Cucsat.G10898 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10898
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	expansin-like A2
Location	ctg1681: 1685436 .. 1687586 (-)
RNA-Seq Expression	Cucsat.G10898
Synteny	Cucsat.G10898

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGCCTTATAGGAGAACCACACAACTTTAATATCTATCCACTGTTTTTGACCTTTTGAAAGCAGCCTATATAACCATCATTCTTGTTGCTTTCCTTCTCACCATTATCATTATTTGCTTACCAAAATATGGCTCTTTGTCTTGCTCTTCTCTTCTTTCTTGTTTCTTCAGCTTCAGCTGCCGCTACTTGTAATCGTTGTGTTCATCAATCTAAAGCTGCTTATTACTATGATGATACGCCTATCCCATGTAAAGATATTCTATACTTTCATTGCCTTTTCTTTTTTTCTTTCTTAACTTAAGATCTTGAAGAACTTTGCATCATCAAATCAAATATATGTTTAGATACAATATTTAATGTCTTCCTTAATAACCATTTGATTTTGGATTTGTAGGTTTTAAAATGTGTGCATGTGTTCTTTACAACTTTTTTAATAAATATTTCAATGTTTTCTTACACCAAATTTTGAATCCCAAAAAACCAACTTTATTGTTTTAAAAAAAAGTTGGCTTGGTTTTTTAAACACTTCTAAAAGAGTAGATATAAAGCAGTTGATGAGATATATGTATACTCCAGGTTACATCTAACCGTTACTCTTCATTTAATATAAGTGTGATAAATTAATTTTCTTTAAATGCAGATGGGGCATGTGGGTATGGGGCTTTGGCATTTGAATTATCCAATGGGTATGCTGCTGGTGTTGTTCCATCTCTTTATAAACAGGGTGCTGGATGTGGTTCCTGTTTCCAAGTAAATATTTTATAATTTATTCATTCTTTTATATATATATTTTTCTTTTAAATCTTTTGATTTCATTCCTTTAATACGACAAGTGTGTGTATTGGTTTTTTAAAGGTAAGGTGTAAGGATAGGAGATTTTGCAGCAGTGTTGGAACTAAAGTGGTTGCAACAGATCAAAATTATGATAACAGATATGATTTTGTCCTCAGCAAGAAAGCATTTTCTTCAATGGCTTTAAAGAATAAGACTAGCCAACTTCTGAATCTTGGCACTGTTGATGTGGAATATAAGAGGTGACCATTTAACTATTATTGCCATTGCTTTATTACTAAAGTTCCTTTTCATATTTTTTTGGATTTTGAAATTAAACTATGACACATATTGTCTCCCCGGCCTCTAAGTTTTACGTTATGTGTTATTTCTCACTTTTCTATCACTCGTGTTTTCAAAAAAATCAAACCAAGTTTTGAACTCTAAAATAGTTTTCAAAGATATCGCTCACACTTTAATTTCATGATCTTTTTTTAATGCATGAATCATAAAAATGATATATATTATGATCACTTCCATACCAAAAATATCAACTAACTTTGGTGAGTTTGATATGTTTTGGCACAGGATACCATGTGCATACAAAAACAAGAATTTGTTAGTGAGAGTGGAAGAATGGAGCCAAAAGCCATACTATTTAGCCCTTAAATTCCTTTACCAAGGTGGCCAAACAGAAATAACAAGAGTTGAGATAGCTGAAGTAAGTTTCAAAACTGATCAACACAAAACCAATAACACATCAAACTTCATTAATTAATATAAAACTGAGTAAGAGCTAGTTTTGATCAAATAAATGAAATTGAGGTTTATTGTTTAATTTTTTGCATGAAATTTAATAGGTTGGTTCCGATGATTGGGAAAGCATGAAGAAAAATTATGGTGCAATTTGGGATATAAACAAACAACTTGAAAGAGCATTGCAATTGAAGATAGTTGTAACTTCGGAGAACAAAAGAATTGAAAACTTATATTGGGCAGTTAATGATCTTCCTGAGGATTGGGAAAATGGAGAGATTTATGATACTGGAATTCAAATTAATAACATTGCTAATGAAACTTGCCCAAGAAACCAGTGTGGTGATTTCCCATGGAAGTAAATCCATAATTCCTTAGCTTGTTATATATGTATTCAATAAGTTTCATTATTGTCGGTGATGAGGAAAATAATGTGTGTTTGCATTCCTCGTTTGTATGCAAAACTTTAATAAAAACTCATTAGAGTTCCATTATGAAATAAAATGGTATGGTTCTTTAAATTTTTATTATCATATATATATTTATGACCCTCATTATTGTTGTTCTCTTTATCATTATATATCATCTACCTGTTCAAGGTGATCTCTCTTTGATTTGTTTT

Coding sequence (CDS)

ATGGCTCTTTGTCTTGCTCTTCTCTTCTTTCTTGTTTCTTCAGCTTCAGCTGCCGCTACTTGTAATCGTTGTGTTCATCAATCTAAAGCTGCTTATTACTATGATGATACGCCTATCCCATATGGGGCATGTGGGTATGGGGCTTTGGCATTTGAATTATCCAATGGGTATGCTGCTGGTGTTGTTCCATCTCTTTATAAACAGGGTGCTGGATGTGGTTCCTGTTTCCAAGTAAGGTGTAAGGATAGGAGATTTTGCAGCAGTGTTGGAACTAAAGTGGTTGCAACAGATCAAAATTATGATAACAGATATGATTTTGTCCTCAGCAAGAAAGCATTTTCTTCAATGGCTTTAAAGAATAAGACTAGCCAACTTCTGAATCTTGGCACTGTTGATGTGGAATATAAGAGGATACCATGTGCATACAAAAACAAGAATTTGTTAGTGAGAGTGGAAGAATGGAGCCAAAAGCCATACTATTTAGCCCTTAAATTCCTTTACCAAGGTGGCCAAACAGAAATAACAAGAGTTGAGATAGCTGAAGTTGGTTCCGATGATTGGGAAAGCATGAAGAAAAATTATGGTGCAATTTGGGATATAAACAAACAACTTGAAAGAGCATTGCAATTGAAGATAGTTGTAACTTCGGAGAACAAAAGAATTGAAAACTTATATTGGGCAGTTAATGATCTTCCTGAGGATTGGGAAAATGGAGAGATTTATGATACTGGAATTCAAATTAATAACATTGCTAATGAAACTTGCCCAAGAAACCAGTGTGGTGATTTCCCATGGAAGTAA

Protein sequence

MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKNKTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEIYDTGIQINNIANETCPRNQCGDFPWK

Homology

[Close]

BLAST of Cucsat.G10898 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.3e-63
Identity = 123/263 (46.77%), Postives = 168/263 (63.88%), Query Frame = 0


Query: 5   LALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPS 64
           L LL  ++  +S+AA C+RC+H SKAAY+   + +  GAC YG++A     G+ A  +PS
Sbjct: 6   LFLLSVVLLFSSSAAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPS 65

Query: 65  LYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMA--LKNKT 124
           +YK G+GCG+CFQVRCK+   CSS GT V+ TD N  N+ D VLS +AF +MA  +    
Sbjct: 66  IYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGAD 125

Query: 125 SQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEV 184
             LL  G VD+EY+R+PC Y NK + VRVEE S+ P YLA+K LYQGGQTE+  + IA+V
Sbjct: 126 RDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQV 185

Query: 185 GSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEIYD 244
           GS  W  M +++GA+W  +K    ALQ + VVT+       + W+   LP +WE G+ YD
Sbjct: 186 GSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYD--GKMVWSQRVLPANWEAGKSYD 245

Query: 245 TGIQINNIANETCPRNQCGDFPW 266
            G+QI +IA E C  + C D  W
Sbjct: 246 AGVQITDIAQEGC--DPCDDHIW 264

[Close]

BLAST of Cucsat.G10898 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-61
Identity = 124/258 (48.06%), Postives = 172/258 (66.67%), Query Frame = 0


Query: 3   LCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVV 62
           L L ++ FL SS+  A  C+RC+H+SKAAY+   + +  GAC YG++A     G+ A  +
Sbjct: 5   LFLIVVIFLFSSSVNA--CDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAI 64

Query: 63  PSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMA--LKN 122
           PS+YK GAGCG+CFQVRCK+ + CS+ GT V+ TD N  N+ D VLS +AF +MA  +  
Sbjct: 65  PSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVG 124

Query: 123 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 182
               LL  G VD+EY+R+PC Y NKN+ VRVEE S+KP YL +K LYQGGQTE+  ++IA
Sbjct: 125 ADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIA 184

Query: 183 EVGSD-DWESMKKNYGAIWDINKQLERALQLKIVVTS--ENKRIENLYWAVNDLPEDWEN 242
           +VGS  +W  M +++GA+W  +K    A+Q + VVT   + K I    W+ + LP +WE 
Sbjct: 185 QVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMI----WSQSVLPSNWEA 244

Query: 243 GEIYDTGIQINNIANETC 256
           G+IYD G+QI +IA E C
Sbjct: 245 GKIYDAGVQITDIAQEGC 256

[Close]

BLAST of Cucsat.G10898 vs. ExPASy Swiss-Prot
Match: Q9LZT5 (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-61
Identity = 125/263 (47.53%), Postives = 169/263 (64.26%), Query Frame = 0


Query: 3   LCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVV 62
           L L ++ FL SS+  A  C+RC+H+SKA+Y+   + +  GAC YG +A     G+ A  +
Sbjct: 5   LYLIVVIFLFSSSVNA--CDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAI 64

Query: 63  PSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMA--LKN 122
           PS+YK GAGCG+CFQVRCK+ + C+S GT V+ TD N  N+ D VLS +AF +MA  +  
Sbjct: 65  PSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVG 124

Query: 123 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 182
               LL  G VDVEY+R+PC Y  +NL VRVEE S+KP YLA+K LYQGGQTE+  ++IA
Sbjct: 125 VDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIA 184

Query: 183 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTS--ENKRIENLYWAVNDLPEDWENG 242
            VGS  W  M +++GA+W  +K    ALQ K  VT   + K +    W+   LP +W +G
Sbjct: 185 PVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTV----WSKRVLPANWNSG 244

Query: 243 EIYDTGIQINNIANETCPRNQCG 262
            IYD G+QI +IA E C  + CG
Sbjct: 245 RIYDAGVQITDIAQEGC--DTCG 259

[Close]

BLAST of Cucsat.G10898 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.9e-57
Identity = 114/266 (42.86%), Postives = 162/266 (60.90%), Query Frame = 0


Query: 5   LALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELS-NGYAAGVVP 64
           L L+   + +   A+ C+RCV +S+AAYY     +  G+CGYG  A   +  G+ A   P
Sbjct: 20  LLLVIVALLAPRLASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGP 79

Query: 65  SLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKNKTS 124
           +LY+ G GCG+C+QVRCKD++ CS+ G +VV TD+   NR   VLS  AF++MA     +
Sbjct: 80  ALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAA 139

Query: 125 QLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVG 184
            L  L  VDVEYKR+PC Y++++L VRV+E S+ P  L + FLYQGGQT+I  V++A+VG
Sbjct: 140 SLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVG 199

Query: 185 SDDWESMKKNYGAIWDINKQLERALQLKIVVTS--ENKRIENLYWAVND-LPEDWENGEI 244
           S  W+ M + +G  W +       LQ+++VVT   + K +    WA  + LP  W  GE+
Sbjct: 200 SSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWV----WADREVLPRRWRAGEV 259

Query: 245 YDTGIQINNIANETCPRNQCGDFPWK 267
           YDTG+QI +IA E C    C    WK
Sbjct: 260 YDTGVQITDIAQEGC--FPCDTHEWK 279

[Close]

BLAST of Cucsat.G10898 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-55
Identity = 119/273 (43.59%), Postives = 165/273 (60.44%), Query Frame = 0


Query: 1   MALCLALLFFLV--SSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60
           MA    +LFF+V   SAS  + C+RCV +SKA +      +  G+CGYG+LA   + G+ 
Sbjct: 9   MASASVVLFFVVVGMSASMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHL 68

Query: 61  AGVVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQ-NYDNRYDFVLSKKAFSSMA 120
           A   P+L++ G GCG+CFQVRCKD + CS+ G KVV TD+    NR D VLS  A+++MA
Sbjct: 69  AAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMA 128

Query: 121 LKNKTSQLLNLGTVDVEYKRIPCAY-KNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITR 180
                +QL     VDVEYKR+PC Y   +NL +RVEE S+ P  L+++FLYQGGQT+I  
Sbjct: 129 RPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVA 188

Query: 181 VEIAEVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTS--ENKRIENLYWAVND-LPE 240
           V++A VGS +W+ M ++YG  W   +     LQ ++VVT   + K +    WA  + LP 
Sbjct: 189 VDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWV----WADGEVLPR 248

Query: 241 DWENGEIYDTGIQINNIANETCPRNQCGDFPWK 267
            W  G +YD G+QI ++A E C    C    WK
Sbjct: 249 RWTAGRVYDAGVQIADVAQEGC--YPCDTQEWK 275

[Close]

BLAST of Cucsat.G10898 vs. NCBI nr
Match: XP_004144876.1 (expansin-like A2 [Cucumis sativus] >KGN43333.2 hypothetical protein Csa_020404 [Cucumis sativus])

HSP 1 Score: 548 bits (1413), Expect = 4.15e-197
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG 60
           MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG
Sbjct: 1   MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG 60

Query: 61  VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN 120
           VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN
Sbjct: 61  VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN 120

Query: 121 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 180
           KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA
Sbjct: 121 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 180

Query: 181 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI 240
           EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI
Sbjct: 181 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI 240

Query: 241 YDTGIQINNIANETCPRNQCGDFPWK 266
           YDTGIQINNIANETCPRNQCGDFPWK
Sbjct: 241 YDTGIQINNIANETCPRNQCGDFPWK 266

[Close]

BLAST of Cucsat.G10898 vs. NCBI nr
Match: XP_008447893.1 (PREDICTED: expansin-like A2 [Cucumis melo])

HSP 1 Score: 516 bits (1328), Expect = 4.07e-184
Identity = 249/268 (92.91%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASA--AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60
           MALCLALLFFLVSSASA  AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA
Sbjct: 1   MALCLALLFFLVSSASASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60

Query: 61  AGVVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMAL 120
           AGVVPSL+KQGAGCGSCFQVRCKDRRFCS VGTKVVATDQNYDNRYDFVLSKKA++SMAL
Sbjct: 61  AGVVPSLFKQGAGCGSCFQVRCKDRRFCSRVGTKVVATDQNYDNRYDFVLSKKAYASMAL 120

Query: 121 KNKTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVE 180
           KNKT++LLNLGT+DVEYKRIPC YKNKNLLVRVEEWSQKP+YLALKFLYQGGQTEITRVE
Sbjct: 121 KNKTNELLNLGTIDVEYKRIPCTYKNKNLLVRVEEWSQKPFYLALKFLYQGGQTEITRVE 180

Query: 181 IAEVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENG 240
           IAEVGSD+WESMK+NYGAIWDINKQLE ALQLKIVVTSEN +IENLYWAVNDLPEDWENG
Sbjct: 181 IAEVGSDNWESMKRNYGAIWDINKQLEGALQLKIVVTSENNQIENLYWAVNDLPEDWENG 240

Query: 241 EIYDTGIQINNIANETCPRNQCGDFPWK 266
           EIYDTGIQINNI  ETCPRNQCGD PWK
Sbjct: 241 EIYDTGIQINNIDKETCPRNQCGDLPWK 268

[Close]

BLAST of Cucsat.G10898 vs. NCBI nr
Match: QDL52561.1 (expansin A8-like protein [Cucumis melo])

HSP 1 Score: 513 bits (1322), Expect = 3.34e-183
Identity = 248/268 (92.54%), Postives = 258/268 (96.27%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASA--AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60
           MALCLALLFFLVSSASA  AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA
Sbjct: 1   MALCLALLFFLVSSASASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60

Query: 61  AGVVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMAL 120
           AGVVPSL+KQGAGCGSCFQVRCKDRRFCS VGTKVVATDQNYDNRYDFVLSKKA++SM L
Sbjct: 61  AGVVPSLFKQGAGCGSCFQVRCKDRRFCSRVGTKVVATDQNYDNRYDFVLSKKAYASMDL 120

Query: 121 KNKTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVE 180
           KNKT++LLNLGT+DVEYKRIPC YKNKNLLVRVEEWSQKP+YLALKFLYQGGQTEITRVE
Sbjct: 121 KNKTNELLNLGTIDVEYKRIPCTYKNKNLLVRVEEWSQKPFYLALKFLYQGGQTEITRVE 180

Query: 181 IAEVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENG 240
           IAEVGSD+WESMK+NYGAIWDINKQLE ALQLKIVVTSEN +IENLYWAVNDLPEDWENG
Sbjct: 181 IAEVGSDNWESMKRNYGAIWDINKQLEGALQLKIVVTSENNQIENLYWAVNDLPEDWENG 240

Query: 241 EIYDTGIQINNIANETCPRNQCGDFPWK 266
           EIYDTGIQINNI  ETCPRNQCGD PWK
Sbjct: 241 EIYDTGIQINNIDKETCPRNQCGDLPWK 268

[Close]

BLAST of Cucsat.G10898 vs. NCBI nr
Match: KAA0040370.1 (expansin-like A2 [Cucumis melo var. makuwa] >TYK23334.1 expansin-like A2 [Cucumis melo var. makuwa])

HSP 1 Score: 500 bits (1287), Expect = 1.21e-177
Identity = 236/251 (94.02%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 16  SAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSLYKQGAGCGSC 75
           SAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSL+KQGAGCGSC
Sbjct: 32  SAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSLFKQGAGCGSC 91

Query: 76  FQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKNKTSQLLNLGTVDVEY 135
           FQVRCKDRRFCS VGTKVVATDQNYDNRYDFVLSKKA++SMALKNKT++LLNLGTVDVEY
Sbjct: 92  FQVRCKDRRFCSRVGTKVVATDQNYDNRYDFVLSKKAYASMALKNKTNELLNLGTVDVEY 151

Query: 136 KRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSDDWESMKKNYG 195
           KRIPC YKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSD+WESMK+NYG
Sbjct: 152 KRIPCTYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSDNWESMKRNYG 211

Query: 196 AIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEIYDTGIQINNIANETC 255
           AIWDINKQLE ALQLKIVVTSEN +IENLYWAVNDLPEDWENGEIYDTGIQINNI  ETC
Sbjct: 212 AIWDINKQLEGALQLKIVVTSENNQIENLYWAVNDLPEDWENGEIYDTGIQINNIDKETC 271

Query: 256 PRNQCGDFPWK 266
           PRNQCGD PWK
Sbjct: 272 PRNQCGDLPWK 282

[Close]

BLAST of Cucsat.G10898 vs. NCBI nr
Match: XP_038888844.1 (expansin-like A3 [Benincasa hispida])

HSP 1 Score: 491 bits (1263), Expect = 2.84e-174
Identity = 235/266 (88.35%), Postives = 250/266 (93.98%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG 60
           MAL L LLFFLVSS   AATC+RCVH+SK AYYYDDTPI YGACGYG LAFELSNGY AG
Sbjct: 1   MALFLGLLFFLVSSV--AATCDRCVHRSKIAYYYDDTPIQYGACGYGPLAFELSNGYVAG 60

Query: 61  VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN 120
           VVPSLYKQGAGCG+CFQVRCKD+RFCSSVGTKV+ATDQNYDNRYDFVLS+KA+SSMALKN
Sbjct: 61  VVPSLYKQGAGCGACFQVRCKDKRFCSSVGTKVIATDQNYDNRYDFVLSQKAYSSMALKN 120

Query: 121 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 180
           KT+QLLNLGTVDVEYKRIPC Y+NKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA
Sbjct: 121 KTTQLLNLGTVDVEYKRIPCTYRNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 180

Query: 181 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI 240
           EVGSDDWESMK+NYGAIWD++KQLE ALQLKIVVTSEN +IENLYWAV DLPEDW+NGEI
Sbjct: 181 EVGSDDWESMKRNYGAIWDVSKQLEGALQLKIVVTSENNKIENLYWAVYDLPEDWQNGEI 240

Query: 241 YDTGIQINNIANETCPRNQCGDFPWK 266
           YDTGIQIN+I  ETCPRNQCGD PWK
Sbjct: 241 YDTGIQINDITKETCPRNQCGDLPWK 264

[Close]

BLAST of Cucsat.G10898 vs. ExPASy TrEMBL
Match: A0A1S3BHX1 (expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC103490241 PE=3 SV=1)

HSP 1 Score: 516 bits (1328), Expect = 1.97e-184
Identity = 249/268 (92.91%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASA--AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60
           MALCLALLFFLVSSASA  AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA
Sbjct: 1   MALCLALLFFLVSSASASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60

Query: 61  AGVVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMAL 120
           AGVVPSL+KQGAGCGSCFQVRCKDRRFCS VGTKVVATDQNYDNRYDFVLSKKA++SMAL
Sbjct: 61  AGVVPSLFKQGAGCGSCFQVRCKDRRFCSRVGTKVVATDQNYDNRYDFVLSKKAYASMAL 120

Query: 121 KNKTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVE 180
           KNKT++LLNLGT+DVEYKRIPC YKNKNLLVRVEEWSQKP+YLALKFLYQGGQTEITRVE
Sbjct: 121 KNKTNELLNLGTIDVEYKRIPCTYKNKNLLVRVEEWSQKPFYLALKFLYQGGQTEITRVE 180

Query: 181 IAEVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENG 240
           IAEVGSD+WESMK+NYGAIWDINKQLE ALQLKIVVTSEN +IENLYWAVNDLPEDWENG
Sbjct: 181 IAEVGSDNWESMKRNYGAIWDINKQLEGALQLKIVVTSENNQIENLYWAVNDLPEDWENG 240

Query: 241 EIYDTGIQINNIANETCPRNQCGDFPWK 266
           EIYDTGIQINNI  ETCPRNQCGD PWK
Sbjct: 241 EIYDTGIQINNIDKETCPRNQCGDLPWK 268

[Close]

BLAST of Cucsat.G10898 vs. ExPASy TrEMBL
Match: A0A515EIT6 (Expansin A8-like protein OS=Cucumis melo OX=3656 GN=EXPLA8 PE=2 SV=1)

HSP 1 Score: 513 bits (1322), Expect = 1.62e-183
Identity = 248/268 (92.54%), Postives = 258/268 (96.27%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASA--AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60
           MALCLALLFFLVSSASA  AATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA
Sbjct: 1   MALCLALLFFLVSSASASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYA 60

Query: 61  AGVVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMAL 120
           AGVVPSL+KQGAGCGSCFQVRCKDRRFCS VGTKVVATDQNYDNRYDFVLSKKA++SM L
Sbjct: 61  AGVVPSLFKQGAGCGSCFQVRCKDRRFCSRVGTKVVATDQNYDNRYDFVLSKKAYASMDL 120

Query: 121 KNKTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVE 180
           KNKT++LLNLGT+DVEYKRIPC YKNKNLLVRVEEWSQKP+YLALKFLYQGGQTEITRVE
Sbjct: 121 KNKTNELLNLGTIDVEYKRIPCTYKNKNLLVRVEEWSQKPFYLALKFLYQGGQTEITRVE 180

Query: 181 IAEVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENG 240
           IAEVGSD+WESMK+NYGAIWDINKQLE ALQLKIVVTSEN +IENLYWAVNDLPEDWENG
Sbjct: 181 IAEVGSDNWESMKRNYGAIWDINKQLEGALQLKIVVTSENNQIENLYWAVNDLPEDWENG 240

Query: 241 EIYDTGIQINNIANETCPRNQCGDFPWK 266
           EIYDTGIQINNI  ETCPRNQCGD PWK
Sbjct: 241 EIYDTGIQINNIDKETCPRNQCGDLPWK 268

[Close]

BLAST of Cucsat.G10898 vs. ExPASy TrEMBL
Match: A0A5A7TAM6 (Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003950 PE=3 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 5.84e-178
Identity = 236/251 (94.02%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 16  SAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSLYKQGAGCGSC 75
           SAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSL+KQGAGCGSC
Sbjct: 32  SAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAGVVPSLFKQGAGCGSC 91

Query: 76  FQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKNKTSQLLNLGTVDVEY 135
           FQVRCKDRRFCS VGTKVVATDQNYDNRYDFVLSKKA++SMALKNKT++LLNLGTVDVEY
Sbjct: 92  FQVRCKDRRFCSRVGTKVVATDQNYDNRYDFVLSKKAYASMALKNKTNELLNLGTVDVEY 151

Query: 136 KRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSDDWESMKKNYG 195
           KRIPC YKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSD+WESMK+NYG
Sbjct: 152 KRIPCTYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSDNWESMKRNYG 211

Query: 196 AIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEIYDTGIQINNIANETC 255
           AIWDINKQLE ALQLKIVVTSEN +IENLYWAVNDLPEDWENGEIYDTGIQINNI  ETC
Sbjct: 212 AIWDINKQLEGALQLKIVVTSENNQIENLYWAVNDLPEDWENGEIYDTGIQINNIDKETC 271

Query: 256 PRNQCGDFPWK 266
           PRNQCGD PWK
Sbjct: 272 PRNQCGDLPWK 282

[Close]

BLAST of Cucsat.G10898 vs. ExPASy TrEMBL
Match: A0A0A0K4T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019330 PE=3 SV=1)

HSP 1 Score: 447 bits (1151), Expect = 4.21e-158
Identity = 227/266 (85.34%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG 60
           MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG
Sbjct: 1   MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG 60

Query: 61  VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN 120
           VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN
Sbjct: 61  VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN 120

Query: 121 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 180
           KTSQLLNLGTVDVEYKR                                       VEIA
Sbjct: 121 KTSQLLNLGTVDVEYKR---------------------------------------VEIA 180

Query: 181 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI 240
           EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI
Sbjct: 181 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI 227

Query: 241 YDTGIQINNIANETCPRNQCGDFPWK 266
           YDTGIQINNIANETCPRNQCGDFPWK
Sbjct: 241 YDTGIQINNIANETCPRNQCGDFPWK 227

[Close]

BLAST of Cucsat.G10898 vs. ExPASy TrEMBL
Match: A0A6J1GMD1 (expansin-like A3 OS=Cucurbita moschata OX=3662 GN=LOC111455290 PE=3 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 6.03e-155
Identity = 211/266 (79.32%), Postives = 234/266 (87.97%), Query Frame = 0


Query: 1   MALCLALLFFLVSSASAAATCNRCVHQSKAAYYYDDTPIPYGACGYGALAFELSNGYAAG 60
           MA  + LLFFLVSSA  AATC+RCVHQSK AYYYDDTPI +GACGYG LAFELSNGY AG
Sbjct: 1   MAFYVGLLFFLVSSA--AATCDRCVHQSKTAYYYDDTPIQHGACGYGPLAFELSNGYVAG 60

Query: 61  VVPSLYKQGAGCGSCFQVRCKDRRFCSSVGTKVVATDQNYDNRYDFVLSKKAFSSMALKN 120
           VVPSLY+QGAGCG+CFQVRCK++RFCS+ GTKVVATDQNYDNRYDFVLSK A+S+MALKN
Sbjct: 61  VVPSLYRQGAGCGACFQVRCKNKRFCSTAGTKVVATDQNYDNRYDFVLSKIAYSAMALKN 120

Query: 121 KTSQLLNLGTVDVEYKRIPCAYKNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIA 180
           KT +LLNLGTVDVEYKRIPC YKNKNL+VRVEEWSQKPYYLALK +YQGGQTEI  +EIA
Sbjct: 121 KTKELLNLGTVDVEYKRIPCTYKNKNLMVRVEEWSQKPYYLALKLVYQGGQTEIKGIEIA 180

Query: 181 EVGSDDWESMKKNYGAIWDINKQLERALQLKIVVTSENKRIENLYWAVNDLPEDWENGEI 240
           EVGSD+WESMK+NYGAIWD NK LE ALQLKIVV S     EN+YWA  DLP+DW+NGE+
Sbjct: 181 EVGSDNWESMKRNYGAIWDTNKVLEGALQLKIVVASRYNN-ENIYWATYDLPDDWKNGEM 240

Query: 241 YDTGIQINNIANETCPRNQCGDFPWK 266
           YDTG+QI++I NE CP  QCGD PWK
Sbjct: 241 YDTGVQIDDIVNEKCPPKQCGDLPWK 263

The following BLAST results are available for this feature:

BLAST of Cucsat.G10898 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVE5	8.3e-63	46.77	Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1	[more]
Q9LZT4	1.2e-61	48.06	Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1	[more]
Q9LZT5	1.2e-61	47.53	Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1	[more]
Q10S70	8.9e-57	42.86	Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1	[more]
Q7XCL0	3.7e-55	43.59	Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1	[more]

BLAST of Cucsat.G10898 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144876.1	4.15e-197	100.00	expansin-like A2 [Cucumis sativus] >KGN43333.2 hypothetical protein Csa_020404 [...	[more]
XP_008447893.1	4.07e-184	92.91	PREDICTED: expansin-like A2 [Cucumis melo]	[more]
QDL52561.1	3.34e-183	92.54	expansin A8-like protein [Cucumis melo]	[more]
KAA0040370.1	1.21e-177	94.02	expansin-like A2 [Cucumis melo var. makuwa] >TYK23334.1 expansin-like A2 [Cucumi...	[more]
XP_038888844.1	2.84e-174	88.35	expansin-like A3 [Benincasa hispida]	[more]

BLAST of Cucsat.G10898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHX1	1.97e-184	92.91	expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC103490241 PE=3 SV=1	[more]
A0A515EIT6	1.62e-183	92.54	Expansin A8-like protein OS=Cucumis melo OX=3656 GN=EXPLA8 PE=2 SV=1	[more]
A0A5A7TAM6	5.84e-178	94.02	Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003...	[more]
A0A0A0K4T8	4.21e-158	85.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019330 PE=3 SV=1	[more]
A0A6J1GMD1	6.03e-155	79.32	expansin-like A3 OS=Cucurbita moschata OX=3662 GN=LOC111455290 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 62..80 score: 40.0 coord: 128..144 score: 36.32 coord: 40..58 score: 35.26
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 10..140 e-value: 1.9E-30 score: 107.7
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 10..144
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 61..135 e-value: 6.9E-12 score: 45.5
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 141..197 e-value: 1.6E-10 score: 42.8
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 7..184
None	No IPR available	PANTHER	PTHR31692:SF4	EXPANSIN-LIKE A1-RELATED	coord: 7..184
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 41..145 score: 23.582603

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10898.T1	Cucsat.G10898.T1	mRNA
Cucsat.G10898.T2	Cucsat.G10898.T2	mRNA
Cucsat.G10898.T3	Cucsat.G10898.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region