Cucsat.G11415 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G11415
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Stromal cell-derived factor 2-like protein
Location	ctg1798: 830043 .. 832952 (-)
RNA-Seq Expression	Cucsat.G11415
Synteny	Cucsat.G11415

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAAACCACGCCGAAGTCTTTCTAATTTAATTCATTTATTTGTCTTCACAAAGGAAATTAAAAGAAAGAAAGAAAATGATTTAAATCCCAATTCTCAGTTTTCTCACCGATCGAACCAAAAATCGGAGTCCATTTTTTTCGATTGTACGTCGTCGTTTTTGTGGTGAGTTACTCCGATCAACCGTGGCTTCTTCAGGGTCCTCGGGTCTGTCTCGGAGAAAACCTTCGGCTTCTGCTTCTTCTCCATCCTCAGCGTCGACGAGGATCGTCTACAGGGAGAGAGTTCCGCCGTCGCATTCCGATTTGCCTTTCTGGCAGCGTAATTGGTTCATCGCCTTGCTTTTCGTTATGGCCATTGGTTTCTTCGCTCTTGCGCTCTTTCTCTTTCTCGGTCTCGATCTCGACCATGGCTCCCCGTCATCTGCCTCTGCTGCGTCCTCCGAGGGCGTTGAGGTTCGAATCAGCTAACCTTTTTTATGAGCTTTGTTCGTGTTTGCGCTGGATTATCTCTGATTAGAAATCTAGGTCATTAGCTCACCATGTAGATAATTGATGAAGACACGACGAGATTGGAATGAAATAGGAAATAGTATGAGTAACGTGTGATGGAATCGATAATGTTGGTTCGATTTGAACTTAGGAGCGTGGAAGTTGAGAGAAATTCACTTAAGAAGATGGATTTTCTTTCTGGAGATTCTATGCTTGGTTTAGAACTGATCAAATGTAATGATTGAGAGAAGATATAATGATTAATGAGTGAGGAAAACAGCAATGTGGATTCGAATTGAACTTATAAGCATGAAACTGAAGGAATCTGCTCAAACGTAGATAAATAATTAGTTGGAAATCGCCTAAACTTTTTTAAGATTGTATTCTATTTACTGAAAATTTCCACATGAATCCATCTCTTATGCATATCTTGATTAGCTTTCCTGTTATTTCGTTATCTTACTGCGGTTAAACGGAGCTTAATTTGAGTAATTGATTCCTTCAATTGAACCATTTTGTTTATTGGTGCCTTTGTTGGACAGATTACTTACGGGTCAGTTCTTAAGTTAATGCACGAGAAAACTAAATTCCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACTGGGTTTCCAAATGTTGAAGATTCCAACAGCTACTGGGTAAATCTCTCTCCTTTGCTTTTCTTTTCAACAAAAATTGTTAACAGTCAAATAGATGGTTACTCTTCTTATTGCTGGTTGATTTGGTGACGAATGTTGGTGTTGACTTTCAATCTAACGAGTTTATCATTGGCAGATTGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGAGACACTATTAAAAGTGGTACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCACATGCATGCGTCCCCAATATCGGGAAATCTAGAGGTAATTGCATTGTAACATTCATTTTTATCAATTTTTTTACTGGATGATCTCATGATAATATGTTGGTTGTAACATTCATTTCACGCATCCCTTTGTGTTTGCTCATTGGTTTGATGTTTCTCTCGTATTTTACGTTGGTTGCTTGTGTTGATTTCATGATGACTGAATTCATAAAGAAAGCTCAACACTGCCATAACTTAACGGCATTAACTGGCCAAAGTGAGTTTTGGCATTTGCCTAACCTTCGTCCCTAAAGGTTGGAGGTTCGATCCTCCACCCACCATTGCTTTACCTCAAACACAAAATTGAAGGGCATTAATCAAGGCCAGTATTTGTTGTTTGGTGGAGGAAGAAAGTTATTAACCTGTTTGCAGGCGTGGAATTATATTCCTGAGAATTCAGTTATTAAAGTTAACAAAGGAAACCATCGTGGACCATACGTGGTTCATATTGTAGAACTAATACGAGATCTCTCATTTATCTTTTACTTGCACGAACTTTCCTAGTATATGAATTTGCCTTCAGAATGTTCGGTTCATTTAGATGTACATATAAGACTGTATTTCTGGCATTTAACAGATTTCAAAGATTGTTGGTTGAGTATTTTATTCTGCTATTAGGAATATTTGTTCTGGGCTAGATTATGTTGTTATTGTATTTTCCAAAGAAACCAAGTTCGAGGTAGACAATCGACATAATATTTTACACAACAATGGTTTTTCAAAAATTAATCCATTGTATGATATTATTGTCATCTGACATCCCTCTTCCCATCACTCTTCCCACGTTTTTATAATCGTTTCATTTTTCCTCCATTCATGCAATGGTTTTCCATTGGCAATTACTACACCTTTTCTGTTTTGACTTGTATCTGAGTTTCCTTAAACGGTGTGAATTGTGGTTCACTGTTTGACTTGTTTTGGCAATTGGCTTGTTTGATATGCACACCTCGCTGTATGACTATGGGATTTGAGGACTTTAGTCTTGTATTAGTGGTCACGAGATGCGAGAATTCTGGGCTTTGTAATGATAATGGATTGTGGGTTACACAGTCAACAAACCTTAGTCCAATTGTGAAGGAGAGGGCCATGAACTCAATTTTGTATACTATGTCATATGGTTACAGAACAATAGAAATTTGATTTTGAAGTCGAATTATGGTCTATGTTTGCTGATAGTTCTAGATTCCTTGGTGCAGGTTAGTTGCTTTGGTGGGGATGCTGACTCCGACACTGGTGATTACTGGAGGTATGATAATTATTTTCTCTAAAAACACATTATTGTTGTTGTTGTTATTACACATACACATTATTAGTTCCTCACCTGCAAAAGTCGTATAGGCTTATGATCGAAGGAAGTGGAAAGACATGGAAGCAAGAACAGAGAGTTCGGCTTCAGCACATCGATACCAGTGGCTACCTACATAGCCATGACAAGAAATACAGCCGTATTGCTGGAGGGCAGCAGGAGGTGAATAACAAATGATTATCTCAATAAATCAGTTAATGCAAACATCGTATGCTACTCATTTGGAAGCAACAATTCGAATTCCAACCACCACTTTCTTTGCCTTTGCAGGTCTGCGGAGTCCGGGAGAAACGTGCTGACAATGTCTGGCTGGCTGCGGAGGGTGTTTATCTTCCTGTTACGGAGACGAAGTAGAACCATTTTGGTAAGGTAACCATGTACTTAACTTTCAAAATTAGGTTACTAGGGTTTTTGAAATATTGAGAGAGATCGTTACATGTTTTACATGAAGTTGAGCTGATTCCTTAACTCGAGATCGGTCATTGAAGTCATGACGTTATTTGGACAAAATGTCATCAGGATATGTTCTATAGGTTGTATAATTGTGTCTTTTGAGTTCTAAAGAATGGTCTACGATGAAGTCCATAGATTGTTGCTATTCATTGATAATATGTTACCATTACTTGGG

Coding sequence (CDS)

ATGGCCATTGGTTTCTTCGCTCTTGCGCTCTTTCTCTTTCTCGGTCTCGATCTCGACCATGGCTCCCCGTCATCTGCCTCTGCTGCGTCCTCCGAGGGCGTTGAGATTACTTACGGGTCAGTTCTTAAGTTAATGCACGAGAAAACTAAATTCCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACTGGGTTTCCAAATGTTGAAGATTCCAACAGCTACTGGATTGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGAGACACTATTAAAAGTGGTACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCACATGCATGCGTCCCCAATATCGGGAAATCTAGAGGTTAGTTGCTTTGGTGGGGATGCTGACTCCGACACTGGTGATTACTGGAGGCTTATGATCGAAGGAAGTGGAAAGACATGGAAGCAAGAACAGAGAGTTCGGCTTCAGCACATCGATACCAGTGGCTACCTACATAGCCATGACAAGAAATACAGCCGTATTGCTGGAGGGCAGCAGGAGGTCTGCGGAGTCCGGGAGAAACGTGCTGACAATGTCTGGCTGGCTGCGGAGGGTGTTTATCTTCCTGTTACGGAGACGAAGTAG

Protein sequence

MAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

Homology

[Close]

BLAST of Cucsat.G11415 vs. ExPASy Swiss-Prot
Match: Q93ZE8 (Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana OX=3702 GN=SDF2 PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.1e-88
Identity = 155/191 (81.15%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 89  MAIGFFALALFLFLGLDLDHGSPSSASAAS-SEGVEITYGSVLKLMHEKTKFRLHSHDVP 148
           MA+GFF LA+FL+L LD D G  S+++AAS  EGVEITYGS +KLMHEKTKFRLHSHDVP
Sbjct: 1   MALGFFCLAIFLYLSLDPDSGYTSASAAASGKEGVEITYGSAIKLMHEKTKFRLHSHDVP 60

