Cucsat.G11588 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACCTTGTTTGGGGGAAGGGTTATCATAACCCTTATTTAGGGTTTTATAACTCTTCCCCGTACACTTCTCAACTTGTCTCCCTCTCTTTCTTTCCTCTCAATCCTTTTTCAACTCCCCCATAACCCTACCTCTCTTTTCCTTAAGTCTGTTATAATCCCTCGCTAACCCTCCCTTAGTTCGAGTGTGAATTCCTCATTTTCGTTGGTTAGTTTGCTTTATCTTCACCGTTTTCATCTTTCACCGATTTGGTCTTCACCATTTTCTTCTTTCATTGTTTTTATCTCCACCGTTTTTGTCTTTACCTTTTTTGTCTTTATCGTTTCGGAGGTTGGTATCATATTTCCATTTTTTCAACTTTGGTTTTTGTCGTCCCCCATCGTTTTTGGGTTTCGTTGACTGGCTTCATTTTCTCCACTTGAGACCTCTGAAACCCTTACCTGGACGAACTTGGGTTCGTTGCATGGCTGGTTTTCTAAGCTTGTTGCTCAGGCTTCTCATTCACACTCAAACTTCCCCTTGCCAGTCAAACTTCCCCTTGTCAATTAGGGTTCCTCTTTACTGACAATTGAGAGATGCTACATTCGTTCGACAGTGGAATGTTTCGAGCAAGGTAGTGATGAAGGTAATGTTTTCCCTATTGTTTTCCCTATTGTTTCCTTAATGTCGATGATAAGGTCCTCAATTGATTTTTTATATGATCGATGTCCATACTTGTATTATATTCATATGTTATTTGTCTATGCTTTGAATCTGTTAATTCTAATTTTCATTCTCACGAATTTGTTTTCATGTTTGATGTTGTTGTATAATTCCAATTTTCTTATACACATCTTATAGCAATACTGCTATTGACTGTATACTGAATACTTTTCGATTTTCCATTACAATATATTTTTGTATATTTGTTTTCTATGTGTTCTAATGTTGTTGTCCCTTCATTCATGTGTATGCACAATATTTTTATTATGTGGTCTGACTGCTGCAATTGGGTTTTGACTAACTTTTATGGTTACCTAATTTATCTTTTTCCCTCTAGTTTGTGTTGTCTTTTCCATTGTCATAAATCTTGCTCAGATTTTCTTGTTTAGTGGTCTTTAATGCATCGTTAAATTTGTCCATGACCATCTAAATAAACGTGTCATTGCATTCTGCCTTCGATGTGTTTTGTCCTCGGTTCATCTGCATAGCACCTCCCATTTCCATCTTTTTTGGTATGTCTATGCATCCATGCTGTTTGTATTCTTTTGTGTGTGTTTTAAAATCATCTCTACTTCTGTATTTGTCAATAACATTTATTGAAGTTGCAATCCCTGTTAGGGCACTTTTTGTAGTTTGTTTGCGTGCCTTTCATATCACCTCTGTTCTACTAGTGCATATTTGAAGCCTTGTTTCCATTATTTGGTGTTCATCATTATGCTTTTCGTATCACCACATTTCCTAGCATTGCATATGTGAAGACATTTGTTCTGCTTCATGAAATTCGATTTCAAATTATTGAACGAATTTCCTTCCTTTGAGGCACCAAATATTTTTCCTTCATTTACGTGCATTTTTCCGGATTATTATTAACGGTTTTTTCATTTGTCTATCGTATGGGTTTTTTCATCGATAGGGAACGATATTTGTTCGCAAACCTTTTTATTTTTTTTCCCTCCATCCACCAAGAATGTCTGCCACTAATATTTATTTTATCTTTTTGTTATGCAATTAGCCTATGTTGGTAATCTGAACTTCCGAGGCACTAGGGTTTCTATGTATTTAAGTACTTTAATTTATTTTGTTCGGCATATGTTTTTCACTTATAACATTGTAATACATACTAAATGTTACCGAAAAACACTAGTACTGTCAACTTTGTATGTGGACTTTCATAAATTTTTCTAATGTACTTTATAAACATATTTTTCATGTCTTCGATGCATGTTACATGCTTATGTCTATTTTCAAAAGTTATCATTTCCAAAGTAAGCACATTTTTCTATCCAAAGAACTATGACCTTTATAATCGTCTTACCAAATGATCACTATTTTGTTTATTCAACTTCATCTATCTTTAAAAAGATGGAACGTGAATATATCTTATAATGCAAGTTGTTTTCCAAAATATTTTTTTTTACATTGTGTTAGGCTTTTTATATTATACTTCGTGGTTCATCGTATCTTTTGTATTAGTACTTTTTTCATTATGGTGTACTTGAAAATATAACTTCGAGTCCCTAAAAGAAAATGAATTGAACGTCAACACTGAATATGGAACAACTATTTATGTCACTAGTTTTGAAGTCACATGGTTCTTTCCAAATATGCTTTCAAAGTACCCTATTTTTAACCTTCATTCAACATTTGGTATATGCGTACAAAAGGTTCATATTCTATTTTAGTTTATATTTTTCTTGTGAAAACGAGTGGAGCTCAATAATTAGTCACACAACTTATAATTAATAAAGCGTTTAAATTTAAACATATCACTCATAAAAAGCATCGTCTCTTGAACACACGTACACACTGTGTATGATTTTCAAATCTATTTACTACAATATGAGACGTACGCTCCCATCCCCTATTCCTCAAACTATCTAATAGTCTAAGTACTTTAGCAAGTTCTCATTTTATAGCATGAAATGGATTCAGCAGAGCTTCCTGCAAAACTAATAGTCTTCACAATCTCTCAACGTCAGTTACTAATGACGTTGGAAGAATTAATGAATGACCGCAAGAGGTTAACACAAACACCTTGGAATAAAATTAGGTAGCTAGCGTACTTTTGACCTTGTCTGTCGTCAAAGTACAAGAATGGACAGAAAATGTTTTGCCATTCTATGCCACCTACTGAGAACAAATGTCGGATTAGCATTGACAAAAATCATCGATGTAGAGGAGATGGTTGCTATGTTCCTCCACGTGCTGGCCCACGATGTGAAGAACCCAGTGATCCAATTTGAGTTTGTTCGGTCTAGTGAGACAATTTCATGGCATTTCAACTAGTTTTGTTGGTCGTCTTACGTCTGCATGGTGAATTGTTGACAAAACCACAACCAGTCACGAGCACATGCACAAATTCACATTGGCGGTGTTTCAAGGTTTTGGTTTGTTGTATTGGGTTTAATTGAAAGATCAAATTTTGATGTTTTGATTCAACGTTTCGTATACACTACAAAATTGCCTCGGTGCACTAGACGAACATGGCGGCAACTGATCGCCCTAGGTATAGAACACATAAGGACGAAGTTGCCACAAATGTCCTTGACGTATGCGACACGAAAAGACATTTCGTATTTGTTTTAGTTGGTTGGGAAGGATCCGTAGTTGACTCGTGCATCTTTCGAGATGTTATTTCAAGATCTAACAAACTGAAGGTTCCAAAGGGTAACCACAACTACTACTCCATTAAATGTTATTTAAAATTCATGTAATTACATAACTTAACACTGTTAATGTTAAGATAGAGTATTATTGCCTATGCGATGCGGGGTACCCTAATGCGGAGGAATTTCTGGCTACCTACAAAGGACAAAGATACCACATGTAGGAGTGTCGTGGAGTTGGAAATGCACCAACAATAGTGAAAGAGTTCTTTAACATGAAGCATTCTTCCGCACATAATGTTATTCAAAGAGCTTTTGGTCTATTAAAGGGTCGATCGACATCCTCCACAGAAAGTCCTACTACCTCGTTCAAGTCAAACGTCGCACGATTCTGGCGTGTTGTCAGCATAATCTCATAAACAGAGAGATGACGAACGATGATATTTTAGAGGACATTGATGAAGGGGACTTGATCTACGGAGTTAGTAGAGGAATGACTTAGCCAAAGAGATATTCAGTGAATGAGAGTTGCGTAATCATTAGTACCCATTGTGTTACAGCAGTATCATGTTATTTTAATTTTTTTAATATTGAAACTCTTGTTGTATGTGTTTATGAACGAAATTAATGAAACACTAACCCATGACACGATACGAAGATTTTATTTTTTCCCATGTGTGTAATTATTCTCTAATAATTGACTTACAATTTCTTTTTCTTCCAATTCTTTGTCAGTATGACTAGTACGTCAAGGGCCCCGAAACATCTGTAGAATAAGGAGGTCTTGGTGAACGTGGGAGGCTGGAGGTCAGACAATGGAACGTTCAAACCCATACCTAGCACAATTGGTTAGAATGATGGTGGACAAGATGCCATGATGCATTGTCAAAACAACCACTTGTTACAGAAAGTCGGATAAAGTCTTTGAAGAGAACAATCTAGGAAATTGCTTAAATACAAGGCTTAGCATGTAATGGGTTTGAATGGAATGACGATGCTATGTGTATAATTGCTAAGAAGGACGAGTTTGACAGTTGGGTCAAGGTAGGGAAATAAGTATACGTGAACCACTATTCGCTTCTAATGGTATTGAAAGCTGACAATTATTTTTTATTCCATTCACAAACCCATCTTGCAACGAAGGGCTCCTAAACAAGCATTTCCCCAATTACAACGAATTATCGTATATGTTCAGGAAAGATTGTGTAACGAGGGCACGTGTAGAGACATTCATCGATGTTGGGTCCAATAAATCGGGTGAGTACGAGGGATTTCCACATGAAGATGGAATCGATATGGAGATTCCTACTATGTACAGCCAAGGCCTGAACATGTTGCCTGAGGACGTAATGGACGCACGACATGGTCGATCAAGTGACTGTAAACTGGGTTCGAGTGGATCAAAGAGGAAGTGGGGAGGACAAAATATGGACATTGTGGACGTCATTCGCGATGTCAATGGAATTTTCAAATTACCCGCTGAGGGCCATTGCGGATTGGCAGAAGTTAGTTATGCAGGATGAAAGCGCAACCCATGGAAAATTCATTCGACAGTTGCAAGCTATCCCAAGGCTGAGTAGATTGGACAAGGCGTGCTGTATGCGAATAATGGCAGGCTACTTTTTCGACATGAAAGCATTTTTTAACGTACTCGAGGACATGAAGATGGACTACTGAACGATCATTCTACAAGATAACTCATGACAATTAGTCAAATTCCATCACTTGACCCGTGTTTTTTTTTTTTTTTTTGCTTATGCATTATGTTCTCTATATTTGACTTCAGTTTATAACTCCCTTGCACCAAATATTTTTGCACCAAATATTTTGCGCAACGATATCGTTTGGTTTAACTGATTTTTTTTTCTAGTACATTGTATAAAATAATTGTTATTTGTGT ATGTTCAGGAAAGATTGTGTAACGAGGGCACGTGTAGAGACATTCATCGATGTTGGGTCCAATAAATCGGGTGAGTACGAGGGATTTCCACATGAAGATGGAATCGATATGGAGATTCCTACTATGTACAGCCAAGGCCTGAACATGTTGCCTGAGGACGTAATGGACGCACGACATGGTCGATCAAGTGACTGTAAACTGGGTTCGAGTGGATCAAAGAGGAAGTGGGGAGGACAAAATATGGACATTGTGGACGTCATTCGCGATGTCAATGGAATTTTCAAATTACCCGCTGAGGGCCATTGCGGATTGGCAGAAGTTAGTTATGCAGGATGA MFRKDCVTRARVETFIDVGSNKSGEYEGFPHEDGIDMEIPTMYSQGLNMLPEDVMDARHGRSSDCKLGSSGSKRKWGGQNMDIVDVIRDVNGIFKLPAEGHCGLAEVSYAG Homology
BLAST of Cucsat.G11588 vs. NCBI nr
Match: KAA0060529.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK00769.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 2.44e-22 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of Cucsat.G11588 vs. NCBI nr
Match: KAA0061395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14749.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 2.62e-20 Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Cucsat.G11588 vs. NCBI nr
Match: KAA0051415.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22229.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 87.4 bits (215), Expect = 2.16e-19 Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Cucsat.G11588 vs. NCBI nr
Match: KAA0048148.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK08106.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 87.8 bits (216), Expect = 6.75e-19 Identity = 44/89 (49.44%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Cucsat.G11588 vs. NCBI nr
Match: KAA0056167.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 1.81e-18 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Cucsat.G11588 vs. ExPASy TrEMBL
Match: A0A5A7V469 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00340 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.18e-22 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of Cucsat.G11588 vs. ExPASy TrEMBL
Match: A0A5D3CX17 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00870 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.27e-20 Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Cucsat.G11588 vs. ExPASy TrEMBL
Match: A0A5D3DG43 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001240 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.05e-19 Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Cucsat.G11588 vs. ExPASy TrEMBL
Match: A0A5A7TYU4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002690 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.27e-19 Identity = 44/89 (49.44%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Cucsat.G11588 vs. ExPASy TrEMBL
Match: A0A5A7UNI7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00630 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 8.79e-19 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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