Cucsat.G1081 (gene) Cucumber (B10) v3

Overview
NameCucsat.G1081
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionMADS-box protein
Locationctg1: 7601424 .. 7606446 (+)
RNA-Seq ExpressionCucsat.G1081
SyntenyCucsat.G1081
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATAAATGAGGTATTTTCACATTTCTCATTTTATTGAAAAATGAGAGTGAAATGTGATTGGCTTAAAAGAAGAAATAATTAATGAAAATAATAATACAAAACGTGGGTGTGGTCTGTTGTTTCCTCCCATCCATTTTTGGTGGTGGGAATCAAAACACATCTCTTCTTTTATTTATTTACCTTTTTCTTCCTCTGGGTTTTCAGATTCTTCCCCAAATTTGTTTCCTTTTTTGCTCTCTCAAACACTTTTCCCTTCTTAGGGTTTGTAAGGATACAAAAAAAAAAAAAAAAAAAAACATTTTAAAATAACAAAACGAAACAAATTTCCAAATTTGCCATTTTTGTTGTTGCTGTTTTCTTCTTCTTTGAAATCAATCCCTTCCCATTTCAGGAGTTGAGTTTAGCAGTTTCTTTCATTAAGTTTATCATACATTTTGTTTCCATTTTTGGCCTTCCCTTCCATTTTTGTTCCATTCTCTTCCTTCATTGAAACCCTTTTGTTGCATTCAAAAACCTGTTCTTGTTCTTGTTGTTCTTCCCTGGAGGGGTTTTTCTTAAAAGGAAAAGGAAAATGGTGAGAGGAAAAACTCAGATGAGAAGAATAGAAAATGCGACAAGTCGGCAAGTGACATTCTCGAAGCGTCGGAATGGGCTTCTTAAGAAAGCCTTTGAGCTCTCAGTTCTCTGTGATGCTGAACTTGCTCTCATTATTTTCTCTTCCAGAGGCAAACTTTATGAATTTTCAAGCTCAAGGTATGTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATCTGTGTGTGTATATTTTTTCTAAGATAACCACTTTCATCTCATTTTACTCATACGACCAAATTATGATGTGGGTTTTTTTTTTTTTTTTGTTGAGTATAATCGATTAAGAGTATGGAGATCAGTACAAACGTTTACTGTGTAGGCACTTTTATGAAGAAAGCCACAAGGAATTTGGTTCCATATTTAAGGGTTAAACTACACTTATTAAGTATCCATATTTGAGTATTTTCTTTTCACAAATTTTGTTTTAGTTTTCAGATTTTCTTTTGTTAATTAGGAAGAAGAATCAGTTTAAATAAGCTACAAATTTCTGCTACCTTGTAATGAACTGTCACTAAACTGATCATCATCATTAGAATTTTGGAATTAGTTCAAAATCCAATAAATTAACGTTATGATATGATGATGTTTATTTTTTAACATTAGGGTTTTCTTTTATTTGGGTAATAATGTCTAGAAGAATACATATAAAATTATACACAAAAGCAAGCAATATATCCAAAATCCAATGATAATGTTTGGTCTGGTTTTGGTAAGTGCTTTAAAGGACAGTGGTTCAGAAAATTGAAATTTGGTCCAAATTTTTTTAGCCAAATTGGTACAATATTATGCCAATGTACTGAAGATCAAAAAGTCTTCAATTTTCTACACTCTTTCTGTTTAATAACCTATCAATTGATACAGTTTCTTTTGTGACAAAGAGAGAGAGAAAAGAAACAAAAATAGAGATAAGTTTCTGCATAGTTAACTGGAATCCACTTTAAATATCAACTATAATCTTAAGATTATAATACTCTCAATCATGTACTAATTACTTGATTAGTTTAATAAAGTTTGTTCCTATCCTTATTATTAAAAATTAACTCAAAATTTCACATTGATTAGATAGGAAGATTTGAAACATAATCACTGTTTCTATTGGTACAAAGCATTTGGAGTAAAATGGAAAGTAAAGTAATAGAATAATTTGCAAATAATACGAACCATGTGGAGGAGTGGGGTTTATTTTTTTTGTTTTTTGTTTTTTGGTGAACCAATATCTTTTGTGATTTGTACAATTTATTGTTAGTTATTCATATGATCTAATACTAATTTAGTTAACATTCTCTTTTATGATTAATATATTAGGTTTAAAAAATCTAATTAAACACATATAATTAATTATTATGTCAGTTGGTGTCAAGTCACCTTTCAGCTCTCACACACTAATTGGAAATTTGCTGATAATATTTGATTAAAAGTTTTGTTTTTATTTTATAATTTGTGCTAGTTTATGTCATGGGTTTATCCTTATTTTGATTAATCATTACTATTATAATCTATATGTTACTAAAATCAATATATTAATGTGTGTCATACTCATTTTTTCCCTTAAAAAACTATCCATTATAAACTTAGAATTGTGTATTGATTAAAGGTATCAATTTAAAATTTGAATTTTTGTCCAATCTATATCCCTTCCAAATTTGTTTCAAAAACATCGAGTAAAATTCATAATTTGTGTTATTTGAACTCTTAAATTAAATTCAAGTAAATTGCTGATGGATTTAATAAATTTACCAAGACAGAATTAAGAAGAAAAATGTTGATAATTTCTTGATCTTGAATTAAAGTGTGTTACTTCAGTATGCAGGCCACGGTGGGGAGATATCTAAGGCATACAAGATCAGATCAATCCCATCATCTTGATCAACCTTTACCTCATCAACACGATTTACAAGCTGTTCAGGTTTGTTCGGTGTTAGAACGAAATATCGATACCTCAATTTTATAAAAATGCTTACAAAGATATCCATAGATCTCATAGAAAAAAAAACTGCGGATTGTTTTAGTTACAAACTGCATAAAGATATATATAAGTTTAGTGATAATTATGATTAAGACTATGATGGATATCGATTGGTTAAAGTATCATTTTGATCTTTATATATCTTTACGTTTCGAATGATTTTCAGACTAAGTTTTATATGTTTTTAAAGTTTATGAATACCGAAATCTAGTTTTAAGATTTATTCGAAAGGAACCAAATAAAATGAAACAAATTTATTTATGAAAAATGATATTTTAACCTAATTTGTATCACATTCATACGTACTATTATTATTATTTGTTTTTCTTTCAATAACTAATTGGTTTGGTCTTGTATACATATATGTACACGCCTTTGTCTATGCTTTGATTGTGAGTAAATGAAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAGTCAGTTGAAGTTTCAAAGAGGTAGAATTATAAGATATATATATCCCTAATTGTTTTGGTTTTTAATTAAACACTTAAAAAGTACTTATTTTTAAACCGTTGTGTTGAAAGTTTAGAATATTTGTTTGTTCTGATATGATGTGAAATTTTGGATTTTGTTGTATAAAGCAGGAAATTGCTGGGTGAAAGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGGTAATGAAAAAGACTCATCAACTACAACTCTTTTACACACACACATATATGATAATCACACATTCATAGTTCAACTTTGCCATTGTCATATAATTTTGGATATTATACTGATTTTAACTTTAAATTCTAATGTATCTCTAAACTGTAGTTTTGAAATGTTTATGGAAGTTGAGGAGTAATAACGTCACTTTAATATGAATTTCATCCTTTCCAAATATCTCATTTTATCAAAATAATATTTCATAAAATCTTTGGCTCATGAGTTATATTCTGTGAACTTAGGATACTGCATTAGCCCATGTTGTTTAATGTCAACTATATTATAAAAAAATATATTTATTCAAGATTGATGATGTTAATATTATATTAAAAATCCAACAAGTTTTGTTTTGATATTTTGAATCGAGGAAGAAGAAGATGACATGAACTGATGTGTTTTCATGTTTCTGATTTTCAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGTTAGAAATTTCTTTTCAAAATAAATAAAAGCTTCAAAAACTTTATATTTAATTTCCTATGTGATTTTATGAATATTTTCTAGCCATGAATGCTCTTTTTTCTTGCCCCTATAATTTCTTTTTCTTCTGTTCTTCATTTGGAAAAAAAAAACAAAAAAAAAAAACTAAACAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGGTGAGGATAATCGATATACGATCGCTTTTCGACTATTTTCAAATATAGCAATGTGAATCAAAATATTTATAAAAGATAGTAAAATATCATTTAGTTTATGTATAATAGACCACAATAATAATCCATGTTAGTTAATTTATACTTATGGACCGATTATGAAATTTAATGTATTTATAAATCTTTTCATATAAAATAAATTTTCCTCACATTTCCTTAATCACGGTTTTCTCAAGAACCAAAAAAAAAAAAAAATCTAATTAATAGGTTAAATTACAAGGTTAGTCGATGAAGTTTACTACGGTATCTATTTGATTATTTTGTAATTGTTTTACACTTCTCTAAAATCAATAGCTTATAGGGTATAGAAAAGTATGATATTAAGAGTAAAACTCAGCTAAAATAGAATATTACTCTCTAACCTTACATGTTGTCGAACTATATTACAAATTTTCAATACATATGCAGCTTTACACTCGTTGTATCCTTAAATTTATTCCTTGTTATCAATTATTTTTACCGTTTTTAAAGAACCAAGTCCTTCACTTAAATACTAAAATGATTGCCATTACATTAAATTTACTCACCCCATAAGCTTAATTTTTGTTTGGGTGAATGGGTGATTTTAGGGTTTAGAAGTGTTTTTGTTTTCTTTTTTTTTATATAAACATGTGTTGGATGTATAATTAGGAGTTTAGGGTTTGATTAGACATGGAAGTTGGATCAGTTTGTGTAACAAAACGTTTGTTATAAATTTGTGATATTTTGCAGTACGACGTTGAAGAGGAGCGTCAACAATCTCCAACTCAAATACAGTTAGCAGA