Query: 149 YGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHM 208
           YGSGSGQQSVTGFP V DSNSYWIV+P PGT+ KQGD +KSG  IRLQHM+TRKWLHSH+
Sbjct: 61  YGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHL 120

Query: 209 HASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKK 268
           HASPISGNLEVSCFG D +SDTGD+W+L+IEGSGKTWKQ+QRVRLQHIDTSGYLHSHDKK
Sbjct: 121 HASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKK 180

Query: 269 YSRIAGGQQEV 279
           Y RIAGGQQEV
Sbjct: 181 YQRIAGGQQEV 191

[Close]

BLAST of Cucsat.G11415 vs. ExPASy Swiss-Prot
Match: Q54P23 (Stromal cell-derived factor 2-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284847 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.2e-37
Identity = 80/161 (49.69%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 123 EITYGSVLKLMHEKTKFRLHSHDVPYGS---GSGQQSVTGFPNVEDSNSYWIVRPQPGTS 182
           ++TYGS++KL H  T FRLHSH V YGS   GSGQQSVTGFP  +D+NS W+++   G  
Sbjct: 31  KVTYGSMVKLAHVPTNFRLHSHKVSYGSSGGGSGQQSVTGFPENDDTNSLWVIKGPHGNR 90

Query: 183 AKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLEVSCFGGDADSDTGDYWRLMIEG 242
             QG  +K+G IIRL H  T+K LHSH+  SP++   EVSCFG + + DTGD W +  E 
Sbjct: 91  VLQGTVVKNGDIIRLVHSNTKKNLHSHLAVSPLTKQNEVSCFGENGEGDTGDNWIVETE- 150

Query: 243 SGKTWKQEQRVRLQHIDTSGYLHS-HDKKYSRIAGGQQEVN 280
           SGK W + Q VR +H DT  YL +    KY     GQ E++
Sbjct: 151 SGKEWMRGQVVRFKHADTKTYLQAIESAKYQNPIPGQIEIS 190

[Close]

BLAST of Cucsat.G11415 vs. ExPASy Swiss-Prot
Match: Q99470 (Stromal cell-derived factor 2 OS=Homo sapiens OX=9606 GN=SDF2 PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 5.0e-34
Identity = 80/167 (47.90%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 113 SASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVEDSNSYWIV 172
           SA  ASS GV +T GSV+KL++ +   RLHSHDV YGSGSGQQSVTG  +V+DSNSYW +
Sbjct: 14  SAVGASSLGV-VTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVDDSNSYWRI 73

Query: 173 RPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLEVSCFGGDADSDTGDY 232
           R +  T  ++G  IK G  IRL H+ T + LHSH   SP+SGN EVS FG + + D  D 
Sbjct: 74  RGKSATVCERGTPIKCGQPIRLTHVNTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDD 133

Query: 233 WRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAGGQQEVN 280
           W ++   +G  W ++  VR +H  T   L    ++Y R   GQ+EV+
Sbjct: 134 WTVLC--NGPYWVRDGEVRFKHSSTEVLLSVTGEQYGRPISGQKEVH 177

[Close]

BLAST of Cucsat.G11415 vs. ExPASy Swiss-Prot
Match: Q9DCT5 (Stromal cell-derived factor 2 OS=Mus musculus OX=10090 GN=Sdf2 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.2e-33
Identity = 78/167 (46.71%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 113 SASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVEDSNSYWIV 172
           SA  AS+  V +T GSV+KL++ +   RLHSHDV YGSGSGQQSVTG  +V+DSNSYW +
Sbjct: 14  SAVGASNMAV-VTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVDDSNSYWRI 73

Query: 173 RPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLEVSCFGGDADSDTGDY 232
           R +  T  ++G  IK G  IRL H+ T + LHSH   SP+SGN EVS FG + + D  D 
Sbjct: 74  RGKTATVCERGTPIKCGQPIRLTHINTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDD 133

Query: 233 WRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAGGQQEVN 280
           W ++   +G  W ++  VR +H  T   L    ++Y R   GQ+EV+
Sbjct: 134 WTVLC--NGPYWVRDGEVRFKHSSTDVLLSVTGEQYGRPISGQKEVH 177

[Close]

BLAST of Cucsat.G11415 vs. ExPASy Swiss-Prot
Match: Q9ESP1 (Stromal cell-derived factor 2-like protein 1 OS=Mus musculus OX=10090 GN=Sdf2l1 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 9.4e-33
Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 0


Query: 98  LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 157
           L L L L +  G  S ASA       +T GSVLKL++   K RLHSHD+ YGSGSGQQSV
Sbjct: 15  LGLLLALSVRSGGASKASAGL-----VTCGSVLKLLNTHHKVRLHSHDIKYGSGSGQQSV 74

Query: 158 TGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLE 217
           TG    +D+NSYW +R        +G  ++ G  +RL H+ T K LH+H   SP+S N E
Sbjct: 75  TGVEESDDANSYWRIRGGSEGGCPRGLPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQE 134

Query: 218 VSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAGGQQE 277
           VS FG D + D  D W   +  SG+ W++E  VR QH+ TS +L    ++Y     GQ E
Sbjct: 135 VSAFGEDGEGDDLDLW--TVRCSGQHWEREASVRFQHVGTSVFLSVTGEQYGNPIRGQHE 189

Query: 278 VN 280
           V+
Sbjct: 195 VH 189

[Close]

BLAST of Cucsat.G11415 vs. NCBI nr
Match: KAG7037641.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 478 bits (1229), Expect = 3.49e-168
Identity = 236/253 (93.28%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 27  GELLRSTVASSGSSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPFWQRNWFIALL 86
           GE  RSTVASSGSSGLSRRKPS+SAS P S  TRIVYRERV PSHSDLPFWQRNWFIALL
Sbjct: 27  GEFFRSTVASSGSSGLSRRKPSSSASPPPSTPTRIVYRERVSPSHSDLPFWQRNWFIALL 86

Query: 87  FVMAIGFFALALFLFLGLDLDHGSPSSASAASS-EGVEITYGSVLKLMHEKTKFRLHSHD 146
           FVMAIGFFALALFLFLGLDLDHGS SSASAASS EGVEITYG+VLKLMHEKTKFRLHSHD
Sbjct: 87  FVMAIGFFALALFLFLGLDLDHGSLSSASAASSSEGVEITYGTVLKLMHEKTKFRLHSHD 146

Query: 147 VPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHS 206
           VPYGSGSGQQSVTGFPNV+DSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHM+TRKWLHS
Sbjct: 147 VPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMKTRKWLHS 206

Query: 207 HMHASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHD 266
           H+HASPISGNLEVSCFGGD+DSDTGDYWRLMIEGSGKTWKQEQRVRLQH+DT+GYLHSHD
Sbjct: 207 HLHASPISGNLEVSCFGGDSDSDTGDYWRLMIEGSGKTWKQEQRVRLQHVDTNGYLHSHD 266

Query: 267 KKYSRIAGGQQEV 278
           KKYSRIAGGQQEV
Sbjct: 267 KKYSRIAGGQQEV 279

[Close]

BLAST of Cucsat.G11415 vs. NCBI nr
Match: KAA0064593.1 (stromal cell-derived factor 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 460 bits (1183), Expect = 1.07e-161
Identity = 229/245 (93.47%), Postives = 235/245 (95.92%), Query Frame = 0


Query: 38  GSSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALA 97
           GSSGLSRRKPSASASSPSS  TRIVYRERVP SHSDLPFWQRNWFIALLFVMAIGFFALA
Sbjct: 2   GSSGLSRRKPSASASSPSSVPTRIVYRERVPSSHSDLPFWQRNWFIALLFVMAIGFFALA 61

Query: 98  LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 157
           LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV
Sbjct: 62  LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 121

Query: 158 TGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLE 217
           TGFPNV+DSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSH+HASPISGNLE
Sbjct: 122 TGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLE 181

Query: 218 VSCFGGDADSDTGDY----WRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAG 277
           VSCFGGD+DSD+  +    +RLMIEGSGKTWKQEQRVRLQHIDT GYLHSHDKKYSRIAG
Sbjct: 182 VSCFGGDSDSDSVPHLQKLYRLMIEGSGKTWKQEQRVRLQHIDTGGYLHSHDKKYSRIAG 241

[Close]

BLAST of Cucsat.G11415 vs. NCBI nr
Match: KAG6608288.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461 bits (1185), Expect = 1.18e-161
Identity = 226/241 (93.78%), Postives = 234/241 (97.10%), Query Frame = 0


Query: 39  SSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALAL 98
           SSGLSRRKPS+SAS P S  TRIVYRERV PSHSDLPFWQRNWFIALLFVMAIGFFALAL
Sbjct: 28  SSGLSRRKPSSSASPPPSTPTRIVYRERVSPSHSDLPFWQRNWFIALLFVMAIGFFALAL 87

Query: 99  FLFLGLDLDHGSPSSASAASS-EGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 158
           FLFLGLDLDHGS SSASAASS EGVEITYG+VLKLMHEKTKFRLHSHDVPYGSGSGQQSV
Sbjct: 88  FLFLGLDLDHGSLSSASAASSSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 147

Query: 159 TGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLE 218
           TGFPNV+DSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHM+TRKWLHSH+HASPISGNLE
Sbjct: 148 TGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMKTRKWLHSHLHASPISGNLE 207

Query: 219 VSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAGGQQE 278
           VSCFGGD+DSDTGDYWRLMIEGSGKTWKQEQRVRLQH+DT+GYLHSHDKKYSRIAGGQQE
Sbjct: 208 VSCFGGDSDSDTGDYWRLMIEGSGKTWKQEQRVRLQHVDTNGYLHSHDKKYSRIAGGQQE 267

[Close]

BLAST of Cucsat.G11415 vs. NCBI nr
Match: KAG6591542.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456 bits (1173), Expect = 9.83e-160
Identity = 223/257 (86.77%), Postives = 238/257 (92.61%), Query Frame = 0


Query: 22  RRRFCGELLRSTVASSGSSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPFWQRNW 81
           RRR  GE  RSTVASSGSSGLSRRK SASAS+P  A TRIVYRERVPPSH DLPFWQRNW
Sbjct: 18  RRRVFGEFFRSTVASSGSSGLSRRKQSASASTPPPAPTRIVYRERVPPSHPDLPFWQRNW 77

Query: 82  FIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRL 141
           FIALLFVMAIGFF+LALFLFLGLDL  GSPSSASAASSEGVEITYG+VLKLMHEKTKFRL
Sbjct: 78  FIALLFVMAIGFFSLALFLFLGLDLHQGSPSSASAASSEGVEITYGTVLKLMHEKTKFRL 137

Query: 142 HSHDVPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRK 201
           HSHDVPYGSGSGQQSVTG+PNV+D+NSYWIVRP+ GTSAKQGD IKSGTIIR QHM TRK
Sbjct: 138 HSHDVPYGSGSGQQSVTGYPNVDDANSYWIVRPELGTSAKQGDPIKSGTIIRFQHMGTRK 197

Query: 202 WLHSHMHASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYL 261
           WLHSH+HASPISGNLEVSCFG D++SDTGDYW+L+IEGSGKTWKQ QR+RLQH+DT GYL
Sbjct: 198 WLHSHLHASPISGNLEVSCFGDDSNSDTGDYWKLVIEGSGKTWKQGQRIRLQHVDTGGYL 257

Query: 262 HSHDKKYSRIAGGQQEV 278
           HSH+KKYSR AGGQQEV
Sbjct: 258 HSHNKKYSRTAGGQQEV 274

[Close]

BLAST of Cucsat.G11415 vs. NCBI nr
Match: KAG7024427.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 443 bits (1139), Expect = 4.96e-154
Identity = 224/285 (78.60%), Postives = 239/285 (83.86%), Query Frame = 0


Query: 22  RRRFCGELLRSTVASSGSSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPFWQRNW 81
           RRR  GE  RSTVASSGSSGLSRRK SASAS+P SA TRIVYRERVPPSH DLPFWQRNW
Sbjct: 24  RRRVFGEFFRSTVASSGSSGLSRRKQSASASTPPSAPTRIVYRERVPPSHPDLPFWQRNW 83

Query: 82  FIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRL 141
           FIALLFVMAIGFF+LALFLFLGLDL  GSPSSASAASSEGVEITYG+VLKLMHEKTKFRL
Sbjct: 84  FIALLFVMAIGFFSLALFLFLGLDLHQGSPSSASAASSEGVEITYGTVLKLMHEKTKFRL 143

Query: 142 HSHDVPYGSGSGQQSVTGFPNVEDSNSYW----------------------------IVR 201
           HSHDVPYGSGSGQQSVTG+PNV+D+NSYW                            IVR
Sbjct: 144 HSHDVPYGSGSGQQSVTGYPNVDDANSYWVNLSPSSSYSFCGTNVVICFVPPIMLVLIVR 203

Query: 202 PQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLEVSCFGGDADSDTGDYW 261
           P+ GTSAKQGD IKSGTIIR QHM TRKWLHSH+HASPISGNLEVSCFG D++SDTGDYW
Sbjct: 204 PELGTSAKQGDPIKSGTIIRFQHMGTRKWLHSHLHASPISGNLEVSCFGDDSNSDTGDYW 263

Query: 262 RLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAGGQQEV 278
           +L+IEGSGKTWKQ QR+RLQH+DT GYLHSH+KKYSR AGGQQEV
Sbjct: 264 KLVIEGSGKTWKQGQRIRLQHVDTGGYLHSHNKKYSRTAGGQQEV 308

[Close]

BLAST of Cucsat.G11415 vs. ExPASy TrEMBL
Match: A0A5A7V8Z2 (Stromal cell-derived factor 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003150 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 5.20e-162
Identity = 229/245 (93.47%), Postives = 235/245 (95.92%), Query Frame = 0


Query: 38  GSSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALA 97
           GSSGLSRRKPSASASSPSS  TRIVYRERVP SHSDLPFWQRNWFIALLFVMAIGFFALA
Sbjct: 2   GSSGLSRRKPSASASSPSSVPTRIVYRERVPSSHSDLPFWQRNWFIALLFVMAIGFFALA 61

Query: 98  LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 157
           LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV
Sbjct: 62  LFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSV 121

Query: 158 TGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHMHASPISGNLE 217
           TGFPNV+DSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSH+HASPISGNLE
Sbjct: 122 TGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLE 181

Query: 218 VSCFGGDADSDTGDY----WRLMIEGSGKTWKQEQRVRLQHIDTSGYLHSHDKKYSRIAG 277
           VSCFGGD+DSD+  +    +RLMIEGSGKTWKQEQRVRLQHIDT GYLHSHDKKYSRIAG
Sbjct: 182 VSCFGGDSDSDSVPHLQKLYRLMIEGSGKTWKQEQRVRLQHIDTGGYLHSHDKKYSRIAG 241

[Close]

BLAST of Cucsat.G11415 vs. ExPASy TrEMBL
Match: A0A445KWC9 (Stromal cell-derived factor 2-like protein OS=Glycine soja OX=3848 GN=D0Y65_008927 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 1.80e-143
Identity = 210/255 (82.35%), Postives = 227/255 (89.02%), Query Frame = 0


Query: 33  TVASSGSSGLSRRKPSASASSPSS---ASTRIVYRERVPPSHSDLPFWQRNWFIALLFVM 92
           TVASSGS  LSRRKPS+S+SS S     STRIVYRE   PS SD P WQ+NWFIALLFVM
Sbjct: 79  TVASSGSQNLSRRKPSSSSSSSSQQTPGSTRIVYRESRIPSESDFPIWQQNWFIALLFVM 138

Query: 93  AIGFFALALFLFLGLDLDHGSPS----SASAASSEGVEI--TYGSVLKLMHEKTKFRLHS 152
           A+GFFALA+FLFL LD D    S    SASAASSEGVE+  TYG+VLKLMHEKTKFRLHS
Sbjct: 139 ALGFFALAIFLFLTLDSDIAPSSTASASASAASSEGVEVQVTYGTVLKLMHEKTKFRLHS 198

Query: 153 HDVPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWL 212
           HDVPYGSGSGQQSVTGFPNV+DSNSYWIVRP+PGTSAKQGD IKSGTIIRLQHMRTRKWL
Sbjct: 199 HDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPEPGTSAKQGDPIKSGTIIRLQHMRTRKWL 258

Query: 213 HSHMHASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLHS 272
           HSH+HASPISGNLEVSCFGG+++SDTGDYW+L+IEGSGKTWKQ+QR+RLQHIDT GYLHS
Sbjct: 259 HSHLHASPISGNLEVSCFGGESESDTGDYWKLIIEGSGKTWKQDQRIRLQHIDTGGYLHS 318

Query: 273 HDKKYSRIAGGQQEV 278
           HDKKYSRIAGGQQEV
Sbjct: 319 HDKKYSRIAGGQQEV 333

[Close]

BLAST of Cucsat.G11415 vs. ExPASy TrEMBL
Match: A0A5D3D8V4 (Stromal cell-derived factor 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001120 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 2.89e-143
Identity = 241/381 (63.25%), Postives = 247/381 (64.83%), Query Frame = 0


Query: 17  FFSIVRRRFCGELLRSTVASSGSSGLSRRKPSASASSPSSASTRIVYRERVPPSHSDLPF 76
           FFSIVRRRF   L RSTVASSGSSGLSRRKPSASASSPSS  TRIVYRERVP SHSDLPF
Sbjct: 18  FFSIVRRRFGVVLFRSTVASSGSSGLSRRKPSASASSPSSVPTRIVYRERVPSSHSDLPF 77

Query: 77  WQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEK 136
           WQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEK
Sbjct: 78  WQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGSVLKLMHEK 137

Query: 137 TKFRLHSHDVPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQH 196
           TKFRLHSHDVPYGSGSGQQSVTGFPNV+DSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQH
Sbjct: 138 TKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQH 197

Query: 197 MRTRKWLHSHMHASPISGNLE-------------------VSCFG-------------GD 256
           MRTRKWLHSH+HASPISGNLE                   V+C                +
Sbjct: 198 MRTRKWLHSHLHASPISGNLEHPFVFARWFDVSLVFSIMLVACVDFMMTEFIKKAQHCHN 257

Query: 257 ADSDTGD--------------YW------------------------------------- 278
             + TG               +W                                     
Sbjct: 258 LTALTGQISLNGVNCRPLFDLFWQLTCLICTPRCMITGFEDFSLVLEITICENSGLCNGN 317

[Close]

BLAST of Cucsat.G11415 vs. ExPASy TrEMBL
Match: A0A371FQ99 (Stromal cell-derived factor 2-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=SDF2 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 3.77e-143
Identity = 209/257 (81.32%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 31  RSTVASSGSSGLSRRKPSASASSPSSAS-----TRIVYRERVPPSHSDLPFWQRNWFIAL 90
           R TVASSGS  LSRRKPS+S+SS SS+S     TRIVYRE   PS SD P WQ+NWFIAL
Sbjct: 48  RRTVASSGSQSLSRRKPSSSSSSSSSSSQPSGSTRIVYRESRSPSESDFPIWQQNWFIAL 107

Query: 91  LFVMAIGFFALALFLFLGLDLDHGSPS--SASAASSEGVEI--TYGSVLKLMHEKTKFRL 150
           LFVMA+GFFALALFLFL LD D    S  SASAASSEGVE+  TYG+VLKL HEKTKFRL
Sbjct: 108 LFVMALGFFALALFLFLTLDSDIAPSSTVSASAASSEGVEVQVTYGTVLKLTHEKTKFRL 167

Query: 151 HSHDVPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRK 210
           HSHDVPYGSGSGQQSVTGFP+V+D+NSYWIVRP+P TSAKQGD IKSGTIIRLQHMRTRK
Sbjct: 168 HSHDVPYGSGSGQQSVTGFPSVDDANSYWIVRPEPDTSAKQGDAIKSGTIIRLQHMRTRK 227

Query: 211 WLHSHMHASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYL 270
           WLHSH+HASPISGNLEVSCFGGD+DSDTGDYW+L+IEGSGKTWKQ+Q++RLQH+DT GYL
Sbjct: 228 WLHSHLHASPISGNLEVSCFGGDSDSDTGDYWKLIIEGSGKTWKQDQKIRLQHVDTGGYL 287

Query: 271 HSHDKKYSRIAGGQQEV 278
           HSHDKKYSRIAGGQQEV
Sbjct: 288 HSHDKKYSRIAGGQQEV 304

[Close]

BLAST of Cucsat.G11415 vs. ExPASy TrEMBL
Match: A0A4D6NUV0 (Dolichyl-phosphate-mannose-protein mannosyltransferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3312 PE=4 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 2.90e-141
Identity = 209/256 (81.64%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 33  TVASSGSSGLSRRKPSASASSPS----SASTRIVYRERVPPSHSDLPFWQRNWFIALLFV 92
           TVASSGS  LSRRK  AS+SSPS    S STRIVYRE    S SD P WQ+NWFIALLFV
Sbjct: 45  TVASSGSQNLSRRK--ASSSSPSQQQTSGSTRIVYRESRSTSESDFPIWQQNWFIALLFV 104

Query: 93  MAIGFFALALFLFLGLDLD----HGSPSSASAASSEGVE--ITYGSVLKLMHEKTKFRLH 152
           MA+GFFALALFLF+ LD D      + +SASAASSEGVE  ITYG+VLKLMHEKTKFRLH
Sbjct: 105 MALGFFALALFLFITLDSDVVPSSAASASASAASSEGVEVQITYGTVLKLMHEKTKFRLH 164

Query: 153 SHDVPYGSGSGQQSVTGFPNVEDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKW 212
           SHDVPYGSGSGQQSVTGFP+V+DSNSYWIVRPQPGT+AKQGD+IKSGTIIRLQHMRTRKW
Sbjct: 165 SHDVPYGSGSGQQSVTGFPSVDDSNSYWIVRPQPGTNAKQGDSIKSGTIIRLQHMRTRKW 224

Query: 213 LHSHMHASPISGNLEVSCFGGDADSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTSGYLH 272
           LHSH+HASPISGNLEVSCFGG+ +SDTGDYWRL+IEGSGKTWKQ+Q++RLQHIDT GYLH
Sbjct: 225 LHSHLHASPISGNLEVSCFGGENESDTGDYWRLLIEGSGKTWKQDQKIRLQHIDTGGYLH 284

Query: 273 SHDKKYSRIAGGQQEV 278
           SHDKKYSRIAGGQQEV
Sbjct: 285 SHDKKYSRIAGGQQEV 298

The following BLAST results are available for this feature:

BLAST of Cucsat.G11415 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZE8	2.1e-88	81.15	Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana OX=3702 GN=SD...	[more]
Q54P23	8.2e-37	49.69	Stromal cell-derived factor 2-like protein OS=Dictyostelium discoideum OX=44689 ...	[more]
Q99470	5.0e-34	47.90	Stromal cell-derived factor 2 OS=Homo sapiens OX=9606 GN=SDF2 PE=1 SV=2	[more]
Q9DCT5	4.2e-33	46.71	Stromal cell-derived factor 2 OS=Mus musculus OX=10090 GN=Sdf2 PE=1 SV=1	[more]
Q9ESP1	9.4e-33	43.96	Stromal cell-derived factor 2-like protein 1 OS=Mus musculus OX=10090 GN=Sdf2l1 ...	[more]

BLAST of Cucsat.G11415 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037641.1	3.49e-168	93.28	Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subs...	[more]
KAA0064593.1	1.07e-161	93.47	stromal cell-derived factor 2-like protein [Cucumis melo var. makuwa]	[more]
KAG6608288.1	1.18e-161	93.78	Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subs...	[more]
KAG6591542.1	9.83e-160	86.77	Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subs...	[more]
KAG7024427.1	4.96e-154	78.60	Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cucsat.G11415 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8Z2	5.20e-162	93.47	Stromal cell-derived factor 2-like protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A445KWC9	1.80e-143	82.35	Stromal cell-derived factor 2-like protein OS=Glycine soja OX=3848 GN=D0Y65_0089...	[more]
A0A5D3D8V4	2.89e-143	63.25	Stromal cell-derived factor 2-like protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A371FQ99	3.77e-143	81.32	Stromal cell-derived factor 2-like protein (Fragment) OS=Mucuna pruriens OX=1576...	[more]
A0A4D6NUV0	2.90e-141	81.64	Dolichyl-phosphate-mannose-protein mannosyltransferase OS=Vigna unguiculata OX=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016093	MIR motif	SMART	SM00472	mir_2	coord: 153..207 e-value: 1.8E-13 score: 60.7 coord: 95..150 e-value: 1.2E-7 score: 41.4 coord: 33..87 e-value: 1.5E-9 score: 47.7
IPR016093	MIR motif	PFAM	PF02815	MIR	coord: 76..200 e-value: 5.4E-13 score: 49.2
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 33..87 score: 14.867475
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 95..150 score: 14.598272
IPR016093	MIR motif	PROSITE	PS50919	MIR	coord: 153..207 score: 11.661524
None	No IPR available	GENE3D	2.80.10.50		coord: 21..216 e-value: 3.8E-72 score: 243.9
None	No IPR available	PANTHER	PTHR46809	STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN	coord: 1..215
None	No IPR available	PANTHER	PTHR46809:SF6	BNAA09G55850D PROTEIN	coord: 1..215
IPR036300	Mir domain superfamily	SUPERFAMILY	82109	MIR domain	coord: 31..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G11415.T1	Cucsat.G11415.T1	mRNA
Cucsat.G11415.T3	Cucsat.G11415.T3	mRNA
Cucsat.G11415.T2	Cucsat.G11415.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035269	protein O-linked mannosylation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	glycosyltransferase activity