Cucsat.G10897 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10897
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	expansin-like A2
Location	ctg1681: 1657772 .. 1659452 (-)
RNA-Seq Expression	Cucsat.G10897
Synteny	Cucsat.G10897

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATATCTTCCCTTTCCCTTTTCCCCTTTCAACAAAAATGCCCACCTGTTTTCCACCATGGCCCATCAGAACACCTCTATATAAACCTCTCTGTCCTCTTACTTCCCTCTCACTCCAAATCCTCAAGAAGGAGAAAAAAACAAAATGCCTTTCTTCCTCCTCCTTCTCTTCCTCTCCCTTTTCTCCTCAGCCACTGCTTGTGATCGTTGTATTCATCAAGCCAAAGCTGCCTTCTACCAAGACGAAGCCGCCGGTCTATGTACGATTCCAATCCCTACACTTGAAAAGGCTGATCCAAACCCAACCCCACATAAAATTTTCACAATTAATGAATTGGGTATGTTTCATTTCTTGCAGATAGAGGCGCTTGTGGCTATGGCGATCTTACATTACAGCTCTCAAATGGCTACTTCTCCGCCATTATGCCTCCTCTTTACAAGTATGGCGCTGGCTGTGGCGCCTGTTTTCAAGTAATTAAACATTCTTAAAACAAAACAATCCTCTGTTTTTTCTTTTTTCTTTTCATTTTCCCTGTTTTCTGTGATTGGGTTAATGCCCTGTTTTTTGCAGGTAAGGTGCAAGAACGAGAAGATTTGTAGTAAAGAAGGGACGAAAATCATTGTAACAGATCGAAACGATAATACTTATACAGGATTGGTTCTTAGTCAGAAAGCTTTTGGTGAAATGGCTATGAGTGGAAAAGATGGATTGCTTTTGAGTTATGGAGTTGTGGATGTTGAATTCAAGAGGTTTGTTTAGTTTTTTCAATGATGGGGTTTTGTTTTGTTAGACCTACCATATTTTGATTGATATAATTTAATCACCCACTTTGATGTTGACAAATTTCTTACTTTTTTTTTCAAAAAGAAAAAGTGAGATCTTATCCAAATTTTATGATTTGGGTGTTGATTTTCCATCCTATTCTTGCAGGATTCCTTGTGAATACGATAACAAAAACTTGATGGTTAGAGTAGAAGAATGGAGTCAATATCCCAATTACTTAGCTATTAAATTGCTTAACCAAGGTGGCCAAACCGAAATAGTAGCCATCGATATAGCTCAGGTTTGATTCATTAATACAATAATACTTAATTGCATCTAAGTAGTTTTCTTTTATCGAACTATTTGAATTGGTTACTCGAATTGTATGAACAGGTAGGTTACTCGAATTGGGATTACATGGGTAGGAACTACGGCGCTGTGTGGGAGACTAAAAAACCAGCCCCAAAAGGACCATTGCAACTACGGTTCGTGGTTACTTCTGGATATGATGGTAAATACATTTGGGCTAAATACGTACTCCCTGCTGACTGGAGACCTGGACTAGTTTACGATACTGGAGTTCAAATCTACGACATTGCTAAAGAAGGTTGTCCAACAGAACAATGTGGCGATGGGCAATGGAAACGACGATAAGATATATCATCGACTCAACTCGGCCATCAAATTTTACATGTTATATGTATAAAGTTATATGCTGCTATTTGTCATATAAACAGTGTAAGAAAAAAGGGAAAATAGAATAAGGAGATGGATGGATGGATGGATGGCATGGAGTTGTATGGGTGATGATTGTATCATAATCATTTAAGTAAATAATAAAAAAAGTATATGAATTAATAATGATATGATATTTAGTTTAGAGTTGTCATGGGTGGCTACGGGGCTTCAATTGGATGGTCTTTTTCTGTTTTAAAGTCTAGTCCTGTTTTCACACCAACTGGATCTGATGAACATTGACAGTGAAGTAAAGTAATAAATGTGGAAATAAGTAACTGAACGCACCGTTTCGGTATTGACTATCCAGTGTTTGATGTTTCTTTTCCAACGGCTATATATGAATTATAGA

Coding sequence (CDS)

ATGCCTTTCTTCCTCCTCCTTCTCTTCCTCTCCCTTTTCTCCTCAGCCACTGCTTGTGATCGTTGTATTCATCAAGCCAAAGCTGCCTTCTACCAAGACGAAGCCGCCGGTCTATATAGAGGCGCTTGTGGCTATGGCGATCTTACATTACAGCTCTCAAATGGCTACTTCTCCGCCATTATGCCTCCTCTTTACAAGTATGGCGCTGGCTGTGGCGCCTGTTTTCAAGTAAGGTGCAAGAACGAGAAGATTTGTAGTAAAGAAGGGACGAAAATCATTGTAACAGATCGAAACGATAATACTTATACAGGATTGGTTCTTAGTCAGAAAGCTTTTGGTGAAATGGCTATGAGTGGAAAAGATGGATTGCTTTTGAGTTATGGAGTTGTGGATGTTGAATTCAAGAGGATTCCTTGTGAATACGATAACAAAAACTTGATGGTTAGAGTAGAAGAATGGAGTCAATATCCCAATTACTTAGCTATTAAATTGCTTAACCAAGGTGGCCAAACCGAAATAGTAGCCATCGATATAGCTCAGGTAGGTTACTCGAATTGGGATTACATGGGTAGGAACTACGGCGCTGTGTGGGAGACTAAAAAACCAGCCCCAAAAGGACCATTGCAACTACGGTTCGTGGTTACTTCTGGATATGATGGTAAATACATTTGGGCTAAATACGTACTCCCTGCTGACTGGAGACCTGGACTAGTTTACGATACTGGAGTTCAAATCTACGACATTGCTAAAGAAGGTTGTCCAACAGAACAATGTGGCGATGGGCAATGGAAACGACGATAA

Protein sequence

MPFFLLLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAIMPPLYKYGAGCGACFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAMSGKDGLLLSYGVVDVEFKRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRPGLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR

Homology

[Close]

BLAST of Cucsat.G10897 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-42
Identity = 82/128 (64.06%), Postives = 97/128 (75.78%), Query Frame = 0


Query: 33  RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGA 92
           R+PC+Y NK + VRVEE S+ PNYLAIKLL QGGQTE+VAI IAQVG S+W YM R++GA
Sbjct: 140 RVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGA 199

Query: 93  VWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRPGLVYDTGVQIYDIAKEGCPT 152
           VW T K  P G LQ RFVVT+GYDGK +W++ VLPA+W  G  YD GVQI DIA+EGC  
Sbjct: 200 VWVTDK-VPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDIAQEGC-- 259

Query: 153 EQCGDGQW 161
           + C D  W
Sbjct: 260 DPCDDHIW 264

[Close]

BLAST of Cucsat.G10897 vs. ExPASy Swiss-Prot
Match: Q9LZT5 (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.4e-42
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 33  RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGA 92
           R+PC Y  +NL VRVEE S+ PNYLAIKLL QGGQTE+V IDIA VG S W YM R++GA
Sbjct: 139 RVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGA 198

Query: 93  VWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRPGLVYDTGVQIYDIAKEGCPT 152
           VW T K  P G LQ +F VT GYDGK +W+K VLPA+W  G +YD GVQI DIA+EGC T
Sbjct: 199 VWATDK-VPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIAQEGCDT 258

Query: 153 EQCG 157
             CG
Sbjct: 259 --CG 259

[Close]

BLAST of Cucsat.G10897 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-41
Identity = 79/119 (66.39%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 33  RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYS-NWDYMGRNYG 92
           R+PC+Y NKN+ VRVEE S+ PNYL IKLL QGGQTE+V+IDIAQVG S NW YM R++G
Sbjct: 139 RVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHG 198

Query: 93  AVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRPGLVYDTGVQIYDIAKEGC 151
           AVW T K  P G +Q RFVVT GYDGK IW++ VLP++W  G +YD GVQI DIA+EGC
Sbjct: 199 AVWVTDK-VPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAGVQITDIAQEGC 256

[Close]

BLAST of Cucsat.G10897 vs. ExPASy Swiss-Prot
Match: Q8H274 (Expansin-like A3 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-38
Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 33  RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGA 92
           RIPC+Y +KNL + VEE S+ PN L IK L QGGQT+I+A+D+AQVG S+W +M R YG 
Sbjct: 150 RIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGP 209

Query: 93  VWETKKPAPKGPLQLRFVVTSGYDGKYIWA-KYVLPADWRPGLVYDTGVQIYDIAKEGCP 152
           VW   + AP GPLQ R VVT GYDGK++WA + VLPA+W+PG VYDTG +I D+A+E C 
Sbjct: 210 VWSIDR-APNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADVARESC- 269

Query: 153 TEQCGDGQWK 162
              C    WK
Sbjct: 270 -LDCATLDWK 276

[Close]

BLAST of Cucsat.G10897 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37
Identity = 75/130 (57.69%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 33  RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGA 92
           R+PCEY +++L VRV+E S+ PN L I  L QGGQT+IVA+D+AQVG S+W +M R +G 
Sbjct: 153 RVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGP 212

Query: 93  VWETKKPAPKGPLQLRFVVTSGYDGKYIWA-KYVLPADWRPGLVYDTGVQIYDIAKEGCP 152
            W     AP GPLQ+R VVT GYDGK++WA + VLP  WR G VYDTGVQI DIA+EGC 
Sbjct: 213 SWSMAN-APPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGC- 272

Query: 153 TEQCGDGQWK 162
              C   +WK
Sbjct: 273 -FPCDTHEWK 279

[Close]

BLAST of Cucsat.G10897 vs. NCBI nr
Match: XP_004153444.1 (expansin-like A2 [Cucumis sativus] >KGN43339.2 hypothetical protein Csa_020293 [Cucumis sativus])

HSP 1 Score: 288 bits (738), Expect = 4.32e-96
Identity = 135/151 (89.40%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. NCBI nr
Match: XP_016900448.1 (PREDICTED: expansin-like A2 [Cucumis melo])

HSP 1 Score: 282 bits (721), Expect = 1.66e-93
Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY+N NLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYNNLNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAK+VLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. NCBI nr
Match: KAA0046629.1 (expansin-like A2 [Cucumis melo var. makuwa] >TYK23323.1 expansin-like A2 [Cucumis melo var. makuwa])

HSP 1 Score: 281 bits (720), Expect = 2.36e-93
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY N NLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYSNLNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAK+VLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. NCBI nr
Match: QDL52562.1 (expansin A9-like protein [Cucumis melo])

HSP 1 Score: 280 bits (717), Expect = 6.75e-93
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY+N NLMVRVEEWS+YPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYNNLNLMVRVEEWSRYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAK+VLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. NCBI nr
Match: XP_023554574.1 (expansin-like A3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270 bits (690), Expect = 8.60e-89
Identity = 123/151 (81.46%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY N+NL++RVEEWSQYP+YLAIKLL QGGQTEIV 
Sbjct: 120 KDGLLMSYGVVDVEFK----RIPCEYKNQNLLIRVEEWSQYPSYLAIKLLYQGGQTEIVG 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           +DIAQVGYSNWDYMGRNYGAVWETKKP PKGPLQLRFVVTSGYDGK+IWAKYVLPADWRP
Sbjct: 180 MDIAQVGYSNWDYMGRNYGAVWETKKPLPKGPLQLRFVVTSGYDGKWIWAKYVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GL+YDTGVQIYDIAKEGCPTEQCGDGQW+RR
Sbjct: 240 GLIYDTGVQIYDIAKEGCPTEQCGDGQWRRR 266

[Close]

BLAST of Cucsat.G10897 vs. ExPASy TrEMBL
Match: A0A0A0K0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019900 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.09e-112
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA
Sbjct: 135 KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 194

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP
Sbjct: 195 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 254

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 255 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 285

[Close]

BLAST of Cucsat.G10897 vs. ExPASy TrEMBL
Match: A0A1S4DWU6 (expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC103490236 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 8.06e-94
Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY+N NLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYNNLNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAK+VLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. ExPASy TrEMBL
Match: A0A5D3DIA9 (Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003840 PE=3 SV=1)

HSP 1 Score: 281 bits (720), Expect = 1.14e-93
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY N NLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYSNLNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAK+VLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. ExPASy TrEMBL
Match: A0A515EIS0 (Expansin A9-like protein OS=Cucumis melo OX=3656 GN=EXPLA9 PE=2 SV=1)

HSP 1 Score: 280 bits (717), Expect = 3.27e-93
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY+N NLMVRVEEWS+YPNYLAIKLLNQGGQTEIVA
Sbjct: 120 KDGLLLSYGVVDVEFK----RIPCEYNNLNLMVRVEEWSRYPNYLAIKLLNQGGQTEIVA 179

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAK+VLPADWRP
Sbjct: 180 IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRP 239

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR
Sbjct: 240 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 266

[Close]

BLAST of Cucsat.G10897 vs. ExPASy TrEMBL
Match: A0A6J1HVQ7 (expansin-like A3 OS=Cucurbita maxima OX=3661 GN=LOC111468278 PE=3 SV=1)

HSP 1 Score: 270 bits (690), Expect = 4.30e-89
Identity = 124/151 (82.12%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 13  KSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVA 72
           K  +L  +  + V+F     RIPCEY N+NL+VRVEEWSQYP+YLAIKLL QGGQTEIV 
Sbjct: 121 KDGLLLSYGVVDVEFK----RIPCEYKNQNLLVRVEEWSQYPSYLAIKLLYQGGQTEIVG 180

Query: 73  IDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRP 132
           +DIAQVGYSNWDYMGRNYGAVWETKKP PKGPLQLRFVVTSGYDGK+IWAKYVLPADWRP
Sbjct: 181 MDIAQVGYSNWDYMGRNYGAVWETKKPLPKGPLQLRFVVTSGYDGKWIWAKYVLPADWRP 240

Query: 133 GLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR 163
           GL+YDTGVQIYDIAKEGCPTEQCGDGQW+RR
Sbjct: 241 GLIYDTGVQIYDIAKEGCPTEQCGDGQWRRR 267

The following BLAST results are available for this feature:

BLAST of Cucsat.G10897 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVE5	2.2e-42	64.06	Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1	[more]
Q9LZT5	6.4e-42	64.52	Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1	[more]
Q9LZT4	2.4e-41	66.39	Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1	[more]
Q8H274	1.9e-38	57.69	Expansin-like A3 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA3 PE=2 SV=1	[more]
Q10S70	2.1e-37	57.69	Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1	[more]

BLAST of Cucsat.G10897 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153444.1	4.32e-96	89.40	expansin-like A2 [Cucumis sativus] >KGN43339.2 hypothetical protein Csa_020293 [...	[more]
XP_016900448.1	1.66e-93	87.42	PREDICTED: expansin-like A2 [Cucumis melo]	[more]
KAA0046629.1	2.36e-93	87.42	expansin-like A2 [Cucumis melo var. makuwa] >TYK23323.1 expansin-like A2 [Cucumi...	[more]
QDL52562.1	6.75e-93	86.75	expansin A9-like protein [Cucumis melo]	[more]
XP_023554574.1	8.60e-89	81.46	expansin-like A3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G10897 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K0S3	2.09e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019900 PE=3 SV=1	[more]
A0A1S4DWU6	8.06e-94	87.42	expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC103490236 PE=3 SV=1	[more]
A0A5D3DIA9	1.14e-93	87.42	Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003...	[more]
A0A515EIS0	3.27e-93	86.75	Expansin A9-like protein OS=Cucumis melo OX=3656 GN=EXPLA9 PE=2 SV=1	[more]
A0A6J1HVQ7	4.30e-89	82.12	expansin-like A3 OS=Cucurbita maxima OX=3661 GN=LOC111468278 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 3..69 e-value: 2.8E-14 score: 55.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 5..72
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 70..111 e-value: 8.2E-10 score: 40.5
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 3..111
None	No IPR available	PANTHER	PTHR31692:SF4	EXPANSIN-LIKE A1-RELATED	coord: 3..111
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 5..74 score: 12.354333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10897.T1	Cucsat.G10897.T1	mRNA
Cucsat.G10897.T3	Cucsat.G10897.T3	mRNA
Cucsat.G10897.T4	Cucsat.G10897.T4	mRNA
Cucsat.G10897.T2	Cucsat.G10897.T2	mRNA
Cucsat.G10897.T5	Cucsat.G10897.T5	mRNA
Cucsat.G10897.T6	Cucsat.G10897.T6	mRNA
Cucsat.G10897.T10	Cucsat.G10897.T10	mRNA
Cucsat.G10897.T7	Cucsat.G10897.T7	mRNA
Cucsat.G10897.T8	Cucsat.G10897.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region