Coding sequence (CDS)

ATGGTGAGAGGAAAAACTCAGATGAGAAGAATAGAAAATGCGACAAGTCGGCAAGTGACATTCTCGAAGCGTCGGAATGGGCTTCTTAAGAAAGCCTTTGAGCTCTCAGTTCTCTGTGATGCTGAACTTGCTCTCATTATTTTCTCTTCCAGAGGCAAACTTTATGAATTTTCAAGCTCAAGTATGCAGGCCACGGTGGGGAGATATCTAAGGCATACAAGATCAGATCAATCCCATCATCTTGATCAACCTTTACCTCATCAACACGATTTACAAGCTGTTCAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAGTCAGTTGAAGTTTCAAAGAGGAAATTGCTGGGTGAAAGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGTTAGAAATTTCTTTTCAAAATAA

Protein sequence

MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSSSMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKVRNFFSK
Homology
[Close]
BLAST of Cucsat.G1081 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-28
Identity = 63/74 (85.14%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE++LIIFS +GKLYEF+SS
Sbjct: 1  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61 SMQATVGRYLRHTR 75
          +MQ T+ RYLRHT+
Sbjct: 61 NMQDTIDRYLRHTK 74

[Close]
BLAST of Cucsat.G1081 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 9.6e-26
Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+AL+IFS R KLYEFSSS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHH 81
          S+ AT+ RY R  +   ++H
Sbjct: 61 SIAATIERYQRRIKEIGNNH 80

[Close]
BLAST of Cucsat.G1081 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-25
Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQM+RIEN TSRQVTFSKRRNGLLKKAFELSVLCDAE+ALI+FS RGKLYEF+S+
Sbjct: 1  MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 61 SMQATVGRYLRHTRSD 77
          S Q T+ RY  +T+ +
Sbjct: 61 STQKTIERYRTYTKEN 76

[Close]
BLAST of Cucsat.G1081 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-25
Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1  MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPL 86
           MQ T+ RY ++T+  ++ + D  +
Sbjct: 61 DMQKTIERYRKYTKDHETSNHDSQI 85

[Close]
BLAST of Cucsat.G1081 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-24
Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEF-SS 60
          MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFS RGKLYEF SS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61 SSMQATVGRYLRHTRSDQSHH 81
          SS+  TV RY +  +   S+H
Sbjct: 61 SSIPKTVERYQKRIQDLGSNH 81

[Close]
BLAST of Cucsat.G1081 vs. NCBI nr
Match: XP_031737728.1 (MADS-box protein SOC1 isoform X2 [Cucumis sativus])

HSP 1 Score: 185 bits (469), Expect = 5.42e-57
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ
Sbjct: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95

[Close]
BLAST of Cucsat.G1081 vs. NCBI nr
Match: XP_004133895.1 (MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical protein Csa_010330 [Cucumis sativus])

HSP 1 Score: 185 bits (469), Expect = 8.35e-57
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ
Sbjct: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95

[Close]
BLAST of Cucsat.G1081 vs. NCBI nr
Match: XP_008438120.1 (PREDICTED: MADS-box protein SOC1-like isoform X3 [Cucumis melo])

HSP 1 Score: 165 bits (417), Expect = 2.88e-49
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ
Sbjct: 61 SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQ 95

[Close]
BLAST of Cucsat.G1081 vs. NCBI nr
Match: XP_008438119.1 (PREDICTED: MADS-box protein SOC1-like isoform X2 [Cucumis melo])

HSP 1 Score: 165 bits (417), Expect = 4.39e-49
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ
Sbjct: 61 SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQ 95

[Close]
BLAST of Cucsat.G1081 vs. NCBI nr
Match: XP_008438118.1 (PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo] >XP_016898941.1 PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo])

HSP 1 Score: 165 bits (417), Expect = 6.66e-49
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ
Sbjct: 61 SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQ 95

[Close]
BLAST of Cucsat.G1081 vs. ExPASy TrEMBL
Match: A0A1S3AVP8 (MADS-box protein SOC1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.39e-49
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ
Sbjct: 61 SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQ 95

[Close]
BLAST of Cucsat.G1081 vs. ExPASy TrEMBL
Match: A0A1S3AVA0 (MADS-box protein SOC1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 2.13e-49
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ
Sbjct: 61 SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQ 95

[Close]
BLAST of Cucsat.G1081 vs. ExPASy TrEMBL
Match: A0A1S4DSH6 (MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 3.22e-49
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ
Sbjct: 61 SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQ 95

[Close]
BLAST of Cucsat.G1081 vs. ExPASy TrEMBL
Match: A0A6J1D0W1 (MADS-box protein SOC1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016338 PE=4 SV=1)

HSP 1 Score: 151 bits (382), Expect = 6.26e-44
Identity = 82/95 (86.32%), Postives = 88/95 (92.63%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALII+SSRGKLYEF+SS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFASS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATVGRYLRHT+  ++HHL QPL  QH LQ VQ
Sbjct: 61 SMQATVGRYLRHTK--ETHHL-QPLVRQHTLQTVQ 92

[Close]
BLAST of Cucsat.G1081 vs. ExPASy TrEMBL
Match: A0A6J1D177 (MADS-box protein SOC1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016338 PE=4 SV=1)

HSP 1 Score: 151 bits (382), Expect = 6.63e-44
Identity = 82/95 (86.32%), Postives = 88/95 (92.63%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALII+SSRGKLYEF+SS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFASS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQ 95
          SMQATVGRYLRHT+  ++HHL QPL  QH LQ VQ
Sbjct: 61 SMQATVGRYLRHTK--ETHHL-QPLVRQHTLQTVQ 92

[Close]
BLAST of Cucsat.G1081 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 125.6 bits (314), Expect = 2.5e-29
Identity = 63/74 (85.14%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE++LIIFS +GKLYEF+SS
Sbjct: 1  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61 SMQATVGRYLRHTR 75
          +MQ T+ RYLRHT+
Sbjct: 61 NMQDTIDRYLRHTK 74

[Close]
BLAST of Cucsat.G1081 vs. TAIR 10
Match: AT4G22950.1 (AGAMOUS-like 19 )

HSP 1 Score: 117.5 bits (293), Expect = 6.9e-27
Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+AL+IFS R KLYEFSSS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHH 81
          S+ AT+ RY R  +   ++H
Sbjct: 61 SIAATIERYQRRIKEIGNNH 80

[Close]
BLAST of Cucsat.G1081 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1  MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPL 86
           MQ T+ RY ++T+  ++ + D  +
Sbjct: 61 DMQKTIERYRKYTKDHETSNHDSQI 85

[Close]
BLAST of Cucsat.G1081 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1  MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPL 86
           MQ T+ RY ++T+  ++ + D  +
Sbjct: 61 DMQKTIERYRKYTKDHETSNHDSQI 85

[Close]
BLAST of Cucsat.G1081 vs. TAIR 10
Match: AT5G62165.3 (AGAMOUS-like 42 )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0 

Query: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
          MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1  MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61 SMQATVGRYLRHTRSDQSHHLDQPL 86
           MQ T+ RY ++T+  ++ + D  +
Sbjct: 61 DMQKTIERYRKYTKDHETSNHDSQI 85

The following BLAST results are available for this feature:
BLAST of Cucsat.G1081 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O646453.5e-2885.14MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1[more]
O827439.6e-2676.25Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=... [more]
Q9XJ601.6e-2577.63MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
Q9FIS12.1e-2568.24MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1[more]
Q388381.8e-2477.78Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=... [more]
BLAST of Cucsat.G1081 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031737728.15.42e-57100.00MADS-box protein SOC1 isoform X2 [Cucumis sativus][more]
XP_004133895.18.35e-57100.00MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical prot... [more]
XP_008438120.12.88e-4991.58PREDICTED: MADS-box protein SOC1-like isoform X3 [Cucumis melo][more]
XP_008438119.14.39e-4991.58PREDICTED: MADS-box protein SOC1-like isoform X2 [Cucumis melo][more]
XP_008438118.16.66e-4991.58PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo] >XP_016898941.1 ... [more]
BLAST of Cucsat.G1081 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AVP81.39e-4991.58MADS-box protein SOC1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483321 PE... [more]
A0A1S3AVA02.13e-4991.58MADS-box protein SOC1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483321 PE... [more]
A0A1S4DSH63.22e-4991.58MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE... [more]
A0A6J1D0W16.26e-4486.32MADS-box protein SOC1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1D1776.63e-4486.32MADS-box protein SOC1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101... [more]
BLAST of Cucsat.G1081 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45660.12.5e-2985.14AGAMOUS-like 20 [more]
AT4G22950.16.9e-2776.25AGAMOUS-like 19 [more]
AT5G62165.11.5e-2668.24AGAMOUS-like 42 [more]
AT5G62165.21.5e-2668.24AGAMOUS-like 42 [more]
AT5G62165.31.5e-2668.24AGAMOUS-like 42 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 65.73
coord: 3..23
score: 63.49
coord: 23..38
score: 83.07
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 1.6E-39
score: 147.3
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 1.0E-25
score: 89.0
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 31.622824
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 13..90
e-value: 9.1E-30
score: 104.6
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 3..86
NoneNo IPR availablePANTHERPTHR11945:SF341MADS-BOX PROTEIN SOC1coord: 1..83
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..83
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 3..78
e-value: 2.60085E-45
score: 139.224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G1081.T5Cucsat.G1081.T5mRNA
Cucsat.G1081.T7Cucsat.G1081.T7mRNA
Cucsat.G1081.T2Cucsat.G1081.T2mRNA
Cucsat.G1081.T8Cucsat.G1081.T8mRNA
Cucsat.G1081.T1Cucsat.G1081.T1mRNA
Cucsat.G1081.T6Cucsat.G1081.T6mRNA
Cucsat.G1081.T3Cucsat.G1081.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding