e-151
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. ExPASy TrEMBL
Match: A0A1S3BSA1 (ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 1.70e-151
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSASAVPAQGEKINIKDESGLNR+KCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. ExPASy TrEMBL
Match: A0A6J1FRL8 (ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE=4 SV=1)

HSP 1 Score: 427 bits (1098), Expect = 4.89e-151
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSAS+VPAQGEKINI+DESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS 217

[Close]

BLAST of Cucsat.G11669 vs. ExPASy TrEMBL
Match: A0A6J1CPC3 (ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 1.40e-150
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

The following BLAST results are available for this feature:

BLAST of Cucsat.G11669 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	1.7e-98	81.65	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q39222	2.2e-98	85.78	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]
Q40195	6.0e-96	79.82	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
Q01111	1.8e-95	80.28	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q9SN35	1.1e-94	80.65	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]

BLAST of Cucsat.G11669 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137233.1	1.23e-151	100.00	ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Cs...	[more]
XP_022982677.1	3.52e-151	99.54	ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related p...	[more]
XP_008451755.1	3.52e-151	99.54	PREDICTED: ras-related protein RABA1b-like [Cucumis melo]	[more]
XP_022942927.1	1.01e-150	99.08	ras-related protein RABA1b-like [Cucurbita moschata]	[more]
XP_022142868.1	2.89e-150	99.08	ras-related protein Rab11D-like [Momordica charantia]	[more]

BLAST of Cucsat.G11669 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK6	5.95e-152	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1	[more]
A0A6J1IX83	1.70e-151	99.54	ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4...	[more]
A0A1S3BSA1	1.70e-151	99.54	ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=...	[more]
A0A6J1FRL8	4.89e-151	99.08	ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE...	[more]
A0A6J1CPC3	1.40e-150	99.08	ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 54.63 coord: 14..35 score: 55.22 coord: 117..130 score: 53.64 coord: 37..53 score: 36.7 coord: 152..174 score: 41.61
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 4.5E-26 score: 102.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 2.0E-6 score: 37.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.4E-109 score: 380.1
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..217
None	No IPR available	PANTHER	PTHR24073:SF1156	RAS-RELATED PROTEIN RABA1B	coord: 1..217
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..175 score: 9.664
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.655708
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.70387E-127 score: 354.559
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 2.8E-12 score: 37.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 2.1E-61 score: 206.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 15.937025
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 3.0E-40 score: 135.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 1.8E-71 score: 241.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G11669.T1	Cucsat.G11669.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding