Cucsat.G10859 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10859
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transmembrane emp24 domain-containing protein p24beta2
Location	ctg1681: 1046057 .. 1052995 (-)
RNA-Seq Expression	Cucsat.G10859
Synteny	Cucsat.G10859

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTCAATCGAAGAAACAAACCATTGTGTTTAACATTTTCTGCTTTCTTATTGGTCAAAGTCTCGTCATCCATCCAATAATATTTCGACACGTCATAATCCGACATCGTAACAAATCGGAAGCGACGTAAAAGGTTTAACATTTTTTCTATATTGAGTTAAAAACATTTAATCTCTCACATTCTTCGAACTCCCAACTGCGCCACCGTCTGTTTTGACCCTTTTTCTGATCTCTTCCCTTCGGATTAAATTAACCCTTTAACTTATTCTAACTCTCAGATTCTCTCTTCCTCCAATTGGCGGCAAGCAACTCTTTGTTCATCCTCTCAATTCCTCAATTTTGAGGTAATTTACGTACCCTTTTGTTTCTTCTTTCCTTTTCTTCATCACGGATCCTGAAGATTTGACTTTTTTTTTGTATGATTCTTATTATTTTTCATATGGGTTTGTGATTTTTTTGAAGATATGGAGCGATGGGCTATGAGATTTGTGATGATGATGGCGTTTGTTGGGGTTTTGCTGTTGAGTTTGAGAAAATCAGAAGGGATTAGGTTTGTGATTGACAGGGAAGAATGTTTCTCTCACCATGTTCAATACGAGGGAGATACTGTTCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCATGGCATTATGGCGACGATGGCGTTGATCTTGTGGTATCATTCTTCTACACTTTCCTTTGTTTTGCTTTCCTTTTCATTAATAGCATTTGAAACTATAGGCAGACGATGTTCATGGGTTCCTTTTTTGTGTTTCTTAATTCTTTGTTAAGTGCATTATTGGTTCTTCTCGGGCAAGGCCTTAACTTGGTATTAGAGATGATTAGTTTTTGAGATGCATTGGTTTGACTGAGTGACAGAGACCTCTTAATAAAAGCTATTACCATGTTTCCCCGTTAAGAGGACTAATAGTAAAACTAGAATGGGGAAGGATTGATCTTTGTCCAAGAGGTGGTTAGTCTTTAAGGTTGTTTTTCAGAACTCAAGGACACAGTTGTACAATTTATATAGCAAATTCTGTTTAAGTAAGGTCGTGGCTTTAGCTTGTTTCCTGGAGCTCCTATTTATAAAAGTTATGACATAGTTCTTGGGTGCTAGAAAATTTATTTTAGTATTAGTGGTGGCTAGCTTTAAGTTATTTTTGTGAGGAGAGAGAGAGAGAGAGACAGAGTACCTCCGAACTCCGAACTCCTAACTATATCTACTTCTTAGTGCTTGGGTTGGGGTGCTTGTAAAGACCAATGCTAAAATAAGAATGGGCAGAGATTTGTCTTAGTAGAAAAGATGGTTAATTTTGTGGAGATGCTTTGATTTGGATAGTGACGGACCATTCTAATAAGAGCTATGTCTTAGTTCTTGAAGTGATAGAAAGATTATTACTAAAACAAAAATGTGTAGAGGCATCTTAGTATAAGGGGTGGCTAATTCTTATAATTTAATTTTTGGAGATGTTTTGATATTTATTTTATAGGGAAGGAGGGAGAGTGACATACAAATGATAGATTTTTATTTTAATCAGAAACAGAGAAATTTATATATATAAATCAGCAAGAAGAAAAACAGCCAAAGGGCGAGGGGTTGAGAACCCCACCCCCTACCCTAACAAAAAGACCAAACAATAAGTGCCTTCTAGTTGTGAATAATCATGAGAAGGTTGTAATTACAAAATAACTGTGTAGTTTGTACACCATCAAGAGGTCATATGCTGCACAAGAGCCCAAAAAGAATTGAAAGAGCTAAACTTATCATCGAACACCCTACTATCTCTTTCATTCCAAATATGCCACAAGAGAGCATGGGTTGCACAACTCCACAGAATTTGTTCTTTTTCACAAAAAGCTGCCCCCATCAGACCCTCCATCATCCATTCTTCGACCCACAATGGGAGACAGCCATCCAATCCAAAGGTCTCAAAGATAATATTCCACCCTTTGGATGCGAACACAAACTCGCAGTATAAATAAAGGTGATCTTAGTCTCAGCCTCCTGAAACTTCCTTTGGAGCTTTTCCTGGGTGTTGAGACCTCTTAGGCGAGGGACTAAATAAGATTGACCCAAGGAAACTTAACTTTAGTAGCCCCCTTGGTCAACTTTAGAAAACTAGACATGGTAGAAAACTGGCCCAAAGCTTGCAACTTCCACCATAAGCTGTCTTTTGCTCTATTCACCACCCAACCAGTCAGCAGCTGAGCAAGAGCATTATAATTGCCAATTTCTCTATCAAACAATCTCCTTCTCAACTCCAGATCCCAAGCTCGATTAGAATCAACCCAACAATCTGCCACCACAACATTCTTTTTTGAGGAAATAATATAGATGTCACGGTACAAGGAAGCAAGAGGCTGGGCTGCACAACACCTATCCTCCCAAACTTTATGTGTTTCCCATCACCCTCTACCATTCCATAATCTGAAGCTGCCTTTGTCTTTAGGCTTGATACAACTCCACCTGTGCTCCTTCACGCCGTAAATATAGTCTACTAGGCATTTCTTCATGACAAAGCCTCCAAAGCCACTTCATCAAGAGAGCAAAATTCTTCTGATTGAGAGAGCCGATTCCCAACCCCTCATAAATCGTTGGGAGAGAGGTCCACTTCCAGCTAACAAGATGGGAGGCCGACATAGTGAGTGCTTATTAGGCTGGTTTATCATATCGACCACCCCAAACAAAGTCACAAATAAGCTTTTCCACGCGAGAAATAAAACCTTTCGGAGCCTTTGTTAAGGAGAAAAAGTAACGAGGTAAACTTTGATTAACCGATTGAGCAAAGAATAAGTCTACTGCCTTTGGACAGGACCAATCCATGCCACTTACCAATTTTAGTTTTAAATTTCTCCTCAAGAGCAACTCGAGCCTCCTTAGTTGTGGCCTTCCCACCAAGGGGAAACCCTTGGTAAACAAAAGTTAATTGATCAACTTTGCAACCCAACTCACTAGCTTTTGAAGCAACCTCCTCGTCACAAAGATTAATCTCAATAAGAGAAGTTTTGGCAGCATTGAGGGCTAGGCCCAAATCAAGTAAGAAAAGATTGACAATAGACCACCAAGCCCTAAGATTTTCATCACCCCAAGAGCAAAAGATCGAAATGTCATCGACATACTGAAGGTGCATTACCTCAACCGAAGGGTTGCCAAAGGAAAAGCCATGGATCAATCTTCTTTTGTTACAACAGTGAACAATATTACTGAACGCATCGCCAACAATGGTAAGAAGGACAGGGGAGACGGCGTGCCTTTGCCTAAGCCCTCCATGTCCCATAATCTTCCCACGTGGTCTTCCATTGATAATGACAGAGAAATTGATAGATGAAAGATAGCCCCAAATCCATCTCCTCCACCTTTTCCCAAAACCTTTGAGCTTGAGGATCTCATTGAGGAAGGTGCAGTTGACTTTATCATAAGCCTTCTCAAGATTAAGCTTTAACACAAGCTGTTACGACCCGCTTCGTCGGCACACGCTCTCTCGGATGCAGTGTGTTCAGCGACATGCAATGCTTGGGAGATTAAACTATAGCAAAGCGAAAGCCCCCTTCTTCCCATCCACCTTCCATTCTTCAAGAGATTCTGAAGCAGTTAAATGGCATCAAGGATTTTCCTCCCTTCCACAAAAGCCACTTGAGCATCATGGATAGTGGAAGGAAGGATCTTTTTCAGTCTTCTGGTGAGGACTTCGAAAATATTTTTATACAGAGATGTCACTAAGCTGATAGGTCAGAACTCACTTACTCGTGTAGGCTTCTTCTTTTTGGGATCAAGCAGATGTTAGTTTCATCACACCTTTTGTTTGAAATTTCGTTTTTAAAAAACTCATGGAACACTTCAATCAAATCACTTTTTAAAATGTTCCATGAAATTTTACAAAACTCCTGTCATGCCATCAAGCCCTAGCGAATTAATGTTCCCCAAATCAAAGACAACAGCCCGATTCTCTTCCTCTTCGAAAGGAGCCTGCCTAGCCTCACCATTCATCAGTCTATAATTCAGCCCATCAAAGATAAGACGAGGATTGTCATCTTTCTTATACAACCTGCTATAAAAACTAACAATCTTATCAGTAATCTCATTGTCTCTAAGAAGAATTCTACCCTCAGTCTTCCATTCTACCCTCAGTAATCTTCAATCAAACCCAACTCCACCTGTCCATCTATGAAAAAGTTGGAATATTTTCATCTCCTTTAATGTGTTTACTAAGTAAATAATATTGAAAGGTGTCTGTAAAGGCTCATCACCTTTCTATTTACCTTTATATCACTGAGAATGGATGCAAAAGCTTCTACTTCATATCAATGAATCAACTTCACCTGTGAAAGGTCCAAATCTTGTTTCTTATCCTGCTCTAAATTGGACACAATGAACAACTTACGTAAATATGGATTCTACGTCACCCATCAGATAGTATTTCTGATACATTTTAAAATAACGTTGTTGTGGGAAAGAAATTTAAGCTAGAAATGAACATAATTAACTAGAAAATCTTTTGAGAGACTATGAAGTCTCCAAAATTGGCTTGTTTTTTACTTGAACATAAGCCTGATTTCATGCTTAGAATCTGTCATTGTAGTCATTTGTGTACTGCATGGTCAAGAAGCCTTTGGACTATGCATTGAAGTTGAGTTGGTTATTATTTAGACGATTAAGCAGTTTTTCTTAAATGGAAACAAACCTCCTTATTAATGAAAATAAACGAGACTTTAAGCTCAAAGTACAAGAGTATTATACTAAGAGCAAAAAGAACTAAGGGAGCATACAGGCTAAAACGAAAACAAAACTATACTTGTGCAGCATAAAATATGTCAACCTATAAATCAAATTCAACCAGAAAAGTAACAAGCAAAACATAGCCTCTTGAAGATGAAACATCTTAAGAAGGCTAAATACAAACCAAAACTTAAAAACTCACGAGAGGAGCCCTTTCAAATAAAAACTTGCACGCCCAAATCTTCAAGATGAAAGTAGAAAGAGAAGCGCCAAGTAGAAGCAACCGGCTGCCTCAAATCTGTCTTGTCAAAACCATCCAGAACCCAAAGGAACTCCAATAAAACTTCCAAAACAAACAGAATCTGATTCCAAAAGAACTCCCAAACAGATGCGCCCCTTGGCAAGCCAGAAATACGGAGACCAAACACAAAACCAATATCAAGCAAACTACTAAAAAAACGGAGACGATTTAGCAGTTAAAGCTATGTATAGAGACTCTAGAGACTATATTTGGCGATTTTCTCTTCTTGTGGAGTTCTTATTATTAGACCCTTGTGTTATATTGCTTTCACTGATAGAATATGTTGTTGATCCAATATTTTCTTTGCAATATAGATAAAGGGACCTTCTGGTGAACATCTTCATGATTTCCGTGATAAGACTAGTGAAAAGCATGAATTTATTGCTCACAACAAAGGTCTTCATCGATTCTGCTTCACGAACAAGTCTCCGTATCACGAAACCATTGATTTTGATGTGCACGTTGGCCACTTTTCTTATCATGAGCAACATGCAAAAGATGGTAAGATGCCATTTCCCTGTTTTATTATTACCTGACCTTTTACAAGTTAAAATCAATCTCAAAACTGGTGCATACTACAGAGCATTTCAACCCTTTGATGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTCGAACAACATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAACATTGATGTACATGTCTTGAATTTAAATAATTTCCATGACATCAGCTTAGGAATTTAATTTCTTTTGCCGAAGTTAGTCCTTGATAACATTGACATCAAGTAACTTACAAATCTAAACACATTAATCAAGTGAGCTCTGGAAATAGAAGTTTTTGGCATTACTCAAGCACCAATGATCGTGATGGTAGCTTTCTTCTTCATCATTGTTGCTGAGGCCATGTTAGATTTAGGGGGATAATGGCAATTTCCGGAAACTAGACTAACATGTATAAGAGAATGATTTATGAGACCTTATTTGATAACCATTTAACTTTTGTTTCTATTTTTTGAAAATTAAATTTATAAACACTACTTCTACTTGTAAATTTCCATGTTTTTTTCATTCAAGCTTTTAAAAAAAACAGTTTTCAAAAATGTGTTTTTACTTTTTCAACAAACGTGGAAATCATAATATGGAAAATTTGGGAGGAAACAAATATAAATTTTAAAAGAGAAAACTAAAACCAAAAAAGGGTCGAACAATGGAATGACTTCAAAAGACTTTGGATCTAATCTTAACCTCAGTTGTGTTGCTCAAATTACATTGTGAAGATAGATACAACCTAACAAAACCTATGTGGTTTGGGTTGTGTTGATGTAGAACTCGGTTAAATATTCTGTTCAATCTCGATACTTGTTGAAACAAGGAAAACCCATAATGTATTTATGTGGTACGGTTTTTTATTGCAGTGAATGAAGGAATGGGCAAAAGGGCAATTCACAAGGCAATGTTTGAATCAGCAGCACTGGTAGGGGCCAGTGTCCTCCAAGTCTATTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAATCAAACAAATTCACCTTTCCCTTCTTTTTCTTTTTCTTTTTCTTTTTTTACTCTCCTATTTATGGCTTTATCATTTTGTATCTTTTTTCCCTCACATGATCGTAACATACTAGTTGACTTTAATATAAATTTTTCTTTTTTCTCTTGTCTGGTTCAATAAGCAATTACTTTCCTATGTTCTTGAGTTTCTGCATCAGTTGAGTGGCATTCCTTTTTTAGAATTTAAATACCAGTTGTTCAATCATTGAACAAATCATGTTCGTTGTACAATTATAGAACAAATCATGTTCATGGTCGAGGGTAGTATACTTTTTTTATTTTTTAGAAATACATATTTTCTCCTATTATCATTTATTTATC

Coding sequence (CDS)

ATGGAGCGATGGGCTATGAGATTTGTGATGATGATGGCGTTTGTTGGGGTTTTGCTGTTGAGTTTGAGAAAATCAGAAGGGATTAGGTTTGTGATTGACAGGGAAGAATGTTTCTCTCACCATGTTCAATACGAGGGAGATACTGTTCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCATGGCATTATGGCGACGATGGCGTTGATCTTGTGATAAAGGGACCTTCTGGTGAACATCTTCATGATTTCCGTGATAAGACTAGTGAAAAGCATGAATTTATTGCTCACAACAAAGGTCTTCATCGATTCTGCTTCACGAACAAGTCTCCGTATCACGAAACCATTGATTTTGATGTGCACGTTGGCCACTTTTCTTATCATGAGCAACATGCAAAAGATGAGCATTTCAACCCTTTGATGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTCGAACAACATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGTGAATGAAGGAATGGGCAAAAGGGCAATTCACAAGGCAATGTTTGAATCAGCAGCACTGGTAGGGGCCAGTGTCCTCCAAGTCTATTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA

Protein sequence

MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV

Homology

[Close]

BLAST of Cucsat.G10859 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.1e-87
Identity = 151/197 (76.65%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 18  LLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPS 77
           LL S + + GIRFVIDREECFSH  +YEGDT+HVSFVVIK+DS WH+ +DGVDLVI GP+
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHF 137
           GE +HDFR++ S KH+F+   KG++RFCFTNKSPYHETIDFDV +GHF+Y++QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAIHKAMFESAALVGASVLQ 197
            PLM+QISKLEEALYNIQFEQHWLEAQTDRQAIVNE M KRA+HKA+FES AL+GAS LQ
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQ 191

Query: 198 VYLLQRLFERKLGTSRV 215
           VYLL+RLFERKLG SRV
Sbjct: 192 VYLLRRLFERKLGMSRV 208

[Close]

BLAST of Cucsat.G10859 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.1e-28
Identity = 73/214 (34.11%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MER   +  + +    +LL S+ +   +   ++ EEC   +V YEGDTV  +FVV+  D 
Sbjct: 1   MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            W     G+D  +  P+G  +   +  + +K EF A   G+++FCF N     ET+ F +
Sbjct: 61  FWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYI 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGH       AKDEH +P+  +I++L EAL ++  EQ +L+A+  R    NE   KR I
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
              + E   L  AS LQV  +++LF + +  +RV
Sbjct: 181 FYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of Cucsat.G10859 vs. NCBI nr
Match: XP_004144551.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucumis sativus] >KGN43402.1 hypothetical protein Csa_020232 [Cucumis sativus])

HSP 1 Score: 439 bits (1128), Expect = 2.13e-155
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. NCBI nr
Match: KAA0059209.1 (emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25L/p24 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1101), Expect = 2.80e-151
Identity = 208/214 (97.20%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMRFV+MMAFVGVLLL+LRKSEGIRFVIDREECFSH VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGP+GEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. NCBI nr
Match: XP_038887290.1 (transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida])

HSP 1 Score: 427 bits (1098), Expect = 8.02e-151
Identity = 207/214 (96.73%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMRFV+MMAFVGVLLL+LR+SEGIRFVIDREECFSH+VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. NCBI nr
Match: XP_022136218.1 (transmembrane emp24 domain-containing protein p24beta2 [Momordica charantia])

HSP 1 Score: 410 bits (1054), Expect = 3.55e-144
Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAM    MMAF GV LLS+R+SEGIRFVIDREECFSH+VQY+GDTVHVSFVVIKADS
Sbjct: 1   MERWAM----MMAFAGVFLLSMRRSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEF+AHNKG+HRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFVAHNKGIHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM +RAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 210

[Close]

BLAST of Cucsat.G10859 vs. NCBI nr
Match: XP_022969260.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucurbita maxima] >XP_022969261.1 transmembrane emp24 domain-containing protein p24beta2 [Cucurbita maxima])

HSP 1 Score: 410 bits (1053), Expect = 5.82e-144
Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMR V+MMAF GVLLL+LR+SEG+RFVIDREECFSH+VQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRRVVMMAFAGVLLLNLRQSEGLRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYGDDGVDLVIKGPSGEHLHDFRDK SEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGDDGVDLVIKGPSGEHLHDFRDKASEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM KRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. ExPASy TrEMBL
Match: A0A0A0K541 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 1.03e-155
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. ExPASy TrEMBL
Match: A0A5D3D6W7 (Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00310 PE=3 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 1.35e-151
Identity = 208/214 (97.20%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMRFV+MMAFVGVLLL+LRKSEGIRFVIDREECFSH VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGP+GEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. ExPASy TrEMBL
Match: A0A6J1C720 (transmembrane emp24 domain-containing protein p24beta2 OS=Momordica charantia OX=3673 GN=LOC111007967 PE=3 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 1.72e-144
Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAM    MMAF GV LLS+R+SEGIRFVIDREECFSH+VQY+GDTVHVSFVVIKADS
Sbjct: 1   MERWAM----MMAFAGVFLLSMRRSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEF+AHNKG+HRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFVAHNKGIHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM +RAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 210

[Close]

BLAST of Cucsat.G10859 vs. ExPASy TrEMBL
Match: A0A6J1HZG1 (transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=3661 GN=LOC111468315 PE=3 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 2.82e-144
Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMR V+MMAF GVLLL+LR+SEG+RFVIDREECFSH+VQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRRVVMMAFAGVLLLNLRQSEGLRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYGDDGVDLVIKGPSGEHLHDFRDK SEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGDDGVDLVIKGPSGEHLHDFRDKASEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM KRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of Cucsat.G10859 vs. ExPASy TrEMBL
Match: A0A6J1EKQ0 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111435219 PE=3 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 1.15e-143
Identity = 198/214 (92.52%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60
           MERWAMR V+MMAFVGVLLL+LR+SEGIRFVIDREECFSH+VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYGDDGVDLVIKGP+GEHLHD RDKTSEKHEF+ HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180
           HVGHFSY EQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQ IVNE M KRA+
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

The following BLAST results are available for this feature:

BLAST of Cucsat.G10859 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7M9	5.1e-87	76.65	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
Q9LIL4	3.1e-28	34.11	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]

BLAST of Cucsat.G10859 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144551.1	2.13e-155	100.00	transmembrane emp24 domain-containing protein p24beta2 [Cucumis sativus] >KGN434...	[more]
KAA0059209.1	2.80e-151	97.20	emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25...	[more]
XP_038887290.1	8.02e-151	96.73	transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida]	[more]
XP_022136218.1	3.55e-144	92.52	transmembrane emp24 domain-containing protein p24beta2 [Momordica charantia]	[more]
XP_022969260.1	5.82e-144	92.52	transmembrane emp24 domain-containing protein p24beta2 [Cucurbita maxima] >XP_02...	[more]

BLAST of Cucsat.G10859 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K541	1.03e-155	100.00	GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 S...	[more]
A0A5D3D6W7	1.35e-151	97.20	Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1C720	1.72e-144	92.52	transmembrane emp24 domain-containing protein p24beta2 OS=Momordica charantia OX...	[more]
A0A6J1HZG1	2.82e-144	92.52	transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EKQ0	1.15e-143	92.52	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 27..206 e-value: 3.9E-39 score: 146.0
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 34..206 e-value: 4.6E-31 score: 108.2
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 35..122 score: 14.444189
None	No IPR available	PANTHER	PTHR22811:SF167	TMP21-RELATED PROTEIN-RELATED	coord: 6..210
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 6..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10859.T3	Cucsat.G10859.T3	mRNA
Cucsat.G10859.T2	Cucsat.G10859.T2	mRNA
Cucsat.G10859.T1	Cucsat.G10859.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane